Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97410.t1 | AES70414.1 | 58.4 | 274 | 48 | 3 | 1 | 259 | 1 | 223 | 4.20E-74 | 288.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97410.t1 | G7J017 | 58.4 | 274 | 48 | 3 | 1 | 259 | 1 | 223 | 3.0e-74 | 288.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97410.t1 | MTR_3g053920 | 56.934 | 274 | 52 | 3 | 1 | 259 | 1 | 223 | 5.21e-98 | 288 |
MS.gene97410.t1 | MTR_2g061500 | 88.073 | 109 | 13 | 0 | 1 | 109 | 1 | 109 | 2.52e-64 | 198 |
MS.gene97410.t1 | MTR_4g103530 | 39.423 | 208 | 72 | 8 | 55 | 259 | 1 | 157 | 7.53e-29 | 108 |
MS.gene97410.t1 | MTR_7g011710 | 68.519 | 54 | 17 | 0 | 55 | 108 | 1 | 54 | 5.20e-20 | 84.7 |
MS.gene97410.t1 | MTR_6g033215 | 25.434 | 173 | 97 | 2 | 29 | 169 | 122 | 294 | 7.62e-18 | 81.6 |
MS.gene97410.t1 | MTR_0010s0370 | 30.114 | 176 | 85 | 5 | 8 | 147 | 4 | 177 | 1.22e-16 | 76.3 |
MS.gene97410.t1 | MTR_0010s0350 | 30.114 | 176 | 85 | 5 | 8 | 147 | 4 | 177 | 1.22e-16 | 76.3 |
MS.gene97410.t1 | MTR_1g036720 | 35.294 | 102 | 64 | 1 | 7 | 106 | 3 | 104 | 3.00e-14 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 75 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGTTTCAGTTTCGGTTTCT+AGG | 0.215056 | 2.4:-33944484 | None:intergenic |
GATTCCAGCTCGAACAATTC+AGG | 0.274635 | 2.4:-33945057 | None:intergenic |
AGGAGCTATGAATGGTATTT+CGG | 0.286199 | 2.4:-33944873 | None:intergenic |
CCAAAAGTAGGTCAAGGTAT+AGG | 0.305336 | 2.4:+33944817 | MS.gene97410:intron |
TATCACAGGTGTGGAGTTAT+TGG | 0.310100 | 2.4:+33945015 | MS.gene97410:CDS |
GGAGCTATGAATGGTATTTC+GGG | 0.316007 | 2.4:-33944872 | None:intergenic |
AGACATACGCTCGCTGAAAT+AGG | 0.339311 | 2.4:-33944567 | None:intergenic |
CAAAAGTAGGTCAAGGTATA+GGG | 0.340570 | 2.4:+33944818 | MS.gene97410:intron |
CAAGGTATAGGGAGTTTCTT+AGG | 0.353008 | 2.4:+33944829 | MS.gene97410:CDS |
CAGATGATGAAGTTCGCAAC+TGG | 0.363828 | 2.4:+33945079 | MS.gene97410:CDS |
GACAGCCGCAGTTTCAGTTT+CGG | 0.383038 | 2.4:-33944492 | None:intergenic |
GCTCGCTGAAATAGGCGAAT+TGG | 0.384010 | 2.4:-33944559 | None:intergenic |
GAGTTTCTTAGGTACTCTTA+AGG | 0.400324 | 2.4:+33944840 | MS.gene97410:CDS |
ATAGCAATCAACCACAGATT+TGG | 0.402746 | 2.4:-33944624 | None:intergenic |
GTGATGGTGACTCTCTTGCC+TGG | 0.422782 | 2.4:-33944602 | None:intergenic |
GTATTGGTTGGCACGGCAGC+AGG | 0.430555 | 2.4:-33945174 | None:intergenic |
ATGTCTCGCGCTTGGAAGCC+AGG | 0.433996 | 2.4:+33944584 | MS.gene97410:CDS |
CCATCGAGGTTGAGGTTTGT+GGG | 0.438871 | 2.4:-33944428 | None:intergenic |
GTCTTAGAACACTGTTTGAT+AGG | 0.439263 | 2.4:+33944512 | MS.gene97410:CDS |
ACCATCGAGGTTGAGGTTTG+TGG | 0.440257 | 2.4:-33944429 | None:intergenic |
