AlfalfaGEDB | MS.gene08606

M. sativa cultivar XinJiangDaYe / MS.gene08606

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene08606.t1	RHN40311.1	62.4	266	97	2	1	266	62	324	2.70E-95	358.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene08606.t1	A0A396GJD3	62.4	266	97	2	1	266	62	324	2.0e-95	358.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene08606	MS.gene015093	PPI
MS.gene048747	MS.gene08606	PPI
MS.gene042559	MS.gene08606	PPI
MS.gene22200	MS.gene08606	PPI
MS.gene071133	MS.gene08606	PPI
MS.gene055546	MS.gene08606	PPI
MS.gene26038	MS.gene08606	PPI
MS.gene85308	MS.gene08606	PPI
MS.gene49057	MS.gene08606	PPI
MS.gene08606	MS.gene000640	PPI
MS.gene073573	MS.gene08606	PPI
MS.gene08606	MS.gene09517	PPI
MS.gene012889	MS.gene08606	PPI
MS.gene031967	MS.gene08606	PPI
MS.gene053373	MS.gene08606	PPI
MS.gene34812	MS.gene08606	PPI
MS.gene02896	MS.gene08606	PPI
MS.gene063214	MS.gene08606	PPI
MS.gene55682	MS.gene08606	PPI
MS.gene97410	MS.gene08606	PPI
MS.gene32415	MS.gene08606	PPI
MS.gene08606	MS.gene62249	PPI
MS.gene035626	MS.gene08606	PPI
MS.gene067340	MS.gene08606	PPI
MS.gene65623	MS.gene08606	PPI
MS.gene71675	MS.gene08606	PPI
MS.gene019177	MS.gene08606	PPI
MS.gene69495	MS.gene08606	PPI
MS.gene049512	MS.gene08606	PPI
MS.gene038623	MS.gene08606	PPI
MS.gene05357	MS.gene08606	PPI
MS.gene08606	MS.gene60390	PPI
MS.gene032311	MS.gene08606	PPI
MS.gene004417	MS.gene08606	PPI
MS.gene86849	MS.gene08606	PPI
MS.gene50392	MS.gene08606	PPI
MS.gene37955	MS.gene08606	PPI
MS.gene072852	MS.gene08606	PPI
MS.gene41393	MS.gene08606	PPI
MS.gene39956	MS.gene08606	PPI
MS.gene021968	MS.gene08606	PPI
MS.gene09589	MS.gene08606	PPI
MS.gene44144	MS.gene08606	PPI
MS.gene43393	MS.gene08606	PPI
MS.gene08606	MS.gene025158	PPI
MS.gene057828	MS.gene08606	PPI
MS.gene34197	MS.gene08606	PPI
MS.gene66650	MS.gene08606	PPI
MS.gene005120	MS.gene08606	PPI
MS.gene86868	MS.gene08606	PPI
MS.gene048072	MS.gene08606	PPI
MS.gene060386	MS.gene08606	PPI
MS.gene71588	MS.gene08606	PPI
MS.gene04749	MS.gene08606	PPI
MS.gene08606	MS.gene025987	PPI
MS.gene05436	MS.gene08606	PPI
MS.gene08606	MS.gene043140	PPI
MS.gene059736	MS.gene08606	PPI
MS.gene70932	MS.gene08606	PPI
MS.gene35175	MS.gene08606	PPI
MS.gene08606	MS.gene03149	PPI
MS.gene62249	MS.gene08606	PPI
MS.gene81194	MS.gene08606	PPI
MS.gene025675	MS.gene08606	PPI
MS.gene069786	MS.gene08606	PPI
MS.gene021965	MS.gene08606	PPI
MS.gene055683	MS.gene08606	PPI
MS.gene042614	MS.gene08606	PPI
MS.gene41643	MS.gene08606	PPI
MS.gene013890	MS.gene08606	PPI
MS.gene26844	MS.gene08606	PPI
MS.gene021555	MS.gene08606	PPI
MS.gene060773	MS.gene08606	PPI
MS.gene021647	MS.gene08606	PPI
MS.gene69584	MS.gene08606	PPI
MS.gene08606	MS.gene24278	PPI
MS.gene08606	MS.gene000379	PPI
MS.gene019165	MS.gene08606	PPI
MS.gene048706	MS.gene08606	PPI
MS.gene08606	MS.gene59460	PPI
MS.gene009121	MS.gene08606	PPI
MS.gene94654	MS.gene08606	PPI
MS.gene024841	MS.gene08606	PPI
MS.gene51804	MS.gene08606	PPI
MS.gene87845	MS.gene08606	PPI
MS.gene36069	MS.gene08606	PPI
MS.gene83772	MS.gene08606	PPI
MS.gene009213	MS.gene08606	PPI
MS.gene060788	MS.gene08606	PPI
MS.gene008927	MS.gene08606	PPI
MS.gene045614	MS.gene08606	PPI
MS.gene96541	MS.gene08606	PPI
MS.gene049561	MS.gene08606	PPI
MS.gene000634	MS.gene08606	PPI
MS.gene009781	MS.gene08606	PPI
MS.gene63762	MS.gene08606	PPI
MS.gene27329	MS.gene08606	PPI
