AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene057828

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057828.t1 MTR_3g053920 57.681 345 51 3 1 315 1 280 2.43e-122 360
MS.gene057828.t1 MTR_2g061500 86.822 129 17 0 1 129 1 129 6.65e-77 238
MS.gene057828.t1 MTR_8g463110 65.517 145 50 0 375 519 180 324 5.30e-61 212
MS.gene057828.t1 MTR_8g463110 58.475 118 47 1 258 373 1 118 1.18e-27 117
MS.gene057828.t1 MTR_4g103530 83.505 97 16 0 55 151 1 97 8.32e-54 180
MS.gene057828.t1 MTR_4g020630 54.545 132 60 0 388 519 129 260 5.34e-45 166
MS.gene057828.t1 MTR_6g034215 58.915 129 53 0 387 515 196 324 9.83e-45 160
MS.gene057828.t1 MTR_7g011710 68.235 85 27 0 55 139 1 85 1.72e-36 133
MS.gene057828.t1 MTR_6g033215 34.682 173 111 1 29 199 122 294 8.73e-33 127
MS.gene057828.t1 MTR_0010s0370 37.288 177 101 3 8 177 4 177 1.11e-31 120
MS.gene057828.t1 MTR_0010s0350 37.288 177 101 3 8 177 4 177 1.11e-31 120
MS.gene057828.t1 MTR_1g100687 49.000 100 51 0 389 488 132 231 2.53e-28 113
MS.gene057828.t1 MTR_3g044860 43.089 123 44 1 388 510 85 181 4.84e-26 108
MS.gene057828.t1 MTR_7g063500 56.923 65 28 0 455 519 38 102 2.89e-19 84.3
MS.gene057828.t1 MTR_0042s0130 33.645 107 71 0 376 482 220 326 2.16e-15 77.8
MS.gene057828.t1 MTR_7g056813 53.846 65 28 1 455 519 8 70 2.73e-14 75.1
MS.gene057828.t1 MTR_1g051330 31.405 121 82 1 388 508 348 467 2.84e-14 76.3
MS.gene057828.t1 MTR_1g036720 33.981 103 68 0 11 113 9 111 3.66e-13 66.2
MS.gene057828.t1 MTR_6g009010 47.541 61 32 0 389 449 201 261 6.84e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057828.t1 AT2G17920 26.168 214 150 5 8 216 9 219 1.34e-16 81.3
MS.gene057828.t1 AT3G57587 25.806 217 147 6 8 216 9 219 4.10e-14 74.3
MS.gene057828.t1 AT2G13450 26.230 183 129 4 36 215 39 218 1.30e-13 73.2
MS.gene057828.t1 AT3G31430 26.415 212 148 4 8 215 104 311 1.56e-13 72.4
MS.gene057828.t1 AT2G41590 24.436 266 170 7 8 266 9 250 2.43e-13 72.0
MS.gene057828.t1 AT5G36228 25.641 195 137 4 36 226 39 229 7.97e-13 70.5
MS.gene057828.t1 AT3G47920 26.761 142 100 2 77 216 9 148 2.29e-11 65.5

Find 148 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCGCACATGAAGATAATTT+TGG 0.225614 4.4:+83817550 None:intergenic
CATCAACCTTATGGTGAAAT+TGG 0.236408 4.4:+83819344 None:intergenic
AGACATACGCTCGCTGAAAT+AGG 0.266771 4.4:+83819429 None:intergenic
GCTCGCTGAAATAGGCAAAT+TGG 0.281041 4.4:+83819437 None:intergenic
CGTTGAATCATATCGAGTTT+TGG 0.295213 4.4:-83819228 MS.gene057828:CDS
AGGACTTTGTTACTAATTCT+TGG 0.298190 4.4:-83817600 MS.gene057828:CDS
CCTAAGGTAGGTCAAGGTAT+AGG 0.308290 4.4:-83819169 MS.gene057828:CDS
TGCTACTAACCGGTGGTTAC+AGG 0.311368 4.4:-83818843 MS.gene057828:CDS
ATTTGCTGCTGATGGGAGTA+TGG 0.311575 4.4:-83818516 MS.gene057828:CDS
TGCTGCCCAAAATGCTGCTT+TGG 0.313789 4.4:-83818756 MS.gene057828:CDS
CCTGACCGCCCTTTGGTGCT+CGG 0.319881 4.4:-83818647 MS.gene057828:CDS
TCATAGCGAAAATGACGTTT+AGG 0.351271 4.4:+83817652 None:intergenic
AGTATGGGAAATGTTGTAAT+AGG 0.360421 4.4:-83818500 MS.gene057828:CDS
CGCGGGCAGCATCAACCTTA+TGG 0.370382 4.4:+83819335 None:intergenic
ACAACTTGTTCATCATCTAT+AGG 0.371031 4.4:+83818428 None:intergenic
CTGATGATGGAGTCCGTAGC+TGG 0.379112 4.4:-83818907 MS.gene057828:CDS
AGGTGAGACCTTCAAGGTTC+AGG 0.380090 4.4:+83819560 None:intergenic
TATCCCAAGATGATGCATAT+TGG 0.383708 4.4:-83817378 MS.gene057828:CDS
CTAAGGTAGGTCAAGGTATA+GGG 0.385026 4.4:-83819168 MS.gene057828:CDS
GTAGCGATCAGCAACGGATT+TGG 0.386387 4.4:+83819372 None:intergenic
AAGCCTACATCACAAAGAAT+TGG 0.386996 4.4:-83818872 MS.gene057828:CDS
CAGGTCCATGGTTTACCGTT+TGG 0.392766 4.4:-83819202 MS.gene057828:CDS
GCCATCATACGGTCATGAAT+AGG 0.393540 4.4:+83818818 None:intergenic
CTGACCGCCCTTTGGTGCTC+GGG 0.394195 4.4:-83818646 MS.gene057828:CDS
TTTGCTTCCTGACCGCCCTT+TGG 0.402936 4.4:-83818654 MS.gene057828:CDS
CTTGTTCCAATTTCACCATA+AGG 0.405419 4.4:-83819350 MS.gene057828:CDS
CCTATACCTTGACCTACCTT+AGG 0.411535 4.4:+83819169 None:intergenic
CCATCATACGGTCATGAATA+GGG 0.411856 4.4:+83818819 None:intergenic
GGTGCAACATTAACAAGAAT+AGG 0.413706 4.4:+83817694 None:intergenic
TGATTCAACGGGACAAAACT+TGG 0.422444 4.4:+83819241 None:intergenic
GTCGCCAATATGCATCATCT+TGG 0.435832 4.4:+83817374 None:intergenic
ACCTTCAAGGTTCAGGTTGG+TGG 0.438585 4.4:+83819567 None:intergenic
ACACGCCACTCTTGTTTCAA+TGG 0.441938 4.4:+83819055 None:intergenic
