AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene000506

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000506.t1 MTR_3g053920 38.079 302 116 4 8 305 3 237 3.71e-63 211
MS.gene000506.t1 MTR_2g061500 54.331 127 58 0 8 134 3 129 4.12e-44 155
MS.gene000506.t1 MTR_6g033215 33.529 170 111 1 36 203 124 293 3.98e-32 126
MS.gene000506.t1 MTR_8g006720 50.000 126 28 2 549 639 1 126 5.27e-32 125
MS.gene000506.t1 MTR_0010s0370 38.926 149 87 2 37 182 30 177 1.83e-30 118
MS.gene000506.t1 MTR_0010s0350 38.926 149 87 2 37 182 30 177 1.83e-30 118
MS.gene000506.t1 MTR_4g103530 55.056 89 40 0 64 152 5 93 6.82e-30 117
MS.gene000506.t1 MTR_8g028510 36.646 161 68 3 516 659 60 203 4.30e-26 107
MS.gene000506.t1 MTR_7g011710 46.847 111 50 1 60 161 1 111 1.23e-25 103
MS.gene000506.t1 MTR_6g033560 49.074 108 38 2 528 618 83 190 6.97e-24 105
MS.gene000506.t1 MTR_1g046130 45.977 87 46 1 579 665 1 86 1.05e-21 98.2
MS.gene000506.t1 MTR_7g451250 66.129 62 21 0 605 666 1 62 2.96e-21 92.8
MS.gene000506.t1 MTR_1g100687 46.316 95 50 1 411 504 127 221 1.24e-19 89.0
MS.gene000506.t1 MTR_1g096730 40.659 91 54 0 575 665 18 108 1.78e-18 84.0
MS.gene000506.t1 MTR_4g020630 41.739 115 63 3 398 508 109 223 1.80e-18 89.4
MS.gene000506.t1 MTR_4g094272 70.000 50 15 0 601 650 2 51 2.26e-18 82.4
MS.gene000506.t1 MTR_0015s0120 29.464 224 124 6 443 632 17 240 1.06e-17 85.9
MS.gene000506.t1 MTR_6g034215 38.655 119 69 2 394 508 173 291 1.11e-17 85.1
MS.gene000506.t1 MTR_8g463110 43.434 99 55 1 411 508 189 287 1.98e-17 86.7
MS.gene000506.t1 MTR_7g056813 40.000 115 38 1 545 628 225 339 7.47e-17 83.6
MS.gene000506.t1 MTR_7g028230 33.333 159 55 4 516 666 15 130 9.41e-15 73.2
MS.gene000506.t1 MTR_2g084625 51.807 83 32 3 493 567 246 328 1.08e-13 73.2
MS.gene000506.t1 MTR_7g093920 56.863 51 22 0 579 629 1 51 1.23e-13 66.2
MS.gene000506.t1 MTR_0607s0040 54.545 55 25 0 612 666 1 55 2.38e-13 69.7
MS.gene000506.t1 MTR_1g051330 32.773 119 73 1 411 522 344 462 2.98e-13 73.6
MS.gene000506.t1 MTR_3g044860 29.412 153 69 4 414 553 84 210 3.35e-13 71.2
MS.gene000506.t1 MTR_6g009010 51.471 68 32 1 411 477 196 263 3.40e-13 70.9
MS.gene000506.t1 MTR_1g036720 35.897 78 50 0 41 118 34 111 1.25e-12 65.1
MS.gene000506.t1 MTR_1g069475 55.000 60 24 1 591 647 29 88 1.43e-12 68.6
MS.gene000506.t1 MTR_4g008360 30.973 113 43 1 526 603 31 143 1.92e-12 68.6
MS.gene000506.t1 MTR_7g066610 60.465 43 17 0 528 570 79 121 2.26e-12 64.7
MS.gene000506.t1 MTR_7g045850 43.023 86 30 2 549 634 1 67 4.17e-12 62.4
MS.gene000506.t1 MTR_7g089990 37.963 108 63 2 111 214 86 193 7.27e-12 65.9
MS.gene000506.t1 MTR_6g029540 49.153 59 27 1 571 629 22 77 1.52e-11 60.8
MS.gene000506.t1 MTR_0042s0130 32.673 101 67 1 411 510 228 328 4.77e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000506.t1 AT4G29090 42.683 82 47 0 585 666 29 110 7.24e-18 88.2
MS.gene000506.t1 AT5G36228 24.359 156 114 2 78 231 76 229 1.33e-13 73.2

Find 201 sgRNAs with CRISPR-Local

Find 423 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGCTATTGGGGCATATTT+TGG 0.185679 3.2:-38114613 MS.gene000506:CDS
TACGACAGAGTTGGAAAATT+TGG 0.192106 3.2:-38113068 MS.gene000506:intron
ATCCTGAAGGCTGGGCTAAT+TGG 0.238373 3.2:-38114099 MS.gene000506:CDS
CATCGAGACGATGGTTAAAT+TGG 0.243511 3.2:+38114800 None:intergenic
CGTAACGACGCTAGCTGTTC+GGG 0.245382 3.2:+38112752 None:intergenic
CAGGTTCACAATCTTCCATT+TGG 0.260197 3.2:-38114658 MS.gene000506:CDS
CCATGCCACCGTAACTCTTA+TGG 0.285853 3.2:+38111157 None:intergenic
AGAAACAAACAGGCAACTTT+TGG 0.287629 3.2:-38111423 MS.gene000506:CDS
CCCCGTGTTGCTCAAGCTAT+TGG 0.288689 3.2:-38114625 MS.gene000506:CDS
TGGTTAAGTGCTACGTCATT+AGG 0.296349 3.2:+38114697 None:intergenic
AGTGAGGATCCGTTGTTTGC+TGG 0.299867 3.2:-38114043 MS.gene000506:CDS
CAATTCTGCCTGCTGCTAAA+AGG 0.313019 3.2:-38114834 MS.gene000506:CDS
CATTCAATGTTGAGATTCAT+TGG 0.316693 3.2:+38115024 None:intergenic
TGTGCCTGTGGCTGAATTAA+TGG 0.320298 3.2:-38113852 MS.gene000506:CDS
GGATCTTAAGACCCGGCTTA+TGG 0.324869 3.2:-38114128 MS.gene000506:CDS
CCCGTGTTGCTCAAGCTATT+GGG 0.329124 3.2:-38114624 MS.gene000506:CDS
GTGGCTGAATTAATGGATAC+TGG 0.330387 3.2:-38113845 MS.gene000506:CDS
GTTGAGATTCATTGGTGATT+TGG 0.333047 3.2:+38115032 None:intergenic
AAAGAATAATAAACGCATTC+AGG 0.335136 3.2:-38111242 MS.gene000506:CDS
CACTTAACCATCTGGACATA+TGG 0.364122 3.2:-38114684 MS.gene000506:CDS
TCTGGCAGCGCATTCATTCT+TGG 0.365477 3.2:-38111383 MS.gene000506:CDS
AGGTTCACAATCTTCCATTT+GGG 0.365864 3.2:-38114657 MS.gene000506:CDS
GCGAAAGGCTGGGCAATCTT+TGG 0.372719 3.2:-38114876 MS.gene000506:CDS
TTGAGATTCATTGGTGATTT+GGG 0.373028 3.2:+38115033 None:intergenic
GGCATAGAGGAGCAACTAAC+CGG 0.377156 3.2:-38111215 MS.gene000506:CDS
GTACTACCAGACACTGCATT+TGG 0.379021 3.2:+38114208 None:intergenic
TGCTTATCTGAGCGAAAGGC+TGG 0.381000 3.2:-38114887 MS.gene000506:CDS
TGCTGCTGGTCATGGCTTTG+AGG 0.382021 3.2:-38113942 MS.gene000506:CDS
GGAGTCGACATAATTGTAAC+AGG 0.384474 3.2:-38112844 MS.gene000506:CDS
AACGGAGCACTATGTTGTTC+AGG 0.387211 3.2:+38114250 None:intergenic
CTGTTTGTTTCTACCAATCA+TGG 0.392646 3.2:+38111434 None:intergenic
GTGAGGATCCGTTGTTTGCT+GGG 0.399207 3.2:-38114042 MS.gene000506:CDS
GATATATTAAGGATCGAATC+TGG 0.399890 3.2:-38111401 MS.gene000506:CDS
TGGATGCATAAGGGTATTGC+TGG 0.400354 3.2:-38114079 MS.gene000506:CDS
TCAACCACATCTCTAAATCT+AGG 0.403513 3.2:+38112941 None:intergenic
CTGGGCTAATTGGATGCATA+AGG 0.415421 3.2:-38114089 MS.gene000506:CDS
ACGTAACGACGCTAGCTGTT+CGG 0.415497 3.2:+38112751 None:intergenic
ATTCTCGACCACTGTCTGAT+TGG 0.415752 3.2:-38114940 MS.gene000506:CDS
GGTTAAGTGCTACGTCATTA+GGG 0.424109 3.2:+38114698 None:intergenic
CGAGTCTGAAACCATCTTCT+CGG 0.424694 3.2:-38114336 MS.gene000506:CDS
CCTCGGGACAGGCAAATACT+TGG 0.426851 3.2:-38111466 MS.gene000506:CDS
CAACTAACCGGGGACTTCAT+TGG 0.427138 3.2:-38111203 MS.gene000506:CDS
ACAATTATGTCGACTCCAAT+TGG 0.427538 3.2:+38112850 None:intergenic
TGGAGGCTGATCCTGAAGGC+TGG 0.429230 3.2:-38114108 MS.gene000506:CDS
GGCACACCCTCTTCAGCAAT+TGG 0.429557 3.2:+38113869 None:intergenic
ATCTTTGGCAACCAGTGAAA+GGG 0.429785 3.2:-38114861 MS.gene000506:CDS
TGTGAACTTTCAGCATCATA+AGG 0.441779 3.2:+38114548 None:intergenic
ATCATCTGCTGGAAAACATC+TGG 0.444535 3.2:-38114014 MS.gene000506:CDS
GAATATGCTGCTGCTGGTCA+TGG 0.447735 3.2:-38113950 MS.gene000506:CDS
TTGACAGCAGCTCGTGTAAA+CGG 0.449393 3.2:+38114232 None:intergenic
GACTCTAATGATGGTGTAAG+AGG 0.453551 3.2:-38114367 MS.gene000506:CDS
TAGGTACTGCTGCAACCAAT+AGG 0.454373 3.2:-38114309 MS.gene000506:CDS
TGACAACAAAGTTGAAGAAA+AGG 0.455551 3.2:-38113916 MS.gene000506:CDS
ACCATGCTTACACAAATTCT+CGG 0.455810 3.2:-38111501 MS.gene000506:CDS
GAATGGCTCACTTTGGAAGA+AGG 0.457247 3.2:-38115006 MS.gene000506:CDS
CAACATTGAATGGCTCACTT+TGG 0.457514 3.2:-38115013 MS.gene000506:CDS
ATCCAATTAGCCCAGCCTTC+AGG 0.458728 3.2:+38114097 None:intergenic
TCGACCACTGTCTGATTGGA+CGG 0.458952 3.2:-38114936 MS.gene000506:CDS
GGGGACTTCATTGGCTGTCA+TGG 0.459308 3.2:-38111194 MS.gene000506:CDS