MS.gene08606	MS.gene44144	PPI
MS.gene30208	MS.gene08606	PPI
MS.gene028716	MS.gene08606	PPI
MS.gene21066	MS.gene08606	PPI
MS.gene025873	MS.gene08606	PPI
MS.gene06164	MS.gene08606	PPI
MS.gene013676	MS.gene08606	PPI
MS.gene55209	MS.gene08606	PPI
MS.gene05358	MS.gene08606	PPI
MS.gene64178	MS.gene08606	PPI
MS.gene030090	MS.gene08606	PPI
MS.gene95561	MS.gene08606	PPI
MS.gene96174	MS.gene08606	PPI
MS.gene018196	MS.gene08606	PPI
MS.gene065627	MS.gene08606	PPI
MS.gene57019	MS.gene08606	PPI
MS.gene010890	MS.gene08606	PPI
MS.gene018745	MS.gene08606	PPI
MS.gene65546	MS.gene08606	PPI
MS.gene09023	MS.gene08606	PPI
MS.gene000506	MS.gene08606	PPI
MS.gene74639	MS.gene08606	PPI
MS.gene032299	MS.gene08606	PPI
MS.gene03936	MS.gene08606	PPI
MS.gene038098	MS.gene08606	PPI
MS.gene60059	MS.gene08606	PPI
MS.gene062511	MS.gene08606	PPI
MS.gene22111	MS.gene08606	PPI
MS.gene28545	MS.gene08606	PPI
MS.gene28718	MS.gene08606	PPI
MS.gene055560	MS.gene08606	PPI
MS.gene008275	MS.gene08606	PPI
MS.gene29321	MS.gene08606	PPI
MS.gene34618	MS.gene08606	PPI
MS.gene59460	MS.gene08606	PPI
MS.gene038757	MS.gene08606	PPI
MS.gene064966	MS.gene08606	PPI
MS.gene08606	MS.gene018474	PPI
MS.gene08606	MS.gene86868	PPI
MS.gene069624	MS.gene08606	PPI
MS.gene016632	MS.gene08606	PPI
MS.gene002590	MS.gene08606	PPI
MS.gene025987	MS.gene08606	PPI
MS.gene000640	MS.gene08606	PPI
MS.gene40828	MS.gene08606	PPI
MS.gene43924	MS.gene08606	PPI
MS.gene046089	MS.gene08606	PPI
MS.gene047954	MS.gene08606	PPI
MS.gene77990	MS.gene08606	PPI
MS.gene036423	MS.gene08606	PPI
MS.gene054652	MS.gene08606	PPI
MS.gene013644	MS.gene08606	PPI
MS.gene84790	MS.gene08606	PPI
MS.gene72520	MS.gene08606	PPI
MS.gene61651	MS.gene08606	PPI
MS.gene08606	MS.gene61499	PPI
MS.gene66651	MS.gene08606	PPI
MS.gene96109	MS.gene08606	PPI
MS.gene35202	MS.gene08606	PPI
MS.gene025158	MS.gene08606	PPI
MS.gene051449	MS.gene08606	PPI
MS.gene015093	MS.gene08606	PPI
MS.gene007022	MS.gene08606	PPI
MS.gene61499	MS.gene08606	PPI
MS.gene019001	MS.gene08606	PPI
MS.gene63743	MS.gene08606	PPI
MS.gene48477	MS.gene08606	PPI
MS.gene045875	MS.gene08606	PPI
MS.gene038394	MS.gene08606	PPI
MS.gene30136	MS.gene08606	PPI
MS.gene95960	MS.gene08606	PPI
MS.gene008861	MS.gene08606	PPI
MS.gene61452	MS.gene08606	PPI
MS.gene73261	MS.gene08606	PPI
MS.gene024297	MS.gene08606	PPI
MS.gene83979	MS.gene08606	PPI
MS.gene016102	MS.gene08606	PPI
MS.gene46941	MS.gene08606	PPI
MS.gene45083	MS.gene08606	PPI
MS.gene92517	MS.gene08606	PPI
MS.gene85295	MS.gene08606	PPI
MS.gene057934	MS.gene08606	PPI
MS.gene60390	MS.gene08606	PPI
MS.gene47792	MS.gene08606	PPI
MS.gene46948	MS.gene08606	PPI
MS.gene98471	MS.gene08606	PPI
MS.gene012019	MS.gene08606	PPI
MS.gene08606	MS.gene022929	PPI
MS.gene025401	MS.gene08606	PPI
MS.gene93396	MS.gene08606	PPI
MS.gene074257	MS.gene08606	PPI
MS.gene05231	MS.gene08606	PPI
MS.gene08606	MS.gene048342	PPI
MS.gene010656	MS.gene08606	PPI
MS.gene000629	MS.gene08606	PPI
MS.gene059269	MS.gene08606	PPI
MS.gene40469	MS.gene08606	PPI
MS.gene041264	MS.gene08606	PPI
MS.gene41979	MS.gene08606	PPI
MS.gene08606	MS.gene21066	PPI
MS.gene024522	MS.gene08606	PPI
MS.gene64130	MS.gene08606	PPI
MS.gene05319	MS.gene08606	PPI
MS.gene88393	MS.gene08606	PPI
MS.gene56991	MS.gene08606	PPI
MS.gene050679	MS.gene08606	PPI
MS.gene85538	MS.gene08606	PPI
MS.gene20246	MS.gene08606	PPI
MS.gene055223	MS.gene08606	PPI
