AlfalfaGEDB | MS.gene46353

M. sativa cultivar XinJiangDaYe / MS.gene46353

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46353.t1	XP_024628877.1	40.8	294	63	1	1	183	1	294	4.80E-49	204.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46353.t1	A0A072VHK9	55.5	110	49	0	1	110	1	110	4.9e-27	131.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene46353	MS.gene60390	PPI
MS.gene004417	MS.gene46353	PPI
MS.gene46353	MS.gene039692	PPI
MS.gene04134	MS.gene46353	PPI
MS.gene86849	MS.gene46353	PPI
MS.gene50392	MS.gene46353	PPI
MS.gene072852	MS.gene46353	PPI
MS.gene41393	MS.gene46353	PPI
MS.gene39956	MS.gene46353	PPI
MS.gene017586	MS.gene46353	PPI
MS.gene98756	MS.gene46353	PPI
MS.gene09589	MS.gene46353	PPI
MS.gene46353	MS.gene057934	PPI
MS.gene46353	MS.gene37537	PPI
MS.gene46353	MS.gene024841	PPI
MS.gene46353	MS.gene95960	PPI
MS.gene46353	MS.gene069786	PPI
MS.gene057828	MS.gene46353	PPI
MS.gene46353	MS.gene025158	PPI
MS.gene46353	MS.gene27329	PPI
MS.gene044729	MS.gene46353	PPI
MS.gene66650	MS.gene46353	PPI
MS.gene005120	MS.gene46353	PPI
MS.gene46353	MS.gene016632	PPI
MS.gene060386	MS.gene46353	PPI
MS.gene24070	MS.gene46353	PPI
MS.gene71588	MS.gene46353	PPI
MS.gene04749	MS.gene46353	PPI
MS.gene059736	MS.gene46353	PPI
MS.gene46353	MS.gene043140	PPI
MS.gene027169	MS.gene46353	PPI
MS.gene46353	MS.gene03149	PPI
MS.gene46353	MS.gene41393	PPI
MS.gene81194	MS.gene46353	PPI
MS.gene025675	MS.gene46353	PPI
MS.gene42903	MS.gene46353	PPI
MS.gene81712	MS.gene46353	PPI
MS.gene055683	MS.gene46353	PPI
MS.gene46353	MS.gene29321	PPI
MS.gene026680	MS.gene46353	PPI
MS.gene41643	MS.gene46353	PPI
MS.gene26844	MS.gene46353	PPI
MS.gene021555	MS.gene46353	PPI
MS.gene048747	MS.gene46353	PPI
MS.gene69584	MS.gene46353	PPI
MS.gene019165	MS.gene46353	PPI
MS.gene048706	MS.gene46353	PPI
MS.gene46353	MS.gene24278	PPI
MS.gene46353	MS.gene34618	PPI
MS.gene055546	MS.gene46353	PPI
MS.gene46353	MS.gene59460	PPI
MS.gene46353	MS.gene81194	PPI
MS.gene46353	MS.gene060773	PPI
MS.gene009121	MS.gene46353	PPI
MS.gene94654	MS.gene46353	PPI
MS.gene073573	MS.gene46353	PPI
MS.gene46353	MS.gene038394	PPI
MS.gene031967	MS.gene46353	PPI
MS.gene87845	MS.gene46353	PPI
MS.gene02896	MS.gene46353	PPI
MS.gene063214	MS.gene46353	PPI
MS.gene97410	MS.gene46353	PPI
MS.gene46353	MS.gene24070	PPI
MS.gene83772	MS.gene46353	PPI
MS.gene32415	MS.gene46353	PPI
MS.gene009213	MS.gene46353	PPI
MS.gene060788	MS.gene46353	PPI
MS.gene035626	MS.gene46353	PPI
MS.gene008927	MS.gene46353	PPI
MS.gene46353	MS.gene055546	PPI
MS.gene63762	MS.gene46353	PPI
MS.gene27329	MS.gene46353	PPI
MS.gene71675	MS.gene46353	PPI
MS.gene30208	MS.gene46353	PPI
MS.gene028716	MS.gene46353	PPI
MS.gene69495	MS.gene46353	PPI
MS.gene46353	MS.gene44144	PPI
MS.gene013676	MS.gene46353	PPI
MS.gene55209	MS.gene46353	PPI
MS.gene64178	MS.gene46353	PPI
MS.gene030090	MS.gene46353	PPI
MS.gene95561	MS.gene46353	PPI
MS.gene96174	MS.gene46353	PPI
MS.gene46353	MS.gene068629	PPI
MS.gene018196	MS.gene46353	PPI
MS.gene065627	MS.gene46353	PPI
MS.gene46353	MS.gene009781	PPI
MS.gene57019	MS.gene46353	PPI
MS.gene65546	MS.gene46353	PPI
MS.gene032299	MS.gene46353	PPI
MS.gene46353	MS.gene21066	PPI
MS.gene03936	MS.gene46353	PPI
MS.gene021968	MS.gene46353	PPI
MS.gene46353	MS.gene98127	PPI
MS.gene46353	MS.gene003264	PPI