CTCGGCGTGCAAGCAGTCCT+CGG 0.461518 3.2:-38111483 MS.gene000506:CDS
AGGATCACGCAGCCACCTAT+TGG 0.463715 3.2:+38114294 None:intergenic
CGCTTCTCCAATTGCTGAAG+AGG 0.464177 3.2:-38113876 MS.gene000506:CDS
GCACTAGTCTGAGCAGAATA+GGG 0.466040 3.2:+38113023 None:intergenic
CATGATTGGTAGAAACAAAC+AGG 0.466162 3.2:-38111433 MS.gene000506:CDS
CAATGAATCTCAACATTGAA+TGG 0.467302 3.2:-38115023 MS.gene000506:CDS
CAGCAGCATCAGTGTTCTCC+AGG 0.468371 3.2:+38114968 None:intergenic
TGCAGTTCGTTCTGAAATCA+AGG 0.470072 3.2:-38114149 MS.gene000506:CDS
GCATAAGGGTATTGCTGGAC+AGG 0.475645 3.2:-38114074 MS.gene000506:CDS
GTGCAGGTGATTTAACCAAT+TGG 0.477368 3.2:-38112865 MS.gene000506:CDS
CTATGCTTGGTAAACAAGCT+TGG 0.477439 3.2:-38111104 MS.gene000506:CDS
CAGGATCAGCCTCCATAAGC+CGG 0.477526 3.2:+38114116 None:intergenic
TGACGTAGCACTTAACCATC+TGG 0.478536 3.2:-38114692 MS.gene000506:CDS
TGCTGGAAAACATCTGGTGT+TGG 0.479589 3.2:-38114008 MS.gene000506:CDS
GTACCTAGTTTCCGAGAAGA+TGG 0.482783 3.2:+38114325 None:intergenic
GCCGCCAACGTGATGAAGGA+TGG 0.482989 3.2:-38114778 MS.gene000506:CDS
TGAGGGCTCGTAATAGTGAA+TGG 0.484917 3.2:-38114489 MS.gene000506:CDS
CGTACACCACGTATAACTTT+CGG 0.485449 3.2:+38113001 None:intergenic
TCTTTAAGTACGAAAGGCTC+TGG 0.489697 3.2:-38114456 MS.gene000506:CDS
TTACGGTGGCATGGGATTCA+AGG 0.490773 3.2:-38111148 MS.gene000506:CDS
CATTTAAGTATGAAAATGCT+TGG 0.491372 3.2:-38112973 MS.gene000506:CDS
GGCACTAGTCTGAGCAGAAT+AGG 0.494669 3.2:+38113022 None:intergenic
TTGGGGCTACCCTCCATGAT+TGG 0.494785 3.2:-38111447 MS.gene000506:CDS
TCGGCGTGCAAGCAGTCCTC+GGG 0.495669 3.2:-38111482 MS.gene000506:CDS
TGTCACACAACCGCTCAAAC+AGG 0.495763 3.2:-38114521 MS.gene000506:CDS
CCCAATAGCTTGAGCAACAC+GGG 0.496294 3.2:+38114624 None:intergenic
AAATTTGGTTTCTCATTCGT+CGG 0.499637 3.2:-38113053 MS.gene000506:CDS
CGGGGTTGAATGAACCCAAA+TGG 0.501768 3.2:+38114643 None:intergenic
AAACCATCTTCTCGGAAACT+AGG 0.502168 3.2:-38114328 MS.gene000506:CDS
GCTCTTGAATATGCTGCTGC+TGG 0.502806 3.2:-38113956 MS.gene000506:CDS
GTGCAAGCAGTCCTCGGGAC+AGG 0.503837 3.2:-38111477 MS.gene000506:CDS
GGATCCGTTGTTTGCTGGGG+CGG 0.506093 3.2:-38114038 MS.gene000506:CDS
CGACCACTGTCTGATTGGAC+GGG 0.510608 3.2:-38114935 MS.gene000506:CDS
AGAATTGTAACCCCTTTCAC+TGG 0.510742 3.2:+38114850 None:intergenic
GCTGGGGCGGAATCATCTGC+TGG 0.511566 3.2:-38114025 MS.gene000506:CDS
GAGATGTGGTTGAAACTAGC+TGG 0.512469 3.2:-38112931 MS.gene000506:CDS
CGATGCCGCCAACGTGATGA+AGG 0.513585 3.2:-38114782 MS.gene000506:CDS
GCTGGAAAACATCTGGTGTT+GGG 0.514154 3.2:-38114007 MS.gene000506:CDS
ACTGAGATGGTTATCCTTGG+TGG 0.514198 3.2:-38114181 MS.gene000506:CDS
CTCGGGACAGGCAAATACTT+GGG 0.514586 3.2:-38111465 MS.gene000506:CDS
CCCATCCTTCATCACGTTGG+CGG 0.518243 3.2:+38114777 None:intergenic
GTGAACTTTCAGCATCATAA+GGG 0.519257 3.2:+38114549 None:intergenic
CCATAAGAGTTACGGTGGCA+TGG 0.519690 3.2:-38111157 MS.gene000506:CDS
TGGCTGAATTAATGGATACT+GGG 0.522184 3.2:-38113844 MS.gene000506:CDS
AATGGCTCACTTTGGAAGAA+GGG 0.522722 3.2:-38115005 MS.gene000506:CDS
CATAAGAGTTACGGTGGCAT+GGG 0.523282 3.2:-38111156 MS.gene000506:CDS
CTAATGATGGTGTAAGAGGA+TGG 0.525598 3.2:-38114363 MS.gene000506:CDS
TGTGACAGAGGCGACTAGCT+TGG 0.526204 3.2:-38111076 MS.gene000506:CDS
AATCTTTGGCAACCAGTGAA+AGG 0.527586 3.2:-38114862 MS.gene000506:CDS
GTCAATCCAAATGCAGTGTC+TGG 0.527785 3.2:-38114214 MS.gene000506:CDS
GCATAGAGGAGCAACTAACC+GGG 0.528217 3.2:-38111214 MS.gene000506:CDS
GTTACAATTATCATACAGCC+AGG 0.528284 3.2:+38114753 None:intergenic
ACTTAACCATCTGGACATAT+GGG 0.528553 3.2:-38114683 MS.gene000506:CDS
AATAATAAACGCATTCAGGT+GGG 0.529525 3.2:-38111238 MS.gene000506:CDS
TTGTCGGTCCATAAGAGTTA+CGG 0.529678 3.2:-38111165 MS.gene000506:CDS
GATACTGGGGAAGGGAACTT+AGG 0.532496 3.2:-38113830 MS.gene000506:intron
CCATCTGGACATATGGGTGC+AGG 0.534929 3.2:-38114677 MS.gene000506:CDS
ACCTTCCAGTCCTGTTTGAG+CGG 0.538793 3.2:+38114511 None:intergenic
TAATAAACGCATTCAGGTGG+GGG 0.540463 3.2:-38111236 MS.gene000506:CDS
TGACAGAATCACTCCTGGTA+TGG 0.542060 3.2:-38114722 MS.gene000506:CDS
GGGACTTCATTGGCTGTCAT+GGG 0.542342 3.2:-38111193 MS.gene000506:CDS
ATACTACGCTAGACATAGCT+CGG 0.543996 3.2:+38110985 None:intergenic
ACGTGATGAAGGATGGGCCC+TGG 0.545386 3.2:-38114771 MS.gene000506:CDS
CCTGCACATGCCTCTAGTCT+AGG 0.547231 3.2:+38112881 None:intergenic
TGCTGAAGAGGGTGTGCCTG+TGG 0.549326 3.2:-38113864 MS.gene000506:CDS
ACATAATTGTAACAGGTTGA+AGG 0.549812 3.2:-38112837 MS.gene000506:CDS
GAGGGCTCGTAATAGTGAAT+GGG 0.550422 3.2:-38114488 MS.gene000506:CDS
CACAACCGCTCAAACAGGAC+TGG 0.550461 3.2:-38114516 MS.gene000506:CDS
GGAGGCTGATCCTGAAGGCT+GGG 0.553743 3.2:-38114107 MS.gene000506:CDS
ATAATAAACGCATTCAGGTG+GGG 0.556733 3.2:-38111237 MS.gene000506:CDS
CCGCCAACGTGATGAAGGAT+GGG 0.557788 3.2:-38114777 MS.gene000506:CDS
GCTGTCATGGGAAAAGTTGT+CGG 0.557833 3.2:-38111181 MS.gene000506:CDS
AGGATCAGCCTCCATAAGCC+GGG 0.558544 3.2:+38114117 None:intergenic
TGAGGATCCGTTGTTTGCTG+GGG 0.559280 3.2:-38114041 MS.gene000506:CDS
TGAAATTGAAACATGTCGTA+AGG 0.561780 3.2:-38112813 MS.gene000506:CDS
CCGTGTTGCTCAAGCTATTG+GGG 0.562015 3.2:-38114623 MS.gene000506:CDS
CTATGTTGTTCAGGAATCAC+CGG 0.567921 3.2:+38114259 None:intergenic
GAATAATAAACGCATTCAGG+TGG 0.568501 3.2:-38111239 MS.gene000506:CDS
TGGGCTAATTGGATGCATAA+GGG 0.568817 3.2:-38114088 MS.gene000506:CDS
CCCCAATAGCTTGAGCAACA+CGG 0.569454 3.2:+38114623 None:intergenic
ACTACTGAGATGGTTATCCT+TGG 0.570382 3.2:-38114184 MS.gene000506:CDS
GGTGTTGGGAATGAGTGCGC+AGG 0.574394 3.2:-38113993 MS.gene000506:CDS
GTGGTTGACAGAATCACTCC+TGG 0.576024 3.2:-38114727 MS.gene000506:CDS
GCTTATCTGAGCGAAAGGCT+GGG 0.577274 3.2:-38114886 MS.gene000506:CDS
GAGTGATTCTGTCAACCACC+AGG 0.578421 3.2:+38114731 None:intergenic
ACGCTAGACATAGCTCGGGT+TGG 0.581389 3.2:+38110990 None:intergenic
CAGTTGTCTTTAAGTACGAA+AGG 0.581600 3.2:-38114462 MS.gene000506:CDS
CGGGGTCACAAGCTTGACCT+CGG 0.581818 3.2:+38112771 None:intergenic
TTTGAGAAGGACTCTAATGA+TGG 0.581969 3.2:-38114376 MS.gene000506:CDS
CCTAGACTAGAGGCATGTGC+AGG 0.582144 3.2:-38112881 MS.gene000506:CDS
GTATCCATTAATTCAGCCAC+AGG 0.586540 3.2:+38113848 None:intergenic
GCCGAGAATTTGTGTAAGCA+TGG 0.586630 3.2:+38111500 None:intergenic
AAGCATAGCAGCGTTAAAAG+AGG 0.588689 3.2:+38111119 None:intergenic
ATGGCTCACTTTGGAAGAAG+GGG 0.590141 3.2:-38115004 MS.gene000506:CDS
TCAAACAGGACTGGAAGGTG+AGG 0.590979 3.2:-38114507 MS.gene000506:CDS
GAATTAATGGATACTGGGGA+AGG 0.596535 3.2:-38113839 MS.gene000506:CDS
CCTGCACCCATATGTCCAGA+TGG 0.596797 3.2:+38114677 None:intergenic
ACGTCATTAGGGACCATACC+AGG 0.600792 3.2:+38114709 None:intergenic
ACCGCTCAAACAGGACTGGA+AGG 0.603380 3.2:-38114512 MS.gene000506:CDS
TGATTTGGGATCCGCAGACA+TGG 0.604781 3.2:+38115047 None:intergenic
ATGACAGCCAATGAAGTCCC+CGG 0.606068 3.2:+38111196 None:intergenic
CTTATGGAGGCTGATCCTGA+AGG 0.607948 3.2:-38114112 MS.gene000506:CDS
TGATCCTGTGAAGAGTGAAC+CGG 0.608582 3.2:-38114278 MS.gene000506:CDS
GCTTCTCCAATTGCTGAAGA+GGG 0.613116 3.2:-38113875 MS.gene000506:CDS