TGGCGTGTTCGTGCTACTAA+TGG 0.442394 4.4:-83819040 MS.gene057828:CDS
GCATCTAGAACCGGGGTTCA+AGG 0.444158 4.4:-83817620 MS.gene057828:CDS
GTTCCAATTCTTTGTGATGT+AGG 0.444612 4.4:+83818869 None:intergenic
ATGTTTCATAGCAGTGAGTT+GGG 0.449017 4.4:+83818787 None:intergenic
TGCATGGAAGCCAGGCAAAA+AGG 0.450638 4.4:-83819404 MS.gene057828:CDS
AAATGCGTGGCATCTAGAAC+CGG 0.451100 4.4:-83817629 MS.gene057828:CDS
GACCTATGAGACAGTGTTCA+AGG 0.454398 4.4:+83819482 None:intergenic
TTTGAGCTTGAATCTGATGA+TGG 0.454699 4.4:-83818920 MS.gene057828:CDS
CCGAGCACCAAAGGGCGGTC+AGG 0.455156 4.4:+83818647 None:intergenic
CTTTGTTACTAATTCTTGGC+AGG 0.457702 4.4:-83817596 MS.gene057828:CDS
GACACACGGCTTGGTGCTAT+AGG 0.460558 4.4:-83817451 MS.gene057828:CDS
GTCCTTGAACACTGTCTCAT+AGG 0.463466 4.4:-83819484 MS.gene057828:CDS
CCCACCAACCTGAACCTTGA+AGG 0.465639 4.4:-83819568 MS.gene057828:CDS
GTGTGTCTTGTAATTGTTTG+CGG 0.468019 4.4:+83817467 None:intergenic
ACGACCATCATAAGATTTGA+AGG 0.470830 4.4:+83819132 None:intergenic
GATTCAAGCTCAAACAAGTC+TGG 0.472786 4.4:+83818929 None:intergenic
GCAGGTAGCCCGAGCACCAA+AGG 0.473186 4.4:+83818638 None:intergenic
TTGGAACCGCTGCTACTAAC+CGG 0.473512 4.4:-83818853 MS.gene057828:CDS
TGCACCTACACCTCGGCTAC+AGG 0.477940 4.4:-83817677 MS.gene057828:CDS
AAAACTCGATATGATTCAAC+GGG 0.482478 4.4:+83819230 None:intergenic
TGGTGCTATAGGTGAAGATC+AGG 0.483633 4.4:-83817440 MS.gene057828:CDS
ACAAAACTTGGAACGACACC+AGG 0.484815 4.4:+83819253 None:intergenic
CTGGTTCAGACTCAAGGTTA+AGG 0.485928 4.4:+83819518 None:intergenic
CAGACAAGGTGAGACCTTCA+AGG 0.488448 4.4:+83819554 None:intergenic
GTGCAACATTAACAAGAATA+GGG 0.489605 4.4:+83817695 None:intergenic
TTCCTCTTGTACTTCAGCAT+CGG 0.491720 4.4:+83818595 None:intergenic
TGAGGTGCGGTCCCCAGCTA+CGG 0.492668 4.4:+83818894 None:intergenic
TGTCACAGGAGTGGACTGTT+GGG 0.496173 4.4:-83818971 MS.gene057828:CDS
AGGGCGGTCAGGAAGCAAAC+TGG 0.496686 4.4:+83818658 None:intergenic
TGTTGTACCTGTGGAGGAAG+AGG 0.502378 4.4:+83818685 None:intergenic
GTGGTTCGGATTTGAAGAAA+AGG 0.503559 4.4:-83818571 MS.gene057828:CDS
GTCATGGACCGTATTTCCCC+TGG 0.504442 4.4:-83819271 MS.gene057828:CDS
TTGTCACAGGAGTGGACTGT+TGG 0.505588 4.4:-83818972 MS.gene057828:CDS
CTGCTGCCCTCTTCCTCCAC+AGG 0.506951 4.4:-83818692 MS.gene057828:CDS
GAACGACACCAGGGGAAATA+CGG 0.507266 4.4:+83819263 None:intergenic
TCGCCAATATGCATCATCTT+GGG 0.507860 4.4:+83817375 None:intergenic
GACAACGTGCAAAGACTCAT+TGG 0.509304 4.4:-83817354 MS.gene057828:intron
GCATCGGATTCACTTGAAAA+CGG 0.511111 4.4:+83818611 None:intergenic
CATGTTTCATAGCAGTGAGT+TGG 0.516479 4.4:+83818786 None:intergenic
CTTCATGTGCGGAGGACATG+TGG 0.516984 4.4:-83817540 MS.gene057828:CDS
ATGTCTCGTGCATGGAAGCC+AGG 0.520191 4.4:-83819412 MS.gene057828:CDS
CTGTCTCATAGGTCGAGTCC+TGG 0.520328 4.4:-83819473 MS.gene057828:CDS
TAGGATCAAATGTTAGTCAT+GGG 0.524354 4.4:-83818481 MS.gene057828:CDS
CCTTCAAGGTTCAGGTTGGT+GGG 0.525848 4.4:+83819568 None:intergenic
CCCTATTCATGACCGTATGA+TGG 0.528866 4.4:-83818819 MS.gene057828:CDS
GGTACCTTCAAATCTTATGA+TGG 0.533160 4.4:-83819136 MS.gene057828:CDS
TGATGATGGAGTCCGTAGCT+GGG 0.536838 4.4:-83818906 MS.gene057828:CDS
GTTTGGTTTCATTCAACCTA+AGG 0.537034 4.4:-83819185 MS.gene057828:CDS
CAGGTAGCCCGAGCACCAAA+GGG 0.541250 4.4:+83818639 None:intergenic
GCTGCCCGCGTTCTTGATGA+AGG 0.544526 4.4:-83819322 MS.gene057828:CDS
TCCAAAATTATCTTCATGTG+CGG 0.549613 4.4:-83817551 MS.gene057828:CDS
ATAGGATCAAATGTTAGTCA+TGG 0.550331 4.4:-83818482 MS.gene057828:CDS
GAAGTATCATTTGCTGCTGA+TGG 0.551082 4.4:-83818524 MS.gene057828:CDS
TCACTTGAAAACGGAACAGC+AGG 0.554387 4.4:+83818620 None:intergenic
GCGTTCTTGATGAAGGTCCA+TGG 0.555957 4.4:-83819315 MS.gene057828:CDS
AGTACAAGAGGAAAGTGGTT+CGG 0.559488 4.4:-83818585 MS.gene057828:CDS
TTCTTTGTGATGTAGGCTTG+AGG 0.561689 4.4:+83818876 None:intergenic
ATAGGGTAATGATCGGAAGC+AGG 0.563188 4.4:+83817712 None:intergenic
ATTGGATCTCGCGATCAGCC+AGG 0.565008 4.4:+83819455 None:intergenic
GGTTTCATTCAACCTAAGGT+AGG 0.570176 4.4:-83819181 MS.gene057828:CDS
CAAAACTCGATATGATTCAA+CGG 0.571805 4.4:+83819229 None:intergenic
AGGTTCGAATGCTTGAGCTC+CGG 0.572904 4.4:-83817420 MS.gene057828:CDS
GTAACAAAGTCCTTGAACCC+CGG 0.574550 4.4:+83817610 None:intergenic
TTAGGTTGAATGAAACCAAA+CGG 0.575564 4.4:+83819187 None:intergenic
GTGCGGAGGACATGTGGGAG+TGG 0.576077 4.4:-83817534 MS.gene057828:CDS
GGTCTCACCTTGTCTGAGGA+AGG 0.576121 4.4:-83819547 MS.gene057828:CDS