MS.gene60059	MS.gene46353	PPI
MS.gene062511	MS.gene46353	PPI
MS.gene43393	MS.gene46353	PPI
MS.gene34197	MS.gene46353	PPI
MS.gene055560	MS.gene46353	PPI
MS.gene008275	MS.gene46353	PPI
MS.gene34618	MS.gene46353	PPI
MS.gene46353	MS.gene49057	PPI
MS.gene038757	MS.gene46353	PPI
MS.gene064966	MS.gene46353	PPI
MS.gene016632	MS.gene46353	PPI
MS.gene46353	MS.gene018474	PPI
MS.gene46353	MS.gene048088	PPI
MS.gene46353	MS.gene86868	PPI
MS.gene048072	MS.gene46353	PPI
MS.gene002590	MS.gene46353	PPI
MS.gene46353	MS.gene96163	PPI
MS.gene05436	MS.gene46353	PPI
MS.gene43924	MS.gene46353	PPI
MS.gene70932	MS.gene46353	PPI
MS.gene047954	MS.gene46353	PPI
MS.gene35175	MS.gene46353	PPI
MS.gene036423	MS.gene46353	PPI
MS.gene069786	MS.gene46353	PPI
MS.gene054652	MS.gene46353	PPI
MS.gene46353	MS.gene012889	PPI
MS.gene021965	MS.gene46353	PPI
MS.gene042614	MS.gene46353	PPI
MS.gene013890	MS.gene46353	PPI
MS.gene060773	MS.gene46353	PPI
MS.gene021647	MS.gene46353	PPI
MS.gene66651	MS.gene46353	PPI
MS.gene96109	MS.gene46353	PPI
MS.gene46353	MS.gene61499	PPI
MS.gene35202	MS.gene46353	PPI
MS.gene051449	MS.gene46353	PPI
MS.gene024841	MS.gene46353	PPI
MS.gene48477	MS.gene46353	PPI
MS.gene51804	MS.gene46353	PPI
MS.gene045875	MS.gene46353	PPI
MS.gene36069	MS.gene46353	PPI
MS.gene038394	MS.gene46353	PPI
MS.gene30136	MS.gene46353	PPI
MS.gene95960	MS.gene46353	PPI
MS.gene008861	MS.gene46353	PPI
MS.gene61452	MS.gene46353	PPI
MS.gene73261	MS.gene46353	PPI
MS.gene024297	MS.gene46353	PPI
MS.gene016102	MS.gene46353	PPI
MS.gene46941	MS.gene46353	PPI
MS.gene045614	MS.gene46353	PPI
MS.gene96541	MS.gene46353	PPI
MS.gene049561	MS.gene46353	PPI
MS.gene000634	MS.gene46353	PPI
MS.gene009781	MS.gene46353	PPI
MS.gene85295	MS.gene46353	PPI
MS.gene47792	MS.gene46353	PPI
MS.gene46948	MS.gene46353	PPI
MS.gene025873	MS.gene46353	PPI
MS.gene012019	MS.gene46353	PPI
MS.gene06164	MS.gene46353	PPI
MS.gene025401	MS.gene46353	PPI
MS.gene46353	MS.gene022929	PPI
MS.gene05358	MS.gene46353	PPI
MS.gene46353	MS.gene007022	PPI
MS.gene074257	MS.gene46353	PPI
MS.gene010890	MS.gene46353	PPI
MS.gene018745	MS.gene46353	PPI
MS.gene000629	MS.gene46353	PPI
MS.gene46353	MS.gene048342	PPI
MS.gene09023	MS.gene46353	PPI
MS.gene059269	MS.gene46353	PPI
MS.gene041264	MS.gene46353	PPI
MS.gene46353	MS.gene069624	PPI
MS.gene41979	MS.gene46353	PPI
MS.gene000506	MS.gene46353	PPI
MS.gene024522	MS.gene46353	PPI
MS.gene05319	MS.gene46353	PPI
MS.gene038098	MS.gene46353	PPI
MS.gene56991	MS.gene46353	PPI
MS.gene85538	MS.gene46353	PPI
MS.gene22111	MS.gene46353	PPI
MS.gene055223	MS.gene46353	PPI
MS.gene46353	MS.gene88393	PPI
MS.gene28545	MS.gene46353	PPI
MS.gene28718	MS.gene46353	PPI
MS.gene46353	MS.gene008658	PPI
MS.gene29321	MS.gene46353	PPI
MS.gene061850	MS.gene46353	PPI
MS.gene003264	MS.gene46353	PPI
MS.gene073582	MS.gene46353	PPI
MS.gene058889	MS.gene46353	PPI
MS.gene98616	MS.gene46353	PPI
MS.gene40828	MS.gene46353	PPI
MS.gene046089	MS.gene46353	PPI
MS.gene77990	MS.gene46353	PPI
MS.gene69586	MS.gene46353	PPI
MS.gene69490	MS.gene46353	PPI
MS.gene46353	MS.gene000640	PPI
MS.gene013644	MS.gene46353	PPI
MS.gene46353	MS.gene98756	PPI
MS.gene80362	MS.gene46353	PPI
MS.gene72520	MS.gene46353	PPI
MS.gene013193	MS.gene46353	PPI
MS.gene08106	MS.gene46353	PPI
MS.gene46353	MS.gene74639	PPI