TGGTAGTACTACTACTGAGA+TGG 0.614880 3.2:-38114194 MS.gene000506:CDS
TCTTTGGCAACCAGTGAAAG+GGG 0.618630 3.2:-38114860 MS.gene000506:CDS
TCGGGACAGGCAAATACTTG+GGG 0.620098 3.2:-38111464 MS.gene000506:CDS
TCTTAAGACCCGGCTTATGG+AGG 0.620308 3.2:-38114125 MS.gene000506:CDS
AGCTTGGAAATTTGTGACAG+AGG 0.621996 3.2:-38111088 MS.gene000506:CDS
TACTACGCTAGACATAGCTC+GGG 0.624089 3.2:+38110986 None:intergenic
ATCACCGGTTCACTCTTCAC+AGG 0.629151 3.2:+38114274 None:intergenic
CAAACAGGACTGGAAGGTGA+GGG 0.633749 3.2:-38114506 MS.gene000506:CDS
AGAACCTAGATTTAGAGATG+TGG 0.635424 3.2:-38112945 MS.gene000506:CDS
TTCAATCCCTACCATGTCTG+CGG 0.639085 3.2:-38115058 None:intergenic
TTTGTTTCTACCAATCATGG+AGG 0.642101 3.2:+38111437 None:intergenic
TTGTTTCTACCAATCATGGA+GGG 0.642479 3.2:+38111438 None:intergenic
TAATGATGGTGTAAGAGGAT+GGG 0.643189 3.2:-38114362 MS.gene000506:CDS
GGGCCCATCCTTCATCACGT+TGG 0.645810 3.2:+38114774 None:intergenic
GTGTTGGGAATGAGTGCGCA+GGG 0.646299 3.2:-38113992 MS.gene000506:CDS
AATTAATGGATACTGGGGAA+GGG 0.646578 3.2:-38113838 MS.gene000506:CDS
CCAAGTATTTGCCTGTCCCG+AGG 0.652434 3.2:+38111466 None:intergenic
GCTGTATGATAATTGTAACC+TGG 0.652980 3.2:-38114749 MS.gene000506:CDS
GTACTGCTGCAACCAATAGG+TGG 0.655972 3.2:-38114306 MS.gene000506:CDS
CGTTGGCGGCATCGAGACGA+TGG 0.656533 3.2:+38114791 None:intergenic
GATTCCGCCCCAGCAAACAA+CGG 0.659452 3.2:+38114034 None:intergenic
AAATCAAGGATCTTAAGACC+CGG 0.661402 3.2:-38114135 MS.gene000506:CDS
TGGACGGGTTCTCACTGACA+AGG 0.671477 3.2:-38114920 MS.gene000506:CDS
CATAGAGGAGCAACTAACCG+GGG 0.675514 3.2:-38111213 MS.gene000506:CDS
TGGCTCACTTTGGAAGAAGG+GGG 0.679500 3.2:-38115003 MS.gene000506:CDS
TGGACAGGCTACACAGAGTG+AGG 0.680613 3.2:-38114059 MS.gene000506:CDS
TGATGTCATACCTAGACTAG+AGG 0.682725 3.2:-38112891 MS.gene000506:CDS
TTACAATTATCATACAGCCA+GGG 0.692222 3.2:+38114754 None:intergenic
TCGGTCCATAAGAGTTACGG+TGG 0.693371 3.2:-38111162 MS.gene000506:CDS
GGCTGAATTAATGGATACTG+GGG 0.699613 3.2:-38113843 MS.gene000506:CDS
TTGACTGATTGTCGTAACCG+AGG 0.701273 3.2:-38112788 MS.gene000506:CDS
CCAATAGCTTGAGCAACACG+GGG 0.702702 3.2:+38114625 None:intergenic
GTATGATAATTGTAACCTGG+TGG 0.702924 3.2:-38114746 MS.gene000506:CDS
CTGCAGTGATACGTCCACCA+AGG 0.709414 3.2:+38114167 None:intergenic
GTAACGACGCTAGCTGTTCG+GGG 0.714917 3.2:+38112753 None:intergenic
ACGGGTTCTCACTGACAAGG+AGG 0.715808 3.2:-38114917 MS.gene000506:CDS
CTAGTGCCGAAAGTTATACG+TGG 0.728686 3.2:-38113007 MS.gene000506:CDS
GAACCCGTCCAATCAGACAG+TGG 0.751320 3.2:+38114932 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATTCATCTATTTGAAA+AGG + chr3.2:38113622-38113641 None:intergenic 15.0%
!! TTCATTATATGAAAACAAAT+AGG - chr3.2:38114010-38114029 MS.gene000506:CDS 15.0%
!!! ATGATTGTTTTCTATTTTTT+AGG - chr3.2:38114388-38114407 MS.gene000506:CDS 15.0%
!!! TGATTGTTTTCTATTTTTTA+GGG - chr3.2:38114389-38114408 MS.gene000506:CDS 15.0%
!! ATGTAATATACTTCAGATTT+GGG + chr3.2:38114492-38114511 None:intergenic 20.0%
!! ATTATATGAAAACAAATAGG+AGG - chr3.2:38114013-38114032 MS.gene000506:CDS 20.0%
!! TAATACAGGATGATAATTAT+TGG - chr3.2:38113329-38113348 MS.gene000506:intron 20.0%
!!! ATTTGCTAAAAATGATGTAA+CGG - chr3.2:38112285-38112304 MS.gene000506:intron 20.0%
!!! GTTGTATAAATTAGTTTCTA+AGG - chr3.2:38113876-38113895 MS.gene000506:CDS 20.0%
! AAAGAATAATAAACGCATTC+AGG - chr3.2:38114796-38114815 MS.gene000506:CDS 25.0%
! AATTACAGTACAATTGAAAG+AGG + chr3.2:38112562-38112581 None:intergenic 25.0%
! ATGTGAAAAATTGTTTGAGA+AGG - chr3.2:38111649-38111668 MS.gene000506:intron 25.0%
! ATTCACATGGTTTAAAAGTA+TGG - chr3.2:38112877-38112896 MS.gene000506:CDS 25.0%
! ATTTGAAAGAAGTAATGTTG+AGG - chr3.2:38114103-38114122 MS.gene000506:CDS 25.0%
! CATTTAAGTATGAAAATGCT+TGG - chr3.2:38113065-38113084 MS.gene000506:intron 25.0%
! GATGAATCAATTGTTAATAC+AGG - chr3.2:38113315-38113334 MS.gene000506:intron 25.0%
! GATGTAATATACTTCAGATT+TGG + chr3.2:38114493-38114512 None:intergenic 25.0%
! TCAGAAAGAAATAAAACATC+TGG + chr3.2:38112426-38112445 None:intergenic 25.0%
! TGAAATATTAGTGGAGTTTA+AGG + chr3.2:38113791-38113810 None:intergenic 25.0%
! TGTAATATACTTCAGATTTG+GGG + chr3.2:38114491-38114510 None:intergenic 25.0%
! TTGGTTAATAATAACTTGGT+CGG - chr3.2:38114192-38114211 MS.gene000506:CDS 25.0%
!! ATACTTTTAAACCATGTGAA+TGG + chr3.2:38112878-38112897 None:intergenic 25.0%
!! CAAACAATTTTTCACATGTA+CGG + chr3.2:38111646-38111665 None:intergenic 25.0%
!! GTATTAACAATTGATTCATC+TGG + chr3.2:38113315-38113334 None:intergenic 25.0%
!! TACTTTTAAACCATGTGAAT+GGG + chr3.2:38112877-38112896 None:intergenic 25.0%
!! TGGATGTAAAGCATTAATTA+GGG + chr3.2:38113563-38113582 None:intergenic 25.0%
!! TTCACATGGTTTAAAAGTAT+GGG - chr3.2:38112878-38112897 MS.gene000506:CDS 25.0%
!!! AAAAGCTTCACTTTTATTAG+AGG + chr3.2:38112460-38112479 None:intergenic 25.0%
!!! AGTGTTGGTTAATAATAACT+TGG - chr3.2:38114188-38114207 MS.gene000506:CDS 25.0%
AAAGTTCATTGGTATTAGGA+TGG - chr3.2:38113364-38113383 MS.gene000506:intron 30.0%
AATAATAAACGCATTCAGGT+GGG - chr3.2:38114800-38114819 MS.gene000506:CDS 30.0%
AATATTTCACTCATTCCGAA+GGG - chr3.2:38113802-38113821 MS.gene000506:intron 30.0%
AATCATTAGCGAACAAAAGA+TGG + chr3.2:38114374-38114393 None:intergenic 30.0%
ATATGAAAACAAATAGGAGG+CGG - chr3.2:38114016-38114035 MS.gene000506:CDS 30.0%
ATATTAGTGGAGTTTAAGGA+TGG + chr3.2:38113787-38113806 None:intergenic 30.0%
ATCATTAGCGAACAAAAGAT+GGG + chr3.2:38114373-38114392 None:intergenic 30.0%
CAATGAATCTCAACATTGAA+TGG - chr3.2:38111015-38111034 MS.gene000506:CDS 30.0%
CACTGATAGGATATGTTTAA+TGG + chr3.2:38114436-38114455 None:intergenic 30.0%
CATTCAATGTTGAGATTCAT+TGG + chr3.2:38111017-38111036 None:intergenic 30.0%
GATATATTAAGGATCGAATC+TGG - chr3.2:38114637-38114656 MS.gene000506:CDS 30.0%
TAATATTTCACTCATTCCGA+AGG - chr3.2:38113801-38113820 MS.gene000506:intron 30.0%
TATTAGTGGAGTTTAAGGAT+GGG + chr3.2:38113786-38113805 None:intergenic 30.0%
TGAAATTGAAACATGTCGTA+AGG - chr3.2:38113225-38113244 MS.gene000506:intron 30.0%
TGAAGTATATTACATCAGTC+CGG - chr3.2:38114497-38114516 MS.gene000506:CDS 30.0%
TGACAACAAAGTTGAAGAAA+AGG - chr3.2:38112122-38112141 MS.gene000506:intron 30.0%
TGCAAAAGTTCATTGGTATT+AGG - chr3.2:38113360-38113379 MS.gene000506:intron 30.0%
TGGTTAATAATAACTTGGTC+GGG - chr3.2:38114193-38114212 MS.gene000506:CDS 30.0%
TTACAATTATCATACAGCCA+GGG + chr3.2:38111287-38111306 None:intergenic 30.0%
TTTATACAACACGTTTCACA+AGG + chr3.2:38113866-38113885 None:intergenic 30.0%
! AAATTTGGTTTCTCATTCGT+CGG - chr3.2:38112985-38113004 MS.gene000506:CDS 30.0%
! ACAGAGAATAAAAAGGTATG+GGG + chr3.2:38114262-38114281 None:intergenic 30.0%
! ACATAATTGTAACAGGTTGA+AGG - chr3.2:38113201-38113220 MS.gene000506:intron 30.0%
! ATAAAAAGGTATGGGGATAA+CGG + chr3.2:38114255-38114274 None:intergenic 30.0%
! ATGTCAACTGTGAAAGTTTT+TGG + chr3.2:38114774-38114793 None:intergenic 30.0%
! CACAGAGAATAAAAAGGTAT+GGG + chr3.2:38114263-38114282 None:intergenic 30.0%