GATGATATGTATGTAACTGC+TGG 0.576587 4.4:-83818452 MS.gene057828:CDS
ATTCAACCTAAGGTAGGTCA+AGG 0.576603 4.4:-83819175 MS.gene057828:CDS
GATCGGAAGCAGGTGCCACA+AGG 0.578444 4.4:+83817722 None:intergenic
CAATTACAAGACACACGGCT+TGG 0.579131 4.4:-83817460 MS.gene057828:CDS
AACAAGAATAGGGTAATGAT+CGG 0.579337 4.4:+83817705 None:intergenic
AATGCGTGGCATCTAGAACC+GGG 0.581098 4.4:-83817628 MS.gene057828:CDS
GGAACCTGTAGCCGAGGTGT+AGG 0.594263 4.4:+83817673 None:intergenic
AAAATTATCTTCATGTGCGG+AGG 0.597671 4.4:-83817548 MS.gene057828:CDS
TAGCTCTTATATGAGACTCA+AGG 0.598368 4.4:-83819098 MS.gene057828:CDS
ATGCGTGGCATCTAGAACCG+GGG 0.598375 4.4:-83817627 MS.gene057828:CDS
ATCCGATGCTGAAGTACAAG+AGG 0.598546 4.4:-83818597 MS.gene057828:CDS
GTTGTACCTGTGGAGGAAGA+GGG 0.604958 4.4:+83818686 None:intergenic
TGAAGGTCTCACCTTGTCTG+AGG 0.607250 4.4:-83819551 MS.gene057828:CDS
TGAAAATTATCATAAAGCCA+TGG 0.609544 4.4:+83819298 None:intergenic
TTTGCTGCTGATGGGAGTAT+GGG 0.609763 4.4:-83818515 MS.gene057828:CDS
GAGACCTTCAAGGTTCAGGT+TGG 0.610025 4.4:+83819564 None:intergenic
GCGAGCGTATGTCTCGTGCA+TGG 0.610479 4.4:-83819420 MS.gene057828:CDS
GGGACTGAAAAGCCATCATA+CGG 0.611670 4.4:+83818807 None:intergenic
TTCATGTGCGGAGGACATGT+GGG 0.613872 4.4:-83817539 MS.gene057828:CDS
ACTGGAGGCTGTTGTACCTG+TGG 0.614937 4.4:+83818676 None:intergenic
GAATAGGGTCCTGTAACCAC+CGG 0.616221 4.4:+83818834 None:intergenic
AAGTATCATTTGCTGCTGAT+GGG 0.618174 4.4:-83818523 MS.gene057828:CDS
ATCAAATGTTAGTCATGGGG+GGG 0.619233 4.4:-83818477 MS.gene057828:CDS
GATGATGGAGTCCGTAGCTG+GGG 0.622379 4.4:-83818905 MS.gene057828:CDS
CGTTTAGGAACCTGTAGCCG+AGG 0.628353 4.4:+83817667 None:intergenic
TGAAACCAAACGGTAAACCA+TGG 0.633342 4.4:+83819197 None:intergenic
GACGAGACCTTCCTCAGACA+AGG 0.633356 4.4:+83819540 None:intergenic
GCTGAAGTACAAGAGGAAAG+TGG 0.644430 4.4:-83818590 MS.gene057828:CDS
AGGATCAAATGTTAGTCATG+GGG 0.645313 4.4:-83818480 MS.gene057828:CDS
TAACCACCGGTTAGTAGCAG+CGG 0.646670 4.4:+83818847 None:intergenic
GAACAAGTAGCGATCAGCAA+CGG 0.646937 4.4:+83819366 None:intergenic
CTGTTCCATTGAAACAAGAG+TGG 0.649479 4.4:-83819060 MS.gene057828:CDS
TGGACCTTCATCAAGAACGC+GGG 0.650501 4.4:+83819318 None:intergenic
GGATCAAATGTTAGTCATGG+GGG 0.656706 4.4:-83818479 MS.gene057828:CDS
ATCGGAAGCAGGTGCCACAA+GGG 0.656876 4.4:+83817723 None:intergenic
TTAATGTTGCACCTACACCT+CGG 0.657578 4.4:-83817684 MS.gene057828:CDS
GCGGTCAGGAAGCAAACTGG+AGG 0.657784 4.4:+83818661 None:intergenic
GGAGGCTGTTGTACCTGTGG+AGG 0.662420 4.4:+83818679 None:intergenic
CAAATGATACTTCATTCTGA+CGG 0.665682 4.4:+83818534 None:intergenic
GATCAAATGTTAGTCATGGG+GGG 0.667402 4.4:-83818478 MS.gene057828:CDS
GAACCGCTGCTACTAACCGG+TGG 0.672959 4.4:-83818850 MS.gene057828:CDS
GTAGCCCGAGCACCAAAGGG+CGG 0.673505 4.4:+83818642 None:intergenic
ATGGACCTTCATCAAGAACG+CGG 0.680146 4.4:+83819317 None:intergenic
CAAAACTTGGAACGACACCA+GGG 0.692534 4.4:+83819254 None:intergenic
GCAAACAATTACAAGACACA+CGG 0.695099 4.4:-83817465 MS.gene057828:CDS
AAAACTTGGAACGACACCAG+GGG 0.701242 4.4:+83819255 None:intergenic
TGTGATGTAGGCTTGAGGTG+CGG 0.713261 4.4:+83818881 None:intergenic
TGCTACTGTTGAGACCCTTG+TGG 0.717964 4.4:-83817737 MS.gene057828:intron
ACTGTTGGGACATACTGACA+AGG 0.820852 4.4:-83818957 MS.gene057828:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACCTTTAAATATGAAAAACT+TGG - chr4.4:83817829-83817848 MS.gene057828:intron 20.0%
!! TAACAATTTCAACAGTAATA+TGG + chr4.4:83818721-83818740 None:intergenic 20.0%
!!! ACCAAGTTTTTCATATTTAA+AGG + chr4.4:83817833-83817852 None:intergenic 20.0%
!!! GGAGTTTTTCAATTTTATTT+CGG + chr4.4:83818583-83818602 None:intergenic 20.0%
!!! TGATAATTTTCATATTGTCA+TGG - chr4.4:83817543-83817562 MS.gene057828:CDS 20.0%
! TGAAAATTATCATAAAGCCA+TGG + chr4.4:83817535-83817554 None:intergenic 25.0%
AAAACTCGATATGATTCAAC+GGG + chr4.4:83817603-83817622 None:intergenic 30.0%
AACAAGAATAGGGTAATGAT+CGG + chr4.4:83819128-83819147 None:intergenic 30.0%
AATCGTAACCAAGCAAAAAA+CGG + chr4.4:83818604-83818623 None:intergenic 30.0%
AGATGATGAACAAGTTGTAA+TGG - chr4.4:83818407-83818426 MS.gene057828:intron 30.0%
AGGACTTTGTTACTAATTCT+TGG - chr4.4:83819230-83819249 MS.gene057828:CDS 30.0%
AGTATGGGAAATGTTGTAAT+AGG - chr4.4:83818330-83818349 MS.gene057828:intron 30.0%
ATAGGATCAAATGTTAGTCA+TGG - chr4.4:83818348-83818367 MS.gene057828:intron 30.0%