MS.gene46353	MS.gene071133	PPI
MS.gene46353	MS.gene60266	PPI
MS.gene46353	MS.gene54051	PPI
MS.gene019001	MS.gene46353	PPI
MS.gene63743	MS.gene46353	PPI
MS.gene46353	MS.gene37955	PPI
MS.gene63150	MS.gene46353	PPI
MS.gene46353	MS.gene92517	PPI
MS.gene54051	MS.gene46353	PPI
MS.gene46353	MS.gene010890	PPI
MS.gene46353	MS.gene84790	PPI
MS.gene98127	MS.gene46353	PPI
MS.gene024405	MS.gene46353	PPI
MS.gene012748	MS.gene46353	PPI
MS.gene83979	MS.gene46353	PPI
MS.gene062067	MS.gene46353	PPI
MS.gene45083	MS.gene46353	PPI
MS.gene92517	MS.gene46353	PPI
MS.gene057934	MS.gene46353	PPI
MS.gene57044	MS.gene46353	PPI
MS.gene46353	MS.gene060788	PPI
MS.gene054508	MS.gene46353	PPI
MS.gene89815	MS.gene46353	PPI
MS.gene98471	MS.gene46353	PPI
MS.gene46353	MS.gene77990	PPI
MS.gene028714	MS.gene46353	PPI
MS.gene049610	MS.gene46353	PPI
MS.gene46353	MS.gene062511	PPI
MS.gene038676	MS.gene46353	PPI
MS.gene060718	MS.gene46353	PPI
MS.gene46353	MS.gene027994	PPI
MS.gene71637	MS.gene46353	PPI
MS.gene042651	MS.gene46353	PPI
MS.gene93396	MS.gene46353	PPI
MS.gene05576	MS.gene46353	PPI
MS.gene46353	MS.gene69584	PPI
MS.gene52349	MS.gene46353	PPI
MS.gene05231	MS.gene46353	PPI
MS.gene98467	MS.gene46353	PPI
MS.gene010656	MS.gene46353	PPI
MS.gene42010	MS.gene46353	PPI
MS.gene037049	MS.gene46353	PPI
MS.gene034643	MS.gene46353	PPI
MS.gene40469	MS.gene46353	PPI
MS.gene037634	MS.gene46353	PPI
MS.gene46353	MS.gene61651	PPI
MS.gene64130	MS.gene46353	PPI
MS.gene050679	MS.gene46353	PPI
MS.gene20246	MS.gene46353	PPI
MS.gene46353	MS.gene09023	PPI
MS.gene016719	MS.gene46353	PPI
MS.gene46353	MS.gene054508	PPI
MS.gene46353	MS.gene025987	PPI
MS.gene010290	MS.gene46353	PPI
MS.gene071784	MS.gene46353	PPI
MS.gene053747	MS.gene46353	PPI
MS.gene061579	MS.gene46353	PPI
MS.gene039692	MS.gene46353	PPI
MS.gene76420	MS.gene46353	PPI
MS.gene071320	MS.gene46353	PPI
MS.gene65471	MS.gene46353	PPI
MS.gene26433	MS.gene46353	PPI
MS.gene34463	MS.gene46353	PPI
MS.gene048088	MS.gene46353	PPI
MS.gene46353	MS.gene65474	PPI
MS.gene46353	MS.gene025401	PPI
MS.gene22730	MS.gene46353	PPI
MS.gene46353	MS.gene015093	PPI
MS.gene042559	MS.gene46353	PPI
MS.gene22200	MS.gene46353	PPI
MS.gene46353	MS.gene000379	PPI
MS.gene46353	MS.gene032299	PPI
MS.gene53904	MS.gene46353	PPI
MS.gene26038	MS.gene46353	PPI
MS.gene08708	MS.gene46353	PPI
MS.gene042027	MS.gene46353	PPI
MS.gene85308	MS.gene46353	PPI
MS.gene46353	MS.gene08606	PPI
MS.gene49057	MS.gene46353	PPI
MS.gene015248	MS.gene46353	PPI
MS.gene46353	MS.gene08713	PPI
MS.gene012889	MS.gene46353	PPI
MS.gene053373	MS.gene46353	PPI
MS.gene46353	MS.gene09517	PPI
MS.gene34812	MS.gene46353	PPI
MS.gene44083	MS.gene46353	PPI
MS.gene55682	MS.gene46353	PPI
MS.gene04970	MS.gene46353	PPI
MS.gene51799	MS.gene46353	PPI
MS.gene58419	MS.gene46353	PPI
MS.gene46353	MS.gene62249	PPI
MS.gene067340	MS.gene46353	PPI
MS.gene96163	MS.gene46353	PPI
MS.gene65623	MS.gene46353	PPI
MS.gene08713	MS.gene46353	PPI
MS.gene23521	MS.gene46353	PPI
MS.gene019177	MS.gene46353	PPI
MS.gene049512	MS.gene46353	PPI
MS.gene29406	MS.gene46353	PPI
MS.gene038623	MS.gene46353	PPI
MS.gene86275	MS.gene46353	PPI
MS.gene46353	MS.gene044729	PPI
MS.gene05357	MS.gene46353	PPI
MS.gene032311	MS.gene46353	PPI
MS.gene87529	MS.gene46353	PPI