! CTGGATGTAAAGCATTAATT+AGG + chr3.2:38113564-38113583 None:intergenic 30.0%
! GAGCATACTGGTTAATTAAT+TGG - chr3.2:38112796-38112815 MS.gene000506:CDS 30.0%
! GGATGTAAAGCATTAATTAG+GGG + chr3.2:38113562-38113581 None:intergenic 30.0%
! GGCAACTTTTGGATATATTA+AGG - chr3.2:38114626-38114645 MS.gene000506:CDS 30.0%
! TTGAGATTCATTGGTGATTT+GGG + chr3.2:38111008-38111027 None:intergenic 30.0%
!!! GACTTTTTTGACGCAAATAT+TGG - chr3.2:38115023-38115042 MS.gene000506:CDS 30.0%
AAAGAAGTAATGTTGAGGCT+TGG - chr3.2:38114108-38114127 MS.gene000506:CDS 35.0%
AAATCAAGGATCTTAAGACC+CGG - chr3.2:38111903-38111922 MS.gene000506:intron 35.0%
AAGGATTGATTGCGCTTATT+AGG - chr3.2:38114286-38114305 MS.gene000506:CDS 35.0%
AATGCATGGGATTATTTGCA+TGG - chr3.2:38112684-38112703 MS.gene000506:intron 35.0%
ACAACTCCTCAAAATATTCC+CGG + chr3.2:38113513-38113532 None:intergenic 35.0%
ACCATGCTTACACAAATTCT+CGG - chr3.2:38114537-38114556 MS.gene000506:CDS 35.0%
ACTTAACCATCTGGACATAT+GGG - chr3.2:38111355-38111374 MS.gene000506:intron 35.0%
AGAAATGATTGTAGAACTCG+GGG + chr3.2:38113699-38113718 None:intergenic 35.0%
AGAACCTAGATTTAGAGATG+TGG - chr3.2:38113093-38113112 MS.gene000506:intron 35.0%
AGGTTCACAATCTTCCATTT+GGG - chr3.2:38111381-38111400 MS.gene000506:CDS 35.0%
ATAATAAACGCATTCAGGTG+GGG - chr3.2:38114801-38114820 MS.gene000506:CDS 35.0%
ATCAATTCTGGATAATGCGA+TGG - chr3.2:38113972-38113991 MS.gene000506:CDS 35.0%
ATGCATGGGATTATTTGCAT+GGG - chr3.2:38112685-38112704 MS.gene000506:intron 35.0%
ATTAGTGGAGTTTAAGGATG+GGG + chr3.2:38113785-38113804 None:intergenic 35.0%
CAGAAATGATTGTAGAACTC+GGG + chr3.2:38113700-38113719 None:intergenic 35.0%
CAGTTGTCTTTAAGTACGAA+AGG - chr3.2:38111576-38111595 MS.gene000506:intron 35.0%
CATGATTGGTAGAAACAAAC+AGG - chr3.2:38114605-38114624 MS.gene000506:CDS 35.0%
CCAGAAATGATTGTAGAACT+CGG + chr3.2:38113701-38113720 None:intergenic 35.0%
CGGAATGAGTGAAATATTAG+TGG + chr3.2:38113800-38113819 None:intergenic 35.0%
CTTCTGCACAGAGAATAAAA+AGG + chr3.2:38114269-38114288 None:intergenic 35.0%
GAAATGCTCATCACATATGT+CGG + chr3.2:38114744-38114763 None:intergenic 35.0%
GAATAATAAACGCATTCAGG+TGG - chr3.2:38114799-38114818 MS.gene000506:CDS 35.0%
GCACAGAGAATAAAAAGGTA+TGG + chr3.2:38114264-38114283 None:intergenic 35.0%
GCGTGAGGTAATGATTAAAT+CGG - chr3.2:38114704-38114723 MS.gene000506:CDS 35.0%
GCTGTATGATAATTGTAACC+TGG - chr3.2:38111289-38111308 MS.gene000506:intron 35.0%
GTATGATAATTGTAACCTGG+TGG - chr3.2:38111292-38111311 MS.gene000506:intron 35.0%
GTGAACTTTCAGCATCATAA+GGG + chr3.2:38111492-38111511 None:intergenic 35.0%
GTTACAATTATCATACAGCC+AGG + chr3.2:38111288-38111307 None:intergenic 35.0%
TACGACAGAGTTGGAAAATT+TGG - chr3.2:38112970-38112989 MS.gene000506:CDS 35.0%
TCAACCACATCTCTAAATCT+AGG + chr3.2:38113100-38113119 None:intergenic 35.0%
TGTCGTGAGTTCCAAATTAT+CGG + chr3.2:38113599-38113618 None:intergenic 35.0%
TGTGAACTTTCAGCATCATA+AGG + chr3.2:38111493-38111512 None:intergenic 35.0%
TGTTACTGACACCGATAATT+TGG - chr3.2:38113585-38113604 MS.gene000506:intron 35.0%
TTGTTTGAGCATGAGAAATC+TGG - chr3.2:38112762-38112781 MS.gene000506:CDS 35.0%
TTTGAGAAGGACTCTAATGA+TGG - chr3.2:38111662-38111681 MS.gene000506:intron 35.0%
! AAATTTTCCAACTCTGTCGT+AGG + chr3.2:38112971-38112990 None:intergenic 35.0%
! AATTAATGGATACTGGGGAA+GGG - chr3.2:38112200-38112219 MS.gene000506:intron 35.0%
! AATTAATTGGTTCCGACAAG+CGG - chr3.2:38112809-38112828 MS.gene000506:CDS 35.0%
! AATTTTCCAACTCTGTCGTA+GGG + chr3.2:38112970-38112989 None:intergenic 35.0%
! AGAAACAAACAGGCAACTTT+TGG - chr3.2:38114615-38114634 MS.gene000506:CDS 35.0%
! CAAAATTGAAGTACCTAGTG+CGG - chr3.2:38112391-38112410 MS.gene000506:intron 35.0%
! CAATTTTTCACATGTACGGT+CGG + chr3.2:38111642-38111661 None:intergenic 35.0%
! CGTATTGATGATCATGCTAT+GGG - chr3.2:38112609-38112628 MS.gene000506:intron 35.0%
! CTTTTTATTCTCTGTGCAGA+AGG - chr3.2:38114267-38114286 MS.gene000506:CDS 35.0%
! GAAGCTTTTCGTTATATGCT+TGG - chr3.2:38112471-38112490 MS.gene000506:intron 35.0%
! GTTGAGATTCATTGGTGATT+TGG + chr3.2:38111009-38111028 None:intergenic 35.0%
! TAATGATGGTGTAAGAGGAT+GGG - chr3.2:38111676-38111695 MS.gene000506:intron 35.0%
! TCGTATTGATGATCATGCTA+TGG - chr3.2:38112608-38112627 MS.gene000506:intron 35.0%
! TCTGAAGCTTGATATAAGCA+AGG - chr3.2:38114056-38114075 MS.gene000506:CDS 35.0%
! TGGCTGAATTAATGGATACT+GGG - chr3.2:38112194-38112213 MS.gene000506:intron 35.0%
!! ACAATTATGTCGACTCCAAT+TGG + chr3.2:38113191-38113210 None:intergenic 35.0%
!! CTGTTTGTTTCTACCAATCA+TGG + chr3.2:38114607-38114626 None:intergenic 35.0%
!! TATTTTGAGGAGTTGTTCCA+AGG - chr3.2:38113517-38113536 MS.gene000506:intron 35.0%
!! TGTCTTGCTGTTAATAGTAC+TGG - chr3.2:38112504-38112523 MS.gene000506:intron 35.0%
!! TTGCTGTTAATAGTACTGGT+CGG - chr3.2:38112508-38112527 MS.gene000506:intron 35.0%
!! TTGTTTCTACCAATCATGGA+GGG + chr3.2:38114603-38114622 None:intergenic 35.0%
!! TTTGTTTCTACCAATCATGG+AGG + chr3.2:38114604-38114623 None:intergenic 35.0%
!!! AAGAACCTTTTTCAACCTGT+TGG + chr3.2:38113908-38113927 None:intergenic 35.0%
!!! TGGACTTTTTGTTTTGCTTG+TGG - chr3.2:38111602-38111621 MS.gene000506:intron 35.0%
AAACCATCTTCTCGGAAACT+AGG - chr3.2:38111710-38111729 MS.gene000506:intron 40.0%
AACAAAAGATGGGATACCAC+TGG + chr3.2:38114363-38114382 None:intergenic 40.0%
AACACGTTTCACAAGGCAAT+TGG + chr3.2:38113859-38113878 None:intergenic 40.0%
AAGCATAGCAGCGTTAAAAG+AGG + chr3.2:38114922-38114941 None:intergenic 40.0%
AATATATGCTCAGCTGTCCT+TGG + chr3.2:38113537-38113556 None:intergenic 40.0%
AATCTCTCCTCTATAGCTCT+TGG + chr3.2:38112908-38112927 None:intergenic 40.0%
AATCTTTGGCAACCAGTGAA+AGG - chr3.2:38111176-38111195 MS.gene000506:CDS 40.0%
AATTGATCTGCCAGGTACAA+AGG + chr3.2:38113959-38113978 None:intergenic 40.0%
ACATATCCTATCAGTGTACG+AGG - chr3.2:38114440-38114459 MS.gene000506:CDS 40.0%
ACTACTGAGATGGTTATCCT+TGG - chr3.2:38111854-38111873 MS.gene000506:intron 40.0%
AGAATTGTAACCCCTTTCAC+TGG + chr3.2:38111191-38111210 None:intergenic 40.0%
AGCTTGGAAATTTGTGACAG+AGG - chr3.2:38114950-38114969 MS.gene000506:CDS 40.0%
AGGTGTACGATCGAATTGAT+TGG - chr3.2:38114076-38114095 MS.gene000506:CDS 40.0%
AGTAAGTGTCTATTGAAGGC+GGG - chr3.2:38114681-38114700 MS.gene000506:CDS 40.0%
ATCATCTGCTGGAAAACATC+TGG - chr3.2:38112024-38112043 MS.gene000506:intron 40.0%
ATCCGAATGCATAGCAAACA+TGG + chr3.2:38113650-38113669 None:intergenic 40.0%
ATCTTTGGCAACCAGTGAAA+GGG - chr3.2:38111177-38111196 MS.gene000506:CDS 40.0%
ATGGGATTATTTGCATGGGT+TGG - chr3.2:38112689-38112708 MS.gene000506:intron 40.0%
CAACATTGAATGGCTCACTT+TGG - chr3.2:38111025-38111044 MS.gene000506:CDS 40.0%
CAACTCCTCAAAATATTCCC+GGG + chr3.2:38113512-38113531 None:intergenic 40.0%
CACTTAACCATCTGGACATA+TGG - chr3.2:38111354-38111373 MS.gene000506:intron 40.0%
CAGGTTCACAATCTTCCATT+TGG - chr3.2:38111380-38111399 MS.gene000506:CDS 40.0%
CAGTAAGTGTCTATTGAAGG+CGG - chr3.2:38114680-38114699 MS.gene000506:CDS 40.0%
CATCGAGACGATGGTTAAAT+TGG + chr3.2:38111241-38111260 None:intergenic 40.0%