CAAAACTCGATATGATTCAA+CGG + chr4.4:83817604-83817623 None:intergenic 30.0%
CAAATGATACTTCATTCTGA+CGG + chr4.4:83818299-83818318 None:intergenic 30.0%
GAAATTGTTAACAACACTCT+TGG - chr4.4:83818731-83818750 MS.gene057828:CDS 30.0%
GTGCAACATTAACAAGAATA+GGG + chr4.4:83819138-83819157 None:intergenic 30.0%
TACACTTGGTTTAAAAGTCT+TGG - chr4.4:83818998-83819017 MS.gene057828:CDS 30.0%
TAGGATCAAATGTTAGTCAT+GGG - chr4.4:83818349-83818368 MS.gene057828:intron 30.0%
TCCAAAATTATCTTCATGTG+CGG - chr4.4:83819279-83819298 MS.gene057828:CDS 30.0%
! ACAACTTGTTCATCATCTAT+AGG + chr4.4:83818405-83818424 None:intergenic 30.0%
! AGACTTTTAAACCAAGTGTA+CGG + chr4.4:83818998-83819017 None:intergenic 30.0%
! ATAAACGTTGCATTCTTTTC+CGG + chr4.4:83819432-83819451 None:intergenic 30.0%
! TTAACAACACTCTTGGTAAT+TGG - chr4.4:83818738-83818757 MS.gene057828:CDS 30.0%
!! TTAGGTTGAATGAAACCAAA+CGG + chr4.4:83817646-83817665 None:intergenic 30.0%
!!! AACTTGGTATTTTTTGTCAC+AGG - chr4.4:83817845-83817864 MS.gene057828:intron 30.0%
AAAATTATCTTCATGTGCGG+AGG - chr4.4:83819282-83819301 MS.gene057828:CDS 35.0%
AAATCTCCTAAAATGCACCA+TGG + chr4.4:83818854-83818873 None:intergenic 35.0%
AAGCCTACATCACAAAGAAT+TGG - chr4.4:83817958-83817977 MS.gene057828:intron 35.0%
ACGACCATCATAAGATTTGA+AGG + chr4.4:83817701-83817720 None:intergenic 35.0%
AGGATCAAATGTTAGTCATG+GGG - chr4.4:83818350-83818369 MS.gene057828:intron 35.0%
ATGTTTCATAGCAGTGAGTT+GGG + chr4.4:83818046-83818065 None:intergenic 35.0%
ATTAGGATAGCCATAATAGC+CGG + chr4.4:83818771-83818790 None:intergenic 35.0%
CATCAACCTTATGGTGAAAT+TGG + chr4.4:83817489-83817508 None:intergenic 35.0%
CATCATCAAGAGAAAGTTTG+CGG + chr4.4:83819567-83819586 None:intergenic 35.0%
CTTGTTCCAATTTCACCATA+AGG - chr4.4:83817480-83817499 MS.gene057828:CDS 35.0%
CTTTGTTACTAATTCTTGGC+AGG - chr4.4:83819234-83819253 MS.gene057828:CDS 35.0%
GATGATATGTATGTAACTGC+TGG - chr4.4:83818378-83818397 MS.gene057828:intron 35.0%
GCAAACAATTACAAGACACA+CGG - chr4.4:83819365-83819384 MS.gene057828:CDS 35.0%
GCTTTGGCTAAAAAAGGTAA+TGG - chr4.4:83818090-83818109 MS.gene057828:intron 35.0%
GGTACCTTCAAATCTTATGA+TGG - chr4.4:83817694-83817713 MS.gene057828:CDS 35.0%
GGTGCAACATTAACAAGAAT+AGG + chr4.4:83819139-83819158 None:intergenic 35.0%
GTGCTCTTGCAAATGATTTA+TGG - chr4.4:83819053-83819072 MS.gene057828:CDS 35.0%
GTGTCTCACTTAGGAATAAA+AGG + chr4.4:83818553-83818572 None:intergenic 35.0%
GTGTGTCTTGTAATTGTTTG+CGG + chr4.4:83819366-83819385 None:intergenic 35.0%
GTTCCAATTCTTTGTGATGT+AGG + chr4.4:83817964-83817983 None:intergenic 35.0%
TAGCTCTTATATGAGACTCA+AGG - chr4.4:83817732-83817751 MS.gene057828:intron 35.0%
TATCCCAAGATGATGCATAT+TGG - chr4.4:83819452-83819471 MS.gene057828:CDS 35.0%
TATTATGGCTATCCTAATGG+AGG - chr4.4:83818773-83818792 MS.gene057828:CDS 35.0%
TCACTTAGGAATAAAAGGTC+CGG + chr4.4:83818548-83818567 None:intergenic 35.0%
TCATAGCGAAAATGACGTTT+AGG + chr4.4:83819181-83819200 None:intergenic 35.0%
TTTAGATGCGAGTGAGAAAA+GGG - chr4.4:83818883-83818902 MS.gene057828:CDS 35.0%
TTTGAGCTTGAATCTGATGA+TGG - chr4.4:83817910-83817929 MS.gene057828:intron 35.0%
! AAGCCATTGATAATCCATTG+GGG + chr4.4:83818923-83818942 None:intergenic 35.0%
! AAGTATCATTTGCTGCTGAT+GGG - chr4.4:83818307-83818326 MS.gene057828:intron 35.0%
! ATTTTCGCTATGAAAATGCG+TGG - chr4.4:83819188-83819207 MS.gene057828:CDS 35.0%
! CAACTGTCTTCTCAATTTTC+AGG - chr4.4:83818827-83818846 MS.gene057828:CDS 35.0%
! CAAGGTATAGGGAATTTTCT+AGG - chr4.4:83817673-83817692 MS.gene057828:CDS 35.0%
! CGTTGAATCATATCGAGTTT+TGG - chr4.4:83817602-83817621 MS.gene057828:CDS 35.0%
! GAAGCCATTGATAATCCATT+GGG + chr4.4:83818924-83818943 None:intergenic 35.0%
! GTTTGGTTTCATTCAACCTA+AGG - chr4.4:83817645-83817664 MS.gene057828:CDS 35.0%
! TCCGCACATGAAGATAATTT+TGG + chr4.4:83819283-83819302 None:intergenic 35.0%
! TTTAGCCAAAGCAGCATTTT+GGG + chr4.4:83818082-83818101 None:intergenic 35.0%
! TTTTAGATGCGAGTGAGAAA+AGG - chr4.4:83818882-83818901 MS.gene057828:CDS 35.0%
! TTTTAGCCAAAGCAGCATTT+TGG + chr4.4:83818083-83818102 None:intergenic 35.0%
!! AATGCTGCTTTGGCTAAAAA+AGG - chr4.4:83818084-83818103 MS.gene057828:intron 35.0%
!!! GAAAAACTCCGTTTTTTGCT+TGG - chr4.4:83818593-83818612 MS.gene057828:CDS 35.0%
!!! TCATATCGAGTTTTGGATTC+AGG - chr4.4:83817609-83817628 MS.gene057828:CDS 35.0%
AAGACTCATTGGTACAAGGA+TGG - chr4.4:83819487-83819506 MS.gene057828:CDS 40.0%