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46353.t1	MTR_1g036720	55.455	110	49	1	110	1	110	7.54e-39	130
MS.gene46353.t1	MTR_0010s0370	50.000	110	55	1	110	1	110	3.66e-32	115
MS.gene46353.t1	MTR_0010s0350	50.000	110	55	1	110	1	110	3.66e-32	115
MS.gene46353.t1	MTR_2g061500	27.885	104	75	9	112	11	114	4.64e-12	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 64 sgRNAs with CRISPR-Local

Find 124 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCAAGGTCCTTTCTTCAATA+TGG	0.259804	8.4:+24333563	None:intergenic
GTCGTTCAACAACGCAATTC+CGG	0.281101	8.4:-24333111	MS.gene46353:CDS
GTCACCTAATGTAACCGTTT+TGG	0.289220	8.4:+24332951	None:intergenic
TAACCATCTTGAACCTTTGC+CGG	0.323890	8.4:+24333092	None:intergenic
CTTCCTCATCACTCAGATAT+AGG	0.346648	8.4:+24333799	None:intergenic
TTCTGATGAACCTTAACTAA+TGG	0.354381	8.4:+24333042	None:intergenic
AGATGAATTGGATGACTCTT+TGG	0.362459	8.4:+24332717	None:intergenic
CTAGGAGAATGTCGAGAATC+AGG	0.386131	8.4:+24333523	None:intergenic
GCTCCCAAAACGGTTACATT+AGG	0.387253	8.4:-24332955	MS.gene46353:intron
CAGAAAGTCGACACAAGTTC+CGG	0.388018	8.4:-24333024	MS.gene46353:CDS
AATTTGAATGTGAAGAGGTT+TGG	0.404612	8.4:+24333609	None:intergenic
CACTGATACGAGCGCAAGTC+TGG	0.408042	8.4:-24333736	MS.gene46353:CDS
TGAATGGGAATTTAATGTCT+TGG	0.410463	8.4:+24332981	None:intergenic
TGGCGTGATTAGTGACTTCA+TGG	0.415057	8.4:+24332750	None:intergenic
GCAAAGGTTCAAGATGGTTA+AGG	0.415876	8.4:-24333089	MS.gene46353:CDS
CTCGTATCAGTGGAGGAATT+AGG	0.418541	8.4:+24333747	None:intergenic
TGGGGAAGATGGAGATGAAT+TGG	0.421378	8.4:+24332705	None:intergenic
CCCTCACAGGTTTATCTGTA+AGG	0.431593	8.4:+24333703	None:intergenic
TGTTGAACGACTCTTAGTTC+AGG	0.444781	8.4:+24333123	None:intergenic
CACGTTGTGAAGTCTCCATT+GGG	0.445254	8.4:+24332686	None:intergenic
TGATGATGGAGTTCGCCATT+GGG	0.453160	8.4:-24333148	MS.gene46353:CDS
CTGGTCATCGCCATTAGTTA+AGG	0.454362	8.4:-24333052	MS.gene46353:CDS
TGGTATGCATATCACGGTAA+TGG	0.460476	8.4:+24333583	None:intergenic
CAAAGGTTCAAGATGGTTAA+GGG	0.462843	8.4:-24333088	MS.gene46353:CDS
CTGATGATGGAGTTCGCCAT+TGG	0.479009	8.4:-24333149	MS.gene46353:CDS
CCATTCAATTGCTCCCAAAA+CGG	0.488342	8.4:-24332965	MS.gene46353:CDS
TTATATGATGACATCGATCA+TGG	0.493156	8.4:-24333679	MS.gene46353:CDS
CAACAACGCAATTCCGGCAA+AGG	0.504305	8.4:-24333105	MS.gene46353:CDS
TATTCTGTTGAAGCTGATGA+TGG	0.507119	8.4:-24333162	MS.gene46353:intron
GAAGTCTCCATTGGGGAAGA+TGG	0.510272	8.4:+24332694	None:intergenic
TCACGTTGTGAAGTCTCCAT+TGG	0.510906	8.4:+24332685	None:intergenic
TAAGGGAGGACGACCAAGAC+TGG	0.510947	8.4:-24333071	MS.gene46353:CDS
ATTGGATGACTCTTTGGAAG+AGG	0.519737	8.4:+24332723	None:intergenic
CTAATGGCGATGACCAGTCT+TGG	0.531250	8.4:+24333058	None:intergenic
TTGATGTTTACTCCTCTACC+CGG	0.533090	8.4:+24333642	None:intergenic
ATGCATACCATATTGAAGAA+AGG	0.538581	8.4:-24333570	MS.gene46353:CDS
CCTTACAGATAAACCTGTGA+GGG	0.539149	8.4:-24333703	MS.gene46353:CDS
TTGGATGACTCTTTGGAAGA+GGG	0.540084	8.4:+24332724	None:intergenic
AAATAAGCGGAATACTCTGT+GGG	0.546821	8.4:+24333490	None:intergenic
GACTCTTTGGAAGAGGGAGA+TGG	0.567286	8.4:+24332730	None:intergenic
TGATCTTGAGATTGCAATCG+AGG	0.576230	8.4:-24333775	MS.gene46353:CDS
TTCATCTCCATCTTCCCCAA+TGG	0.578605	8.4:-24332701	MS.gene46353:CDS
CAGACTTGCGCTCGTATCAG+TGG	0.578627	8.4:+24333737	None:intergenic
ATTCCGGCAAAGGTTCAAGA+TGG	0.587810	8.4:-24333095	MS.gene46353:CDS