GGTTGGCACGGCAGCAGGGA+TGG | 0.454226 | 2.4:-33945169 | None:intergenic |
GTTGGCACGGCAGCAGGGAT+GGG | 0.460177 | 2.4:-33945168 | None:intergenic |
GGTGCTACTGTTGTCCCTGC+TGG | 0.464498 | 2.4:+33945201 | MS.gene97410:CDS |
GCTGCCCGCGTCCTTGATGA+AGG | 0.476946 | 2.4:+33944674 | MS.gene97410:CDS |
GCAGGTGTGTCTCGACCAGC+AGG | 0.482760 | 2.4:-33945216 | None:intergenic |
GCATAGCAGTGAGTTGTGTC+TGG | 0.485654 | 2.4:-33945288 | None:intergenic |
GAATAAGACCATCGAGGTTG+AGG | 0.489243 | 2.4:-33944436 | None:intergenic |
TACAAGCTTCAATGACCGTA+TGG | 0.500953 | 2.4:+33945257 | MS.gene97410:CDS |
GTACCAATCCTTTGAGACAT+TGG | 0.507668 | 2.4:-33945117 | None:intergenic |
AACAGTAGCACCGTGAGTAT+TGG | 0.508457 | 2.4:-33945190 | None:intergenic |
ATTCCAGCTCGAACAATTCA+GGG | 0.524061 | 2.4:-33945056 | None:intergenic |
AGCCACCTTGATACGCATAT+AGG | 0.524133 | 2.4:-33944893 | None:intergenic |
AAACCAATGTCTCAAAGGAT+TGG | 0.525033 | 2.4:+33945114 | MS.gene97410:CDS |
CAAAAGCACCATTGCTAGCA+CGG | 0.526371 | 2.4:-33944954 | None:intergenic |
CTGTTTGATAGGTCGTGTCT+TGG | 0.536227 | 2.4:+33944523 | MS.gene97410:CDS |
GCGAGCGTATGTCTCGCGCT+TGG | 0.538462 | 2.4:+33944576 | MS.gene97410:CDS |
ATGCCCTGAATTGTTCGAGC+TGG | 0.539430 | 2.4:+33945053 | MS.gene97410:CDS |
ATCTTGTAACCAACGATTGG+TGG | 0.539715 | 2.4:-33945145 | None:intergenic |
TGATAACTTTCATATCGTCA+TGG | 0.544625 | 2.4:+33944709 | MS.gene97410:CDS |
AGATGATGAAGTTCGCAACT+GGG | 0.548591 | 2.4:+33945080 | MS.gene97410:CDS |
GCGTCCTTGATGAAGGTCCA+TGG | 0.551347 | 2.4:+33944681 | MS.gene97410:CDS |
ATCTCAAACCAATGTCTCAA+AGG | 0.552010 | 2.4:+33945109 | MS.gene97410:CDS |
TAGCTCCTATATGCGTATCA+AGG | 0.556706 | 2.4:+33944888 | MS.gene97410:CDS |
GTCATGGATCGTATTTCTCC+CGG | 0.557360 | 2.4:+33944725 | MS.gene97410:CDS |
GTTTAGAGTGAGAACTTCAT+CGG | 0.559130 | 2.4:-33944462 | None:intergenic |
TGTCTGGAAGGCAGCCCATA+CGG | 0.562446 | 2.4:-33945272 | None:intergenic |
AGCAGTGAGTTGTGTCTGGA+AGG | 0.571480 | 2.4:-33945284 | None:intergenic |
GGGATCTTGTAACCAACGAT+TGG | 0.583369 | 2.4:-33945148 | None:intergenic |
CGCGGGCAGCATCCACCTTG+TGG | 0.587665 | 2.4:-33944661 | None:intergenic |
ATGGACCTTCATCAAGGACG+CGG | 0.588604 | 2.4:-33944679 | None:intergenic |
ACCGTGAGTATTGGTTGGCA+CGG | 0.592353 | 2.4:-33945181 | None:intergenic |
ACTGTGCATGTACCTTCAGC+AGG | 0.594217 | 2.4:-33945234 | None:intergenic |
AAAGCCATGGACCTTCATCA+AGG | 0.598408 | 2.4:-33944685 | None:intergenic |
GTACTGCTGCCACCAATCGT+TGG | 0.601781 | 2.4:+33945136 | MS.gene97410:CDS |
GCCGTGCCAACCAATACTCA+CGG | 0.603988 | 2.4:+33945180 | MS.gene97410:CDS |
TATTGGTTGGCACGGCAGCA+GGG | 0.608926 | 2.4:-33945173 | None:intergenic |