MS.gene010290	MS.gene08606	PPI
MS.gene08606	MS.gene008658	PPI
MS.gene053747	MS.gene08606	PPI
MS.gene65471	MS.gene08606	PPI
MS.gene061850	MS.gene08606	PPI
MS.gene26433	MS.gene08606	PPI
MS.gene34463	MS.gene08606	PPI
MS.gene048088	MS.gene08606	PPI
MS.gene008658	MS.gene08606	PPI
MS.gene018474	MS.gene08606	PPI
MS.gene22730	MS.gene08606	PPI
MS.gene003264	MS.gene08606	PPI
MS.gene073582	MS.gene08606	PPI
MS.gene058889	MS.gene08606	PPI
MS.gene98616	MS.gene08606	PPI
MS.gene53904	MS.gene08606	PPI
MS.gene08708	MS.gene08606	PPI
MS.gene09517	MS.gene08606	PPI
MS.gene69586	MS.gene08606	PPI
MS.gene042027	MS.gene08606	PPI
MS.gene69490	MS.gene08606	PPI
MS.gene043140	MS.gene08606	PPI
MS.gene015248	MS.gene08606	PPI
MS.gene80362	MS.gene08606	PPI
MS.gene44083	MS.gene08606	PPI
MS.gene37537	MS.gene08606	PPI
MS.gene013193	MS.gene08606	PPI
MS.gene04970	MS.gene08606	PPI
MS.gene08606	MS.gene74639	PPI
MS.gene08606	MS.gene071133	PPI
MS.gene08106	MS.gene08606	PPI
MS.gene24278	MS.gene08606	PPI
MS.gene51799	MS.gene08606	PPI
MS.gene58419	MS.gene08606	PPI
MS.gene027994	MS.gene08606	PPI
MS.gene068629	MS.gene08606	PPI
MS.gene96163	MS.gene08606	PPI
MS.gene08606	MS.gene37955	PPI
MS.gene08713	MS.gene08606	PPI
MS.gene65474	MS.gene08606	PPI
MS.gene23521	MS.gene08606	PPI
MS.gene63150	MS.gene08606	PPI
MS.gene08606	MS.gene84790	PPI
MS.gene29406	MS.gene08606	PPI
MS.gene54051	MS.gene08606	PPI
MS.gene86275	MS.gene08606	PPI
MS.gene98127	MS.gene08606	PPI
MS.gene03149	MS.gene08606	PPI
MS.gene87529	MS.gene08606	PPI
MS.gene024405	MS.gene08606	PPI
MS.gene012748	MS.gene08606	PPI
MS.gene04134	MS.gene08606	PPI
MS.gene062067	MS.gene08606	PPI
MS.gene57044	MS.gene08606	PPI
MS.gene054508	MS.gene08606	PPI
MS.gene89815	MS.gene08606	PPI
MS.gene028714	MS.gene08606	PPI
MS.gene049610	MS.gene08606	PPI
MS.gene017586	MS.gene08606	PPI
MS.gene08606	MS.gene027994	PPI
MS.gene038676	MS.gene08606	PPI
MS.gene060718	MS.gene08606	PPI
MS.gene98756	MS.gene08606	PPI
MS.gene08606	MS.gene007022	PPI
MS.gene71637	MS.gene08606	PPI
MS.gene042651	MS.gene08606	PPI
MS.gene05576	MS.gene08606	PPI
MS.gene52349	MS.gene08606	PPI
MS.gene98467	MS.gene08606	PPI
MS.gene46353	MS.gene08606	PPI
MS.gene42010	MS.gene08606	PPI
MS.gene037049	MS.gene08606	PPI
MS.gene034643	MS.gene08606	PPI
MS.gene044729	MS.gene08606	PPI
MS.gene037634	MS.gene08606	PPI
MS.gene08606	MS.gene61651	PPI
MS.gene000379	MS.gene08606	PPI
MS.gene048342	MS.gene08606	PPI
MS.gene24070	MS.gene08606	PPI
MS.gene60266	MS.gene08606	PPI
MS.gene08606	MS.gene88393	PPI
MS.gene016719	MS.gene08606	PPI
MS.gene071784	MS.gene08606	PPI
MS.gene027169	MS.gene08606	PPI
MS.gene061579	MS.gene08606	PPI
MS.gene039692	MS.gene08606	PPI
MS.gene76420	MS.gene08606	PPI
MS.gene071320	MS.gene08606	PPI
MS.gene022929	MS.gene08606	PPI
MS.gene42903	MS.gene08606	PPI
MS.gene81712	MS.gene08606	PPI
MS.gene026680	MS.gene08606	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene08606.t1	MTR_6g033215	80.412	194	38	0	2	195	102	295	2.29e-117	339
MS.gene08606.t1	MTR_6g053790	54.730	148	44	2	131	277	35	160	3.33e-45	155
MS.gene08606.t1	MTR_0010s0370	33.766	154	102	0	19	172	24	177	4.11e-28	107
MS.gene08606.t1	MTR_0010s0350	33.766	154	102	0	19	172	24	177	4.11e-28	107
MS.gene08606.t1	MTR_6g053230	29.189	185	92	2	1	182	22	170	3.94e-26	107
MS.gene08606.t1	MTR_8g468010	58.730	63	26	0	110	172	1	63	8.82e-26	99.8
