Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09589.t1 | RHN74097.1 | 58.3 | 753 | 118 | 5 | 3 | 562 | 4 | 753 | 1.90E-222 | 782.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09589.t1 | A0A396JG42 | 58.3 | 753 | 118 | 5 | 3 | 562 | 4 | 753 | 1.4e-222 | 782.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09589.t1 | MTR_2g055450 | 66.981 | 106 | 20 | 1 | 564 | 669 | 246 | 336 | 8.69e-36 | 140 |
| MS.gene09589.t1 | MTR_8g463110 | 38.621 | 145 | 89 | 0 | 563 | 707 | 189 | 333 | 1.43e-27 | 119 |
| MS.gene09589.t1 | MTR_0042s0130 | 48.673 | 113 | 58 | 0 | 563 | 675 | 228 | 340 | 3.10e-27 | 114 |
| MS.gene09589.t1 | MTR_4g020630 | 36.842 | 152 | 96 | 0 | 557 | 708 | 119 | 270 | 2.28e-26 | 114 |
| MS.gene09589.t1 | MTR_1g051330 | 38.889 | 126 | 74 | 2 | 563 | 687 | 344 | 467 | 1.12e-20 | 97.4 |
| MS.gene09589.t1 | MTR_6g034215 | 34.921 | 126 | 82 | 0 | 569 | 694 | 199 | 324 | 8.76e-20 | 91.7 |
| MS.gene09589.t1 | MTR_1g100687 | 36.792 | 106 | 66 | 1 | 563 | 667 | 127 | 232 | 7.89e-17 | 80.9 |
| MS.gene09589.t1 | MTR_5g085210 | 48.214 | 56 | 29 | 0 | 653 | 708 | 5 | 60 | 2.66e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 179 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAATCTTTCTTCAGGTTTC+AGG | 0.118165 | 5.2:-7474580 | MS.gene09589:CDS |
| TCAGCTGCACAAATACTTTC+TGG | 0.213335 | 5.2:+7472932 | None:intergenic |
| AATATATATCTAGATGTTTC+TGG | 0.233510 | 5.2:-7474371 | MS.gene09589:CDS |
| TTGCAGTATTCTTGCACTTA+AGG | 0.275675 | 5.2:-7474609 | MS.gene09589:CDS |
| GAATCTCTTGTCTGGTGTTT+TGG | 0.285750 | 5.2:+7471617 | None:intergenic |
| GCATGGAAAACTTCGTATTA+AGG | 0.287571 | 5.2:+7471437 | None:intergenic |
| GCAAGGAGGGATGGCAGTTT+GGG | 0.288926 | 5.2:-7474657 | MS.gene09589:CDS |
| AGCAAGGAGGGATGGCAGTT+TGG | 0.292251 | 5.2:-7474658 | MS.gene09589:CDS |
| TGGCAGATTACTGCAAGTTT+TGG | 0.293942 | 5.2:-7474409 | MS.gene09589:CDS |
| TTTGAGTTGTTTAGGTCCTT+TGG | 0.294934 | 5.2:+7472697 | None:intergenic |
| AACAACATGCTAAGAAGTTT+TGG | 0.297303 | 5.2:-7471474 | MS.gene09589:CDS |
| TATTCTTGCACTTAAGGATA+TGG | 0.305828 | 5.2:-7474603 | MS.gene09589:CDS |
| GATATGGCTAATCTTTCTTC+AGG | 0.313274 | 5.2:-7474587 | MS.gene09589:CDS |
| AATTCTATTCAACTTTCTTC+TGG | 0.322665 | 5.2:+7471403 | None:intergenic |
| CAGTTTGGCCGGGTGAAGAT+TGG | 0.329897 | 5.2:-7473115 | MS.gene09589:CDS |
| GCGTCTCCGTGTTGCTCTTA+AGG | 0.332406 | 5.2:-7473464 | MS.gene09589:CDS |
| CATTGTGAGGTAATCGTAAA+AGG | 0.332606 | 5.2:+7473911 | None:intergenic |
| GGTGAAGATTGGGAGGGATT+TGG | 0.335441 | 5.2:-7473104 | MS.gene09589:CDS |
| TCCTTGCATAGCACGCTTCT+TGG | 0.336551 | 5.2:-7474429 | MS.gene09589:CDS |
| GATTGAGCAAGCTGCATAAC+TGG | 0.346165 | 5.2:+7472962 | None:intergenic |
| GATCCAACAAGGTGTTTGTT+TGG | 0.349383 | 5.2:-7473028 | MS.gene09589:CDS |
| GTGTGATCCGTACTGGTTCT+TGG | 0.349579 | 5.2:-7473699 | MS.gene09589:CDS |
| TCTCATCAGAAGGATCATTC+TGG | 0.360305 | 5.2:-7474497 | MS.gene09589:CDS |
| TCTCAACGATGGCAAGGTTA+TGG | 0.362232 | 5.2:-7471709 | MS.gene09589:CDS |
| CTGTTATGTTTGCGGCAGGT+TGG | 0.364300 | 5.2:-7473350 | MS.gene09589:CDS |
| AAATCATAGTTGGAATTTGC+AGG | 0.366262 | 5.2:+7473843 | None:intergenic |
| TCTCCAAACAAACACCTTGT+TGG | 0.366311 | 5.2:+7473025 | None:intergenic |
| TGATTTGTTGGACTGCTGTT+TGG | 0.381921 | 5.2:-7473826 | MS.gene09589:intron |
| GTGTTGTGGATCTATCTAAA+TGG | 0.384569 | 5.2:-7471654 | MS.gene09589:CDS |
| TGTTTCTGGAAGCAACCTTC+AGG | 0.391835 | 5.2:-7474357 | MS.gene09589:intron |
| TCTTTCAATCATGCTCAGTT+TGG | 0.393491 | 5.2:-7473130 | MS.gene09589:CDS |
| CCGCAACCTGTGCCTAGTTC+CGG | 0.393754 | 5.2:-7471793 | MS.gene09589:CDS |
| GATAATTTCTGTTATGTTTG+CGG | 0.400723 | 5.2:-7473358 | MS.gene09589:CDS |
| GCCTCCTATATCACACTTAA+CGG | 0.404305 | 5.2:-7472804 | MS.gene09589:CDS |
| TGTTATGTTTGCGGCAGGTT+GGG | 0.409593 | 5.2:-7473349 | MS.gene09589:CDS |
| TCAATCATGCTCAGTTTGGC+CGG | 0.410305 | 5.2:-7473126 | MS.gene09589:CDS |
| AAATTCCAACTATGATTTGT+TGG | 0.415665 | 5.2:-7473838 | MS.gene09589:CDS |
| AGTGTTGTCAGCATGGAAAT+TGG | 0.417558 | 5.2:+7473884 | None:intergenic |
| ATCACACTTAACGGCATCAT+TGG | 0.420382 | 5.2:-7472795 | MS.gene09589:CDS |
| TTAAGCTTGTGAATGGTACT+TGG | 0.421722 | 5.2:-7473060 | MS.gene09589:CDS |
| TATTCTTCGTGCTGAATTCA+AGG | 0.423524 | 5.2:-7473257 | MS.gene09589:CDS |
| GTTAAAATAACTAACATTAG+AGG | 0.423719 | 5.2:+7471549 | None:intergenic |
| GATGCCGTTAAGTGTGATAT+AGG | 0.424134 | 5.2:+7472800 | None:intergenic |
| AGAACCTCTTGTGGCGAGTT+GGG | 0.425908 | 5.2:-7473437 | MS.gene09589:CDS |
| TCATCACTAACTGTCGGATT+AGG | 0.434896 | 5.2:+7472740 | None:intergenic |
| TGTTGAAGAAGGCAAGCGTT+GGG | 0.435153 | 5.2:-7473284 | MS.gene09589:CDS |
| GGATGGCAGTTTGGGGAAGC+AGG | 0.438798 | 5.2:-7474649 | MS.gene09589:CDS |
| AGTTTGGCCGGGTGAAGATT+GGG | 0.444737 | 5.2:-7473114 | MS.gene09589:CDS |
| GAAGACAATTATGTTGAAGA+AGG | 0.444839 | 5.2:-7473295 | MS.gene09589:CDS |
| AAAGCGAAAGCGACATTGAC+CGG | 0.451446 | 5.2:+7471774 | None:intergenic |
| TAACATGTTAAGACATAGGT+TGG | 0.453146 | 5.2:-7471530 | MS.gene09589:CDS |
| TAGTGATTGTTTCGAATGAT+TGG | 0.456799 | 5.2:-7474779 | None:intergenic |
| GCATGATGGCATGGGTCTAC+TGG | 0.458868 | 5.2:-7473158 | MS.gene09589:CDS |
| ATGCTGAAGGTTGGCCTAAG+TGG | 0.459601 | 5.2:-7472767 | MS.gene09589:CDS |
| TTCTGGTGCTTGCTGCCGCA+TGG | 0.460411 | 5.2:+7471420 | None:intergenic |
| GGCTAGTTGAACCTGAGTTT+AGG | 0.461625 | 5.2:-7471741 | MS.gene09589:CDS |
| AGTCTTACGAATCTCTTGTC+TGG | 0.465492 | 5.2:+7471609 | None:intergenic |