CCGAGTTCTACAATCATTTC+TGG - chr3.2:38113698-38113717 MS.gene000506:intron 40.0%
CGTACACCACGTATAACTTT+CGG + chr3.2:38113040-38113059 None:intergenic 40.0%
CTATGCTTGGTAAACAAGCT+TGG - chr3.2:38114934-38114953 MS.gene000506:CDS 40.0%
CTATGTTGTTCAGGAATCAC+CGG + chr3.2:38111782-38111801 None:intergenic 40.0%
GACAACGTGCAAAAGTTCAT+TGG - chr3.2:38113353-38113372 MS.gene000506:intron 40.0%
GAGCAGTAAGTGTCTATTGA+AGG - chr3.2:38114677-38114696 MS.gene000506:CDS 40.0%
GATATGTACTAATGCTCCAG+TGG - chr3.2:38114344-38114363 MS.gene000506:CDS 40.0%
GATTGTGCATTACTCAGTGT+TGG - chr3.2:38114173-38114192 MS.gene000506:CDS 40.0%
GCGCTTCAAAGGCTATAATA+CGG + chr3.2:38113444-38113463 None:intergenic 40.0%
GCGTCAAAAAAGTCTGAATG+CGG + chr3.2:38115017-38115036 None:intergenic 40.0%
GCTAAAAATGATGTAACGGC+AGG - chr3.2:38112289-38112308 MS.gene000506:intron 40.0%
GGAGTCGACATAATTGTAAC+AGG - chr3.2:38113194-38113213 MS.gene000506:intron 40.0%
GGTATTATGGATTCCCAGAA+GGG - chr3.2:38112649-38112668 MS.gene000506:intron 40.0%
GGTGTACGATCGAATTGATT+GGG - chr3.2:38114077-38114096 MS.gene000506:CDS 40.0%
GGTTAAGTGCTACGTCATTA+GGG + chr3.2:38111343-38111362 None:intergenic 40.0%
GTATCCATTAATTCAGCCAC+AGG + chr3.2:38112193-38112212 None:intergenic 40.0%
GTATTATGGATTCCCAGAAG+GGG - chr3.2:38112650-38112669 MS.gene000506:intron 40.0%
GTGCAGGTGATTTAACCAAT+TGG - chr3.2:38113173-38113192 MS.gene000506:intron 40.0%
TAATAAACGCATTCAGGTGG+GGG - chr3.2:38114802-38114821 MS.gene000506:CDS 40.0%
TAATACCCGGTAAATTGCCA+AGG + chr3.2:38112636-38112655 None:intergenic 40.0%
TATGCATTCGGATAAGTGTC+CGG - chr3.2:38113657-38113676 MS.gene000506:intron 40.0%
TATTATGGATTCCCAGAAGG+GGG - chr3.2:38112651-38112670 MS.gene000506:intron 40.0%
TCTTTAAGTACGAAAGGCTC+TGG - chr3.2:38111582-38111601 MS.gene000506:intron 40.0%
TGATGTCATACCTAGACTAG+AGG - chr3.2:38113147-38113166 MS.gene000506:intron 40.0%
TGGCAATTTACCGGGTATTA+TGG - chr3.2:38112636-38112655 MS.gene000506:intron 40.0%
TGGGCTAATTGGATGCATAA+GGG - chr3.2:38111950-38111969 MS.gene000506:intron 40.0%
TGGTAGTACTACTACTGAGA+TGG - chr3.2:38111844-38111863 MS.gene000506:intron 40.0%
TGGTTAAGTGCTACGTCATT+AGG + chr3.2:38111344-38111363 None:intergenic 40.0%
TTAGTGGAGTTTAAGGATGG+GGG + chr3.2:38113784-38113803 None:intergenic 40.0%
TTATCCAGAATTGATCTGCC+AGG + chr3.2:38113967-38113986 None:intergenic 40.0%
TTGTCGGTCCATAAGAGTTA+CGG - chr3.2:38114873-38114892 MS.gene000506:CDS 40.0%
! AATGGCTCACTTTGGAAGAA+GGG - chr3.2:38111033-38111052 MS.gene000506:CDS 40.0%
! AGTACCTAGTGCGGTATTTT+AGG - chr3.2:38112400-38112419 MS.gene000506:intron 40.0%
! AGTTTTTCGTGGTGTATTGG+TGG - chr3.2:38112723-38112742 MS.gene000506:intron 40.0%
! CAAGAGATGTGAGTTTTTCG+TGG - chr3.2:38112712-38112731 MS.gene000506:intron 40.0%
! CAAGCTATTGGGGCATATTT+TGG - chr3.2:38111425-38111444 MS.gene000506:CDS 40.0%
! CGCACTAGGTACTTCAATTT+TGG + chr3.2:38112393-38112412 None:intergenic 40.0%
! CTAATGATGGTGTAAGAGGA+TGG - chr3.2:38111675-38111694 MS.gene000506:intron 40.0%
! GAATTAATGGATACTGGGGA+AGG - chr3.2:38112199-38112218 MS.gene000506:intron 40.0%
! GACTCTAATGATGGTGTAAG+AGG - chr3.2:38111671-38111690 MS.gene000506:intron 40.0%
! GGCTGAATTAATGGATACTG+GGG - chr3.2:38112195-38112214 MS.gene000506:intron 40.0%
! GTGAGTTTTTCGTGGTGTAT+TGG - chr3.2:38112720-38112739 MS.gene000506:intron 40.0%
! GTGGCTGAATTAATGGATAC+TGG - chr3.2:38112193-38112212 MS.gene000506:intron 40.0%
! GTTTTGCTTATCTGAGCGAA+AGG - chr3.2:38111147-38111166 MS.gene000506:CDS 40.0%
! TAGGTACTGCTGATGTTAGT+GGG - chr3.2:38112227-38112246 MS.gene000506:intron 40.0%
! TCTTGCCAACAGGTTGAAAA+AGG - chr3.2:38113900-38113919 MS.gene000506:CDS 40.0%
! TCTTTTAACGCTGCTATGCT+TGG - chr3.2:38114921-38114940 MS.gene000506:CDS 40.0%
! TTAGGTACTGCTGATGTTAG+TGG - chr3.2:38112226-38112245 MS.gene000506:intron 40.0%
! TTCTGGGAATCCATAATACC+CGG + chr3.2:38112649-38112668 None:intergenic 40.0%
!! AGCCATGTTTGCTATGCATT+CGG - chr3.2:38113645-38113664 MS.gene000506:intron 40.0%
!! GAAAGAGGTATTCCAGTAGA+GGG + chr3.2:38112547-38112566 None:intergenic 40.0%
!! TGAAAGAGGTATTCCAGTAG+AGG + chr3.2:38112548-38112567 None:intergenic 40.0%
!! TGCAGTTCGTTCTGAAATCA+AGG - chr3.2:38111889-38111908 MS.gene000506:intron 40.0%
!! TTATCGGTGTCAGTAACAAC+TGG + chr3.2:38113583-38113602 None:intergenic 40.0%
!! TTTCTAAGGTTCTTGCCAAC+AGG - chr3.2:38113890-38113909 MS.gene000506:CDS 40.0%
!!! TCAATTTTGGAACTACACGC+AGG + chr3.2:38112380-38112399 None:intergenic 40.0%
AACGGACAATGAAGGATTGG+AGG - chr3.2:38113833-38113852 MS.gene000506:CDS 45.0%
ACATCAGCAACGGACAATGA+AGG - chr3.2:38113825-38113844 MS.gene000506:intron 45.0%
ACTGAGATGGTTATCCTTGG+TGG - chr3.2:38111857-38111876 MS.gene000506:intron 45.0%
AGCAACGGACAATGAAGGAT+TGG - chr3.2:38113830-38113849 MS.gene000506:intron 45.0%
AGTAACATCTGGCGCTTCAA+AGG + chr3.2:38113455-38113474 None:intergenic 45.0%
AGTCAATCTGCCTTTGTACC+TGG - chr3.2:38113946-38113965 MS.gene000506:CDS 45.0%
ATGATCATGCTATGGGTCCT+TGG - chr3.2:38112616-38112635 MS.gene000506:intron 45.0%
ATGCATTCGGATAAGTGTCC+GGG - chr3.2:38113658-38113677 MS.gene000506:intron 45.0%
ATGGGTCCTTGGCAATTTAC+CGG - chr3.2:38112627-38112646 MS.gene000506:intron 45.0%
ATTCTCGACCACTGTCTGAT+TGG - chr3.2:38111098-38111117 MS.gene000506:CDS 45.0%
CAATTCTGCCTGCTGCTAAA+AGG - chr3.2:38111204-38111223 MS.gene000506:CDS 45.0%
CATAAGAGTTACGGTGGCAT+GGG - chr3.2:38114882-38114901 MS.gene000506:CDS 45.0%
CATACTAGACTCATTCCCCT+CGG + chr3.2:38112333-38112352 None:intergenic 45.0%
CTGGGCTAATTGGATGCATA+AGG - chr3.2:38111949-38111968 MS.gene000506:intron 45.0%
GAGATGTGGTTGAAACTAGC+TGG - chr3.2:38113107-38113126 MS.gene000506:intron 45.0%
GAGGGCTCGTAATAGTGAAT+GGG - chr3.2:38111550-38111569 MS.gene000506:intron 45.0%
GCACAATCTCGACACACATA+AGG + chr3.2:38114161-38114180 None:intergenic 45.0%
GCATGACAGATAGAGCATAC+TGG - chr3.2:38112784-38112803 MS.gene000506:CDS 45.0%
GCCAGATGTTACTCGAGTTA+CGG - chr3.2:38113462-38113481 MS.gene000506:intron 45.0%
GCCGAGAATTTGTGTAAGCA+TGG + chr3.2:38114541-38114560 None:intergenic 45.0%
GCTGGAAAACATCTGGTGTT+GGG - chr3.2:38112031-38112050 MS.gene000506:intron 45.0%
GCTGTCATGGGAAAAGTTGT+CGG - chr3.2:38114857-38114876 MS.gene000506:CDS 45.0%
GCTTCTCCAATTGCTGAAGA+GGG - chr3.2:38112163-38112182 MS.gene000506:intron 45.0%
GGGTATTATGGATTCCCAGA+AGG - chr3.2:38112648-38112667 MS.gene000506:intron 45.0%
GTAAGTGTCTATTGAAGGCG+GGG - chr3.2:38114682-38114701 MS.gene000506:CDS 45.0%
GTACCTAGTTTCCGAGAAGA+TGG + chr3.2:38111716-38111735 None:intergenic 45.0%
GTACTACCAGACACTGCATT+TGG + chr3.2:38111833-38111852 None:intergenic 45.0%
GTCAATCCAAATGCAGTGTC+TGG - chr3.2:38111824-38111843 MS.gene000506:intron 45.0%
TATGTTCCCTACGACAGAGT+TGG - chr3.2:38112961-38112980 MS.gene000506:CDS 45.0%
TCCGTAACTCGAGTAACATC+TGG + chr3.2:38113466-38113485 None:intergenic 45.0%
TCTTTGGCAACCAGTGAAAG+GGG - chr3.2:38111178-38111197 MS.gene000506:CDS 45.0%
TGACAGAATCACTCCTGGTA+TGG - chr3.2:38111316-38111335 MS.gene000506:intron 45.0%