TGGACCTTCATCAAGGACGC+GGG | 0.609475 | 2.4:-33944678 | None:intergenic |
GGTCGAGACACACCTGCTGA+AGG | 0.612682 | 2.4:+33945222 | MS.gene97410:CDS |
CCCACAAACCTCAACCTCGA+TGG | 0.612979 | 2.4:+33944428 | MS.gene97410:CDS |
ACGCATATAGGAGCTATGAA+TGG | 0.617014 | 2.4:-33944881 | None:intergenic |
TGAAAGTTATCATAAAGCCA+TGG | 0.620426 | 2.4:-33944698 | None:intergenic |
ACAAGCTTCAATGACCGTAT+GGG | 0.621310 | 2.4:+33945258 | MS.gene97410:CDS |
TGGTGTGTCCGTGCTAGCAA+TGG | 0.625326 | 2.4:+33944946 | MS.gene97410:CDS |
GATGATGAAGTTCGCAACTG+GGG | 0.631562 | 2.4:+33945081 | MS.gene97410:CDS |
ATCAACCACAGATTTGGTGA+TGG | 0.633164 | 2.4:-33944618 | None:intergenic |
AGAAACCGAAACTGAAACTG+CGG | 0.633585 | 2.4:+33944487 | MS.gene97410:CDS |
GGGCAGCATCCACCTTGTGG+TGG | 0.648348 | 2.4:-33944658 | None:intergenic |
CTTTCAATTCCACCACAAGG+TGG | 0.656901 | 2.4:+33944649 | MS.gene97410:CDS |
GTAGCACCGTGAGTATTGGT+TGG | 0.658863 | 2.4:-33945186 | None:intergenic |
AGTCACCATCACCAAATCTG+TGG | 0.674033 | 2.4:+33944613 | MS.gene97410:CDS |
TCTCTTTCAATTCCACCACA+AGG | 0.680352 | 2.4:+33944646 | MS.gene97410:CDS |
CTCCTATATGCGTATCAAGG+TGG | 0.691467 | 2.4:+33944891 | MS.gene97410:CDS |
CAGGTGTGTCTCGACCAGCA+GGG | 0.708791 | 2.4:-33945215 | None:intergenic |
AGTTATTGGACATACAGACA+AGG | 0.744095 | 2.4:+33945029 | MS.gene97410:CDS |
CGGACAGAATAAGACCATCG+AGG | 0.785100 | 2.4:-33944442 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTTATTGTTGATTTTAAATA+TGG | + | chr2.4:33944976-33944995 | MS.gene97410:CDS | 15.0% |
!!! | GATTTTAAATATGGAAAACT+TGG | + | chr2.4:33944985-33945004 | MS.gene97410:CDS | 20.0% |
AAAATTCAATGGGACAAAGT+TGG | - | chr2.4:33944759-33944778 | None:intergenic | 30.0% | |
AAATTCAATGGGACAAAGTT+GGG | - | chr2.4:33944758-33944777 | None:intergenic | 30.0% | |
AACCTAAACCCAAAATTCAA+TGG | - | chr2.4:33944770-33944789 | None:intergenic | 30.0% | |
ACCTAAACCCAAAATTCAAT+GGG | - | chr2.4:33944769-33944788 | None:intergenic | 30.0% | |
TGAAAGTTATCATAAAGCCA+TGG | - | chr2.4:33944701-33944720 | None:intergenic | 30.0% | |
TGATAACTTTCATATCGTCA+TGG | + | chr2.4:33944709-33944728 | MS.gene97410:CDS | 30.0% | |
TTTGGTTAGATAAAGCCAAA+TGG | - | chr2.4:33944802-33944821 | None:intergenic | 30.0% | |
! | AACTTTGTCCCATTGAATTT+TGG | + | chr2.4:33944758-33944777 | MS.gene97410:intron | 30.0% |
! | ACTTTGTCCCATTGAATTTT+GGG | + | chr2.4:33944759-33944778 | MS.gene97410:intron | 30.0% |
AAACCAATGTCTCAAAGGAT+TGG | + | chr2.4:33945114-33945133 | MS.gene97410:CDS | 35.0% | |
AATTCAATGGGACAAAGTTG+GGG | - | chr2.4:33944757-33944776 | None:intergenic | 35.0% | |
AGGAGCTATGAATGGTATTT+CGG | - | chr2.4:33944876-33944895 | None:intergenic | 35.0% | |