| TGAGGAACGCATTGCACGAT+TGG | 0.468509 | 5.2:-7472903 | MS.gene09589:CDS |
| GAATTCAAGGGCAGCAGTAC+CGG | 0.468900 | 5.2:-7473244 | MS.gene09589:CDS |
| ATAAATATCATTCAGTATCA+AGG | 0.473958 | 5.2:-7473993 | MS.gene09589:CDS |
| TGATCAAAGATGATATGTTC+TGG | 0.475541 | 5.2:-7471498 | MS.gene09589:CDS |
| TTGAATTCAGCACGAAGAAT+AGG | 0.480103 | 5.2:+7473259 | None:intergenic |
| GCAGTCCAACAAATCATAGT+TGG | 0.480755 | 5.2:+7473833 | None:intergenic |
| TTGGTGTTACGCTCTCTGTT+TGG | 0.485697 | 5.2:-7474760 | MS.gene09589:CDS |
| CCGGAGGGGTTGACAATCAA+TGG | 0.488317 | 5.2:-7473225 | MS.gene09589:CDS |
| CTGGATCAGTGATGCATGGT+AGG | 0.490003 | 5.2:-7474478 | MS.gene09589:CDS |
| GAGTTGTTTAGGTCCTTTGG+AGG | 0.492404 | 5.2:+7472700 | None:intergenic |
| CAATCATGCTCAGTTTGGCC+GGG | 0.496015 | 5.2:-7473125 | MS.gene09589:CDS |
| AGGGTAGTGATCAGAAGATG+TGG | 0.496508 | 5.2:+7471834 | None:intergenic |
| GTTTCAGTTCTTCCATCGTA+AGG | 0.498528 | 5.2:-7473731 | MS.gene09589:intron |
| CGACCCAACAACTACTCTGT+TGG | 0.503641 | 5.2:-7473629 | MS.gene09589:CDS |
| ATTTCTGTTATGTTTGCGGC+AGG | 0.508708 | 5.2:-7473354 | MS.gene09589:CDS |
| AATCCGACAGTTAGTGATGA+TGG | 0.510269 | 5.2:-7472737 | MS.gene09589:CDS |
| GGTGTTTGTTTCTCATCAGA+AGG | 0.511185 | 5.2:-7474507 | MS.gene09589:CDS |
| TGTCCAACAGAGTAGTTGTT+GGG | 0.515953 | 5.2:+7473626 | None:intergenic |
| TGGTGCGATGCATGATGGCA+TGG | 0.518435 | 5.2:-7473167 | MS.gene09589:CDS |
| ATGGAGCGTGTGATCCGTAC+TGG | 0.518491 | 5.2:-7473706 | MS.gene09589:CDS |
| CCATTGATTGTCAACCCCTC+CGG | 0.524266 | 5.2:+7473225 | None:intergenic |
| AAGGACCTAAACAACTCAAA+AGG | 0.526078 | 5.2:-7472694 | MS.gene09589:CDS |
| TCATAATGATAGCTATTGTC+CGG | 0.526404 | 5.2:-7473326 | MS.gene09589:CDS |
| GAGAACCTCTTGTGGCGAGT+TGG | 0.526455 | 5.2:-7473438 | MS.gene09589:CDS |
| TACTAGTCATAAGGTGCGTA+CGG | 0.533773 | 5.2:-7474543 | MS.gene09589:CDS |
| TAAGCTTGTGAATGGTACTT+GGG | 0.533951 | 5.2:-7473059 | MS.gene09589:CDS |
| TTCTGATGGTGGTCAAGATA+CGG | 0.534188 | 5.2:-7472600 | MS.gene09589:CDS |
| GTGTCCAACAGAGTAGTTGT+TGG | 0.535599 | 5.2:+7473625 | None:intergenic |
| AAGCGACATTGACCGGAACT+AGG | 0.537113 | 5.2:+7471781 | None:intergenic |
| TTAAGTGTGATATAGGAGGC+TGG | 0.537612 | 5.2:+7472807 | None:intergenic |
| ATCAATGGCTTCATGATAGT+AGG | 0.538858 | 5.2:-7473210 | MS.gene09589:CDS |
| AAGGAAGGTGTTAAGATGAA+AGG | 0.548628 | 5.2:-7472632 | MS.gene09589:CDS |
| GCCAAGAAGCGTGCTATGCA+AGG | 0.549192 | 5.2:+7474428 | None:intergenic |
| TGCAATTTGATTGAATGTGA+AGG | 0.551860 | 5.2:+7473967 | None:intergenic |
| GGTAATCGTAAAAGGTATGA+AGG | 0.554633 | 5.2:+7473919 | None:intergenic |
| GAAAGTGCTCCGTCCGATGT+TGG | 0.555466 | 5.2:-7472845 | MS.gene09589:CDS |
| TAATTGTCTTCATAACGATC+CGG | 0.556135 | 5.2:+7473307 | None:intergenic |
| CCGGAACTAGGCACAGGTTG+CGG | 0.558797 | 5.2:+7471793 | None:intergenic |
| ATGTTGAAGAAGGCAAGCGT+TGG | 0.560092 | 5.2:-7473285 | MS.gene09589:CDS |
| GTTCTGCAGAAAGTCTCCTT+CGG | 0.562217 | 5.2:-7473655 | MS.gene09589:CDS |
| CTGACAACACTACTGCCAAT+CGG | 0.562524 | 5.2:-7473872 | MS.gene09589:CDS |
| TGATTGAGTTTATTCACAAG+AGG | 0.564259 | 5.2:+7471679 | None:intergenic |
| AGGAACATGATGAGCAAGGA+GGG | 0.565067 | 5.2:-7474670 | MS.gene09589:CDS |
| TGGCAGTAGTGTTGTCAGCA+TGG | 0.565117 | 5.2:+7473877 | None:intergenic |
| ATTTGCAGGAGCAGACCGAT+TGG | 0.566589 | 5.2:+7473857 | None:intergenic |
| ATGCAGCTTGCTCAATCTCA+TGG | 0.570432 | 5.2:-7472956 | MS.gene09589:CDS |
| GAGACTTTCTGCAGAACTAG+AGG | 0.570603 | 5.2:+7473661 | None:intergenic |
| GTTCTTCCATCGTAAGGACA+TGG | 0.572999 | 5.2:-7473725 | MS.gene09589:CDS |
| TAAGTGTGATATAGGAGGCT+GGG | 0.573965 | 5.2:+7472808 | None:intergenic |
| CAAAGAGCCAAGAACCAGTA+CGG | 0.576391 | 5.2:+7473692 | None:intergenic |
| ACATGATGAGCAAGGAGGGA+TGG | 0.576695 | 5.2:-7474666 | MS.gene09589:CDS |
| GCGTACGGTCTCATGTGGTA+TGG | 0.576892 | 5.2:-7474528 | MS.gene09589:CDS |
| CACGATTGGTTCAAGAAGCT+AGG | 0.577031 | 5.2:-7472889 | MS.gene09589:CDS |
| TTTGTTTCTCAACGATGGCA+AGG | 0.577495 | 5.2:-7471715 | MS.gene09589:CDS |
| AAAGTTAAGATTACCTCCAA+AGG | 0.580614 | 5.2:-7472713 | MS.gene09589:CDS |
| TCGGATTAGGCATCCCACTT+AGG | 0.581025 | 5.2:+7472753 | None:intergenic |
| TGGTCAAGATACGGCTAGCA+AGG | 0.581487 | 5.2:-7472591 | MS.gene09589:CDS |
| GGTCGTTTGTTTCTCAACGA+TGG | 0.581511 | 5.2:-7471720 | MS.gene09589:CDS |
| ATCATTGGCGCATATGCTGA+AGG | 0.584783 | 5.2:-7472780 | MS.gene09589:CDS |
| GGCTCTAATGATTCTGATGG+TGG | 0.586250 | 5.2:-7472611 | MS.gene09589:CDS |
| GGAGCACAATCTAACAAAAG+AGG | 0.587191 | 5.2:+7471814 | None:intergenic |
| TAAACTCAATCAATGTGTTG+TGG | 0.587729 | 5.2:-7471668 | MS.gene09589:CDS |
| CTCCGTGTTGCTCTTAAGGT+AGG | 0.589648 | 5.2:-7473460 | MS.gene09589:CDS |
| TTCAAGGGCAGCAGTACCGG+AGG | 0.590534 | 5.2:-7473241 | MS.gene09589:CDS |
| AATGCCCAACTCGCCACAAG+AGG | 0.591640 | 5.2:+7473433 | None:intergenic |
| ACAACTCAAAAGGCTCCGCA+TGG | 0.592337 | 5.2:-7472684 | MS.gene09589:CDS |
| AGTTGTTGGGTCGTCACCGA+AGG | 0.593580 | 5.2:+7473639 | None:intergenic |
| TTGGCGCATATGCTGAAGGT+TGG | 0.594650 | 5.2:-7472776 | MS.gene09589:CDS |
| TGGCAGTTTGGGGAAGCAGG+AGG | 0.595632 | 5.2:-7474646 | MS.gene09589:CDS |
| TTACCATCATCACTAACTGT+CGG | 0.595839 | 5.2:+7472734 | None:intergenic |
| TGATATAGGAGGCTGGGCAG+CGG | 0.596815 | 5.2:+7472814 | None:intergenic |
| ATTCTTCGTGCTGAATTCAA+GGG | 0.599382 | 5.2:-7473256 | MS.gene09589:CDS |
| TGGATCAGTGATGCATGGTA+GGG | 0.601776 | 5.2:-7474477 | MS.gene09589:CDS |