GTCATCATATAACCCCTCAC+AGG	0.597421	8.4:+24333690	None:intergenic
GATACGAGCGCAAGTCTGGT+AGG	0.607548	8.4:-24333732	MS.gene46353:CDS
TCAATATGGTATGCATATCA+CGG	0.610783	8.4:+24333577	None:intergenic
TGATGTTTACTCCTCTACCC+GGG	0.623585	8.4:+24333643	None:intergenic
CCATATTGAAGAAAGGACCT+TGG	0.624271	8.4:-24333563	MS.gene46353:CDS
CTCTTAGTTCAGGACCCCAA+TGG	0.632289	8.4:+24333133	None:intergenic
AAACCTATATCTGAGTGATG+AGG	0.653560	8.4:-24333802	MS.gene46353:CDS
GATGATGGAGTTCGCCATTG+GGG	0.654076	8.4:-24333147	MS.gene46353:CDS
GGCGTGATTAGTGACTTCAT+GGG	0.670009	8.4:+24332751	None:intergenic
ACTTGCGCTCGTATCAGTGG+AGG	0.676334	8.4:+24333740	None:intergenic
CTTACAGATAAACCTGTGAG+GGG	0.677752	8.4:-24333702	MS.gene46353:CDS
ATAAGCGGAATACTCTGTGG+GGG	0.681952	8.4:+24333492	None:intergenic
GTGATTAGTGACTTCATGGG+AGG	0.692700	8.4:+24332754	None:intergenic
AATAAGCGGAATACTCTGTG+GGG	0.694439	8.4:+24333491	None:intergenic
TCCTTACAGATAAACCTGTG+AGG	0.699081	8.4:-24333704	MS.gene46353:CDS
AAAGTCGACACAAGTTCCGG+CGG	0.699174	8.4:-24333021	MS.gene46353:CDS
AGGTTCAAGATGGTTAAGGG+AGG	0.708166	8.4:-24333085	MS.gene46353:CDS
GGAGAATGTCGAGAATCAGG+AGG	0.721813	8.4:+24333526	None:intergenic
AGGTTATTATCAAAATACCA+AGG	0.728541	8.4:+24333546	None:intergenic
ACGTTGTGAAGTCTCCATTG+GGG	0.730208	8.4:+24332687	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTTCTACAAACTTGAAA+CGG	-	chr8.4:24333673-24333692	MS.gene46353:CDS	20.0%
!	AGGTTATTATCAAAATACCA+AGG	+	chr8.4:24332958-24332977	None:intergenic	25.0%
!!	ATTTTCTTCTGTCTTTTAAG+AGG	+	chr8.4:24333207-24333226	None:intergenic	25.0%
!!	TAACTTTATAGGAGACTTTT+TGG	-	chr8.4:24333107-24333126	MS.gene46353:CDS	25.0%
	AATTTGAATGTGAAGAGGTT+TGG	+	chr8.4:24332895-24332914	None:intergenic	30.0%
	ATGCATACCATATTGAAGAA+AGG	-	chr8.4:24332931-24332950	MS.gene46353:intron	30.0%
	GAATTTCTGATATACCAGTA+GGG	-	chr8.4:24333052-24333071	MS.gene46353:CDS	30.0%
	GGAAAAATTTGAATGTGAAG+AGG	+	chr8.4:24332900-24332919	None:intergenic	30.0%
	TAAGAGGTTTAGTAACATCT+AGG	+	chr8.4:24333191-24333210	None:intergenic	30.0%
	TCAATATGGTATGCATATCA+CGG	+	chr8.4:24332927-24332946	None:intergenic	30.0%
	TGAATGGGAATTTAATGTCT+TGG	+	chr8.4:24333523-24333542	None:intergenic	30.0%
	TTATATGATGACATCGATCA+TGG	-	chr8.4:24332822-24332841	MS.gene46353:intron	30.0%
	TTCTGATGAACCTTAACTAA+TGG	+	chr8.4:24333462-24333481	None:intergenic	30.0%
!	CATCGATCATGGAAAAATTT+TGG	-	chr8.4:24332833-24332852	MS.gene46353:intron	30.0%
!	GGGAATTTTTGTTACTATTG+CGG	-	chr8.4:24333279-24333298	MS.gene46353:intron	30.0%
	AAAATTCCCCAATCGTTCAT+AGG	+	chr8.4:24333268-24333287	None:intergenic	35.0%
	AAACCTATATCTGAGTGATG+AGG	-	chr8.4:24332699-24332718	MS.gene46353:CDS	35.0%
	AAATAAGCGGAATACTCTGT+GGG	+	chr8.4:24333014-24333033	None:intergenic	35.0%
	AAGGATCTCGGTAACTTTAT+AGG	-	chr8.4:24333096-24333115	MS.gene46353:CDS	35.0%
	ACAGAAGAAAATTAAGCGTC+CGG	-	chr8.4:24333215-24333234	MS.gene46353:intron	35.0%
	ACAGTTGGGCGAATTAAATT+GGG	+	chr8.4:24333588-24333607	None:intergenic	35.0%
	AGATGAATTGGATGACTCTT+TGG	+	chr8.4:24333787-24333806	None:intergenic	35.0%
	ATTACCATTCAGATCATTCC+TGG	+	chr8.4:24333700-24333719	None:intergenic	35.0%
	CAAAGGTTCAAGATGGTTAA+GGG	-	chr8.4:24333413-24333432	MS.gene46353:intron	35.0%
	CAGAATGGAACTGAAATAAG+CGG	+	chr8.4:24333027-24333046	None:intergenic	35.0%