TGACGTAGCACTTAACCATC+TGG - chr3.2:38111346-38111365 MS.gene000506:intron 45.0%
TGAGGGCTCGTAATAGTGAA+TGG - chr3.2:38111549-38111568 MS.gene000506:intron 45.0%
TGATCCTGTGAAGAGTGAAC+CGG - chr3.2:38111760-38111779 MS.gene000506:intron 45.0%
TGCTGGAAAACATCTGGTGT+TGG - chr3.2:38112030-38112049 MS.gene000506:intron 45.0%
TGTACCTGGCAGATCAATTC+TGG - chr3.2:38113960-38113979 MS.gene000506:CDS 45.0%
TGTGCCTGTGGCTGAATTAA+TGG - chr3.2:38112186-38112205 MS.gene000506:intron 45.0%
TTCAGATTTGGGGAGACTGA+TGG + chr3.2:38114481-38114500 None:intergenic 45.0%
TTGACAGCAGCTCGTGTAAA+CGG + chr3.2:38111809-38111828 None:intergenic 45.0%
TTGACTGATTGTCGTAACCG+AGG - chr3.2:38113250-38113269 MS.gene000506:intron 45.0%
! AACGGAGCACTATGTTGTTC+AGG + chr3.2:38111791-38111810 None:intergenic 45.0%
! AGGTACTGCTGATGTTAGTG+GGG - chr3.2:38112228-38112247 MS.gene000506:intron 45.0%
! ATGGCTCACTTTGGAAGAAG+GGG - chr3.2:38111034-38111053 MS.gene000506:CDS 45.0%
! CGAGTCTGAAACCATCTTCT+CGG - chr3.2:38111702-38111721 MS.gene000506:intron 45.0%
! CTAGTGCCGAAAGTTATACG+TGG - chr3.2:38113031-38113050 MS.gene000506:CDS 45.0%
! GAATGGCTCACTTTGGAAGA+AGG - chr3.2:38111032-38111051 MS.gene000506:CDS 45.0%
! GCACTAGTCTGAGCAGAATA+GGG + chr3.2:38113018-38113037 None:intergenic 45.0%
! TAGGTACTGCTGCAACCAAT+AGG - chr3.2:38111729-38111748 MS.gene000506:intron 45.0%
! TGAGACAAGTATGTGCCACT+TGG - chr3.2:38113486-38113505 MS.gene000506:intron 45.0%
! TGTTTTGCTTGTGGTGTGCT+GGG - chr3.2:38111611-38111630 MS.gene000506:intron 45.0%
!! ATATCTTCCAGGAGTGTTGC+AGG - chr3.2:38113737-38113756 MS.gene000506:intron 45.0%
!! GTTAATAGTACTGGTCGGAG+TGG - chr3.2:38112513-38112532 MS.gene000506:intron 45.0%
!! TGGATGCATAAGGGTATTGC+TGG - chr3.2:38111959-38111978 MS.gene000506:intron 45.0%
!! TTGTTTTGCTTGTGGTGTGC+TGG - chr3.2:38111610-38111629 MS.gene000506:intron 45.0%
!!! GCTTGGTTTTGCAACCGAAT+GGG - chr3.2:38114125-38114144 MS.gene000506:CDS 45.0%
ACCTTCCAGTCCTGTTTGAG+CGG + chr3.2:38111530-38111549 None:intergenic 50.0%
ACGTAACGACGCTAGCTGTT+CGG + chr3.2:38113290-38113309 None:intergenic 50.0%
ACGTCATTAGGGACCATACC+AGG + chr3.2:38111332-38111351 None:intergenic 50.0%
AGCCCTCGCCATGGAATAAT+CGG + chr3.2:38114219-38114238 None:intergenic 50.0%
AGTGAGGATCCGTTGTTTGC+TGG - chr3.2:38111995-38112014 MS.gene000506:intron 50.0%
ATCCAATTAGCCCAGCCTTC+AGG + chr3.2:38111944-38111963 None:intergenic 50.0%
ATCCTGAAGGCTGGGCTAAT+TGG - chr3.2:38111939-38111958 MS.gene000506:intron 50.0%
ATCGTGCCTTGGCAACTGAT+GGG - chr3.2:38112930-38112949 MS.gene000506:CDS 50.0%
ATGACAGCCAATGAAGTCCC+CGG + chr3.2:38114845-38114864 None:intergenic 50.0%
ATGCAGCCTCGTACACTGAT+AGG + chr3.2:38114449-38114468 None:intergenic 50.0%
ATTAGGCAAGCAGAGAGGAG+TGG - chr3.2:38114303-38114322 MS.gene000506:CDS 50.0%
CAAAATATTCCCGGGCCAAG+TGG + chr3.2:38113504-38113523 None:intergenic 50.0%
CAAACAGGACTGGAAGGTGA+GGG - chr3.2:38111532-38111551 MS.gene000506:intron 50.0%
CAACTAACCGGGGACTTCAT+TGG - chr3.2:38114835-38114854 MS.gene000506:CDS 50.0%
CATAGAGGAGCAACTAACCG+GGG - chr3.2:38114825-38114844 MS.gene000506:CDS 50.0%
CCAATAGCTTGAGCAACACG+GGG + chr3.2:38111416-38111435 None:intergenic 50.0%
CCATAAGAGTTACGGTGGCA+TGG - chr3.2:38114881-38114900 MS.gene000506:CDS 50.0%
CCATGCCACCGTAACTCTTA+TGG + chr3.2:38114884-38114903 None:intergenic 50.0%
CCCAATAGCTTGAGCAACAC+GGG + chr3.2:38111417-38111436 None:intergenic 50.0%
CCCCAATAGCTTGAGCAACA+CGG + chr3.2:38111418-38111437 None:intergenic 50.0%
CGCTTATTAGGCAAGCAGAG+AGG - chr3.2:38114298-38114317 MS.gene000506:CDS 50.0%
CGCTTCTCCAATTGCTGAAG+AGG - chr3.2:38112162-38112181 MS.gene000506:intron 50.0%
CGGGGTTGAATGAACCCAAA+TGG + chr3.2:38111398-38111417 None:intergenic 50.0%
CTCGGGACAGGCAAATACTT+GGG - chr3.2:38114573-38114592 MS.gene000506:CDS 50.0%
CTGGATAATGCGATGGTTGC+TGG - chr3.2:38113979-38113998 MS.gene000506:CDS 50.0%
CTGGCCTAAAATACCGCACT+AGG + chr3.2:38112407-38112426 None:intergenic 50.0%
CTTATGGAGGCTGATCCTGA+AGG - chr3.2:38111926-38111945 MS.gene000506:intron 50.0%
GAATATGCTGCTGCTGGTCA+TGG - chr3.2:38112088-38112107 MS.gene000506:intron 50.0%
GAGTGATTCTGTCAACCACC+AGG + chr3.2:38111310-38111329 None:intergenic 50.0%
GATACTGGGGAAGGGAACTT+AGG - chr3.2:38112208-38112227 MS.gene000506:intron 50.0%
GATTGACAGATGTGTGCCGA+TGG - chr3.2:38112844-38112863 MS.gene000506:CDS 50.0%
GCATAGAGGAGCAACTAACC+GGG - chr3.2:38114824-38114843 MS.gene000506:CDS 50.0%
GCTCTTGAATATGCTGCTGC+TGG - chr3.2:38112082-38112101 MS.gene000506:intron 50.0%
GCTTATCTGAGCGAAAGGCT+GGG - chr3.2:38111152-38111171 MS.gene000506:CDS 50.0%
GGAGAGATTAGATCGTGCCT+TGG - chr3.2:38112919-38112938 MS.gene000506:CDS 50.0%
GGATCTTAAGACCCGGCTTA+TGG - chr3.2:38111910-38111929 MS.gene000506:intron 50.0%
GGCATAGAGGAGCAACTAAC+CGG - chr3.2:38114823-38114842 MS.gene000506:CDS 50.0%
GGGAAGACGACGTAATGCAT+GGG - chr3.2:38112671-38112690 MS.gene000506:intron 50.0%
GGGGAATGAGTCTAGTATGC+TGG - chr3.2:38112334-38112353 MS.gene000506:intron 50.0%
GTACTGCTGCAACCAATAGG+TGG - chr3.2:38111732-38111751 MS.gene000506:intron 50.0%
GTGAGGATCCGTTGTTTGCT+GGG - chr3.2:38111996-38112015 MS.gene000506:intron 50.0%
GTGGTTGACAGAATCACTCC+TGG - chr3.2:38111311-38111330 MS.gene000506:intron 50.0%
GTTTCTTCATGCCTCCGCAA+CGG - chr3.2:38113402-38113421 MS.gene000506:intron 50.0%
TCAAACAGGACTGGAAGGTG+AGG - chr3.2:38111531-38111550 MS.gene000506:intron 50.0%
TCGACCACTGTCTGATTGGA+CGG - chr3.2:38111102-38111121 MS.gene000506:CDS 50.0%
TCGGGACAGGCAAATACTTG+GGG - chr3.2:38114574-38114593 MS.gene000506:CDS 50.0%
TCGGTCCATAAGAGTTACGG+TGG - chr3.2:38114876-38114895 MS.gene000506:CDS 50.0%
TCTGGCAGCGCATTCATTCT+TGG - chr3.2:38114655-38114674 MS.gene000506:CDS 50.0%
TCTTAAGACCCGGCTTATGG+AGG - chr3.2:38111913-38111932 MS.gene000506:intron 50.0%
TGCTTATCTGAGCGAAAGGC+TGG - chr3.2:38111151-38111170 MS.gene000506:CDS 50.0%
TGGGTCCTTGGCAATTTACC+GGG - chr3.2:38112628-38112647 MS.gene000506:intron 50.0%
TGGTAGGGAACCCATTCACA+TGG - chr3.2:38112864-38112883 MS.gene000506:CDS 50.0%
TGTCACACAACCGCTCAAAC+AGG - chr3.2:38111517-38111536 MS.gene000506:intron 50.0%
TTAACCACCTGCAACACTCC+TGG + chr3.2:38113747-38113766 None:intergenic 50.0%
TTACGGTGGCATGGGATTCA+AGG - chr3.2:38114890-38114909 MS.gene000506:CDS 50.0%
TTAGGCAAGCAGAGAGGAGT+GGG - chr3.2:38114304-38114323 MS.gene000506:CDS 50.0%
TTCCGAAGGGACATCAGCAA+CGG - chr3.2:38113815-38113834 MS.gene000506:intron 50.0%
! ACAGATGTGTGCCGATGGTA+GGG - chr3.2:38112849-38112868 MS.gene000506:CDS 50.0%
! CCCGTGTTGCTCAAGCTATT+GGG - chr3.2:38111414-38111433 MS.gene000506:CDS 50.0%
! CCGTGTTGCTCAAGCTATTG+GGG - chr3.2:38111415-38111434 MS.gene000506:CDS 50.0%
! CTTGGCCCGGGAATATTTTG+AGG - chr3.2:38113504-38113523 MS.gene000506:intron 50.0%
! GGCACTAGTCTGAGCAGAAT+AGG + chr3.2:38113019-38113038 None:intergenic 50.0%
! GGGACTTCATTGGCTGTCAT+GGG - chr3.2:38114845-38114864 MS.gene000506:CDS 50.0%
! GTGAATGGGTTCCCTACCAT+CGG + chr3.2:38112863-38112882 None:intergenic 50.0%