| GTGATGCTTTACCAACATGT+AGG | 0.602333 | 5.2:-7474709 | MS.gene09589:CDS |
| GGAGCACTTTCAATTGAGAG+AGG | 0.605273 | 5.2:+7472857 | None:intergenic |
| AGACTTTCTGCAGAACTAGA+GGG | 0.607559 | 5.2:+7473662 | None:intergenic |
| GGACACTGTTGAGAAGACTA+AGG | 0.607998 | 5.2:-7472651 | MS.gene09589:CDS |
| CATTGACCGGAACTAGGCAC+AGG | 0.609205 | 5.2:+7471787 | None:intergenic |
| GAGCACAATCTAACAAAAGA+GGG | 0.611142 | 5.2:+7471815 | None:intergenic |
| AAAGGCTCTAATGATTCTGA+TGG | 0.611789 | 5.2:-7472614 | MS.gene09589:CDS |
| CAAGGAGGGATGGCAGTTTG+GGG | 0.612120 | 5.2:-7474656 | MS.gene09589:CDS |
| GGTGCGATGCATGATGGCAT+GGG | 0.614147 | 5.2:-7473166 | MS.gene09589:CDS |
| TGCTGAAGGTTGGCCTAAGT+GGG | 0.618386 | 5.2:-7472766 | MS.gene09589:CDS |
| TTGGCCGGGTGAAGATTGGG+AGG | 0.623223 | 5.2:-7473111 | MS.gene09589:CDS |
| GAGTTGGGCATTTGAAAGAG+AGG | 0.624526 | 5.2:-7473422 | MS.gene09589:CDS |
| GTTGAAGAAGGCAAGCGTTG+GGG | 0.624795 | 5.2:-7473283 | MS.gene09589:CDS |
| TAGAGGTATCCACATGGGAA+CGG | 0.624876 | 5.2:+7471566 | None:intergenic |
| AGCAATGGTGCGATGCATGA+TGG | 0.624888 | 5.2:-7473172 | MS.gene09589:CDS |
| TTAAGTGCAAGAATACTGCA+AGG | 0.627344 | 5.2:+7474611 | None:intergenic |
| CTTCATGATAGTAGGAAGAG+TGG | 0.630322 | 5.2:-7473202 | MS.gene09589:CDS |
| TGGAGAAAGAGTACCGCAAG+TGG | 0.634080 | 5.2:-7473008 | MS.gene09589:CDS |
| CATTCTGGATCAGTGATGCA+TGG | 0.636659 | 5.2:-7474482 | MS.gene09589:CDS |
| AATCCCTCCCAATCTTCACC+CGG | 0.637645 | 5.2:+7473107 | None:intergenic |
| TAGGAGTATAGATGTTACAA+AGG | 0.638418 | 5.2:-7474690 | MS.gene09589:CDS |
| AGTTGGGCATTTGAAAGAGA+GGG | 0.638703 | 5.2:-7473421 | MS.gene09589:CDS |
| TAAGGTAGGAGAACCTCTTG+TGG | 0.640323 | 5.2:-7473446 | MS.gene09589:CDS |
| TCAAGGGCAGCAGTACCGGA+GGG | 0.642793 | 5.2:-7473240 | MS.gene09589:CDS |
| CAGAGACGAGAAGAAAGTAA+CGG | 0.643279 | 5.2:+7474731 | None:intergenic |
| TGGCCGGGTGAAGATTGGGA+GGG | 0.646391 | 5.2:-7473110 | MS.gene09589:CDS |
| CACGCTCCATGTCCTTACGA+TGG | 0.647172 | 5.2:+7473719 | None:intergenic |
| ACAAAGGAACATGATGAGCA+AGG | 0.647269 | 5.2:-7474674 | MS.gene09589:CDS |
| ACTGTTGAGAAGACTAAGGA+AGG | 0.648597 | 5.2:-7472647 | MS.gene09589:CDS |
| CAAGGGCAGCAGTACCGGAG+GGG | 0.649711 | 5.2:-7473239 | MS.gene09589:CDS |
| GAAACAAACGACCTAAACTC+AGG | 0.657149 | 5.2:+7471730 | None:intergenic |
| ACATCTATACTCCTACATGT+TGG | 0.657176 | 5.2:+7474698 | None:intergenic |
| AAGGTGCGTACGGTCTCATG+TGG | 0.658060 | 5.2:-7474533 | MS.gene09589:CDS |
| GCTTTCGCTTTGAGAATGCG+TGG | 0.659513 | 5.2:-7471762 | MS.gene09589:CDS |
| AACATTAGAGGTATCCACAT+GGG | 0.659561 | 5.2:+7471561 | None:intergenic |
| GCTCCGCATGGAAGAACTCG+AGG | 0.659574 | 5.2:-7472672 | MS.gene09589:CDS |
| GGAAATTGGAAGCCATTGTG+AGG | 0.668368 | 5.2:+7473898 | None:intergenic |
| TAAGTGCAAGAATACTGCAA+GGG | 0.673958 | 5.2:+7474612 | None:intergenic |
| TGAAGCTATCCGTTCCCATG+TGG | 0.674747 | 5.2:-7471575 | MS.gene09589:CDS |
| CATGATAGTAGGAAGAGTGG+TGG | 0.681655 | 5.2:-7473199 | MS.gene09589:CDS |
| CTCCTACCTTAAGAGCAACA+CGG | 0.682970 | 5.2:+7473458 | None:intergenic |
| GCCGTTAAGTGTGATATAGG+AGG | 0.683079 | 5.2:+7472803 | None:intergenic |
| AAGAGTGGTGGTGAGAGCAA+TGG | 0.684123 | 5.2:-7473187 | MS.gene09589:CDS |
| GTATTAGAACCAACATCGGA+CGG | 0.684945 | 5.2:+7472836 | None:intergenic |
| AGCGGTATTAGAACCAACAT+CGG | 0.697326 | 5.2:+7472832 | None:intergenic |
| TTGTGCAGCTGAAAGTGATG+AGG | 0.702639 | 5.2:-7472921 | MS.gene09589:CDS |
| AAGGAACATGATGAGCAAGG+AGG | 0.709557 | 5.2:-7474671 | MS.gene09589:CDS |
| TAACATTAGAGGTATCCACA+TGG | 0.718961 | 5.2:+7471560 | None:intergenic |
| TGTCCTCGAGTTCTTCCATG+CGG | 0.726264 | 5.2:+7472669 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAGAATAAATAAATTTATG+AGG | + | chr5.2:7471855-7471874 | None:intergenic | 15.0% |
| !! | ATTACAAAAATATGTTTCTT+TGG | - | chr5.2:7472033-7472052 | MS.gene09589:intron | 15.0% |
| !! | TATTCTCTAAATATGTTTAT+TGG | - | chr5.2:7471867-7471886 | MS.gene09589:intron | 15.0% |
| !!! | AACATCTAGATATATATTTT+TGG | + | chr5.2:7471802-7471821 | None:intergenic | 15.0% |
| !!! | ATTGAATATCCAATATATTT+TGG | + | chr5.2:7472061-7472080 | None:intergenic | 15.0% |
| !!! | TATATTTTCTTTTCATATCT+TGG | - | chr5.2:7471983-7472002 | MS.gene09589:intron | 15.0% |
| !!! | TTGAATATCCAATATATTTT+GGG | + | chr5.2:7472060-7472079 | None:intergenic | 15.0% |
| !! | AAATATACACCAAATAAACT+TGG | + | chr5.2:7471895-7471914 | None:intergenic | 20.0% |
| !! | AATATATATCTAGATGTTTC+TGG | - | chr5.2:7471804-7471823 | MS.gene09589:CDS | 20.0% |
| !! | ATAAATATCATTCAGTATCA+AGG | - | chr5.2:7472182-7472201 | MS.gene09589:intron | 20.0% |
| !! | GTTAAAATAACTAACATTAG+AGG | + | chr5.2:7474629-7474648 | None:intergenic | 20.0% |
| !! | TGAAGAATTGAAATATATGT+TGG | - | chr5.2:7473817-7473836 | MS.gene09589:intron | 20.0% |
| !!! | AGAATAATTTTGATTCTTGA+AGG | - | chr5.2:7472680-7472699 | MS.gene09589:CDS | 20.0% |
| !!! | ATTTTAACATGTTAAGACAT+AGG | - | chr5.2:7474641-7474660 | MS.gene09589:CDS | 20.0% |
| ! | ATGTGGGATTAATAATGTAA+TGG | - | chr5.2:7473632-7473651 | MS.gene09589:CDS | 25.0% |
| ! | GATAATTTCTGTTATGTTTG+CGG | - | chr5.2:7472817-7472836 | MS.gene09589:CDS | 25.0% |
| ! | TTATTGGATCCAAGTTTATT+TGG | - | chr5.2:7471883-7471902 | MS.gene09589:intron | 25.0% |
| ! | TTTAAATTAGGAACTATGCT+CGG | + | chr5.2:7473728-7473747 | None:intergenic | 25.0% |
| !! | AAATTCCAACTATGATTTGT+TGG | - | chr5.2:7472337-7472356 | MS.gene09589:intron | 25.0% |