	CGAATTTCTGATATACCAGT+AGG	-	chr8.4:24333051-24333070	MS.gene46353:CDS	35.0%
	GCTTATTTCAGTTCCATTCT+GGG	-	chr8.4:24333026-24333045	MS.gene46353:CDS	35.0%
	TATTCTGTTGAAGCTGATGA+TGG	-	chr8.4:24333339-24333358	MS.gene46353:intron	35.0%
	TGATATACCAGTAGGGTTTA+TGG	-	chr8.4:24333059-24333078	MS.gene46353:CDS	35.0%
	TGTGTTTATTGCTCACAGTT+GGG	+	chr8.4:24333602-24333621	None:intergenic	35.0%
!	TCACCTAATGTAACCGTTTT+GGG	+	chr8.4:24333552-24333571	None:intergenic	35.0%
	AATAAGCGGAATACTCTGTG+GGG	+	chr8.4:24333013-24333032	None:intergenic	40.0%
	AGGGTTTATGGCAGAAAAAG+TGG	-	chr8.4:24333071-24333090	MS.gene46353:CDS	40.0%
	CACAGTTGGGCGAATTAAAT+TGG	+	chr8.4:24333589-24333608	None:intergenic	40.0%
	CAGAAGAAAATTAAGCGTCC+GGG	-	chr8.4:24333216-24333235	MS.gene46353:intron	40.0%
	CATGAAAGTTGAAGCATGAG+GGG	+	chr8.4:24333634-24333653	None:intergenic	40.0%
	CCAAGGTCCTTTCTTCAATA+TGG	+	chr8.4:24332941-24332960	None:intergenic	40.0%
	CCATATTGAAGAAAGGACCT+TGG	-	chr8.4:24332938-24332957	MS.gene46353:intron	40.0%
	CCATGAAAGTTGAAGCATGA+GGG	+	chr8.4:24333635-24333654	None:intergenic	40.0%
	CCATTCAATTGCTCCCAAAA+CGG	-	chr8.4:24333536-24333555	MS.gene46353:CDS	40.0%
	CCTTACAGATAAACCTGTGA+GGG	-	chr8.4:24332798-24332817	MS.gene46353:intron	40.0%
	CGCTTATTTCAGTTCCATTC+TGG	-	chr8.4:24333025-24333044	MS.gene46353:CDS	40.0%
	CTTACAGATAAACCTGTGAG+GGG	-	chr8.4:24332799-24332818	MS.gene46353:intron	40.0%
	CTTCCTCATCACTCAGATAT+AGG	+	chr8.4:24332705-24332724	None:intergenic	40.0%
	GAAATAAGCGGAATACTCTG+TGG	+	chr8.4:24333015-24333034	None:intergenic	40.0%
	GCAAAGGTTCAAGATGGTTA+AGG	-	chr8.4:24333412-24333431	MS.gene46353:intron	40.0%
	GGGTTTATGGCAGAAAAAGT+GGG	-	chr8.4:24333072-24333091	MS.gene46353:CDS	40.0%
	GGTTTATGGCAGAAAAAGTG+GGG	-	chr8.4:24333073-24333092	MS.gene46353:CDS	40.0%
	GTGTGTTTATTGCTCACAGT+TGG	+	chr8.4:24333603-24333622	None:intergenic	40.0%
	TAACCATCTTGAACCTTTGC+CGG	+	chr8.4:24333412-24333431	None:intergenic	40.0%
	TCAGAAATTCGAACCCAGAA+TGG	+	chr8.4:24333042-24333061	None:intergenic	40.0%
	TCCATGAAAGTTGAAGCATG+AGG	+	chr8.4:24333636-24333655	None:intergenic	40.0%
	TCCTTACAGATAAACCTGTG+AGG	-	chr8.4:24332797-24332816	MS.gene46353:intron	40.0%
	TGATCTTGAGATTGCAATCG+AGG	-	chr8.4:24332726-24332745	MS.gene46353:CDS	40.0%
	TGGTATGCATATCACGGTAA+TGG	+	chr8.4:24332921-24332940	None:intergenic	40.0%
	TGTTGAACGACTCTTAGTTC+AGG	+	chr8.4:24333381-24333400	None:intergenic	40.0%
	TTGATGTTTACTCCTCTACC+CGG	+	chr8.4:24332862-24332881	None:intergenic	40.0%
	TTGTTACTATTGCGGCTTGT+TGG	-	chr8.4:24333287-24333306	MS.gene46353:intron	40.0%
!	ATTGGATGACTCTTTGGAAG+AGG	+	chr8.4:24333781-24333800	None:intergenic	40.0%
!	GTCACCTAATGTAACCGTTT+TGG	+	chr8.4:24333553-24333572	None:intergenic	40.0%
!	TGTTACTATTGCGGCTTGTT+GGG	-	chr8.4:24333288-24333307	MS.gene46353:intron	40.0%
!	TTGGATGACTCTTTGGAAGA+GGG	+	chr8.4:24333780-24333799	None:intergenic	40.0%
!	TTTTCTGCCATAAACCCTAC+TGG	+	chr8.4:24333069-24333088	None:intergenic	40.0%
!!	ATGGAAAAATTTTGGCACCC+GGG	-	chr8.4:24332841-24332860	MS.gene46353:intron	40.0%
!!	CATGGAAAAATTTTGGCACC+CGG	-	chr8.4:24332840-24332859	MS.gene46353:intron	40.0%
!!!	CGTTTTGGGAGCAATTGAAT+GGG	+	chr8.4:24333538-24333557	None:intergenic	40.0%
	AAGAAAATTAAGCGTCCGGG+AGG	-	chr8.4:24333219-24333238	MS.gene46353:intron	45.0%