MS.gene08606.t1	MTR_1g032270	48.718	78	39	1	93	169	1	78	3.77e-21	87.8
MS.gene08606.t1	MTR_4g075740	40.714	140	63	4	2	140	22	142	3.82e-21	88.2
MS.gene08606.t1	MTR_3g024240	36.364	121	75	1	76	194	54	174	4.13e-21	88.6
MS.gene08606.t1	MTR_4g020545	28.986	207	93	6	57	263	80	232	6.92e-20	87.8
MS.gene08606.t1	MTR_3g053920	32.692	104	70	0	22	125	29	132	5.51e-19	85.1
MS.gene08606.t1	MTR_2g061500	31.683	101	69	0	22	122	29	129	3.02e-16	74.3
MS.gene08606.t1	MTR_3g041640	64.286	42	15	0	110	151	1	42	4.89e-14	68.6
MS.gene08606.t1	MTR_7g011710	32.099	81	55	0	52	132	5	85	9.10e-13	65.1
MS.gene08606.t1	MTR_4g103530	31.461	89	61	0	52	140	5	93	1.91e-12	65.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene08606.t1	AT2G01050	24.590	183	132	3	28	210	80	256	1.47e-14	73.9
MS.gene08606.t1	AT3G31430	25.907	193	137	2	27	219	132	318	2.04e-14	72.8
MS.gene08606.t1	AT2G17920	25.000	144	104	2	67	210	79	218	4.49e-13	68.6
MS.gene08606.t1	AT5G18636	25.000	136	96	3	77	210	87	218	9.37e-12	65.1
MS.gene08606.t1	AT5G25200	25.000	136	96	3	77	210	87	218	9.63e-12	65.1
MS.gene08606.t1	AT2G02103	25.000	136	96	3	77	210	87	218	1.62e-11	64.7

Find 94 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAACATTGATTCATAATTAT+TGG	0.151849	4.1:-38787343	None:intergenic
CCAACTGCCCTTTGGTTTGA+TGG	0.236183	4.1:+38786903	MS.gene08606:CDS
ATGAGAGTCATGCGATATTT+TGG	0.240965	4.1:-38786703	None:intergenic
CTCCAATCTCGACCTTCTTC+AGG	0.277767	4.1:-38786828	None:intergenic
CTTAGTCCAACTTTATTCTA+AGG	0.290141	4.1:+38786747	MS.gene08606:CDS
GGCGGAGGTTTATGCGAATC+AGG	0.331581	4.1:+38787004	MS.gene08606:CDS
CCATGGACACCACTGAAATC+TGG	0.345378	4.1:+38786869	MS.gene08606:CDS
TAAGAATTTGTTACCTTCCA+TGG	0.372575	4.1:-38786728	None:intergenic
TTTGACGAGGACAACAACTA+TGG	0.380770	4.1:+38786976	MS.gene08606:CDS
TTCCCATATGGGGCCAAGTC+TGG	0.388607	4.1:-38786680	None:intergenic
TATGAATCAATGTTAATTGA+TGG	0.400948	4.1:+38787351	MS.gene08606:CDS
GCGAGAGCAGCAAGAAGAAA+TGG	0.402237	4.1:+38787196	MS.gene08606:CDS
AGACCAGACTTGGCCCCATA+TGG	0.408994	4.1:+38786677	MS.gene08606:CDS
GGTGAACAAGCCGATTCATT+TGG	0.413532	4.1:+38786645	MS.gene08606:CDS
CTGGTCATTGAGAGGGAAGA+AGG	0.420922	4.1:+38787063	MS.gene08606:CDS
CAGATTCACCAACTGCCCTT+TGG	0.422119	4.1:+38786895	MS.gene08606:CDS
TCTCACTCAAGCTGAGCTGC+TGG	0.441593	4.1:+38786597	MS.gene08606:CDS
CTGCTGGACCTGTGTCTTGT+GGG	0.444532	4.1:+38786613	MS.gene08606:CDS
CGAGAGCAGCAAGAAGAAAT+GGG	0.444678	4.1:+38787197	MS.gene08606:CDS
ATAACAAGGAGGCGAATAGA+TGG	0.444680	4.1:+38787259	MS.gene08606:CDS
GATCTGCCTTAGAATAAAGT+TGG	0.446887	4.1:-38786753	None:intergenic
ATTCTAAGGCAGATCTGAAA+AGG	0.451554	4.1:+38786761	MS.gene08606:CDS
ATCCTGAAGAAGGTCGAGAT+TGG	0.457061	4.1:+38786826	MS.gene08606:CDS
TCCGGTGATCGGAGGGATGA+GGG	0.460922	4.1:+38787306	MS.gene08606:CDS
GCTACTCTTGAGACCAGACT+TGG	0.462232	4.1:+38786667	MS.gene08606:CDS
AGCTCAGCTTGAGTGAGATT+CGG	0.469221	4.1:-38786592	None:intergenic
GAGAAGGTTGGAGCTCTTGT+TGG	0.472812	4.1:+38786928	MS.gene08606:CDS
CATGGACACCACTGAAATCT+GGG	0.475827	4.1:+38786870	MS.gene08606:CDS
GGATTCTTGAACGCAGTCCT+TGG	0.477432	4.1:+38786782	MS.gene08606:CDS
CCCCTCATCCCTCCGATCAC+CGG	0.487093	4.1:-38787307	None:intergenic
ATGACCAGCTCTTGTTGTAA+TGG	0.489258	4.1:-38787048	None:intergenic
CCAGATTTCAGTGGTGTCCA+TGG	0.495976	4.1:-38786869	None:intergenic
GAGGCGAATAGATGGATCAT+AGG	0.496078	4.1:+38787267	MS.gene08606:CDS