AGTTATTGGACATACAGACA+AGG | + | chr2.4:33945029-33945048 | MS.gene97410:CDS | 35.0% | |
ATAGCAATCAACCACAGATT+TGG | - | chr2.4:33944627-33944646 | None:intergenic | 35.0% | |
ATCTAACCAAAAGTAGGTCA+AGG | + | chr2.4:33944811-33944830 | MS.gene97410:intron | 35.0% | |
ATCTCAAACCAATGTCTCAA+AGG | + | chr2.4:33945109-33945128 | MS.gene97410:CDS | 35.0% | |
ATGTTCCCTTGAAAAAAGAG+TGG | + | chr2.4:33944926-33944945 | MS.gene97410:CDS | 35.0% | |
CAAAAGTAGGTCAAGGTATA+GGG | + | chr2.4:33944818-33944837 | MS.gene97410:intron | 35.0% | |
GAGTTTCTTAGGTACTCTTA+AGG | + | chr2.4:33944840-33944859 | MS.gene97410:CDS | 35.0% | |
GTCTTAGAACACTGTTTGAT+AGG | + | chr2.4:33944512-33944531 | MS.gene97410:CDS | 35.0% | |
TAGGTTCATGGTTTACCATT+TGG | + | chr2.4:33944784-33944803 | MS.gene97410:intron | 35.0% | |
! | GGCTTTATCTAACCAAAAGT+AGG | + | chr2.4:33944805-33944824 | MS.gene97410:intron | 35.0% |
! | GTTTAGAGTGAGAACTTCAT+CGG | - | chr2.4:33944465-33944484 | None:intergenic | 35.0% |
!!! | AACTTGGTGTGTTTTATCAC+AGG | + | chr2.4:33945001-33945020 | MS.gene97410:CDS | 35.0% |
!!! | ACACACCACTCTTTTTTCAA+GGG | - | chr2.4:33944934-33944953 | None:intergenic | 35.0% |
!!! | GAATTTTGGGTTTAGGTTCA+TGG | + | chr2.4:33944772-33944791 | MS.gene97410:intron | 35.0% |
!!! | TCCCATTGAATTTTGGGTTT+AGG | + | chr2.4:33944765-33944784 | MS.gene97410:intron | 35.0% |
ACAAGCTTCAATGACCGTAT+GGG | + | chr2.4:33945258-33945277 | MS.gene97410:CDS | 40.0% | |
ACGCATATAGGAGCTATGAA+TGG | - | chr2.4:33944884-33944903 | None:intergenic | 40.0% | |
AGAAACCGAAACTGAAACTG+CGG | + | chr2.4:33944487-33944506 | MS.gene97410:CDS | 40.0% | |
AGATGATGAAGTTCGCAACT+GGG | + | chr2.4:33945080-33945099 | MS.gene97410:CDS | 40.0% | |
ATCTTGTAACCAACGATTGG+TGG | - | chr2.4:33945148-33945167 | None:intergenic | 40.0% | |
ATTCCAGCTCGAACAATTCA+GGG | - | chr2.4:33945059-33945078 | None:intergenic | 40.0% | |
CAAGGTATAGGGAGTTTCTT+AGG | + | chr2.4:33944829-33944848 | MS.gene97410:CDS | 40.0% | |
CAGTTTCAGTTTCGGTTTCT+AGG | - | chr2.4:33944487-33944506 | None:intergenic | 40.0% | |
CCAAAAGTAGGTCAAGGTAT+AGG | + | chr2.4:33944817-33944836 | MS.gene97410:intron | 40.0% | |
GGAGCTATGAATGGTATTTC+GGG | - | chr2.4:33944875-33944894 | None:intergenic | 40.0% | |
TACAAGCTTCAATGACCGTA+TGG | + | chr2.4:33945257-33945276 | MS.gene97410:CDS | 40.0% | |
TAGCTCCTATATGCGTATCA+AGG | + | chr2.4:33944888-33944907 | MS.gene97410:CDS | 40.0% | |
TATCACAGGTGTGGAGTTAT+TGG | + | chr2.4:33945015-33945034 | MS.gene97410:CDS | 40.0% | |
TCTCTTTCAATTCCACCACA+AGG | + | chr2.4:33944646-33944665 | MS.gene97410:CDS | 40.0% | |
! | CCTATACCTTGACCTACTTT+TGG | - | chr2.4:33944820-33944839 | None:intergenic | 40.0% |