	ACGTTGTGAAGTCTCCATTG+GGG	+	chr8.4:24333817-24333836	None:intergenic	45.0%
	AGAAAATTAAGCGTCCGGGA+GGG	-	chr8.4:24333220-24333239	MS.gene46353:intron	45.0%
	AGGTTCAAGATGGTTAAGGG+AGG	-	chr8.4:24333416-24333435	MS.gene46353:intron	45.0%
	ATAAGCGGAATACTCTGTGG+GGG	+	chr8.4:24333012-24333031	None:intergenic	45.0%
	ATTCCGGCAAAGGTTCAAGA+TGG	-	chr8.4:24333406-24333425	MS.gene46353:intron	45.0%
	CACGTTGTGAAGTCTCCATT+GGG	+	chr8.4:24333818-24333837	None:intergenic	45.0%
	CAGAAAGTCGACACAAGTTC+CGG	-	chr8.4:24333477-24333496	MS.gene46353:intron	45.0%
	CATGTATGACCTGAGGTGAT+TGG	+	chr8.4:24333154-24333173	None:intergenic	45.0%
	CCCTCACAGGTTTATCTGTA+AGG	+	chr8.4:24332801-24332820	None:intergenic	45.0%
	CCCTCATGCTTCAACTTTCA+TGG	-	chr8.4:24333632-24333651	MS.gene46353:CDS	45.0%
	CGCTTCACCTATGAACGATT+GGG	-	chr8.4:24333258-24333277	MS.gene46353:intron	45.0%
	CTACAAACTTGAAACGGTCC+AGG	-	chr8.4:24333679-24333698	MS.gene46353:CDS	45.0%
	CTAGGAGAATGTCGAGAATC+AGG	+	chr8.4:24332981-24333000	None:intergenic	45.0%
	CTCGTATCAGTGGAGGAATT+AGG	+	chr8.4:24332757-24332776	None:intergenic	45.0%
	CTGGTCATCGCCATTAGTTA+AGG	-	chr8.4:24333449-24333468	MS.gene46353:intron	45.0%
	GAAAAAGTGGGGAAGGATCT+CGG	-	chr8.4:24333084-24333103	MS.gene46353:CDS	45.0%
	GCTCCCAAAACGGTTACATT+AGG	-	chr8.4:24333546-24333565	MS.gene46353:CDS	45.0%
	GCTTCACCTATGAACGATTG+GGG	-	chr8.4:24333259-24333278	MS.gene46353:intron	45.0%
	GGCGTGATTAGTGACTTCAT+GGG	+	chr8.4:24333753-24333772	None:intergenic	45.0%
	GTCATCATATAACCCCTCAC+AGG	+	chr8.4:24332814-24332833	None:intergenic	45.0%
	GTCGTTCAACAACGCAATTC+CGG	-	chr8.4:24333390-24333409	MS.gene46353:intron	45.0%
	GTGATTAGTGACTTCATGGG+AGG	+	chr8.4:24333750-24333769	None:intergenic	45.0%
	TATGGCAGAAAAAGTGGGGA+AGG	-	chr8.4:24333077-24333096	MS.gene46353:CDS	45.0%
	TCACGTTGTGAAGTCTCCAT+TGG	+	chr8.4:24333819-24333838	None:intergenic	45.0%
	TCGCTTCACCTATGAACGAT+TGG	-	chr8.4:24333257-24333276	MS.gene46353:intron	45.0%
	TGATCTGCATGTATGACCTG+AGG	+	chr8.4:24333161-24333180	None:intergenic	45.0%
	TGATGTTTACTCCTCTACCC+GGG	+	chr8.4:24332861-24332880	None:intergenic	45.0%
	TGGCGTGATTAGTGACTTCA+TGG	+	chr8.4:24333754-24333773	None:intergenic	45.0%
	TGGGGAAGATGGAGATGAAT+TGG	+	chr8.4:24333799-24333818	None:intergenic	45.0%
	TTCATCTCCATCTTCCCCAA+TGG	-	chr8.4:24333800-24333819	MS.gene46353:CDS	45.0%
!	GTTACTGTTTTCGATTCCGC+CGG	+	chr8.4:24333499-24333518	None:intergenic	45.0%
!!	GTTACTATTGCGGCTTGTTG+GGG	-	chr8.4:24333289-24333308	MS.gene46353:intron	45.0%
!!	TCATCTTGCTGACTCATCTC+AGG	-	chr8.4:24333722-24333741	MS.gene46353:CDS	45.0%
!!	TGATGATGGAGTTCGCCATT+GGG	-	chr8.4:24333353-24333372	MS.gene46353:intron	45.0%
!!!	CCGTTTTGGGAGCAATTGAA+TGG	+	chr8.4:24333539-24333558	None:intergenic	45.0%
	AAAGTCGACACAAGTTCCGG+CGG	-	chr8.4:24333480-24333499	MS.gene46353:intron	50.0%
	ACTGTATGTGATTCCCCTCC+CGG	+	chr8.4:24333237-24333256	None:intergenic	50.0%
	AGAACAGTGCCAATCACCTC+AGG	-	chr8.4:24333142-24333161	MS.gene46353:CDS	50.0%
	CAACAACGCAATTCCGGCAA+AGG	-	chr8.4:24333396-24333415	MS.gene46353:intron	50.0%
	CGGTCCAGGAATGATCTGAA+TGG	-	chr8.4:24333693-24333712	MS.gene46353:CDS	50.0%
	CTAATGGCGATGACCAGTCT+TGG	+	chr8.4:24333446-24333465	None:intergenic	50.0%
	CTCTTAGTTCAGGACCCCAA+TGG	+	chr8.4:24333371-24333390	None:intergenic	50.0%
	GAAAATTAAGCGTCCGGGAG+GGG	-	chr8.4:24333221-24333240	MS.gene46353:intron	50.0%