| !! | CTCCATATCAATATGATTTT+GGG | + | chr5.2:7473939-7473958 | None:intergenic | 25.0% |
| !!! | ATTTGGTGTATATTTTTGAG+AGG | - | chr5.2:7471900-7471919 | MS.gene09589:intron | 25.0% |
| !!! | ATTTGTTTGGTTTTTATTGC+TGG | - | chr5.2:7472106-7472125 | MS.gene09589:intron | 25.0% |
| !!! | TATTTTTGAGAGGATATACT+TGG | - | chr5.2:7471910-7471929 | MS.gene09589:intron | 25.0% |
| AAAGTTAAGATTACCTCCAA+AGG | - | chr5.2:7473462-7473481 | MS.gene09589:CDS | 30.0% | |
| AAATCACCAATAATACACCA+AGG | + | chr5.2:7474079-7474098 | None:intergenic | 30.0% | |
| AAATCATAGTTGGAATTTGC+AGG | + | chr5.2:7472335-7472354 | None:intergenic | 30.0% | |
| CCAAAATCATATTGATATGG+AGG | - | chr5.2:7473937-7473956 | MS.gene09589:CDS | 30.0% | |
| CTCCCAAAATCATATTGATA+TGG | - | chr5.2:7473934-7473953 | MS.gene09589:CDS | 30.0% | |
| CTTACTGATATTCATATGGA+TGG | - | chr5.2:7474193-7474212 | MS.gene09589:intron | 30.0% | |
| GAAGACAATTATGTTGAAGA+AGG | - | chr5.2:7472880-7472899 | MS.gene09589:CDS | 30.0% | |
| TAAACTCAATCAATGTGTTG+TGG | - | chr5.2:7474507-7474526 | MS.gene09589:CDS | 30.0% | |
| TAACATGTTAAGACATAGGT+TGG | - | chr5.2:7474645-7474664 | MS.gene09589:CDS | 30.0% | |
| TAATTGTCTTCATAACGATC+CGG | + | chr5.2:7472871-7472890 | None:intergenic | 30.0% | |
| TATTCTTGCACTTAAGGATA+TGG | - | chr5.2:7471572-7471591 | MS.gene09589:CDS | 30.0% | |
| TCATAATGATAGCTATTGTC+CGG | - | chr5.2:7472849-7472868 | MS.gene09589:CDS | 30.0% | |
| TCTTTGGTCCCAAAATATAT+TGG | - | chr5.2:7472049-7472068 | MS.gene09589:intron | 30.0% | |
| TGATCAAAGATGATATGTTC+TGG | - | chr5.2:7474677-7474696 | MS.gene09589:CDS | 30.0% | |
| TGATTGAGTTTATTCACAAG+AGG | + | chr5.2:7474499-7474518 | None:intergenic | 30.0% | |
| TGCAATTTGATTGAATGTGA+AGG | + | chr5.2:7472211-7472230 | None:intergenic | 30.0% | |
| TGGACTTACTGATATTCATA+TGG | - | chr5.2:7474189-7474208 | MS.gene09589:intron | 30.0% | |
| TGGGATTAATAATGTAATGG+CGG | - | chr5.2:7473635-7473654 | MS.gene09589:CDS | 30.0% | |
| TTAAATTAGGAACTATGCTC+GGG | + | chr5.2:7473727-7473746 | None:intergenic | 30.0% | |
| ! | AACAACATGCTAAGAAGTTT+TGG | - | chr5.2:7474701-7474720 | MS.gene09589:CDS | 30.0% |
| ! | CAAGGAAAATGAGTCTTATA+TGG | - | chr5.2:7473678-7473697 | MS.gene09589:CDS | 30.0% |
| ! | CATATAAGACTCATTTTCCT+TGG | + | chr5.2:7473680-7473699 | None:intergenic | 30.0% |
| ! | CCTCCATATCAATATGATTT+TGG | + | chr5.2:7473940-7473959 | None:intergenic | 30.0% |
| ! | CTAATTTAAAGTACCTAGTC+CGG | - | chr5.2:7473738-7473757 | MS.gene09589:intron | 30.0% |
| ! | TAGGAGTATAGATGTTACAA+AGG | - | chr5.2:7471485-7471504 | MS.gene09589:CDS | 30.0% |
| ! | TGGTTTTTATTGCTGGATAT+GGG | - | chr5.2:7472113-7472132 | MS.gene09589:intron | 30.0% |
| ! | TGTTTTTCTGTTGATCGTAT+TGG | - | chr5.2:7473851-7473870 | MS.gene09589:CDS | 30.0% |
| ! | TTAATACGAAGTTTTCCATG+CGG | - | chr5.2:7474740-7474759 | MS.gene09589:CDS | 30.0% |
| ! | TTCGTAAAGCAAGATTTGTT+TGG | - | chr5.2:7472093-7472112 | MS.gene09589:intron | 30.0% |
| !! | TCTTTTCATATCTTGGTTTG+TGG | - | chr5.2:7471990-7472009 | MS.gene09589:intron | 30.0% |
| !! | TTGGTTTTTATTGCTGGATA+TGG | - | chr5.2:7472112-7472131 | MS.gene09589:intron | 30.0% |
| !!! | CTGTTTTTTAAGCTTGTGAA+TGG | - | chr5.2:7473108-7473127 | MS.gene09589:CDS | 30.0% |
| AAGGACCTAAACAACTCAAA+AGG | - | chr5.2:7473481-7473500 | MS.gene09589:intron | 35.0% | |
| ACATCTATACTCCTACATGT+TGG | + | chr5.2:7471480-7471499 | None:intergenic | 35.0% | |
| AGAGAAATTGGATAGAGCTA+TGG | - | chr5.2:7474264-7474283 | MS.gene09589:intron | 35.0% | |
| ATCAATGGCTTCATGATAGT+AGG | - | chr5.2:7472965-7472984 | MS.gene09589:CDS | 35.0% | |
| ATTCTTCGTGCTGAATTCAA+GGG | - | chr5.2:7472919-7472938 | MS.gene09589:CDS | 35.0% | |
| CATTGTGAGGTAATCGTAAA+AGG | + | chr5.2:7472267-7472286 | None:intergenic | 35.0% | |
| CCAAGGAAGTTGAGAAATAT+TGG | + | chr5.2:7474062-7474081 | None:intergenic | 35.0% | |
| CCAATATTTCTCAACTTCCT+TGG | - | chr5.2:7474059-7474078 | MS.gene09589:intron | 35.0% | |
| CTATCCACTGATGAAAAGAA+AGG | - | chr5.2:7474109-7474128 | MS.gene09589:intron | 35.0% | |
| GAGCACAATCTAACAAAAGA+GGG | + | chr5.2:7474363-7474382 | None:intergenic | 35.0% | |
| GATATGGCTAATCTTTCTTC+AGG | - | chr5.2:7471588-7471607 | MS.gene09589:CDS | 35.0% | |
| GATTATTGCATCCGGTTTAT+AGG | + | chr5.2:7473765-7473784 | None:intergenic | 35.0% | |
| GATTCTGTCATGAAACCAAA+TGG | + | chr5.2:7472607-7472626 | None:intergenic | 35.0% | |
| GCATGGAAAACTTCGTATTA+AGG | + | chr5.2:7474741-7474760 | None:intergenic | 35.0% | |
| GGGATTAATAATGTAATGGC+GGG | - | chr5.2:7473636-7473655 | MS.gene09589:CDS | 35.0% | |
| GGTTTCATGACAGAATCAAT+GGG | - | chr5.2:7472610-7472629 | MS.gene09589:CDS | 35.0% | |
| GTGTTGTGGATCTATCTAAA+TGG | - | chr5.2:7474521-7474540 | MS.gene09589:CDS | 35.0% | |
| TAAGCTTGTGAATGGTACTT+GGG | - | chr5.2:7473116-7473135 | MS.gene09589:CDS | 35.0% | |
| TAAGTGCAAGAATACTGCAA+GGG | + | chr5.2:7471566-7471585 | None:intergenic | 35.0% | |
| TAGCAAGGATGTTGTTATGA+GGG | - | chr5.2:7473599-7473618 | MS.gene09589:intron | 35.0% | |
| TATTCTTCGTGCTGAATTCA+AGG | - | chr5.2:7472918-7472937 | MS.gene09589:CDS | 35.0% | |
| TCTTTCAATCATGCTCAGTT+TGG | - | chr5.2:7473045-7473064 | MS.gene09589:CDS | 35.0% | |
| TGGTTTCATGACAGAATCAA+TGG | - | chr5.2:7472609-7472628 | MS.gene09589:CDS | 35.0% | |
| TTAAGCTTGTGAATGGTACT+TGG | - | chr5.2:7473115-7473134 | MS.gene09589:CDS | 35.0% | |
| TTAAGTGCAAGAATACTGCA+AGG | + | chr5.2:7471567-7471586 | None:intergenic | 35.0% | |