!! | ATCAACCACAGATTTGGTGA+TGG | - | chr2.4:33944621-33944640 | None:intergenic | 40.0% |
!! | GTACCAATCCTTTGAGACAT+TGG | - | chr2.4:33945120-33945139 | None:intergenic | 40.0% |
!!! | GACACACCACTCTTTTTTCA+AGG | - | chr2.4:33944935-33944954 | None:intergenic | 40.0% |
AAAGCCATGGACCTTCATCA+AGG | - | chr2.4:33944688-33944707 | None:intergenic | 45.0% | |
AACAGTAGCACCGTGAGTAT+TGG | - | chr2.4:33945193-33945212 | None:intergenic | 45.0% | |
AGACATACGCTCGCTGAAAT+AGG | - | chr2.4:33944570-33944589 | None:intergenic | 45.0% | |
AGCCACCTTGATACGCATAT+AGG | - | chr2.4:33944896-33944915 | None:intergenic | 45.0% | |
AGTCACCATCACCAAATCTG+TGG | + | chr2.4:33944613-33944632 | MS.gene97410:CDS | 45.0% | |
CAGATGATGAAGTTCGCAAC+TGG | + | chr2.4:33945079-33945098 | MS.gene97410:CDS | 45.0% | |
CTCCTATATGCGTATCAAGG+TGG | + | chr2.4:33944891-33944910 | MS.gene97410:CDS | 45.0% | |
CTGTTTGATAGGTCGTGTCT+TGG | + | chr2.4:33944523-33944542 | MS.gene97410:CDS | 45.0% | |
CTTTCAATTCCACCACAAGG+TGG | + | chr2.4:33944649-33944668 | MS.gene97410:CDS | 45.0% | |
GAATAAGACCATCGAGGTTG+AGG | - | chr2.4:33944439-33944458 | None:intergenic | 45.0% | |
GATGATGAAGTTCGCAACTG+GGG | + | chr2.4:33945081-33945100 | MS.gene97410:CDS | 45.0% | |
GATTCCAGCTCGAACAATTC+AGG | - | chr2.4:33945060-33945079 | None:intergenic | 45.0% | |
GGGATCTTGTAACCAACGAT+TGG | - | chr2.4:33945151-33945170 | None:intergenic | 45.0% | |
GTCATGGATCGTATTTCTCC+CGG | + | chr2.4:33944725-33944744 | MS.gene97410:CDS | 45.0% | |
! | GGTGTGTTTTATCACAGGTG+TGG | + | chr2.4:33945006-33945025 | MS.gene97410:CDS | 45.0% |
!! | CAAAAGCACCATTGCTAGCA+CGG | - | chr2.4:33944957-33944976 | None:intergenic | 45.0% |
ACCATCGAGGTTGAGGTTTG+TGG | - | chr2.4:33944432-33944451 | None:intergenic | 50.0% | |
ACTGTGCATGTACCTTCAGC+AGG | - | chr2.4:33945237-33945256 | None:intergenic | 50.0% | |
AGCAGTGAGTTGTGTCTGGA+AGG | - | chr2.4:33945287-33945306 | None:intergenic | 50.0% | |
ATGCCCTGAATTGTTCGAGC+TGG | + | chr2.4:33945053-33945072 | MS.gene97410:CDS | 50.0% | |
ATGGACCTTCATCAAGGACG+CGG | - | chr2.4:33944682-33944701 | None:intergenic | 50.0% | |
CCATCGAGGTTGAGGTTTGT+GGG | - | chr2.4:33944431-33944450 | None:intergenic | 50.0% | |
CGGACAGAATAAGACCATCG+AGG | - | chr2.4:33944445-33944464 | None:intergenic | 50.0% | |
GACAGCCGCAGTTTCAGTTT+CGG | - | chr2.4:33944495-33944514 | None:intergenic | 50.0% | |
GCATAGCAGTGAGTTGTGTC+TGG | - | chr2.4:33945291-33945310 | None:intergenic | 50.0% | |
GCTCGCTGAAATAGGCGAAT+TGG | - | chr2.4:33944562-33944581 | None:intergenic | 50.0% | |
!! | ACCGTGAGTATTGGTTGGCA+CGG | - | chr2.4:33945184-33945203 | None:intergenic | 50.0% |