GCTGCTGGACCTGTGTCTTG+TGG	0.502634	4.1:+38786612	MS.gene08606:CDS
TTCCGGTGATCGGAGGGATG+AGG	0.508644	4.1:+38787305	MS.gene08606:CDS
AAGAATTTGTTACCTTCCAT+GGG	0.513146	4.1:-38786727	None:intergenic
CTTTGGTTTGATGGATGAGA+AGG	0.514797	4.1:+38786912	MS.gene08606:CDS
GGCGGCCGGAGTAATAATTC+CGG	0.518409	4.1:+38787288	MS.gene08606:CDS
TTGAATCTTAACGCTGATCA+TGG	0.519220	4.1:+38786553	MS.gene08606:CDS
AACAAGAGCTGGTCATTGAG+AGG	0.523901	4.1:+38787055	MS.gene08606:CDS
TCAAGAGTAGCCAAATGAAT+CGG	0.535101	4.1:-38786655	None:intergenic
TGGTCATTGAGAGGGAAGAA+GGG	0.536400	4.1:+38787064	MS.gene08606:CDS
TAATATGATCATCCTGAAGA+AGG	0.539277	4.1:+38786816	MS.gene08606:CDS
TTGTTCTCCGCCTTGAGGAA+AGG	0.539787	4.1:-38787222	None:intergenic
TTCTCATCCATCAAACCAAA+GGG	0.542447	4.1:-38786910	None:intergenic
ACAACTATGGGCCATGGCGG+AGG	0.544452	4.1:+38786989	MS.gene08606:CDS
TGCGGTGACAAGTTTGAAGA+GGG	0.546607	4.1:+38787171	MS.gene08606:CDS
GCGAATCAGGGTGGAAGTTG+CGG	0.548793	4.1:+38787017	MS.gene08606:CDS
CTGCGGTGACAAGTTTGAAG+AGG	0.550926	4.1:+38787170	MS.gene08606:CDS
GCTCTTGTTGGTACGCATGT+GGG	0.557435	4.1:+38786940	MS.gene08606:CDS
CTCTTGTTGGTACGCATGTG+GGG	0.558951	4.1:+38786941	MS.gene08606:CDS
CCATCAAACCAAAGGGCAGT+TGG	0.559436	4.1:-38786903	None:intergenic
GCGTCCATATAATCTGTGAC+TGG	0.559615	4.1:-38787384	None:intergenic
GTAATAATTCCGGTGATCGG+AGG	0.560211	4.1:+38787298	MS.gene08606:CDS
AGCTCTTGTTGGTACGCATG+TGG	0.563158	4.1:+38786939	MS.gene08606:CDS
GTGTCTTGTGGGTCGTGTTG+TGG	0.567597	4.1:+38786624	MS.gene08606:CDS
CTGAATTGTTCTCCGCCTTG+AGG	0.571520	4.1:-38787227	None:intergenic
GGTTTGATGGATGAGAAGGT+TGG	0.572484	4.1:+38786916	MS.gene08606:CDS
TAATAATTCCGGTGATCGGA+GGG	0.577656	4.1:+38787299	MS.gene08606:CDS
GACCAGACTTGGCCCCATAT+GGG	0.577997	4.1:+38786678	MS.gene08606:CDS
TTCAGTGGGTGGCAATAACA+AGG	0.582915	4.1:+38787245	MS.gene08606:CDS
TCAGCCATTACAACAAGAGC+TGG	0.583383	4.1:+38787044	MS.gene08606:CDS
AGAGCCGCTAACAAAATCCA+TGG	0.589500	4.1:+38786852	MS.gene08606:CDS
CAACACGACCCACAAGACAC+AGG	0.589564	4.1:-38786621	None:intergenic
ACAAGAGCTGGTCATTGAGA+GGG	0.590497	4.1:+38787056	MS.gene08606:CDS
CCGGTGATCGGAGGGATGAG+GGG	0.591100	4.1:+38787307	MS.gene08606:CDS
TCGCATGACTCTCATTCCCA+TGG	0.591516	4.1:+38786711	MS.gene08606:CDS
CTTCTCATCCATCAAACCAA+AGG	0.597380	4.1:-38786911	None:intergenic
GGAGTAATAATTCCGGTGAT+CGG	0.600030	4.1:+38787295	MS.gene08606:CDS
ATGACTCTCATTCCCATGGA+AGG	0.602280	4.1:+38786715	MS.gene08606:CDS
ACTATCAAATATGAGAAGCT+CGG	0.604190	4.1:+38787102	MS.gene08606:CDS
ATAGATGGATCATAGGCGGC+CGG	0.605574	4.1:+38787274	MS.gene08606:CDS
TTGACGAGGACAACAACTAT+GGG	0.612941	4.1:+38786977	MS.gene08606:CDS
GCGGAGGTTTATGCGAATCA+GGG	0.618839	4.1:+38787005	MS.gene08606:CDS
AGGACAACAACTATGGGCCA+TGG	0.625182	4.1:+38786983	MS.gene08606:CDS
ATATTATTGTCTAGCAACCA+AGG	0.632535	4.1:-38786799	None:intergenic
GGTCATTGAGAGGGAAGAAG+GGG	0.637078	4.1:+38787065	MS.gene08606:CDS
GGTGACAAGTTTGAAGAGGG+TGG	0.639777	4.1:+38787174	MS.gene08606:CDS
GCGGAGAACAATTCAGTGGG+TGG	0.645235	4.1:+38787234	MS.gene08606:CDS
GAAATGGGGTCCTTTCCTCA+AGG	0.649606	4.1:+38787212	MS.gene08606:CDS
AAGGCGGAGAACAATTCAGT+GGG	0.653206	4.1:+38787231	MS.gene08606:CDS
GATCACCGGAATTATTACTC+CGG	0.657948	4.1:-38787293	None:intergenic
CAAGGCGGAGAACAATTCAG+TGG	0.658129	4.1:+38787230	MS.gene08606:CDS
ATTCGCATAAACCTCCGCCA+TGG	0.672714	4.1:-38787000	None:intergenic