| TTACCATCATCACTAACTGT+CGG | + | chr5.2:7473444-7473463 | None:intergenic | 35.0% | |
| TTCACTTGGTTCAAAAGTCT+TGG | - | chr5.2:7474223-7474242 | MS.gene09589:intron | 35.0% | |
| TTGAATTCAGCACGAAGAAT+AGG | + | chr5.2:7472919-7472938 | None:intergenic | 35.0% | |
| TTGCAGTATTCTTGCACTTA+AGG | - | chr5.2:7471566-7471585 | MS.gene09589:CDS | 35.0% | |
| ! | AAAGGCTCTAATGATTCTGA+TGG | - | chr5.2:7473561-7473580 | MS.gene09589:intron | 35.0% |
| ! | ATAAGACTCATTTTCCTTGG+CGG | + | chr5.2:7473677-7473696 | None:intergenic | 35.0% |
| ! | CAACTTCCTTGGTGTATTAT+TGG | - | chr5.2:7474070-7474089 | MS.gene09589:intron | 35.0% |
| ! | CGGACTAGGTACTTTAAATT+AGG | + | chr5.2:7473740-7473759 | None:intergenic | 35.0% |
| ! | CTAATCTTTCTTCAGGTTTC+AGG | - | chr5.2:7471595-7471614 | MS.gene09589:CDS | 35.0% |
| ! | CTTTTACGATTACCTCACAA+TGG | - | chr5.2:7472265-7472284 | MS.gene09589:intron | 35.0% |
| ! | GGAAAATGAGTCTTATATGG+TGG | - | chr5.2:7473681-7473700 | MS.gene09589:CDS | 35.0% |
| ! | GGTAATCGTAAAAGGTATGA+AGG | + | chr5.2:7472259-7472278 | None:intergenic | 35.0% |
| ! | GTTTTGCACTACTAGTCATA+AGG | - | chr5.2:7471623-7471642 | MS.gene09589:CDS | 35.0% |
| ! | TGGAGGTTAACTGGATTTTA+TGG | - | chr5.2:7473983-7474002 | MS.gene09589:CDS | 35.0% |
| ! | TTCTGTTGATCGTATTGGTA+GGG | - | chr5.2:7473856-7473875 | MS.gene09589:CDS | 35.0% |
| ! | TTTCTGTTGATCGTATTGGT+AGG | - | chr5.2:7473855-7473874 | MS.gene09589:CDS | 35.0% |
| !! | AACATTAGAGGTATCCACAT+GGG | + | chr5.2:7474617-7474636 | None:intergenic | 35.0% |
| !! | AAGAAGTTTTGGTATCGTGA+TGG | - | chr5.2:7474712-7474731 | MS.gene09589:CDS | 35.0% |
| !! | AAGGAAGGTGTTAAGATGAA+AGG | - | chr5.2:7473543-7473562 | MS.gene09589:intron | 35.0% |
| !! | AGAAGTTTTGGTATCGTGAT+GGG | - | chr5.2:7474713-7474732 | MS.gene09589:CDS | 35.0% |
| !! | TAACATTAGAGGTATCCACA+TGG | + | chr5.2:7474618-7474637 | None:intergenic | 35.0% |
| !! | TTTCATATCTTGGTTTGTGG+CGG | - | chr5.2:7471993-7472012 | MS.gene09589:intron | 35.0% |
| !! | TTTGAGTTGTTTAGGTCCTT+TGG | + | chr5.2:7473481-7473500 | None:intergenic | 35.0% |
| AATCCGACAGTTAGTGATGA+TGG | - | chr5.2:7473438-7473457 | MS.gene09589:CDS | 40.0% | |
| ACAAAGGAACATGATGAGCA+AGG | - | chr5.2:7471501-7471520 | MS.gene09589:CDS | 40.0% | |
| ACGTTGTCATTGTTTCAGAC+AGG | + | chr5.2:7473787-7473806 | None:intergenic | 40.0% | |
| ACTGTTGAGAAGACTAAGGA+AGG | - | chr5.2:7473528-7473547 | MS.gene09589:intron | 40.0% | |
| AGACTTTCTGCAGAACTAGA+GGG | + | chr5.2:7472516-7472535 | None:intergenic | 40.0% | |
| AGCGGTATTAGAACCAACAT+CGG | + | chr5.2:7473346-7473365 | None:intergenic | 40.0% | |
| AGGATGTTGTTATGAGGGAT+AGG | - | chr5.2:7473604-7473623 | MS.gene09589:intron | 40.0% | |
| AGTCTTACGAATCTCTTGTC+TGG | + | chr5.2:7474569-7474588 | None:intergenic | 40.0% | |
| AGTGTTGTCAGCATGGAAAT+TGG | + | chr5.2:7472294-7472313 | None:intergenic | 40.0% | |
| AGTTGGGCATTTGAAAGAGA+GGG | - | chr5.2:7472754-7472773 | MS.gene09589:CDS | 40.0% | |
| ATCACACTTAACGGCATCAT+TGG | - | chr5.2:7473380-7473399 | MS.gene09589:CDS | 40.0% | |
| ATTTCTGTTATGTTTGCGGC+AGG | - | chr5.2:7472821-7472840 | MS.gene09589:CDS | 40.0% | |
| CAAGCTCACAATCTTCCATT+TGG | - | chr5.2:7472589-7472608 | MS.gene09589:CDS | 40.0% | |
| CAGAGACGAGAAGAAAGTAA+CGG | + | chr5.2:7471447-7471466 | None:intergenic | 40.0% | |
| CCACTGATGAAAAGAAAGGT+AGG | - | chr5.2:7474113-7474132 | MS.gene09589:intron | 40.0% | |
| CGAAACGAGTTAAAGTGAAC+TGG | + | chr5.2:7472398-7472417 | None:intergenic | 40.0% | |
| CGAGTTAAAGTGAACTGGTT+TGG | + | chr5.2:7472393-7472412 | None:intergenic | 40.0% | |
| CTAGCAAGGATGTTGTTATG+AGG | - | chr5.2:7473598-7473617 | MS.gene09589:intron | 40.0% | |
| CTTCATGATAGTAGGAAGAG+TGG | - | chr5.2:7472973-7472992 | MS.gene09589:CDS | 40.0% | |
| GAAACAAACGACCTAAACTC+AGG | + | chr5.2:7474448-7474467 | None:intergenic | 40.0% | |
| GAGCTATGGCTAATGATAGT+TGG | - | chr5.2:7474278-7474297 | MS.gene09589:intron | 40.0% | |
| GAGGAGAAAGAATAACCTGA+AGG | + | chr5.2:7471836-7471855 | None:intergenic | 40.0% | |
| GATGCCGTTAAGTGTGATAT+AGG | + | chr5.2:7473378-7473397 | None:intergenic | 40.0% | |
| GATGTTGTTATGAGGGATAG+GGG | - | chr5.2:7473606-7473625 | MS.gene09589:intron | 40.0% | |
| GCAGTCCAACAAATCATAGT+TGG | + | chr5.2:7472345-7472364 | None:intergenic | 40.0% | |
| GCCTCCTATATCACACTTAA+CGG | - | chr5.2:7473371-7473390 | MS.gene09589:CDS | 40.0% | |
| GGAGCACAATCTAACAAAAG+AGG | + | chr5.2:7474364-7474383 | None:intergenic | 40.0% | |
| GGATGTTGTTATGAGGGATA+GGG | - | chr5.2:7473605-7473624 | MS.gene09589:intron | 40.0% | |
| GTATTAGAACCAACATCGGA+CGG | + | chr5.2:7473342-7473361 | None:intergenic | 40.0% | |
| GTGATGCTTTACCAACATGT+AGG | - | chr5.2:7471466-7471485 | MS.gene09589:CDS | 40.0% | |
| GTTGGACACAATTGAGATGT+GGG | - | chr5.2:7472564-7472583 | MS.gene09589:intron | 40.0% | |
| GTTTCAGTTCTTCCATCGTA+AGG | - | chr5.2:7472444-7472463 | MS.gene09589:intron | 40.0% | |
| TAAGTGTGATATAGGAGGCT+GGG | + | chr5.2:7473370-7473389 | None:intergenic | 40.0% | |
| TACTAGTCATAAGGTGCGTA+CGG | - | chr5.2:7471632-7471651 | MS.gene09589:CDS | 40.0% | |
| TCAGACAGGATTATTGCATC+CGG | + | chr5.2:7473773-7473792 | None:intergenic | 40.0% | |
| TCAGCTGCACAAATACTTTC+TGG | + | chr5.2:7473246-7473265 | None:intergenic | 40.0% | |
| TCATCACTAACTGTCGGATT+AGG | + | chr5.2:7473438-7473457 | None:intergenic | 40.0% | |
| TCTCATCAGAAGGATCATTC+TGG | - | chr5.2:7471678-7471697 | MS.gene09589:CDS | 40.0% | |