AGTACAAGAGGAAAGTGGTT+CGG - chr4.4:83818245-83818264 MS.gene057828:intron 40.0%
ATCAAATGTTAGTCATGGGG+GGG - chr4.4:83818353-83818372 MS.gene057828:intron 40.0%
ATTCAACCTAAGGTAGGTCA+AGG - chr4.4:83817655-83817674 MS.gene057828:CDS 40.0%
CATGTTTCATAGCAGTGAGT+TGG + chr4.4:83818047-83818066 None:intergenic 40.0%
CCAAAATAAAGCTAAACCCC+CGG + chr4.4:83818657-83818676 None:intergenic 40.0%
CCATCATACGGTCATGAATA+GGG + chr4.4:83818014-83818033 None:intergenic 40.0%
CTAAGGTAGGTCAAGGTATA+GGG - chr4.4:83817662-83817681 MS.gene057828:CDS 40.0%
CTGTTCCATTGAAACAAGAG+TGG - chr4.4:83817770-83817789 MS.gene057828:intron 40.0%
GATCAAATGTTAGTCATGGG+GGG - chr4.4:83818352-83818371 MS.gene057828:intron 40.0%
GATGAACAAGTTGTAATGGC+AGG - chr4.4:83818411-83818430 MS.gene057828:intron 40.0%
GATTCAAGCTCAAACAAGTC+TGG + chr4.4:83817904-83817923 None:intergenic 40.0%
GCATCGGATTCACTTGAAAA+CGG + chr4.4:83818222-83818241 None:intergenic 40.0%
GGATCAAATGTTAGTCATGG+GGG - chr4.4:83818351-83818370 MS.gene057828:intron 40.0%
GGCTATTATGGCTATCCTAA+TGG - chr4.4:83818770-83818789 MS.gene057828:CDS 40.0%
GGTTTCATTCAACCTAAGGT+AGG - chr4.4:83817649-83817668 MS.gene057828:CDS 40.0%
TCGCCAATATGCATCATCTT+GGG + chr4.4:83819458-83819477 None:intergenic 40.0%
TGAAACCAAACGGTAAACCA+TGG + chr4.4:83817636-83817655 None:intergenic 40.0%
TGATTCAACGGGACAAAACT+TGG + chr4.4:83817592-83817611 None:intergenic 40.0%
TGCAAAGACTCATTGGTACA+AGG - chr4.4:83819483-83819502 MS.gene057828:CDS 40.0%
TTAATGTTGCACCTACACCT+CGG - chr4.4:83819146-83819165 MS.gene057828:CDS 40.0%
TTAGATGCGAGTGAGAAAAG+GGG - chr4.4:83818884-83818903 MS.gene057828:CDS 40.0%
TTCCTCTTGTACTTCAGCAT+CGG + chr4.4:83818238-83818257 None:intergenic 40.0%
TTCTTTGTGATGTAGGCTTG+AGG + chr4.4:83817957-83817976 None:intergenic 40.0%
TTGTCGAAGAAAGTTCCAAG+CGG + chr4.4:83818810-83818829 None:intergenic 40.0%
! GAAGTATCATTTGCTGCTGA+TGG - chr4.4:83818306-83818325 MS.gene057828:intron 40.0%
! GACGAAATTTAAGACCCCAA+TGG - chr4.4:83818906-83818925 MS.gene057828:CDS 40.0%
! GGAAGCCATTGATAATCCAT+TGG + chr4.4:83818925-83818944 None:intergenic 40.0%
! GTGGTTCGGATTTGAAGAAA+AGG - chr4.4:83818259-83818278 MS.gene057828:intron 40.0%
! GTTTACCTTTTTACGAGCAG+TGG + chr4.4:83819545-83819564 None:intergenic 40.0%
!! AGACCCCAATGGATTATCAA+TGG - chr4.4:83818917-83818936 MS.gene057828:CDS 40.0%
!! CTTTCTCTTGATGATGAAGC+AGG - chr4.4:83819571-83819590 MS.gene057828:CDS 40.0%
!!! CTTCTCAATTTTCAGGTCCA+TGG - chr4.4:83818834-83818853 MS.gene057828:CDS 40.0%
!!! GGTATTTTTTGTCACAGGAG+TGG - chr4.4:83817850-83817869 MS.gene057828:intron 40.0%
AAAACTTGGAACGACACCAG+GGG + chr4.4:83817578-83817597 None:intergenic 45.0%
ACAAAACTTGGAACGACACC+AGG + chr4.4:83817580-83817599 None:intergenic 45.0%
ACTGTTGGGACATACTGACA+AGG - chr4.4:83817873-83817892 MS.gene057828:intron 45.0%
AGACATACGCTCGCTGAAAT+AGG + chr4.4:83817404-83817423 None:intergenic 45.0%
ATAGGGTAATGATCGGAAGC+AGG + chr4.4:83819121-83819140 None:intergenic 45.0%
ATCCGATGCTGAAGTACAAG+AGG - chr4.4:83818233-83818252 MS.gene057828:intron 45.0%
ATGGACCTTCATCAAGAACG+CGG + chr4.4:83817516-83817535 None:intergenic 45.0%
CAAAACTTGGAACGACACCA+GGG + chr4.4:83817579-83817598 None:intergenic 45.0%
CAATTACAAGACACACGGCT+TGG - chr4.4:83819370-83819389 MS.gene057828:CDS 45.0%
CCCTATTCATGACCGTATGA+TGG - chr4.4:83818011-83818030 MS.gene057828:intron 45.0%
CCGACCTTAAATACCTAGTC+CGG - chr4.4:83818513-83818532 MS.gene057828:CDS 45.0%
CCTAAGGTAGGTCAAGGTAT+AGG - chr4.4:83817661-83817680 MS.gene057828:CDS 45.0%
CCTATACCTTGACCTACCTT+AGG + chr4.4:83817664-83817683 None:intergenic 45.0%
CTGAATCAAGAACCGCTTGA+CGG + chr4.4:83818946-83818965 None:intergenic 45.0%
CTGGTTCAGACTCAAGGTTA+AGG + chr4.4:83817315-83817334 None:intergenic 45.0%
GAACAAGTAGCGATCAGCAA+CGG + chr4.4:83817467-83817486 None:intergenic 45.0%
GACAACGTGCAAAGACTCAT+TGG - chr4.4:83819476-83819495 MS.gene057828:CDS 45.0%
GACCTATGAGACAGTGTTCA+AGG + chr4.4:83817351-83817370 None:intergenic 45.0%
GCCATCATACGGTCATGAAT+AGG + chr4.4:83818015-83818034 None:intergenic 45.0%
GCTACTAGACTCATTCACCT+AGG + chr4.4:83818455-83818474 None:intergenic 45.0%
GCTCGCTGAAATAGGCAAAT+TGG + chr4.4:83817396-83817415 None:intergenic 45.0%
GCTGAAGTACAAGAGGAAAG+TGG - chr4.4:83818240-83818259 MS.gene057828:intron 45.0%
GGGACTGAAAAGCCATCATA+CGG + chr4.4:83818026-83818045 None:intergenic 45.0%
