Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34618.t1 | AES70414.1 | 38.7 | 266 | 102 | 3 | 35 | 244 | 4 | 264 | 2.70E-38 | 169.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34618.t1 | G7J017 | 38.7 | 266 | 102 | 3 | 35 | 244 | 4 | 264 | 2.0e-38 | 169.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34618.t1 | MTR_3g053920 | 39.583 | 240 | 86 | 3 | 35 | 220 | 4 | 238 | 7.04e-49 | 162 |
MS.gene34618.t1 | MTR_2g061500 | 55.319 | 94 | 42 | 0 | 37 | 130 | 6 | 99 | 2.27e-33 | 118 |
MS.gene34618.t1 | MTR_4g103530 | 31.073 | 177 | 73 | 7 | 90 | 223 | 5 | 175 | 2.30e-12 | 64.3 |
MS.gene34618.t1 | MTR_0010s0370 | 31.522 | 92 | 61 | 1 | 39 | 128 | 4 | 95 | 9.46e-12 | 62.8 |
MS.gene34618.t1 | MTR_0010s0350 | 31.522 | 92 | 61 | 1 | 39 | 128 | 4 | 95 | 9.46e-12 | 62.8 |
MS.gene34618.t1 | MTR_6g033215 | 35.135 | 74 | 48 | 0 | 55 | 128 | 117 | 190 | 1.01e-11 | 63.9 |
MS.gene34618.t1 | MTR_1g036720 | 31.183 | 93 | 62 | 1 | 38 | 128 | 3 | 95 | 1.34e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 85 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGACAATAAAAGTATAAATT+TGG | 0.088342 | 8.1:-47538880 | None:intergenic |
TCTACTATGGTTTCTCTTAA+TGG | 0.195587 | 8.1:+47539775 | MS.gene34618:CDS |
GACAATAAAAGTATAAATTT+GGG | 0.217920 | 8.1:-47538879 | None:intergenic |
GCAGCTTGAGAGGGCCTATT+TGG | 0.224382 | 8.1:-47539688 | None:intergenic |
GGGTGCTAGTATCGTCTTTA+TGG | 0.235540 | 8.1:+47539888 | MS.gene34618:CDS |
GTACTACTGCCACCAATATT+TGG | 0.239149 | 8.1:+47539650 | MS.gene34618:CDS |
TGCCACCAATATTTGGTTAC+AGG | 0.284607 | 8.1:+47539657 | MS.gene34618:CDS |
AGGCGAGGCTGGGTCACTTT+TGG | 0.293633 | 8.1:+47539081 | MS.gene34618:CDS |
CTACTATGGTTTCTCTTAAT+GGG | 0.298026 | 8.1:+47539776 | MS.gene34618:CDS |
CGCCTATTTCAAGGCGAGGC+TGG | 0.341448 | 8.1:+47539070 | MS.gene34618:CDS |
TTGGGGTGGAGGAAGAGAAT+TGG | 0.343749 | 8.1:-47538861 | None:intergenic |
TGGGGTGGAGGAAGAGAATT+GGG | 0.348287 | 8.1:-47538860 | None:intergenic |
ACCCAGCCTCGCCTTGAAAT+AGG | 0.355390 | 8.1:-47539072 | None:intergenic |
CGGATCCTGTAACCAAATAT+TGG | 0.367035 | 8.1:-47539662 | None:intergenic |
GAATTGGGTTAACTGTGAAT+TGG | 0.371093 | 8.1:-47538845 | None:intergenic |
TGATATCAAAACAAAACTTC+TGG | 0.372766 | 8.1:+47539828 | MS.gene34618:CDS |
GAGTGCTGGTCCCTCTACTA+TGG | 0.417812 | 8.1:+47539762 | MS.gene34618:CDS |
TGGTGTGAATTCCTCTCAGC+AGG | 0.418476 | 8.1:+47539867 | MS.gene34618:CDS |
GCCTATTTCAAGGCGAGGCT+GGG | 0.422976 | 8.1:+47539071 | MS.gene34618:CDS |
CGGGTTTCAATCACTAAATC+AGG | 0.423461 | 8.1:+47539116 | MS.gene34618:CDS |
AATTGGGTTAACTGTGAATT+GGG | 0.426132 | 8.1:-47538844 | None:intergenic |
GTGATTGAAACCCGTTTGAC+AGG | 0.429285 | 8.1:-47539107 | None:intergenic |
TACAGGATCCGATTCCAAAT+AGG | 0.433796 | 8.1:+47539674 | MS.gene34618:CDS |