| TCTCCAAACAAACACCTTGT+TGG | + | chr5.2:7473153-7473172 | None:intergenic | 40.0% | |
| TGGATGGTTATGCTTTCACT+TGG | - | chr5.2:7474209-7474228 | MS.gene09589:intron | 40.0% | |
| TGTCCAACAGAGTAGTTGTT+GGG | + | chr5.2:7472552-7472571 | None:intergenic | 40.0% | |
| TGTTGGACACAATTGAGATG+TGG | - | chr5.2:7472563-7472582 | MS.gene09589:intron | 40.0% | |
| TTAAGTGTGATATAGGAGGC+TGG | + | chr5.2:7473371-7473390 | None:intergenic | 40.0% | |
| TTTATGGTATGCCAGAAGGA+GGG | - | chr5.2:7473999-7474018 | MS.gene09589:CDS | 40.0% | |
| ! | ATTGCTGGATATGGGCTTTT+TGG | - | chr5.2:7472121-7472140 | MS.gene09589:intron | 40.0% |
| ! | CCTACCTTTCTTTTCATCAG+TGG | + | chr5.2:7474116-7474135 | None:intergenic | 40.0% |
| ! | GAATCTCTTGTCTGGTGTTT+TGG | + | chr5.2:7474561-7474580 | None:intergenic | 40.0% |
| ! | GATCCAACAAGGTGTTTGTT+TGG | - | chr5.2:7473147-7473166 | MS.gene09589:CDS | 40.0% |
| ! | GGATTTTATGGTATGCCAGA+AGG | - | chr5.2:7473995-7474014 | MS.gene09589:CDS | 40.0% |
| ! | GGTGTTTGTTTCTCATCAGA+AGG | - | chr5.2:7471668-7471687 | MS.gene09589:CDS | 40.0% |
| ! | GTCTTATATGGTGGAACTGT+CGG | - | chr5.2:7473690-7473709 | MS.gene09589:CDS | 40.0% |
| ! | TAAGACTCATTTTCCTTGGC+GGG | + | chr5.2:7473676-7473695 | None:intergenic | 40.0% |
| ! | TCTGTTGATCGTATTGGTAG+GGG | - | chr5.2:7473857-7473876 | MS.gene09589:CDS | 40.0% |
| ! | TCTTATATGGTGGAACTGTC+GGG | - | chr5.2:7473691-7473710 | MS.gene09589:CDS | 40.0% |
| ! | TGGCAGATTACTGCAAGTTT+TGG | - | chr5.2:7471766-7471785 | MS.gene09589:CDS | 40.0% |
| ! | TTTGTTTCTCAACGATGGCA+AGG | - | chr5.2:7474460-7474479 | MS.gene09589:CDS | 40.0% |
| ! | TTTTATGGTATGCCAGAAGG+AGG | - | chr5.2:7473998-7474017 | MS.gene09589:CDS | 40.0% |
| !! | GAAGTTTTGGTATCGTGATG+GGG | - | chr5.2:7474714-7474733 | MS.gene09589:CDS | 40.0% |
| !! | GATGCATGGTAGGGTATTTT+TGG | - | chr5.2:7471707-7471726 | MS.gene09589:CDS | 40.0% |
| !! | TGATTTGTTGGACTGCTGTT+TGG | - | chr5.2:7472349-7472368 | MS.gene09589:intron | 40.0% |
| !! | TTCTGATGGTGGTCAAGATA+CGG | - | chr5.2:7473575-7473594 | MS.gene09589:intron | 40.0% |
| AAAGCGAAAGCGACATTGAC+CGG | + | chr5.2:7474404-7474423 | None:intergenic | 45.0% | |
| AAGGAACATGATGAGCAAGG+AGG | - | chr5.2:7471504-7471523 | MS.gene09589:CDS | 45.0% | |
| AGGAACATGATGAGCAAGGA+GGG | - | chr5.2:7471505-7471524 | MS.gene09589:CDS | 45.0% | |
| AGGGTAGTGATCAGAAGATG+TGG | + | chr5.2:7474344-7474363 | None:intergenic | 45.0% | |
| ATCATTGGCGCATATGCTGA+AGG | - | chr5.2:7473395-7473414 | MS.gene09589:CDS | 45.0% | |
| ATGTTGAAGAAGGCAAGCGT+TGG | - | chr5.2:7472890-7472909 | MS.gene09589:CDS | 45.0% | |
| CAAAGAGCCAAGAACCAGTA+CGG | + | chr5.2:7472486-7472505 | None:intergenic | 45.0% | |
| CATGATAGTAGGAAGAGTGG+TGG | - | chr5.2:7472976-7472995 | MS.gene09589:CDS | 45.0% | |
| CATTCTGGATCAGTGATGCA+TGG | - | chr5.2:7471693-7471712 | MS.gene09589:CDS | 45.0% | |
| CCAATCATGAGCTGACAGTA+AGG | + | chr5.2:7471951-7471970 | None:intergenic | 45.0% | |
| CCTTACTGTCAGCTCATGAT+TGG | - | chr5.2:7471948-7471967 | MS.gene09589:intron | 45.0% | |
| CGGAATCCTTGAATAAGCCA+CGG | + | chr5.2:7474151-7474170 | None:intergenic | 45.0% | |
| CGTGGCTTATTCAAGGATTC+CGG | - | chr5.2:7474149-7474168 | MS.gene09589:intron | 45.0% | |
| CTCCTACCTTAAGAGCAACA+CGG | + | chr5.2:7472720-7472739 | None:intergenic | 45.0% | |
| CTGACAACACTACTGCCAAT+CGG | - | chr5.2:7472303-7472322 | MS.gene09589:intron | 45.0% | |
| GAGACTTTCTGCAGAACTAG+AGG | + | chr5.2:7472517-7472536 | None:intergenic | 45.0% | |
| GAGGTAAATGACTCGTTGAG+GGG | - | chr5.2:7473956-7473975 | MS.gene09589:CDS | 45.0% | |
| GAGTTGGGCATTTGAAAGAG+AGG | - | chr5.2:7472753-7472772 | MS.gene09589:CDS | 45.0% | |
| GAGTTGTTTAGGTCCTTTGG+AGG | + | chr5.2:7473478-7473497 | None:intergenic | 45.0% | |
| GATTGAGCAAGCTGCATAAC+TGG | + | chr5.2:7473216-7473235 | None:intergenic | 45.0% | |
| GCCGTTAAGTGTGATATAGG+AGG | + | chr5.2:7473375-7473394 | None:intergenic | 45.0% | |
| GGAAATTGGAAGCCATTGTG+AGG | + | chr5.2:7472280-7472299 | None:intergenic | 45.0% | |
| GGACACTGTTGAGAAGACTA+AGG | - | chr5.2:7473524-7473543 | MS.gene09589:intron | 45.0% | |
| GGAGGTAAATGACTCGTTGA+GGG | - | chr5.2:7473955-7473974 | MS.gene09589:CDS | 45.0% | |
| GTGTCCAACAGAGTAGTTGT+TGG | + | chr5.2:7472553-7472572 | None:intergenic | 45.0% | |
| GTTCTGCAGAAAGTCTCCTT+CGG | - | chr5.2:7472520-7472539 | MS.gene09589:intron | 45.0% | |
| GTTCTTCCATCGTAAGGACA+TGG | - | chr5.2:7472450-7472469 | MS.gene09589:intron | 45.0% | |
| TAAGGTAGGAGAACCTCTTG+TGG | - | chr5.2:7472729-7472748 | MS.gene09589:CDS | 45.0% | |
| TACTGTCAGCTCATGATTGG+AGG | - | chr5.2:7471951-7471970 | MS.gene09589:intron | 45.0% | |
| TCAATCATGCTCAGTTTGGC+CGG | - | chr5.2:7473049-7473068 | MS.gene09589:CDS | 45.0% | |
| TCTCAACGATGGCAAGGTTA+TGG | - | chr5.2:7474466-7474485 | MS.gene09589:CDS | 45.0% | |
| TGGAGGTAAATGACTCGTTG+AGG | - | chr5.2:7473954-7473973 | MS.gene09589:CDS | 45.0% | |
| TGGATCAGTGATGCATGGTA+GGG | - | chr5.2:7471698-7471717 | MS.gene09589:CDS | 45.0% | |
| TGTTATGTTTGCGGCAGGTT+GGG | - | chr5.2:7472826-7472845 | MS.gene09589:CDS | 45.0% | |
| TGTTGAAGAAGGCAAGCGTT+GGG | - | chr5.2:7472891-7472910 | MS.gene09589:CDS | 45.0% | |
| TTGCATCCGGTTTATAGGTC+CGG | + | chr5.2:7473760-7473779 | None:intergenic | 45.0% | |
| TTGTGCAGCTGAAAGTGATG+AGG | - | chr5.2:7473254-7473273 | MS.gene09589:CDS | 45.0% | |
| ! | AATAATGTAATGGCGGGACC+TGG | - | chr5.2:7473642-7473661 | MS.gene09589:CDS | 45.0% |