! GTGAGCATTGCTGCATCAAC+CGG + chr3.2:38114519-38114538 None:intergenic 50.0%
! GTTTTGCAACCGAATGGGTG+CGG - chr3.2:38114130-38114149 MS.gene000506:CDS 50.0%
! TGAGGATCCGTTGTTTGCTG+GGG - chr3.2:38111997-38112016 MS.gene000506:intron 50.0%
! TGGCTCACTTTGGAAGAAGG+GGG - chr3.2:38111035-38111054 MS.gene000506:CDS 50.0%
!! AATAGTACTGGTCGGAGTGG+TGG - chr3.2:38112516-38112535 MS.gene000506:intron 50.0%
!! ATCACCGGTTCACTCTTCAC+AGG + chr3.2:38111767-38111786 None:intergenic 50.0%
!! GCATAAGGGTATTGCTGGAC+AGG - chr3.2:38111964-38111983 MS.gene000506:intron 50.0%
!! GTGTAGCGCTGATATCTTCC+AGG - chr3.2:38113726-38113745 MS.gene000506:intron 50.0%
!!! AAGAAGCGCCTTTTAGCAGC+AGG + chr3.2:38111215-38111234 None:intergenic 50.0%
!!! CACTTTTTTACGCGCCGTTG+CGG + chr3.2:38113419-38113438 None:intergenic 50.0%
!!! GGCTTGGTTTTGCAACCGAA+TGG - chr3.2:38114124-38114143 MS.gene000506:CDS 50.0%
!!! TTTTAGGGCAGCTGAAGCTG+AGG - chr3.2:38114404-38114423 MS.gene000506:CDS 50.0%
AACTCGGGGCTGAAACCATC+AGG + chr3.2:38113685-38113704 None:intergenic 55.0%
AAGGATCCACCGCACCCATT+CGG + chr3.2:38114142-38114161 None:intergenic 55.0%
ACCGCTCAAACAGGACTGGA+AGG - chr3.2:38111526-38111545 MS.gene000506:intron 55.0%
ACGGGTTCTCACTGACAAGG+AGG - chr3.2:38111121-38111140 MS.gene000506:CDS 55.0%
AGGATCACGCAGCCACCTAT+TGG + chr3.2:38111747-38111766 None:intergenic 55.0%
AGGATCAGCCTCCATAAGCC+GGG + chr3.2:38111924-38111943 None:intergenic 55.0%
ATGCCACCCATCAGTTGCCA+AGG + chr3.2:38112939-38112958 None:intergenic 55.0%
CACAACCGCTCAAACAGGAC+TGG - chr3.2:38111522-38111541 MS.gene000506:intron 55.0%
CACGCAGGTTACCTAAGCCT+CGG + chr3.2:38112365-38112384 None:intergenic 55.0%
CAGAGTCTGTCACCGCTTGT+CGG + chr3.2:38112824-38112843 None:intergenic 55.0%
CAGCAGCATCAGTGTTCTCC+AGG + chr3.2:38111073-38111092 None:intergenic 55.0%
CAGGATCAGCCTCCATAAGC+CGG + chr3.2:38111925-38111944 None:intergenic 55.0%
CCAAGTATTTGCCTGTCCCG+AGG + chr3.2:38114575-38114594 None:intergenic 55.0%
CCATCTGGACATATGGGTGC+AGG - chr3.2:38111361-38111380 MS.gene000506:intron 55.0%
CCCATCCTTCATCACGTTGG+CGG + chr3.2:38111264-38111283 None:intergenic 55.0%
CCGCCAACGTGATGAAGGAT+GGG - chr3.2:38111261-38111280 MS.gene000506:intron 55.0%
CCTCGGGACAGGCAAATACT+TGG - chr3.2:38114572-38114591 MS.gene000506:CDS 55.0%
CCTGCACATGCCTCTAGTCT+AGG + chr3.2:38113160-38113179 None:intergenic 55.0%
CCTGCACCCATATGTCCAGA+TGG + chr3.2:38111364-38111383 None:intergenic 55.0%
CGACCACTGTCTGATTGGAC+GGG - chr3.2:38111103-38111122 MS.gene000506:CDS 55.0%
CGTAACGACGCTAGCTGTTC+GGG + chr3.2:38113289-38113308 None:intergenic 55.0%
CTAGTATGCTGGAACTGCCG+AGG - chr3.2:38112345-38112364 MS.gene000506:intron 55.0%
CTGCAGTGATACGTCCACCA+AGG + chr3.2:38111874-38111893 None:intergenic 55.0%
GAACCCGTCCAATCAGACAG+TGG + chr3.2:38111109-38111128 None:intergenic 55.0%
GATAAGTGTCCGGGACCTGA+TGG - chr3.2:38113667-38113686 MS.gene000506:intron 55.0%
GATCGTGCCTTGGCAACTGA+TGG - chr3.2:38112929-38112948 MS.gene000506:CDS 55.0%
GATGTAACGGCAGGTCCTGT+TGG - chr3.2:38112298-38112317 MS.gene000506:intron 55.0%
GATTCCGCCCCAGCAAACAA+CGG + chr3.2:38112007-38112026 None:intergenic 55.0%
GCGAAAGGCTGGGCAATCTT+TGG - chr3.2:38111162-38111181 MS.gene000506:CDS 55.0%
GGCACACCCTCTTCAGCAAT+TGG + chr3.2:38112172-38112191 None:intergenic 55.0%
GGCCGATTATTCCATGGCGA+GGG - chr3.2:38114214-38114233 MS.gene000506:CDS 55.0%
GGGCACACCAAGAGCTATAG+AGG - chr3.2:38112898-38112917 MS.gene000506:CDS 55.0%
GGGGAAGACGACGTAATGCA+TGG - chr3.2:38112670-38112689 MS.gene000506:intron 55.0%
GTAACGACGCTAGCTGTTCG+GGG + chr3.2:38113288-38113307 None:intergenic 55.0%
GTCCGTTGCTGATGTCCCTT+CGG + chr3.2:38113820-38113839 None:intergenic 55.0%
GTGGTGGTTTAGCCCTCTAC+TGG - chr3.2:38112532-38112551 MS.gene000506:intron 55.0%
GTGTTGGGAATGAGTGCGCA+GGG - chr3.2:38112046-38112065 MS.gene000506:intron 55.0%
TACGTCGTCTTCCCCCTTCT+GGG + chr3.2:38112665-38112684 None:intergenic 55.0%
TAGGCAAGCAGAGAGGAGTG+GGG - chr3.2:38114305-38114324 MS.gene000506:CDS 55.0%
TCAGTGTACGAGGCTGCATC+TGG - chr3.2:38114450-38114469 MS.gene000506:CDS 55.0%
TGCGATGGTTGCTGGTGAAG+TGG - chr3.2:38113987-38114006 MS.gene000506:CDS 55.0%
TGGACAGGCTACACAGAGTG+AGG - chr3.2:38111979-38111998 MS.gene000506:intron 55.0%
TGGTCGGGCCGATTATTCCA+TGG - chr3.2:38114208-38114227 MS.gene000506:CDS 55.0%
TTACGTCGTCTTCCCCCTTC+TGG + chr3.2:38112666-38112685 None:intergenic 55.0%
TTGGGGCTACCCTCCATGAT+TGG - chr3.2:38114591-38114610 MS.gene000506:CDS 55.0%
! CCCCGTGTTGCTCAAGCTAT+TGG - chr3.2:38111413-38111432 MS.gene000506:CDS 55.0%
! CCTAGACTAGAGGCATGTGC+AGG - chr3.2:38113157-38113176 MS.gene000506:intron 55.0%
! GACAGATGTGTGCCGATGGT+AGG - chr3.2:38112848-38112867 MS.gene000506:CDS 55.0%
! GGGGACTTCATTGGCTGTCA+TGG - chr3.2:38114844-38114863 MS.gene000506:CDS 55.0%
! TGCTGCTGGTCATGGCTTTG+AGG - chr3.2:38112096-38112115 MS.gene000506:intron 55.0%
! TGGACGGGTTCTCACTGACA+AGG - chr3.2:38111118-38111137 MS.gene000506:CDS 55.0%
! TGTGACAGAGGCGACTAGCT+TGG - chr3.2:38114962-38114981 MS.gene000506:CDS 55.0%
!! AAGTATGTGCCACTTGGCCC+GGG - chr3.2:38113492-38113511 MS.gene000506:intron 55.0%
!! ATGGGGATAACGGATTCCCC+TGG + chr3.2:38114245-38114264 None:intergenic 55.0%
!! CAAGTATGTGCCACTTGGCC+CGG - chr3.2:38113491-38113510 MS.gene000506:intron 55.0%
!! TCTTCCAGGAGTGTTGCAGG+TGG - chr3.2:38113740-38113759 MS.gene000506:intron 55.0%
!!! TTTTTTACGCGCCGTTGCGG+AGG + chr3.2:38113416-38113435 None:intergenic 55.0%
AACGGCAGGTCCTGTTGGTC+AGG - chr3.2:38112303-38112322 MS.gene000506:intron 60.0%
ACGTGATGAAGGATGGGCCC+TGG - chr3.2:38111267-38111286 MS.gene000506:intron 60.0%
CGACAAGCGGTGACAGACTC+TGG - chr3.2:38112822-38112841 MS.gene000506:CDS 60.0%
CGATGCCGCCAACGTGATGA+AGG - chr3.2:38111256-38111275 MS.gene000506:intron 60.0%
CGGGGTCACAAGCTTGACCT+CGG + chr3.2:38113270-38113289 None:intergenic 60.0%
CTAGACTCATTCCCCTCGGC+AGG + chr3.2:38112329-38112348 None:intergenic 60.0%
GCCGCCAACGTGATGAAGGA+TGG - chr3.2:38111260-38111279 MS.gene000506:intron 60.0%
GGAGGCTGATCCTGAAGGCT+GGG - chr3.2:38111931-38111950 MS.gene000506:intron 60.0%
GGGCCCATCCTTCATCACGT+TGG + chr3.2:38111267-38111286 None:intergenic 60.0%
GGGCCGATTATTCCATGGCG+AGG - chr3.2:38114213-38114232 MS.gene000506:CDS 60.0%
GGGCTGAAACCATCAGGTCC+CGG + chr3.2:38113679-38113698 None:intergenic 60.0%
GTGCCTTGGCAACTGATGGG+TGG - chr3.2:38112933-38112952 MS.gene000506:CDS 60.0%
TCTATTGAAGGCGGGGCGTG+AGG - chr3.2:38114689-38114708 MS.gene000506:CDS 60.0%
TGCTGGAACTGCCGAGGCTT+AGG - chr3.2:38112351-38112370 MS.gene000506:intron 60.0%
TGGAGGCTGATCCTGAAGGC+TGG - chr3.2:38111930-38111949 MS.gene000506:intron 60.0%
TTGCAACCGAATGGGTGCGG+TGG - chr3.2:38114133-38114152 MS.gene000506:CDS 60.0%
! AGGGGGCATGACTCTCAACC+TGG - chr3.2:38111052-38111071 MS.gene000506:CDS 60.0%
! GCATTCAGGTGGGGGCATAG+AGG - chr3.2:38114810-38114829 MS.gene000506:CDS 60.0%
! GGATCCGTTGTTTGCTGGGG+CGG - chr3.2:38112000-38112019 MS.gene000506:intron 60.0%