GGTGAATGAGTCTAGTAGCT+TGG - chr4.4:83818456-83818475 MS.gene057828:CDS 45.0%
GTAACAAAGTCCTTGAACCC+CGG + chr4.4:83819223-83819242 None:intergenic 45.0%
GTCCTTGAACACTGTCTCAT+AGG - chr4.4:83817346-83817365 MS.gene057828:intron 45.0%
GTCGCCAATATGCATCATCT+TGG + chr4.4:83819459-83819478 None:intergenic 45.0%
GTCTAGTAGCTTGGAATTGC+CGG - chr4.4:83818465-83818484 MS.gene057828:CDS 45.0%
TATCAATGGCTTCCGTCAAG+CGG - chr4.4:83818931-83818950 MS.gene057828:CDS 45.0%
TCACTTGAAAACGGAACAGC+AGG + chr4.4:83818213-83818232 None:intergenic 45.0%
TCTAGTAGCTTGGAATTGCC+GGG - chr4.4:83818466-83818485 MS.gene057828:CDS 45.0%
TTAAGGTCGGGAATTGCACT+CGG + chr4.4:83818503-83818522 None:intergenic 45.0%
! AAATGCGTGGCATCTAGAAC+CGG - chr4.4:83819201-83819220 MS.gene057828:CDS 45.0%
! ACACGCCACTCTTGTTTCAA+TGG + chr4.4:83817778-83817797 None:intergenic 45.0%
! AGTGCCGGACTAGGTATTTA+AGG + chr4.4:83818520-83818539 None:intergenic 45.0%
! ATTTGCTGCTGATGGGAGTA+TGG - chr4.4:83818314-83818333 MS.gene057828:intron 45.0%
! CCGGACTAGGTATTTAAGGT+CGG + chr4.4:83818516-83818535 None:intergenic 45.0%
! CGGACTAGGTATTTAAGGTC+GGG + chr4.4:83818515-83818534 None:intergenic 45.0%
! TACCTTTTTACGAGCAGTGG+CGG + chr4.4:83819542-83819561 None:intergenic 45.0%
! TCAAGGACAACAGCGTTTTC+TGG + chr4.4:83817334-83817353 None:intergenic 45.0%
! TCAGGTCCATGGTGCATTTT+AGG - chr4.4:83818845-83818864 MS.gene057828:CDS 45.0%
! TGTTTTCATGTAGACCGCAC+AGG - chr4.4:83818626-83818645 MS.gene057828:CDS 45.0%
! TTTGCTGCTGATGGGAGTAT+GGG - chr4.4:83818315-83818334 MS.gene057828:intron 45.0%
!! TGGTGCTATAGGTGAAGATC+AGG - chr4.4:83819390-83819409 MS.gene057828:CDS 45.0%
!!! CCGGGGGTTTAGCTTTATTT+TGG - chr4.4:83818654-83818673 MS.gene057828:CDS 45.0%
!!! CGTTTTCTGGTTCAGACTCA+AGG + chr4.4:83817321-83817340 None:intergenic 45.0%
!!! GAGTTTTGGATTCAGGTCCA+TGG - chr4.4:83817616-83817635 MS.gene057828:CDS 45.0%
AAAGGTCCGGATTGAAGTGC+CGG + chr4.4:83818535-83818554 None:intergenic 50.0%
AAGTCTTGGTACTCCACGTG+CGG - chr4.4:83819012-83819031 MS.gene057828:CDS 50.0%
AATGGCAGGTCCTGATGATC+AGG - chr4.4:83818425-83818444 MS.gene057828:intron 50.0%
AGGGTCTCAACAGTAGCATG+CGG + chr4.4:83819091-83819110 None:intergenic 50.0%
AGGTGAGACCTTCAAGGTTC+AGG + chr4.4:83817273-83817292 None:intergenic 50.0%
AGGTTCGAATGCTTGAGCTC+CGG - chr4.4:83819410-83819429 MS.gene057828:CDS 50.0%
ATAGCCTTCGACTGGAACGT+CGG + chr4.4:83818975-83818994 None:intergenic 50.0%
ATCCGCCACTGCTCGTAAAA+AGG - chr4.4:83819537-83819556 MS.gene057828:CDS 50.0%
CAGACAAGGTGAGACCTTCA+AGG + chr4.4:83817279-83817298 None:intergenic 50.0%
CAGGTCCATGGTTTACCGTT+TGG - chr4.4:83817628-83817647 MS.gene057828:CDS 50.0%
CGTCAAGCGGTTCTTGATTC+AGG - chr4.4:83818944-83818963 MS.gene057828:CDS 50.0%
CTAGACTCATTCACCTAGGC+AGG + chr4.4:83818451-83818470 None:intergenic 50.0%
CTAGTAGCTTGGAATTGCCG+GGG - chr4.4:83818467-83818486 MS.gene057828:CDS 50.0%
GAACGACACCAGGGGAAATA+CGG + chr4.4:83817570-83817589 None:intergenic 50.0%
GAATAGGGTCCTGTAACCAC+CGG + chr4.4:83817999-83818018 None:intergenic 50.0%
GAGACCTTCAAGGTTCAGGT+TGG + chr4.4:83817269-83817288 None:intergenic 50.0%
GCGTTCTTGATGAAGGTCCA+TGG - chr4.4:83817515-83817534 MS.gene057828:CDS 50.0%
GCTGATCTACGACCTCCATT+AGG + chr4.4:83818788-83818807 None:intergenic 50.0%
GGTGAGCTAGTGTCTCACTT+AGG + chr4.4:83818562-83818581 None:intergenic 50.0%
GTTGTACCTGTGGAGGAAGA+GGG + chr4.4:83818147-83818166 None:intergenic 50.0%
TCGAAGGCTATCCGTACACT+TGG - chr4.4:83818984-83819003 MS.gene057828:CDS 50.0%
TGAAGGTCTCACCTTGTCTG+AGG - chr4.4:83817279-83817298 MS.gene057828:intron 50.0%
TGCATGGAAGCCAGGCAAAA+AGG - chr4.4:83817426-83817445 MS.gene057828:CDS 50.0%
TGCTACTAACCGGTGGTTAC+AGG - chr4.4:83817987-83818006 MS.gene057828:intron 50.0%
TGCTACTGTTGAGACCCTTG+TGG - chr4.4:83819093-83819112 MS.gene057828:CDS 50.0%
TGGACCTTCATCAAGAACGC+GGG + chr4.4:83817515-83817534 None:intergenic 50.0%
TGTGATGTAGGCTTGAGGTG+CGG + chr4.4:83817952-83817971 None:intergenic 50.0%
TGTTGTACCTGTGGAGGAAG+AGG + chr4.4:83818148-83818167 None:intergenic 50.0%
TTATCCGACGTTCCAGTCGA+AGG - chr4.4:83818968-83818987 MS.gene057828:CDS 50.0%
TTCATGTGCGGAGGACATGT+GGG - chr4.4:83819291-83819310 MS.gene057828:CDS 50.0%
TTGGAACCGCTGCTACTAAC+CGG - chr4.4:83817977-83817996 MS.gene057828:intron 50.0%
! AATGCGTGGCATCTAGAACC+GGG - chr4.4:83819202-83819221 MS.gene057828:CDS 50.0%
! CTTGGTAATTGGCGCGTTAC+CGG - chr4.4:83818749-83818768 MS.gene057828:CDS 50.0%