AATCTGTGCCCAGATTTCAG+TGG	0.674515	4.1:-38786878	None:intergenic
GGTCACTCTGAAAGTTTCTG+CGG	0.675236	4.1:+38787153	MS.gene08606:CDS
GAGAGCAGCAAGAAGAAATG+GGG	0.687018	4.1:+38787198	MS.gene08606:CDS
GAGGTTTATGCGAATCAGGG+TGG	0.688788	4.1:+38787008	MS.gene08606:CDS
GCGAATAGATGGATCATAGG+CGG	0.694958	4.1:+38787270	MS.gene08606:CDS
GAAGATGATCAAGTTTGACG+AGG	0.710658	4.1:+38786963	MS.gene08606:CDS
ACAACAACTATGGGCCATGG+CGG	0.721505	4.1:+38786986	MS.gene08606:CDS
ATGGGGTCCTTTCCTCAAGG+CGG	0.727413	4.1:+38787215	MS.gene08606:CDS
TCAATGTTAATTGATGGCTG+CGG	0.738137	4.1:+38787357	MS.gene08606:CDS
AGTGGGTGGCAATAACAAGG+AGG	0.756186	4.1:+38787248	MS.gene08606:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TAACATTGATTCATAATTAT+TGG	-	chr4.1:38787346-38787365	None:intergenic	15.0%
!!	TATGAATCAATGTTAATTGA+TGG	+	chr4.1:38787351-38787370	MS.gene08606:CDS	20.0%
	ACTATCAAATATGAGAAGCT+CGG	+	chr4.1:38787102-38787121	MS.gene08606:CDS	30.0%
	ATATTATTGTCTAGCAACCA+AGG	-	chr4.1:38786802-38786821	None:intergenic	30.0%
	CTTAGTCCAACTTTATTCTA+AGG	+	chr4.1:38786747-38786766	MS.gene08606:CDS	30.0%
	TAATATGATCATCCTGAAGA+AGG	+	chr4.1:38786816-38786835	MS.gene08606:CDS	30.0%
!	TTTTCCAGTCACAGATTATA+TGG	+	chr4.1:38787380-38787399	MS.gene08606:CDS	30.0%
!!	AAGAATTTGTTACCTTCCAT+GGG	-	chr4.1:38786730-38786749	None:intergenic	30.0%
!!	TAAGAATTTGTTACCTTCCA+TGG	-	chr4.1:38786731-38786750	None:intergenic	30.0%
!!!	GGTAAGTTTTGTTTTGTTTG+TGG	+	chr4.1:38787123-38787142	MS.gene08606:CDS	30.0%
!!!	TGTTTTGTTTGTGGCATAAT+AGG	+	chr4.1:38787132-38787151	MS.gene08606:CDS	30.0%
	GATCTGCCTTAGAATAAAGT+TGG	-	chr4.1:38786756-38786775	None:intergenic	35.0%
	TCAAGAGTAGCCAAATGAAT+CGG	-	chr4.1:38786658-38786677	None:intergenic	35.0%
	TTCTCATCCATCAAACCAAA+GGG	-	chr4.1:38786913-38786932	None:intergenic	35.0%
	TTGAATCTTAACGCTGATCA+TGG	+	chr4.1:38786553-38786572	MS.gene08606:CDS	35.0%
!	ATGAGAGTCATGCGATATTT+TGG	-	chr4.1:38786706-38786725	None:intergenic	35.0%
!	TCAATGTTAATTGATGGCTG+CGG	+	chr4.1:38787357-38787376	MS.gene08606:CDS	35.0%
!!	ATTCTAAGGCAGATCTGAAA+AGG	+	chr4.1:38786761-38786780	MS.gene08606:CDS	35.0%
!!!	CGATATTTTGGTTCCCATAT+GGG	-	chr4.1:38786694-38786713	None:intergenic	35.0%
!!!	GATATTTTGGTTCCCATATG+GGG	-	chr4.1:38786693-38786712	None:intergenic	35.0%
	ATAACAAGGAGGCGAATAGA+TGG	+	chr4.1:38787259-38787278	MS.gene08606:CDS	40.0%
	CTTCTCATCCATCAAACCAA+AGG	-	chr4.1:38786914-38786933	None:intergenic	40.0%
	GAAGATGATCAAGTTTGACG+AGG	+	chr4.1:38786963-38786982	MS.gene08606:CDS	40.0%
	GATCACCGGAATTATTACTC+CGG	-	chr4.1:38787296-38787315	None:intergenic	40.0%
	GGAGTAATAATTCCGGTGAT+CGG	+	chr4.1:38787295-38787314	MS.gene08606:CDS	40.0%
	TAATAATTCCGGTGATCGGA+GGG	+	chr4.1:38787299-38787318	MS.gene08606:CDS	40.0%
	TTGACGAGGACAACAACTAT+GGG	+	chr4.1:38786977-38786996	MS.gene08606:CDS	40.0%
	TTTGACGAGGACAACAACTA+TGG	+	chr4.1:38786976-38786995	MS.gene08606:CDS	40.0%
!	ATGACCAGCTCTTGTTGTAA+TGG	-	chr4.1:38787051-38787070	None:intergenic	40.0%
!	GTGTCCATGGATTTTGTTAG+CGG	-	chr4.1:38786859-38786878	None:intergenic	40.0%
!!	CTTTGGTTTGATGGATGAGA+AGG	+	chr4.1:38786912-38786931	MS.gene08606:CDS	40.0%
!!!	GCGATATTTTGGTTCCCATA+TGG	-	chr4.1:38786695-38786714	None:intergenic	40.0%
	AACAAGAGCTGGTCATTGAG+AGG	+	chr4.1:38787055-38787074	MS.gene08606:CDS	45.0%
	AAGGCGGAGAACAATTCAGT+GGG	+	chr4.1:38787231-38787250	MS.gene08606:CDS	45.0%