! GGTGTTGGGAATGAGTGCGC+AGG - chr3.2:38112045-38112064 MS.gene000506:intron 60.0%
! TGCTGAAGAGGGTGTGCCTG+TGG - chr3.2:38112174-38112193 MS.gene000506:intron 60.0%
CTCGGCGTGCAAGCAGTCCT+CGG - chr3.2:38114555-38114574 MS.gene000506:CDS 65.0%
CTGTTGGTCAGGCCTGCCGA+GGG - chr3.2:38112314-38112333 MS.gene000506:intron 65.0%
GCTGGGGCGGAATCATCTGC+TGG - chr3.2:38112013-38112032 MS.gene000506:intron 65.0%
GTGCAAGCAGTCCTCGGGAC+AGG - chr3.2:38114561-38114580 MS.gene000506:CDS 65.0%
TCGGCGTGCAAGCAGTCCTC+GGG - chr3.2:38114556-38114575 MS.gene000506:CDS 65.0%
TGTTGGTCAGGCCTGCCGAG+GGG - chr3.2:38112315-38112334 MS.gene000506:intron 65.0%
! CGTTGGCGGCATCGAGACGA+TGG + chr3.2:38111250-38111269 None:intergenic 65.0%
CCTCGGCAGGCCTGACCAAC+AGG + chr3.2:38112316-38112335 None:intergenic 70.0%
CCTGTTGGTCAGGCCTGCCG+AGG - chr3.2:38112313-38112332 MS.gene000506:intron 70.0%
CATGGCGAGGGCTGCGCCAG+GGG - chr3.2:38114226-38114245 MS.gene000506:CDS 75.0%
CCATGGCGAGGGCTGCGCCA+GGG - chr3.2:38114225-38114244 MS.gene000506:CDS 75.0%
TCCATGGCGAGGGCTGCGCC+AGG - chr3.2:38114224-38114243 MS.gene000506:CDS 75.0%
! CCCTGGCGCAGCCCTCGCCA+TGG + chr3.2:38114228-38114247 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 38110993 38115067 38110993 ID=MS.gene000506
chr3.2 mRNA 38110993 38115067 38110993 ID=MS.gene000506.t1;Parent=MS.gene000506
chr3.2 exon 38113831 38115067 38113831 ID=MS.gene000506.t1.exon1;Parent=MS.gene000506.t1
chr3.2 CDS 38113831 38115067 38113831 ID=cds.MS.gene000506.t1;Parent=MS.gene000506.t1
chr3.2 exon 38112753 38113082 38112753 ID=MS.gene000506.t1.exon2;Parent=MS.gene000506.t1
chr3.2 CDS 38112753 38113082 38112753 ID=cds.MS.gene000506.t1;Parent=MS.gene000506.t1
chr3.2 exon 38111379 38111531 38111379 ID=MS.gene000506.t1.exon3;Parent=MS.gene000506.t1
chr3.2 CDS 38111379 38111531 38111379 ID=cds.MS.gene000506.t1;Parent=MS.gene000506.t1
chr3.2 exon 38110993 38111273 38110993 ID=MS.gene000506.t1.exon4;Parent=MS.gene000506.t1
chr3.2 CDS 38110993 38111273 38110993 ID=cds.MS.gene000506.t1;Parent=MS.gene000506.t1
Gene Sequence

>MS.gene000506

ATGTCTGCGGATCCCAAATCACCAATGAATCTCAACATTGAATGGCTCACTTTGGAAGAAGGGGGCATGACTCTCAACCTGGAGAACACTGATGCTGCTGTTACAATTCTCGACCACTGTCTGATTGGACGGGTTCTCACTGACAAGGAGGTGCGTTTTGCTTATCTGAGCGAAAGGCTGGGCAATCTTTGGCAACCAGTGAAAGGGGTTACAATTCTGCCTGCTGCTAAAAGGCGCTTCTTGTTCCAATTTAACCATCGTCTCGATGCCGCCAACGTGATGAAGGATGGGCCCTGGCTGTATGATAATTGTAACCTGGTGGTTGACAGAATCACTCCTGGTATGGTCCCTAATGACGTAGCACTTAACCATCTGGACATATGGGTGCAGGTTCACAATCTTCCATTTGGGTTCATTCAACCCCGTGTTGCTCAAGCTATTGGGGCATATTTTGGTGAGTTCAAAGAGTATGATGAGAAGAACACTCTGCACAGTTCCCTTATGATGCTGAAAGTTCACATTGATGTCACACAACCGCTCAAACAGGACTGGAAGGTGAGGGCTCGTAATAGTGAATGGGTCTCAGTTGTCTTTAAGTACGAAAGGCTCTGGACTTTTTGTTTTGCTTGTGGTGTGCTGGGTCATACCGACCGTACATGTGAAAAATTGTTTGAGAAGGACTCTAATGATGGTGTAAGAGGATGGGATGCGAGTCTGAAACCATCTTCTCGGAAACTAGGTACTGCTGCAACCAATAGGTGGCTGCGTGATCCTGTGAAGAGTGAACCGGTGATTCCTGAACAACATAGTGCTCCGTTTACACGAGCTGCTGTCAATCCAAATGCAGTGTCTGGTAGTACTACTACTGAGATGGTTATCCTTGGTGGACGTATCACTGCAGTTCGTTCTGAAATCAAGGATCTTAAGACCCGGCTTATGGAGGCTGATCCTGAAGGCTGGGCTAATTGGATGCATAAGGGTATTGCTGGACAGGCTACACAGAGTGAGGATCCGTTGTTTGCTGGGGCGGAATCATCTGCTGGAAAACATCTGGTGTTGGGAATGAGTGCGCAGGGCAGTGATCTGCAAGCTCTTGAATATGCTGCTGCTGGTCATGGCTTTGAGGACATGACAACAAAGTTGAAGAAAAGGAAACGCAACATGAAAGACGCTTCTCCAATTGCTGAAGAGGGTGTGCCTGTGGCTGAATTAATGGATACTGGGGAAGGGAACTTAGGTACTGCTGATGTTAGTGGGGTGACTCAAATTGTGTCTGTTTTTAATAATCTTGTATTTGCTAAAAATGATGTAACGGCAGGTCCTGTTGGTCAGGCCTGCCGAGGGGAATGAGTCTAGTATGCTGGAACTGCCGAGGCTTAGGTAACCTGCGTGTAGTTCCAAAATTGAAGTACCTAGTGCGGTATTTTAGGCCAGATGTTTTATTTCTTTCTGAGACTCTCGTCTCCTCTAATAAAAGTGAAGCTTTTCGTTATATGCTTGGTTATGTTTCTTGTCTTGCTGTTAATAGTACTGGTCGGAGTGGTGGTTTAGCCCTCTACTGGAATACCTCTTTCAATTGTACTGTAATTAATTACTCAAATAATCATATATCTGTTCGTATTGATGATCATGCTATGGGTCCTTGGCAATTTACCGGGTATTATGGATTCCCAGAAGGGGGAAGACGACGTAATGCATGGGATTATTTGCATGGGTTGGCAAGAGATGTGAGTTTTTCGTGGTGTATTGGTGGAGATTTTAACGACATCTTGTTTGAGCATGAGAAATCTGGCATGACAGATAGAGCATACTGGTTAATTAATTGGTTCCGACAAGCGGTGACAGACTCTGGATTGACAGATGTGTGCCGATGGTAGGGAACCCATTCACATGGTTTAAAAGTATGGGCACACCAAGAGCTATAGAGGAGAGATTAGATCGTGCCTTGGCAACTGATGGGTGGCATGTTATGTTCCCTACGACAGAGTTGGAAAATTTGGTTTCTCATTCGTCGGATCATTACCCTATTCTGCTCAGACTAGTGCCGAAAGTTATACGTGGTGTACGACGAACATTTAAGTATGAAAATGCTTGGCAAACAGAACCTAGATTTAGAGATGTGGTTGAAACTAGCTGGCAGCAAAGTGCATACTGTGATGTCATACCTAGACTAGAGGCATGTGCAGGTGATTTAACCAATTGGAGTCGACATAATTGTAACAGGTTGAAGGCTGAAATTGAAACATGTCGTAAGGCGTTGACTGATTGTCGTAACCGAGGTCAAGCTTGTGACCCCGAACAGCTAGCGTCGTTACGTAACCAGATGAATCAATTGTTAATACAGGATGATAATTATTGGAGACAACGTGCAAAAGTTCATTGGTATTAGGATGGTGATCTTAATACGAAGTTTCTTCATGCCTCCGCAACGGCGCGTAAAAAAGTGAACCGTATTATAGCCTTTGAAGCGCCAGATGTTACTCGAGTTACGGATGAGACAAGTATGTGCCACTTGGCCCGGGAATATTTTGAGGAGTTGTTCCAAGGACAGCTGAGCATATATTCACCCCTAATTAATGCTTTACATCCAGTTGTTACTGACACCGATAATTTGGAACTCACGACACCTTTTCAAATAGATGAATTTAAAGAAGCCATGTTTGCTATGCATTCGGATAAGTGTCCGGGACCTGATGGTTTCAGCCCCGAGTTCTACAATCATTTCTGGAACACGTGTAGCGCTGATATCTTCCAGGAGTGTTGCAGGTGGTTAAATGAAAATCAGTTTCCCCCATCCTTAAACTCCACTAATATTTCACTCATTCCGAAGGGACATCAGCAACGGACAATGAAGGATTGGAGGCCAATTGCCTTGTGAAACGTGTTGTATAAATTAGTTTCTAAGGTTCTTGCCAACAGGTTGAAAAAGGTTCTTAATAAATGCATTTCTGAGAGTCAATCTGCCTTTGTACCTGGCAGATCAATTCTGGATAATGCGATGGTTGCTGGTGAAGTGGTTCATTATATGAAAACAAATAGGAGGCGGCTCAATACAAATGTTGCTCTGAAGCTTGATATAAGCAAGGTGTACGATCGAATTGATTGGGTATATTTGAAAGAAGTAATGTTGAGGCTTGGTTTTGCAACCGAATGGGTGCGGTGGATCCTTATGTGTGTCGAGATTGTGCATTACTCAGTGTTGGTTAATAATAACTTGGTCGGGCCGATTATTCCATGGCGAGGGCTGCGCCAGGGGAATCCGTTATCCCCATACCTTTTTATTCTCTGTGCAGAAGGATTGATTGCGCTTATTAGGCAAGCAGAGAGGAGTGGGGATTTGCATGTAGTGCAGATATGTACTAATGCTCCAGTGGTATCCCATCTTTTGTTCGCTAATGATTGTTTTCTATTTTTTAGGGCAGCTGAAGCTGAGGCACACACCATTAAACATATCCTATCAGTGTACGAGGCTGCATCTGGTCAAGCCATCAGTCTCCCCAAATCTGAAGTATATTACATCAGTCCGGTTGATGCAGCAATGCTCACCATGCTTACACAAATTCTCGGCGTGCAAGCAGTCCTCGGGACAGGCAAATACTTGGGGCTACCCTCCATGATTGGTAGAAACAAACAGGCAACTTTTGGATATATTAAGGATCGAATCTGGCAGCGCATTCATTCTTGGAGCAGTAAGTGTCTATTGAAGGCGGGGCGTGAGGTAATGATTAAATCGGTGCTGCAAGCTATTCCGACATATGTGATGAGCATTTCTCTTTTGCCAAAAACTTTCACAGTTGACATAGAAAGAATAATAAACGCATTCAGGTGGGGGCATAGAGGAGCAACTAACCGGGGACTTCATTGGCTGTCATGGGAAAAGTTGTCGGTCCATAAGAGTTACGGTGGCATGGGATTCAAGGATCTCACCTCTTTTAACGCTGCTATGCTTGGTAAACAAGCTTGGAAATTTGTGACAGAGGCGACTAGCTTGGTGTCGCGTCTTTTCAAGGCAAGGTATTATCCGCATTCAGACTTTTTTGACGCAAATATTGGTACCAACCCGAGCTATGTCTAG
Protein sequence

>MS.gene000506.t1

MSADPKSPMNLNIEWLTLEEGGMTLNLENTDAAVTILDHCLIGRVLTDKEVRFAYLSERLGNLWQPVKGVTILPAAKRRFLFQFNHRLDAANVMKDGPWLYDNCNLVVDRITPGMVPNDVALNHLDIWVQVHNLPFGFIQPRVAQAIGAYFGEFKEYDEKNTLHSSLMMLKVHIDVTQPLKQDWKVRARNSEWVSVVFKYERLWTFCFACGVLGHTDRTCEKLFEKDSNDGVRGWDASLKPSSRKLGTAATNRWLRDPVKSEPVIPEQHSAPFTRAAVNPNAVSGSTTTEMVILGGRITAVRSEIKDLKTRLMEADPEGWANWMHKGIAGQATQSEDPLFAGAESSAGKHLVLGMSAQGSDLQALEYAAAGHGFEDMTTKLKKRKRNMKDASPIAEEGVPVAELMDTGEGNLELENLVSHSSDHYPILLRLVPKVIRGVRRTFKYENAWQTEPRFRDVVETSWQQSAYCDVIPRLEACAGDLTNWSRHNCNRLKAEIETCRKALTDCRNRGQACDPEQLASLPMLTMLTQILGVQAVLGTGKYLGLPSMIGRNKQATFGYIKDRIWQRIHSWSIDIERIINAFRWGHRGATNRGLHWLSWEKLSVHKSYGGMGFKDLTSFNAAMLGKQAWKFVTEATSLVSRLFKARYYPHSDFFDANIGTNPSYV