! GTAGCGATCAGCAACGGATT+TGG + chr4.4:83817461-83817480 None:intergenic 50.0%
! GTGATCGTGACCTTTTTGCC+TGG + chr4.4:83817439-83817458 None:intergenic 50.0%
! TAACCACCGGTTAGTAGCAG+CGG + chr4.4:83817986-83818005 None:intergenic 50.0%
! TGCTGCCCAAAATGCTGCTT+TGG - chr4.4:83818074-83818093 MS.gene057828:intron 50.0%
! TGGCGTGTTCGTGCTACTAA+TGG - chr4.4:83817790-83817809 MS.gene057828:intron 50.0%
!! ACCTTCAAGGTTCAGGTTGG+TGG + chr4.4:83817266-83817285 None:intergenic 50.0%
!! CCTTCAAGGTTCAGGTTGGT+GGG + chr4.4:83817265-83817284 None:intergenic 50.0%
!! TGATGATGGAGTCCGTAGCT+GGG - chr4.4:83817924-83817943 MS.gene057828:intron 50.0%
!! TGTCACAGGAGTGGACTGTT+GGG - chr4.4:83817859-83817878 MS.gene057828:intron 50.0%
!! TTGTCACAGGAGTGGACTGT+TGG - chr4.4:83817858-83817877 MS.gene057828:intron 50.0%
ACTGGAGGCTGTTGTACCTG+TGG + chr4.4:83818157-83818176 None:intergenic 55.0%
ATGTCTCGTGCATGGAAGCC+AGG - chr4.4:83817418-83817437 MS.gene057828:CDS 55.0%
ATTGGATCTCGCGATCAGCC+AGG + chr4.4:83817378-83817397 None:intergenic 55.0%
CCCACCAACCTGAACCTTGA+AGG - chr4.4:83817262-83817281 MS.gene057828:intron 55.0%
CCTAGTCCGGCACTTCAATC+CGG - chr4.4:83818526-83818545 MS.gene057828:CDS 55.0%
CGTTTAGGAACCTGTAGCCG+AGG + chr4.4:83819166-83819185 None:intergenic 55.0%
CTGTCTCATAGGTCGAGTCC+TGG - chr4.4:83817357-83817376 MS.gene057828:CDS 55.0%
CTTCATGTGCGGAGGACATG+TGG - chr4.4:83819290-83819309 MS.gene057828:CDS 55.0%
GACGAGACCTTCCTCAGACA+AGG + chr4.4:83817293-83817312 None:intergenic 55.0%
GGGTCTCAACAGTAGCATGC+GGG + chr4.4:83819090-83819109 None:intergenic 55.0%
GGTCTCACCTTGTCTGAGGA+AGG - chr4.4:83817283-83817302 MS.gene057828:intron 55.0%
GTAGACCGCACAGGTAGATC+CGG - chr4.4:83818635-83818654 MS.gene057828:CDS 55.0%
GTCATGGACCGTATTTCCCC+TGG - chr4.4:83817559-83817578 MS.gene057828:CDS 55.0%
GTGTACGGATAGCCTTCGAC+TGG + chr4.4:83818983-83819002 None:intergenic 55.0%
TAGACCGCACAGGTAGATCC+GGG - chr4.4:83818636-83818655 MS.gene057828:CDS 55.0%
TTTGCTTCCTGACCGCCCTT+TGG - chr4.4:83818176-83818195 MS.gene057828:intron 55.0%
! ATCGGAAGCAGGTGCCACAA+GGG + chr4.4:83819110-83819129 None:intergenic 55.0%
! ATGCGTGGCATCTAGAACCG+GGG - chr4.4:83819203-83819222 MS.gene057828:CDS 55.0%
! GCATCTAGAACCGGGGTTCA+AGG - chr4.4:83819210-83819229 MS.gene057828:CDS 55.0%
! TGGCGCGTTACCGGCTATTA+TGG - chr4.4:83818758-83818777 MS.gene057828:CDS 55.0%
!! CTGATGATGGAGTCCGTAGC+TGG - chr4.4:83817923-83817942 MS.gene057828:intron 55.0%
!! GACACACGGCTTGGTGCTAT+AGG - chr4.4:83819379-83819398 MS.gene057828:CDS 55.0%
!! GATGATGGAGTCCGTAGCTG+GGG - chr4.4:83817925-83817944 MS.gene057828:intron 55.0%
AACCCCCGGATCTACCTGTG+CGG + chr4.4:83818643-83818662 None:intergenic 60.0%
AGACCGCACAGGTAGATCCG+GGG - chr4.4:83818637-83818656 MS.gene057828:CDS 60.0%
AGGGCGGTCAGGAAGCAAAC+TGG + chr4.4:83818175-83818194 None:intergenic 60.0%
ATCCTCTCTTCCACCGCACG+TGG + chr4.4:83819028-83819047 None:intergenic 60.0%
CACTCGGACTACCTACACCC+CGG + chr4.4:83818487-83818506 None:intergenic 60.0%
CAGGTAGCCCGAGCACCAAA+GGG + chr4.4:83818194-83818213 None:intergenic 60.0%
CCTAGGCAGGCCTGATCATC+AGG + chr4.4:83818438-83818457 None:intergenic 60.0%
CCTGATGATCAGGCCTGCCT+AGG - chr4.4:83818435-83818454 MS.gene057828:CDS 60.0%
CGCGGGCAGCATCAACCTTA+TGG + chr4.4:83817498-83817517 None:intergenic 60.0%
GAACCGCTGCTACTAACCGG+TGG - chr4.4:83817980-83817999 MS.gene057828:intron 60.0%
GAGGTCGTAGATCAGCCGCT+TGG - chr4.4:83818792-83818811 MS.gene057828:CDS 60.0%
GCGAGCGTATGTCTCGTGCA+TGG - chr4.4:83817410-83817429 MS.gene057828:CDS 60.0%
GCGGTCAGGAAGCAAACTGG+AGG + chr4.4:83818172-83818191 None:intergenic 60.0%
GCTGCCCGCGTTCTTGATGA+AGG - chr4.4:83817508-83817527 MS.gene057828:CDS 60.0%
GCTTGGAATTGCCGGGGTGT+AGG - chr4.4:83818473-83818492 MS.gene057828:CDS 60.0%
GGAACCTGTAGCCGAGGTGT+AGG + chr4.4:83819160-83819179 None:intergenic 60.0%
GGAGGCTGTTGTACCTGTGG+AGG + chr4.4:83818154-83818173 None:intergenic 60.0%
TCTTGGTACTCCACGTGCGG+TGG - chr4.4:83819015-83819034 MS.gene057828:CDS 60.0%
TGCACCTACACCTCGGCTAC+AGG - chr4.4:83819153-83819172 MS.gene057828:CDS 60.0%
! GATCGGAAGCAGGTGCCACA+AGG + chr4.4:83819111-83819130 None:intergenic 60.0%
!! CCGGATTGAAGTGCCGGACT+AGG + chr4.4:83818529-83818548 None:intergenic 60.0%
CTCCACGTGCGGTGGAAGAG+AGG - chr4.4:83819023-83819042 MS.gene057828:CDS 65.0%