	AATCTGTGCCCAGATTTCAG+TGG	-	chr4.1:38786881-38786900	None:intergenic	45.0%
	ACAAGAGCTGGTCATTGAGA+GGG	+	chr4.1:38787056-38787075	MS.gene08606:CDS	45.0%
	AGAGCCGCTAACAAAATCCA+TGG	+	chr4.1:38786852-38786871	MS.gene08606:CDS	45.0%
	AGCTCAGCTTGAGTGAGATT+CGG	-	chr4.1:38786595-38786614	None:intergenic	45.0%
	ATCCTGAAGAAGGTCGAGAT+TGG	+	chr4.1:38786826-38786845	MS.gene08606:CDS	45.0%
	ATGACTCTCATTCCCATGGA+AGG	+	chr4.1:38786715-38786734	MS.gene08606:CDS	45.0%
	CATGGACACCACTGAAATCT+GGG	+	chr4.1:38786870-38786889	MS.gene08606:CDS	45.0%
	CGAGAGCAGCAAGAAGAAAT+GGG	+	chr4.1:38787197-38787216	MS.gene08606:CDS	45.0%
	GAGAGCAGCAAGAAGAAATG+GGG	+	chr4.1:38787198-38787217	MS.gene08606:CDS	45.0%
	GAGGCGAATAGATGGATCAT+AGG	+	chr4.1:38787267-38787286	MS.gene08606:CDS	45.0%
	GCGAATAGATGGATCATAGG+CGG	+	chr4.1:38787270-38787289	MS.gene08606:CDS	45.0%
	GCGTCCATATAATCTGTGAC+TGG	-	chr4.1:38787387-38787406	None:intergenic	45.0%
	GTAATAATTCCGGTGATCGG+AGG	+	chr4.1:38787298-38787317	MS.gene08606:CDS	45.0%
	TCAGCCATTACAACAAGAGC+TGG	+	chr4.1:38787044-38787063	MS.gene08606:CDS	45.0%
	TGCGGTGACAAGTTTGAAGA+GGG	+	chr4.1:38787171-38787190	MS.gene08606:CDS	45.0%
	TGGTCATTGAGAGGGAAGAA+GGG	+	chr4.1:38787064-38787083	MS.gene08606:CDS	45.0%
	TTCAGTGGGTGGCAATAACA+AGG	+	chr4.1:38787245-38787264	MS.gene08606:CDS	45.0%
!	GGTCACTCTGAAAGTTTCTG+CGG	+	chr4.1:38787153-38787172	MS.gene08606:CDS	45.0%
!	GGTGAACAAGCCGATTCATT+TGG	+	chr4.1:38786645-38786664	MS.gene08606:CDS	45.0%
!	GGTTTGATGGATGAGAAGGT+TGG	+	chr4.1:38786916-38786935	MS.gene08606:CDS	45.0%
	ACAACAACTATGGGCCATGG+CGG	+	chr4.1:38786986-38787005	MS.gene08606:CDS	50.0%
	AGCTCTTGTTGGTACGCATG+TGG	+	chr4.1:38786939-38786958	MS.gene08606:CDS	50.0%
	AGGACAACAACTATGGGCCA+TGG	+	chr4.1:38786983-38787002	MS.gene08606:CDS	50.0%
	AGTGGGTGGCAATAACAAGG+AGG	+	chr4.1:38787248-38787267	MS.gene08606:CDS	50.0%
	ATAGATGGATCATAGGCGGC+CGG	+	chr4.1:38787274-38787293	MS.gene08606:CDS	50.0%
	ATTCGCATAAACCTCCGCCA+TGG	-	chr4.1:38787003-38787022	None:intergenic	50.0%
	CAAGGCGGAGAACAATTCAG+TGG	+	chr4.1:38787230-38787249	MS.gene08606:CDS	50.0%
	CAGATTCACCAACTGCCCTT+TGG	+	chr4.1:38786895-38786914	MS.gene08606:CDS	50.0%
	CCAGATTTCAGTGGTGTCCA+TGG	-	chr4.1:38786872-38786891	None:intergenic	50.0%
	CCATCAAACCAAAGGGCAGT+TGG	-	chr4.1:38786906-38786925	None:intergenic	50.0%
	CCATGGACACCACTGAAATC+TGG	+	chr4.1:38786869-38786888	MS.gene08606:CDS	50.0%
	CTCCAATCTCGACCTTCTTC+AGG	-	chr4.1:38786831-38786850	None:intergenic	50.0%
	CTCTTGTTGGTACGCATGTG+GGG	+	chr4.1:38786941-38786960	MS.gene08606:CDS	50.0%
	CTGAATTGTTCTCCGCCTTG+AGG	-	chr4.1:38787230-38787249	None:intergenic	50.0%
	CTGCGGTGACAAGTTTGAAG+AGG	+	chr4.1:38787170-38787189	MS.gene08606:CDS	50.0%
	CTGGTCATTGAGAGGGAAGA+AGG	+	chr4.1:38787063-38787082	MS.gene08606:CDS	50.0%
	GAAATGGGGTCCTTTCCTCA+AGG	+	chr4.1:38787212-38787231	MS.gene08606:CDS	50.0%
	GAGAAGGTTGGAGCTCTTGT+TGG	+	chr4.1:38786928-38786947	MS.gene08606:CDS	50.0%
	GAGGTTTATGCGAATCAGGG+TGG	+	chr4.1:38787008-38787027	MS.gene08606:CDS	50.0%
	GCGAGAGCAGCAAGAAGAAA+TGG	+	chr4.1:38787196-38787215	MS.gene08606:CDS	50.0%
	GCGGAGGTTTATGCGAATCA+GGG	+	chr4.1:38787005-38787024	MS.gene08606:CDS	50.0%
	GCTACTCTTGAGACCAGACT+TGG	+	chr4.1:38786667-38786686	MS.gene08606:CDS	50.0%
	GCTCTTGTTGGTACGCATGT+GGG	+	chr4.1:38786940-38786959	MS.gene08606:CDS	50.0%
	GGATTCTTGAACGCAGTCCT+TGG	+	chr4.1:38786782-38786801	MS.gene08606:CDS	50.0%