!! | GTAGCACCGTGAGTATTGGT+TGG | - | chr2.4:33945189-33945208 | None:intergenic | 50.0% |
ACAAAGTTGGGGACAGCACC+GGG | - | chr2.4:33944746-33944765 | None:intergenic | 55.0% | |
CCCACAAACCTCAACCTCGA+TGG | + | chr2.4:33944428-33944447 | MS.gene97410:CDS | 55.0% | |
GACAAAGTTGGGGACAGCAC+CGG | - | chr2.4:33944747-33944766 | None:intergenic | 55.0% | |
GCCGTGCCAACCAATACTCA+CGG | + | chr2.4:33945180-33945199 | MS.gene97410:CDS | 55.0% | |
GCGTCCTTGATGAAGGTCCA+TGG | + | chr2.4:33944681-33944700 | MS.gene97410:CDS | 55.0% | |
GTACTGCTGCCACCAATCGT+TGG | + | chr2.4:33945136-33945155 | MS.gene97410:CDS | 55.0% | |
TGGACCTTCATCAAGGACGC+GGG | - | chr2.4:33944681-33944700 | None:intergenic | 55.0% | |
TGGTGTGTCCGTGCTAGCAA+TGG | + | chr2.4:33944946-33944965 | MS.gene97410:CDS | 55.0% | |
TGTCTGGAAGGCAGCCCATA+CGG | - | chr2.4:33945275-33945294 | None:intergenic | 55.0% | |
! | GTGATGGTGACTCTCTTGCC+TGG | - | chr2.4:33944605-33944624 | None:intergenic | 55.0% |
! | TATTGGTTGGCACGGCAGCA+GGG | - | chr2.4:33945176-33945195 | None:intergenic | 55.0% |
ATGTCTCGCGCTTGGAAGCC+AGG | + | chr2.4:33944584-33944603 | MS.gene97410:CDS | 60.0% | |
CAGGTGTGTCTCGACCAGCA+GGG | - | chr2.4:33945218-33945237 | None:intergenic | 60.0% | |
GGTCGAGACACACCTGCTGA+AGG | + | chr2.4:33945222-33945241 | MS.gene97410:CDS | 60.0% | |
!! | GGTGCTACTGTTGTCCCTGC+TGG | + | chr2.4:33945201-33945220 | MS.gene97410:CDS | 60.0% |
!! | GTATTGGTTGGCACGGCAGC+AGG | - | chr2.4:33945177-33945196 | None:intergenic | 60.0% |
GCAGGTGTGTCTCGACCAGC+AGG | - | chr2.4:33945219-33945238 | None:intergenic | 65.0% | |
GCGAGCGTATGTCTCGCGCT+TGG | + | chr2.4:33944576-33944595 | MS.gene97410:CDS | 65.0% | |
GCTGCCCGCGTCCTTGATGA+AGG | + | chr2.4:33944674-33944693 | MS.gene97410:CDS | 65.0% | |
GGGCAGCATCCACCTTGTGG+TGG | - | chr2.4:33944661-33944680 | None:intergenic | 65.0% | |
GTTGGCACGGCAGCAGGGAT+GGG | - | chr2.4:33945171-33945190 | None:intergenic | 65.0% | |
CGCGGGCAGCATCCACCTTG+TGG | - | chr2.4:33944664-33944683 | None:intergenic | 70.0% | |
GGTTGGCACGGCAGCAGGGA+TGG | - | chr2.4:33945172-33945191 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 33944422 | 33945317 | 33944422 | ID=MS.gene97410 |
chr2.4 | mRNA | 33944422 | 33945317 | 33944422 | ID=MS.gene97410.t1;Parent=MS.gene97410 |
chr2.4 | exon | 33944422 | 33944746 | 33944422 | ID=MS.gene97410.t1.exon1;Parent=MS.gene97410.t1 |
chr2.4 | CDS | 33944422 | 33944746 | 33944422 | ID=cds.MS.gene97410.t1;Parent=MS.gene97410.t1 |
chr2.4 | exon | 33944827 | 33945317 | 33944827 | ID=MS.gene97410.t1.exon2;Parent=MS.gene97410.t1 |
chr2.4 | CDS | 33944827 | 33945317 | 33944827 | ID=cds.MS.gene97410.t1;Parent=MS.gene97410.t1 |
Gene Sequence |
Protein sequence |