| ! | ATGCAGCTTGCTCAATCTCA+TGG | - | chr5.2:7473219-7473238 | MS.gene09589:CDS | 45.0% |
| ! | CACGATTGGTTCAAGAAGCT+AGG | - | chr5.2:7473286-7473305 | MS.gene09589:CDS | 45.0% |
| ! | CTTATATGGTGGAACTGTCG+GGG | - | chr5.2:7473692-7473711 | MS.gene09589:CDS | 45.0% |
| ! | GAGGTGGTTTGGCATGTTTA+TGG | - | chr5.2:7473879-7473898 | MS.gene09589:CDS | 45.0% |
| ! | GGAGCACTTTCAATTGAGAG+AGG | + | chr5.2:7473321-7473340 | None:intergenic | 45.0% |
| ! | GGAGCAGTGTTACGAGTTTT+TGG | + | chr5.2:7473195-7473214 | None:intergenic | 45.0% |
| ! | GGCTAGTTGAACCTGAGTTT+AGG | - | chr5.2:7474434-7474453 | MS.gene09589:CDS | 45.0% |
| ! | GGCTCTAATGATTCTGATGG+TGG | - | chr5.2:7473564-7473583 | MS.gene09589:intron | 45.0% |
| ! | GGGAGTCTTTTGATCCAACA+AGG | - | chr5.2:7473136-7473155 | MS.gene09589:CDS | 45.0% |
| ! | GGTCGTTTGTTTCTCAACGA+TGG | - | chr5.2:7474455-7474474 | MS.gene09589:CDS | 45.0% |
| ! | TTGTTGGACTGCTGTTTGGT+GGG | - | chr5.2:7472353-7472372 | MS.gene09589:intron | 45.0% |
| ! | TTTGTTGGACTGCTGTTTGG+TGG | - | chr5.2:7472352-7472371 | MS.gene09589:intron | 45.0% |
| !! | GAATCAATGGGCTGTCTTCT+CGG | - | chr5.2:7472622-7472641 | MS.gene09589:CDS | 45.0% |
| !! | TAGAGGTATCCACATGGGAA+CGG | + | chr5.2:7474612-7474631 | None:intergenic | 45.0% |
| !! | TGTTTCTGGAAGCAACCTTC+AGG | - | chr5.2:7471818-7471837 | MS.gene09589:CDS | 45.0% |
| !! | TTGGTGTTACGCTCTCTGTT+TGG | - | chr5.2:7471415-7471434 | MS.gene09589:CDS | 45.0% |
| !!! | CGAGTTTTTGGAACCACTTG+CGG | + | chr5.2:7473183-7473202 | None:intergenic | 45.0% |
| !!! | CGGAGCCTTTTGAGTTGTTT+AGG | + | chr5.2:7473489-7473508 | None:intergenic | 45.0% |
| !!! | GGGCTTTTTGGTTCAACAGA+AGG | - | chr5.2:7472133-7472152 | MS.gene09589:intron | 45.0% |
| AAGCGACATTGACCGGAACT+AGG | + | chr5.2:7474397-7474416 | None:intergenic | 50.0% | |
| AATCCCTCCCAATCTTCACC+CGG | + | chr5.2:7473071-7473090 | None:intergenic | 50.0% | |
| ACAACTCAAAAGGCTCCGCA+TGG | - | chr5.2:7473491-7473510 | MS.gene09589:intron | 50.0% | |
| ACATGATGAGCAAGGAGGGA+TGG | - | chr5.2:7471509-7471528 | MS.gene09589:CDS | 50.0% | |
| AGAACCTCTTGTGGCGAGTT+GGG | - | chr5.2:7472738-7472757 | MS.gene09589:CDS | 50.0% | |
| AGCAATGGTGCGATGCATGA+TGG | - | chr5.2:7473003-7473022 | MS.gene09589:CDS | 50.0% | |
| AGGGGAAGATGGAGGTTAAC+TGG | - | chr5.2:7473974-7473993 | MS.gene09589:CDS | 50.0% | |
| AGTTTGGCCGGGTGAAGATT+GGG | - | chr5.2:7473061-7473080 | MS.gene09589:CDS | 50.0% | |
| ATGACTCGTTGAGGGGAAGA+TGG | - | chr5.2:7473963-7473982 | MS.gene09589:CDS | 50.0% | |
| ATGAGGGATAGGGGACTATG+TGG | - | chr5.2:7473615-7473634 | MS.gene09589:intron | 50.0% | |
| ATTTGCAGGAGCAGACCGAT+TGG | + | chr5.2:7472321-7472340 | None:intergenic | 50.0% | |
| CAATCATGCTCAGTTTGGCC+GGG | - | chr5.2:7473050-7473069 | MS.gene09589:CDS | 50.0% | |
| CAGCATCCAAAACAGCTTGC+CGG | + | chr5.2:7474171-7474190 | None:intergenic | 50.0% | |
| CCTAGTCCGGACCTATAAAC+CGG | - | chr5.2:7473751-7473770 | MS.gene09589:intron | 50.0% | |
| CGACCCAACAACTACTCTGT+TGG | - | chr5.2:7472546-7472565 | MS.gene09589:intron | 50.0% | |
| CGTCAACCGTGGCTTATTCA+AGG | - | chr5.2:7474142-7474161 | MS.gene09589:intron | 50.0% | |
| CTGGATCAGTGATGCATGGT+AGG | - | chr5.2:7471697-7471716 | MS.gene09589:CDS | 50.0% | |
| CTGTTATGTTTGCGGCAGGT+TGG | - | chr5.2:7472825-7472844 | MS.gene09589:CDS | 50.0% | |
| GAATTCAAGGGCAGCAGTAC+CGG | - | chr5.2:7472931-7472950 | MS.gene09589:CDS | 50.0% | |
| GGTGAAGATTGGGAGGGATT+TGG | - | chr5.2:7473071-7473090 | MS.gene09589:CDS | 50.0% | |
| TATTGGTAGGGGAGGTGGTT+TGG | - | chr5.2:7473868-7473887 | MS.gene09589:CDS | 50.0% | |
| TCCTTGCATAGCACGCTTCT+TGG | - | chr5.2:7471746-7471765 | MS.gene09589:CDS | 50.0% | |
| TCGCGCTGTGGAAGAGAAAT+TGG | - | chr5.2:7474252-7474271 | MS.gene09589:intron | 50.0% | |
| TGAAGCTATCCGTTCCCATG+TGG | - | chr5.2:7474600-7474619 | MS.gene09589:CDS | 50.0% | |
| TGAGGAACGCATTGCACGAT+TGG | - | chr5.2:7473272-7473291 | MS.gene09589:CDS | 50.0% | |
| TGAGGGATAGGGGACTATGT+GGG | - | chr5.2:7473616-7473635 | MS.gene09589:CDS | 50.0% | |
| TGGCAGTAGTGTTGTCAGCA+TGG | + | chr5.2:7472301-7472320 | None:intergenic | 50.0% | |
| TGGTCAAGATACGGCTAGCA+AGG | - | chr5.2:7473584-7473603 | MS.gene09589:intron | 50.0% | |
| TGTCCTCGAGTTCTTCCATG+CGG | + | chr5.2:7473509-7473528 | None:intergenic | 50.0% | |
| TTGGCGCATATGCTGAAGGT+TGG | - | chr5.2:7473399-7473418 | MS.gene09589:CDS | 50.0% | |
| ! | AAGAGTGGTGGTGAGAGCAA+TGG | - | chr5.2:7472988-7473007 | MS.gene09589:CDS | 50.0% |
| ! | AGGATTCCGGCAAGCTGTTT+TGG | - | chr5.2:7474162-7474181 | MS.gene09589:intron | 50.0% |
| ! | CCATTGATTGTCAACCCCTC+CGG | + | chr5.2:7472953-7472972 | None:intergenic | 50.0% |
| ! | CTCCGTGTTGCTCTTAAGGT+AGG | - | chr5.2:7472715-7472734 | MS.gene09589:CDS | 50.0% |
| ! | GTTGAAGAAGGCAAGCGTTG+GGG | - | chr5.2:7472892-7472911 | MS.gene09589:CDS | 50.0% |
| ! | GTTGATCGTATTGGTAGGGG+AGG | - | chr5.2:7473860-7473879 | MS.gene09589:CDS | 50.0% |
| ! | TCGGATTAGGCATCCCACTT+AGG | + | chr5.2:7473425-7473444 | None:intergenic | 50.0% |
| !! | ATGCTGAAGGTTGGCCTAAG+TGG | - | chr5.2:7473408-7473427 | MS.gene09589:CDS | 50.0% |
| !! | GCTTTCGCTTTGAGAATGCG+TGG | - | chr5.2:7474413-7474432 | MS.gene09589:CDS | 50.0% |
| !! | GTGTGATCCGTACTGGTTCT+TGG | - | chr5.2:7472476-7472495 | MS.gene09589:intron | 50.0% |
| !! | TGCTGAAGGTTGGCCTAAGT+GGG | - | chr5.2:7473409-7473428 | MS.gene09589:CDS | 50.0% |
| !! | TGGAGAAAGAGTACCGCAAG+TGG | - | chr5.2:7473167-7473186 | MS.gene09589:CDS | 50.0% |