	GAAGTCTCCATTGGGGAAGA+TGG	+	chr8.4:24333810-24333829	None:intergenic	50.0%
	GAGGTGATTGGCACTGTTCT+TGG	+	chr8.4:24333142-24333161	None:intergenic	50.0%
	GGAGAATGTCGAGAATCAGG+AGG	+	chr8.4:24332978-24332997	None:intergenic	50.0%
!	GACTCTTTGGAAGAGGGAGA+TGG	+	chr8.4:24333774-24333793	None:intergenic	50.0%
!!	AAATTTTGGCACCCGGGTAG+AGG	-	chr8.4:24332847-24332866	MS.gene46353:intron	50.0%
!!	CTGATGATGGAGTTCGCCAT+TGG	-	chr8.4:24333352-24333371	MS.gene46353:intron	50.0%
!!	GATGATGGAGTTCGCCATTG+GGG	-	chr8.4:24333354-24333373	MS.gene46353:intron	50.0%
	ACTTGCGCTCGTATCAGTGG+AGG	+	chr8.4:24332764-24332783	None:intergenic	55.0%
	CACTGATACGAGCGCAAGTC+TGG	-	chr8.4:24332765-24332784	MS.gene46353:intron	55.0%
	CAGACTTGCGCTCGTATCAG+TGG	+	chr8.4:24332767-24332786	None:intergenic	55.0%
	GATACGAGCGCAAGTCTGGT+AGG	-	chr8.4:24332769-24332788	MS.gene46353:intron	55.0%
	TAAGGGAGGACGACCAAGAC+TGG	-	chr8.4:24333430-24333449	MS.gene46353:intron	55.0%
!	TCTGTGGGGGCGTATTCTCT+AGG	+	chr8.4:24332999-24333018	None:intergenic	55.0%
!!	CGGCTTGTTGGGGCATATAG+AGG	-	chr8.4:24333299-24333318	MS.gene46353:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.4	gene	24332685	24333838	24332685	ID=MS.gene46353
chr8.4	mRNA	24332685	24333838	24332685	ID=MS.gene46353.t1;Parent=MS.gene46353
chr8.4	exon	24333505	24333838	24333505	ID=MS.gene46353.t1.exon1;Parent=MS.gene46353.t1
chr8.4	CDS	24333505	24333838	24333505	ID=cds.MS.gene46353.t1;Parent=MS.gene46353.t1
chr8.4	exon	24332956	24333171	24332956	ID=MS.gene46353.t1.exon2;Parent=MS.gene46353.t1
chr8.4	CDS	24332956	24333171	24332956	ID=cds.MS.gene46353.t1;Parent=MS.gene46353.t1
chr8.4	exon	24332685	24332779	24332685	ID=MS.gene46353.t1.exon3;Parent=MS.gene46353.t1
chr8.4	CDS	24332685	24332779	24332685	ID=cds.MS.gene46353.t1;Parent=MS.gene46353.t1

Gene Sequence

>MS.gene46353

ATGGCATCGCTTTCAAACCTATATCTGAGTGATGAGGAAGATGATCTTGAGATTGCAATCGAGGAGACTCCTAATTCCTCCACTGATACGAGCGCAAGTCTGGTAGGCAGATTCCTTACAGATAAACCTGTGAGGGGTTATATGATGACATCGATCATGGAAAAATTTTGGCACCCGGGTAGAGGAGTAAACATCAAAGAGATTGAACCAAACCTCTTCACATTCAAATTTTTCCATTACCGTGATATGCATACCATATTGAAGAAAGGACCTTGGTATTTTGATAATAACCTCCTGATTCTCGACATTCTCCTAGAGAATACGCCCCCACAGAGTATTCCGCTTATTTCAGTTCCATTCTGGGTTCGAATTTCTGATATACCAGTAGGGTTTATGGCAGAAAAAGTGGGGAAGGATCTCGGTAACTTTATAGGAGACTTTTTGGAGTACGACGCCAAGAACAGTGCCAATCACCTCAGGTCATACATGCAGATCAGAGTGCTCCTAGATGTTACTAAACCTCTTAAAAGACAGAAGAAAATTAAGCGTCCGGGAGGGGAATCACATACAGTTCGCTTCACCTATGAACGATTGGGGAATTTTTGTTACTATTGCGGCTTGTTGGGGCATATAGAGGACTATTGTGATAAGCTCTATTCTGTTGAAGCTGATGATGGAGTTCGCCATTGGGGTCCTGAACTAAGAGTCGTTCAACAACGCAATTCCGGCAAAGGTTCAAGATGGTTAAGGGAGGACGACCAAGACTGGTCATCGCCATTAGTTAAGGTTCATCAGAAAGTCGACACAAGTTCCGGCGGAATCGAAAACAGTAACGCCAAGACATTAAATTCCCATTCAATTGCTCCCAAAACGGTTACATTAGGTGACATGCTAAAAAATCCCAATTTAATTCGCCCAACTGTGAGCAATAAACACACACATTCATCCCCTCATGCTTCAACTTTCATGGAAGAAGAAAATGCTGCAGTTTTTTCTACAAACTTGAAACGGTCCAGGAATGATCTGAATGGTAATAATCATCTTGCTGACTCATCTCAGGTTCCTCCCATGAAGTCACTAATCACGCCATCTCCCTCTTCCAAAGAGTCATCCAATTCATCTCCATCTTCCCCAATGGAGACTTCACAACGTGA

Protein sequence

>MS.gene46353.t1

MASLSNLYLSDEEDDLEIAIEETPNSSTDTSASLVGRFLTDKPVRGYMMTSIMEKFWHPGRGVNIKEIEPNLFTFKFFHYRDMHTILKKGPWYFDNNLLILDILLENTPPQTDDGVRHWGPELRVVQQRNSGKGSRWLREDDQDWSSPLVKVHQKVDTSSGGIENSNAKTLNSHSIAPKTVTLGSSHEVTNHAISLFQRVIQFISIFPNGDFTT