	GGTCATTGAGAGGGAAGAAG+GGG	+	chr4.1:38787065-38787084	MS.gene08606:CDS	50.0%
	GGTGACAAGTTTGAAGAGGG+TGG	+	chr4.1:38787174-38787193	MS.gene08606:CDS	50.0%
	TCGCATGACTCTCATTCCCA+TGG	+	chr4.1:38786711-38786730	MS.gene08606:CDS	50.0%
	TTGTTCTCCGCCTTGAGGAA+AGG	-	chr4.1:38787225-38787244	None:intergenic	50.0%
!!	CCAACTGCCCTTTGGTTTGA+TGG	+	chr4.1:38786903-38786922	MS.gene08606:CDS	50.0%
	AGACCAGACTTGGCCCCATA+TGG	+	chr4.1:38786677-38786696	MS.gene08606:CDS	55.0%
	ATGGGGTCCTTTCCTCAAGG+CGG	+	chr4.1:38787215-38787234	MS.gene08606:CDS	55.0%
	CAACACGACCCACAAGACAC+AGG	-	chr4.1:38786624-38786643	None:intergenic	55.0%
	CTGCTGGACCTGTGTCTTGT+GGG	+	chr4.1:38786613-38786632	MS.gene08606:CDS	55.0%
	GACCAGACTTGGCCCCATAT+GGG	+	chr4.1:38786678-38786697	MS.gene08606:CDS	55.0%
	GCGAATCAGGGTGGAAGTTG+CGG	+	chr4.1:38787017-38787036	MS.gene08606:CDS	55.0%
	GCGGAGAACAATTCAGTGGG+TGG	+	chr4.1:38787234-38787253	MS.gene08606:CDS	55.0%
	GGCGGAGGTTTATGCGAATC+AGG	+	chr4.1:38787004-38787023	MS.gene08606:CDS	55.0%
	GGCGGCCGGAGTAATAATTC+CGG	+	chr4.1:38787288-38787307	MS.gene08606:CDS	55.0%
	GTGTCTTGTGGGTCGTGTTG+TGG	+	chr4.1:38786624-38786643	MS.gene08606:CDS	55.0%
	TCTCACTCAAGCTGAGCTGC+TGG	+	chr4.1:38786597-38786616	MS.gene08606:CDS	55.0%
	TTCCCATATGGGGCCAAGTC+TGG	-	chr4.1:38786683-38786702	None:intergenic	55.0%
	ACAACTATGGGCCATGGCGG+AGG	+	chr4.1:38786989-38787008	MS.gene08606:CDS	60.0%
	GCTGCTGGACCTGTGTCTTG+TGG	+	chr4.1:38786612-38786631	MS.gene08606:CDS	60.0%
	TCCGGTGATCGGAGGGATGA+GGG	+	chr4.1:38787306-38787325	MS.gene08606:CDS	60.0%
	TTCCGGTGATCGGAGGGATG+AGG	+	chr4.1:38787305-38787324	MS.gene08606:CDS	60.0%
	CCCCTCATCCCTCCGATCAC+CGG	-	chr4.1:38787310-38787329	None:intergenic	65.0%
	CCGGTGATCGGAGGGATGAG+GGG	+	chr4.1:38787307-38787326	MS.gene08606:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	38786544	38787416	38786544	ID=MS.gene08606
chr4.1	mRNA	38786544	38787416	38786544	ID=MS.gene08606.t1;Parent=MS.gene08606
chr4.1	exon	38786544	38787416	38786544	ID=MS.gene08606.t1.exon1;Parent=MS.gene08606.t1
chr4.1	CDS	38786544	38787416	38786544	ID=cds.MS.gene08606.t1;Parent=MS.gene08606.t1

Gene Sequence

>MS.gene08606

ATGGAGAGCTTGAATCTTAACGCTGATCATGGAGCTGCTTCTCAAAGACCGAATCTCACTCAAGCTGAGCTGCTGGACCTGTGTCTTGTGGGTCGTGTTGTGGTGAACAAGCCGATTCATTTGGCTACTCTTGAGACCAGACTTGGCCCCATATGGGAACCAAAATATCGCATGACTCTCATTCCCATGGAAGGTAACAAATTCTTAGTCCAACTTTATTCTAAGGCAGATCTGAAAAGGATTCTTGAACGCAGTCCTTGGTTGCTAGACAATAATATGATCATCCTGAAGAAGGTCGAGATTGGAGAAGAGCCGCTAACAAAATCCATGGACACCACTGAAATCTGGGCACAGATTCACCAACTGCCCTTTGGTTTGATGGATGAGAAGGTTGGAGCTCTTGTTGGTACGCATGTGGGGAAGATGATCAAGTTTGACGAGGACAACAACTATGGGCCATGGCGGAGGTTTATGCGAATCAGGGTGGAAGTTGCGGTTGATCAGCCATTACAACAAGAGCTGGTCATTGAGAGGGAAGAAGGGGATAATATTCGACTGACTATCAAATATGAGAAGCTCGGTAAGTTTTGTTTTGTTTGTGGCATAATAGGTCACTCTGAAAGTTTCTGCGGTGACAAGTTTGAAGAGGGTGGCGAGAGCAGCAAGAAGAAATGGGGTCCTTTCCTCAAGGCGGAGAACAATTCAGTGGGTGGCAATAACAAGGAGGCGAATAGATGGATCATAGGCGGCCGGAGTAATAATTCCGGTGATCGGAGGGATGAGGGGACATCAATTAATGCCAATAATTATGAATCAATGTTAATTGATGGCTGCGGTTTTCCAGTCACAGATTATATGGACGCATTAAAGTGA

Protein sequence

>MS.gene08606.t1

MESLNLNADHGAASQRPNLTQAELLDLCLVGRVVVNKPIHLATLETRLGPIWEPKYRMTLIPMEGNKFLVQLYSKADLKRILERSPWLLDNNMIILKKVEIGEEPLTKSMDTTEIWAQIHQLPFGLMDEKVGALVGTHVGKMIKFDEDNNYGPWRRFMRIRVEVAVDQPLQQELVIEREEGDNIRLTIKYEKLGKFCFVCGIIGHSESFCGDKFEEGGESSKKKWGPFLKAENNSVGGNNKEANRWIIGGRSNNSGDRRDEGTSINANNYESMLIDGCGFPVTDYMDALK