CTGCTGCCCTCTTCCTCCAC+AGG - chr4.4:83818138-83818157 MS.gene057828:intron 65.0%
GACCGCACAGGTAGATCCGG+GGG - chr4.4:83818638-83818657 MS.gene057828:CDS 65.0%
GCAGGTAGCCCGAGCACCAA+AGG + chr4.4:83818195-83818214 None:intergenic 65.0%
GTAGCCCGAGCACCAAAGGG+CGG + chr4.4:83818191-83818210 None:intergenic 65.0%
GTGCGGAGGACATGTGGGAG+TGG - chr4.4:83819296-83819315 MS.gene057828:CDS 65.0%
TGAGGTGCGGTCCCCAGCTA+CGG + chr4.4:83817939-83817958 None:intergenic 65.0%
!! CCTGACCGCCCTTTGGTGCT+CGG - chr4.4:83818183-83818202 MS.gene057828:intron 65.0%
!! CTGACCGCCCTTTGGTGCTC+GGG - chr4.4:83818184-83818203 MS.gene057828:intron 65.0%
CCGAGCACCAAAGGGCGGTC+AGG + chr4.4:83818186-83818205 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 83817256 83819596 83817256 ID=MS.gene057828
chr4.4 mRNA 83817256 83819596 83817256 ID=MS.gene057828.t1;Parent=MS.gene057828
chr4.4 exon 83818433 83819596 83818433 ID=MS.gene057828.t1.exon1;Parent=MS.gene057828.t1
chr4.4 CDS 83818433 83819596 83818433 ID=cds.MS.gene057828.t1;Parent=MS.gene057828.t1
chr4.4 exon 83817355 83817746 83817355 ID=MS.gene057828.t1.exon2;Parent=MS.gene057828.t1
chr4.4 CDS 83817355 83817746 83817355 ID=cds.MS.gene057828.t1;Parent=MS.gene057828.t1
chr4.4 exon 83817256 83817259 83817256 ID=MS.gene057828.t1.exon3;Parent=MS.gene057828.t1
chr4.4 CDS 83817256 83817259 83817256 ID=cds.MS.gene057828.t1;Parent=MS.gene057828.t1
Gene Sequence

>MS.gene057828

ATGGATCCCACCAACCTGAACCTTGAAGGTCTCACCTTGTCTGAGGAAGGTCTCGTCCTTAACCTTGAGTCTGAACCAGAAAACGCTGTTGTCCTTGAACACTGTCTCATAGGTCGAGTCCTGGCTGATCGCGAGATCCAATTTGCCTATTTCAGCGAGCGTATGTCTCGTGCATGGAAGCCAGGCAAAAAGGTCACGATCACCAAATCCGTTGCTGATCGCTACTTGTTCCAATTTCACCATAAGGTTGATGCTGCCCGCGTTCTTGATGAAGGTCCATGGCTTTATGATAATTTTCATATTGTCATGGACCGTATTTCCCCTGGTGTCGTTCCAAGTTTTGTCCCGTTGAATCATATCGAGTTTTGGATTCAGGTCCATGGTTTACCGTTTGGTTTCATTCAACCTAAGGTAGGTCAAGGTATAGGGAATTTTCTAGGTACCTTCAAATCTTATGATGGTCGTAACACTATTCATAGCTCTTATATGAGACTCAAGGTTGCTATCGACGTCACTGTTCCATTGAAACAAGAGTGGCGTGTTCGTGCTACTAATGGCGAATTTGTTACTGTAACCTTTAAATATGAAAAACTTGGTATTTTTTGTCACAGGAGTGGACTGTTGGGACATACTGACAAGGTGTGTCCAGACTTGTTTGAGCTTGAATCTGATGATGGAGTCCGTAGCTGGGGACCGCACCTCAAGCCTACATCACAAAGAATTGGAACCGCTGCTACTAACCGGTGGTTACAGGACCCTATTCATGACCGTATGATGGCTTTTCAGTCCCAACTCACTGCTATGAAACATGATGTTCTTGCTGCCCAAAATGCTGCTTTGGCTAAAAAAGGTAATGGTTTGATTTCTGCTTGCAAAGTGCATCTGCTGCCCTCTTCCTCCACAGGTACAACAGCCTCCAGTTTGCTTCCTGACCGCCCTTTGGTGCTCGGGCTACCTGCTGTTCCGTTTTCAAGTGAATCCGATGCTGAAGTACAAGAGGAAAGTGGTTCGGATTTGAAGAAAAGGAAGCGTATGCTAGACCGTCAGAATGAAGTATCATTTGCTGCTGATGGGAGTATGGGAAATGTTGTAATAGGATCAAATGTTAGTCATGGGGGGGATGATGATATGTATGTAACTGCTGGTCCTATAGATGATGAACAAGTTGTAATGGCAGGTCCTGATGATCAGGCCTGCCTAGGTGAATGAGTCTAGTAGCTTGGAATTGCCGGGGTGTAGGTAGTCCGAGTGCAATTCCCGACCTTAAATACCTAGTCCGGCACTTCAATCCGGACCTTTTATTCCTAAGTGAGACACTAGCTCACCGAAATAAAATTGAAAAACTCCGTTTTTTGCTTGGTTACGATTCTTGTTTTCATGTAGACCGCACAGGTAGATCCGGGGGTTTAGCTTTATTTTGGAAAGACTCTTTACATTGTCAGCTTGTAAATTTTTCTAACAACCATATTACTGTTGAAATTGTTAACAACACTCTTGGTAATTGGCGCGTTACCGGCTATTATGGCTATCCTAATGGAGGTCGTAGATCAGCCGCTTGGAACTTTCTTCGACAACTGTCTTCTCAATTTTCAGGTCCATGGTGCATTTTAGGAGATTTTAATGATATTTTAGATGCGAGTGAGAAAAGGGGACGAAATTTAAGACCCCAATGGATTATCAATGGCTTCCGTCAAGCGGTTCTTGATTCAGGTTTATCCGACGTTCCAGTCGAAGGCTATCCGTACACTTGGTTTAAAAGTCTTGGTACTCCACGTGCGGTGGAAGAGAGGATTGATCGTGCTCTTGCAAATGATTTATGGTTTAATATTTTCCCGCATGCTACTGTTGAGACCCTTGTGGCACCTGCTTCCGATCATTACCCTATTCTTGTTAATGTTGCACCTACACCTCGGCTACAGGTTCCTAAACGTCATTTTCGCTATGAAAATGCGTGGCATCTAGAACCGGGGTTCAAGGACTTTGTTACTAATTCTTGGCAGGTTTACTCTACAAGTACTCTTCTTCCAAAATTATCTTCATGTGCGGAGGACATGTGGGAGTGGAAGAAAACTCATTGTCACAAATTAAAAAAAGACATTGAAGATTGCCGCAAACAATTACAAGACACACGGCTTGGTGCTATAGGTGAAGATCAGGTTCGAATGCTTGAGCTCCGGAAAAGAATGCAACGTTTATTATCCCAAGATGATGCATATTGGCGACAACGTGCAAAGACTCATTGGTACAAGGATGGTGATCGTAACACAAATTTTTTTCATGCATCCGCCACTGCTCGTAAAAAGGTAAACCGCAAACTTTCTCTTGATGATGAAGCAGGTAA
Protein sequence

>MS.gene057828.t1

MDPTNLNLEGLTLSEEGLVLNLESEPENAVVLEHCLIGRVLADREIQFAYFSERMSRAWKPGKKVTITKSVADRYLFQFHHKVDAARVLDEGPWLYDNFHIVMDRISPGVVPSFVPLNHIEFWIQVHGLPFGFIQPKVGQGIGNFLGTFKSYDGRNTIHSSYMRLKVAIDVTVPLKQEWRVRATNGEFVTVTFKYEKLGIFCHRSGLLGHTDKVCPDLFELESDDGVRSWGPHLKPTSQRIGTAATNRWLQDPIHDRMMAFQSQLTAMKHDVLAAQNAALAKKGNGLISACKVHLLPSSSTGTTASSLLPDRPLVLGLPAVPFSSESDAEVQEESGSDLKKRKRMLDRQNEVSFAADGSMGNVVIGSNVSHGGDDDMYVTAGPIDDEQTLVAPASDHYPILVNVAPTPRLQVPKRHFRYENAWHLEPGFKDFVTNSWQVYSTSTLLPKLSSCAEDMWEWKKTHCHKLKKDIEDCRKQLQDTRLGAIGEDQVRMLELRKRMQRLLSQDDAYWRQRAKTHW