| AAGGTGCGTACGGTCTCATG+TGG | - | chr5.2:7471642-7471661 | MS.gene09589:CDS | 55.0% | |
| AATGCCCAACTCGCCACAAG+AGG | + | chr5.2:7472745-7472764 | None:intergenic | 55.0% | |
| ACTCGTTGAGGGGAAGATGG+AGG | - | chr5.2:7473966-7473985 | MS.gene09589:CDS | 55.0% | |
| AGCAAGGAGGGATGGCAGTT+TGG | - | chr5.2:7471517-7471536 | MS.gene09589:CDS | 55.0% | |
| AGTTGTTGGGTCGTCACCGA+AGG | + | chr5.2:7472539-7472558 | None:intergenic | 55.0% | |
| ATGGAGCGTGTGATCCGTAC+TGG | - | chr5.2:7472469-7472488 | MS.gene09589:intron | 55.0% | |
| ATGGTATGCCAGAAGGAGGG+AGG | - | chr5.2:7474002-7474021 | MS.gene09589:CDS | 55.0% | |
| CAAGGAGGGATGGCAGTTTG+GGG | - | chr5.2:7471519-7471538 | MS.gene09589:CDS | 55.0% | |
| CACGCTCCATGTCCTTACGA+TGG | + | chr5.2:7472459-7472478 | None:intergenic | 55.0% | |
| CAGTTTGGCCGGGTGAAGAT+TGG | - | chr5.2:7473060-7473079 | MS.gene09589:CDS | 55.0% | |
| CATTGACCGGAACTAGGCAC+AGG | + | chr5.2:7474391-7474410 | None:intergenic | 55.0% | |
| CCGGAGGGGTTGACAATCAA+TGG | - | chr5.2:7472950-7472969 | MS.gene09589:CDS | 55.0% | |
| CCGGTTTATAGGTCCGGACT+AGG | + | chr5.2:7473754-7473773 | None:intergenic | 55.0% | |
| GAGAACCTCTTGTGGCGAGT+TGG | - | chr5.2:7472737-7472756 | MS.gene09589:CDS | 55.0% | |
| GAGGGAGGAGAAGAGAGTCT+TGG | - | chr5.2:7474017-7474036 | MS.gene09589:CDS | 55.0% | |
| GCAAGGAGGGATGGCAGTTT+GGG | - | chr5.2:7471518-7471537 | MS.gene09589:CDS | 55.0% | |
| GCATGATGGCATGGGTCTAC+TGG | - | chr5.2:7473017-7473036 | MS.gene09589:CDS | 55.0% | |
| GCGTACGGTCTCATGTGGTA+TGG | - | chr5.2:7471647-7471666 | MS.gene09589:CDS | 55.0% | |
| GGTGCGATGCATGATGGCAT+GGG | - | chr5.2:7473009-7473028 | MS.gene09589:CDS | 55.0% | |
| GTAGGTCTGATCGTCAACCG+TGG | - | chr5.2:7474131-7474150 | MS.gene09589:intron | 55.0% | |
| TCTCTTCTCCTCCCTCCTTC+TGG | + | chr5.2:7474013-7474032 | None:intergenic | 55.0% | |
| TCTTGGAACTGTTCGCGCTG+TGG | - | chr5.2:7474240-7474259 | MS.gene09589:intron | 55.0% | |
| TGATATAGGAGGCTGGGCAG+CGG | + | chr5.2:7473364-7473383 | None:intergenic | 55.0% | |
| TGGTGCGATGCATGATGGCA+TGG | - | chr5.2:7473008-7473027 | MS.gene09589:CDS | 55.0% | |
| TGGTGGAACTGTCGGGGTTT+AGG | - | chr5.2:7473698-7473717 | MS.gene09589:CDS | 55.0% | |
| TGTCTTCTCGGCAGTCACGT+TGG | - | chr5.2:7472634-7472653 | MS.gene09589:CDS | 55.0% | |
| ! | GATCGTATTGGTAGGGGAGG+TGG | - | chr5.2:7473863-7473882 | MS.gene09589:CDS | 55.0% |
| ! | GCCAAGAAGCGTGCTATGCA+AGG | + | chr5.2:7471750-7471769 | None:intergenic | 55.0% |
| ! | GCGTCTCCGTGTTGCTCTTA+AGG | - | chr5.2:7472711-7472730 | MS.gene09589:CDS | 55.0% |
| !! | CGGCAAGCTGTTTTGGATGC+TGG | - | chr5.2:7474169-7474188 | MS.gene09589:intron | 55.0% |
| !! | GAAAGTGCTCCGTCCGATGT+TGG | - | chr5.2:7473330-7473349 | MS.gene09589:CDS | 55.0% |
| CCGCAACCTGTGCCTAGTTC+CGG | - | chr5.2:7474382-7474401 | MS.gene09589:CDS | 60.0% | |
| CCGGAACTAGGCACAGGTTG+CGG | + | chr5.2:7474385-7474404 | None:intergenic | 60.0% | |
| CTTCTCGGCAGTCACGTTGG+TGG | - | chr5.2:7472637-7472656 | MS.gene09589:CDS | 60.0% | |
| GCTCCGCATGGAAGAACTCG+AGG | - | chr5.2:7473503-7473522 | MS.gene09589:intron | 60.0% | |
| GGATGGCAGTTTGGGGAAGC+AGG | - | chr5.2:7471526-7471545 | MS.gene09589:CDS | 60.0% | |
| TGGCAGTTTGGGGAAGCAGG+AGG | - | chr5.2:7471529-7471548 | MS.gene09589:CDS | 60.0% | |
| TGGCCGGGTGAAGATTGGGA+GGG | - | chr5.2:7473065-7473084 | MS.gene09589:CDS | 60.0% | |
| TTGGCCGGGTGAAGATTGGG+AGG | - | chr5.2:7473064-7473083 | MS.gene09589:CDS | 60.0% | |
| ! | TCAAGGGCAGCAGTACCGGA+GGG | - | chr5.2:7472935-7472954 | MS.gene09589:CDS | 60.0% |
| ! | TGGACTGCTGTTTGGTGGGC+AGG | - | chr5.2:7472357-7472376 | MS.gene09589:intron | 60.0% |
| ! | TTCAAGGGCAGCAGTACCGG+AGG | - | chr5.2:7472934-7472953 | MS.gene09589:CDS | 60.0% |
| ! | TTCTGGTGCTTGCTGCCGCA+TGG | + | chr5.2:7474758-7474777 | None:intergenic | 60.0% |
| !! | CTCATTTTCCTTGGCGGGCC+TGG | + | chr5.2:7473671-7473690 | None:intergenic | 60.0% |
| ! | AATGGCGGGACCTGGACACC+AGG | - | chr5.2:7473650-7473669 | MS.gene09589:CDS | 65.0% |
| ! | CAAGGGCAGCAGTACCGGAG+GGG | - | chr5.2:7472936-7472955 | MS.gene09589:CDS | 65.0% |
| CCTGGACACCAGGCCCGCCA+AGG | - | chr5.2:7473660-7473679 | MS.gene09589:CDS | 75.0% | |
| ! | CCTTGGCGGGCCTGGTGTCC+AGG | + | chr5.2:7473663-7473682 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 7471411 | 7474786 | 7471411 | ID=MS.gene09589 |
| chr5.2 | mRNA | 7471411 | 7474786 | 7471411 | ID=MS.gene09589.t1;Parent=MS.gene09589 |
| chr5.2 | exon | 7474358 | 7474786 | 7474358 | ID=MS.gene09589.t1.exon1;Parent=MS.gene09589.t1 |
| chr5.2 | CDS | 7474358 | 7474786 | 7474358 | ID=cds.MS.gene09589.t1;Parent=MS.gene09589.t1 |
| chr5.2 | exon | 7473827 | 7474045 | 7473827 | ID=MS.gene09589.t1.exon2;Parent=MS.gene09589.t1 |
| chr5.2 | CDS | 7473827 | 7474045 | 7473827 | ID=cds.MS.gene09589.t1;Parent=MS.gene09589.t1 |
| chr5.2 | exon | 7473616 | 7473746 | 7473616 | ID=MS.gene09589.t1.exon3;Parent=MS.gene09589.t1 |
| chr5.2 | CDS | 7473616 | 7473746 | 7473616 | ID=cds.MS.gene09589.t1;Parent=MS.gene09589.t1 |
| chr5.2 | exon | 7472589 | 7473495 | 7472589 | ID=MS.gene09589.t1.exon4;Parent=MS.gene09589.t1 |
| chr5.2 | CDS | 7472589 | 7473495 | 7472589 | ID=cds.MS.gene09589.t1;Parent=MS.gene09589.t1 |
| chr5.2 | exon | 7471411 | 7471881 | 7471411 | ID=MS.gene09589.t1.exon5;Parent=MS.gene09589.t1 |
| chr5.2 | CDS | 7471411 | 7471881 | 7471411 | ID=cds.MS.gene09589.t1;Parent=MS.gene09589.t1 |
| Gene Sequence |
| Protein sequence |