CTGATGATGGTGTGAGAGGC+CGG | 0.447260 | 8.1:+47539593 | MS.gene34618:CDS |
TGAGACAGTGTTCGAGGATG+GGG | 0.455294 | 8.1:-47539013 | None:intergenic |
GTACCCATCCTCCGTAGAAC+TGG | 0.462342 | 8.1:-47539631 | None:intergenic |
GGTTCGTTTCGCCTATTTCA+AGG | 0.463659 | 8.1:+47539061 | MS.gene34618:CDS |
ATCCTCGAACACTGTCTCAT+TGG | 0.464753 | 8.1:+47539017 | MS.gene34618:CDS |
CTGCCCTAGACTCTTCGAAA+TGG | 0.475350 | 8.1:+47539567 | MS.gene34618:intron |
TGAGAGGGCCTATTTGGAAT+CGG | 0.480087 | 8.1:-47539682 | None:intergenic |
GCAAATGACCTCAATCTTGA+AGG | 0.490360 | 8.1:+47538933 | MS.gene34618:CDS |
GGCCTCACTTTGACTGATGA+AGG | 0.497318 | 8.1:+47538954 | MS.gene34618:CDS |
AAAGTATAAATTTGGGGTGG+AGG | 0.498986 | 8.1:-47538872 | None:intergenic |
ATGAGACAGTGTTCGAGGAT+GGG | 0.508033 | 8.1:-47539014 | None:intergenic |
GAGACCAGTTCTACGGAGGA+TGG | 0.514154 | 8.1:+47539627 | MS.gene34618:CDS |
ATTAAGAGAAACCATAGTAG+AGG | 0.516207 | 8.1:-47539773 | None:intergenic |
TCTCAAGCTGCGAATGGTAA+TGG | 0.518387 | 8.1:+47539700 | MS.gene34618:CDS |
TGATGATGGTGTGAGAGGCC+GGG | 0.520693 | 8.1:+47539594 | MS.gene34618:CDS |
CAGAGGTGACTGAGTTTGAC+GGG | 0.521086 | 8.1:-47539920 | None:intergenic |
GACCAATGAGACAGTGTTCG+AGG | 0.522492 | 8.1:-47539019 | None:intergenic |
GACGTGATTAGTGAAAGCTT+TGG | 0.522858 | 8.1:-47538901 | None:intergenic |
GCCCTCCTCTAGAACCTTTG+CGG | 0.524474 | 8.1:-47539180 | None:intergenic |
AATGAGACAGTGTTCGAGGA+TGG | 0.534779 | 8.1:-47539015 | None:intergenic |
TCAGAGGTGACTGAGTTTGA+CGG | 0.543608 | 8.1:-47539921 | None:intergenic |
CCTTTGCGGCATCGAGTCGA+TGG | 0.547990 | 8.1:-47539166 | None:intergenic |
TCGTGTGCTAATAGATAAGC+AGG | 0.548894 | 8.1:+47539040 | MS.gene34618:CDS |
CTGGCTGCTGAAATTAATGC+TGG | 0.551930 | 8.1:+47539847 | MS.gene34618:CDS |
TGTGAATTGGGAGCTAGCCA+TGG | 0.555981 | 8.1:-47538832 | None:intergenic |
GATGATGGTGTGAGAGGCCG+GGG | 0.557935 | 8.1:+47539595 | MS.gene34618:CDS |
GCCGCAAAGGTTCTAGAGGA+GGG | 0.561157 | 8.1:+47539179 | MS.gene34618:CDS |
TTCGAAATGGAGTCTGATGA+TGG | 0.565633 | 8.1:+47539580 | MS.gene34618:CDS |
TTATACTTGTCGTACAGCCA+TGG | 0.571796 | 8.1:-47539203 | None:intergenic |
AACAGCAGGGTCAAGGTCGA+AGG | 0.572094 | 8.1:-47538982 | None:intergenic |
GCTGCGAATGGTAATGGTAC+TGG | 0.574174 | 8.1:+47539706 | MS.gene34618:CDS |
CCATCGACTCGATGCCGCAA+AGG | 0.575597 | 8.1:+47539166 | MS.gene34618:CDS |
TATACTTGTCGTACAGCCAT+GGG | 0.579286 | 8.1:-47539202 | None:intergenic |
CTGGTCTCAGAAAATCTCCC+CGG | 0.579440 | 8.1:-47539612 | None:intergenic |
AAGTGAGGCCTTCAAGATTG+AGG | 0.581701 | 8.1:-47538941 | None:intergenic |
TGAGGTCATTTGCAGCCTTG+AGG | 0.583067 | 8.1:-47538923 | None:intergenic |
ATCCTGTAACCAAATATTGG+TGG | 0.585978 | 8.1:-47539659 | None:intergenic |
GATAATAATGATGTGAGTGC+TGG | 0.586868 | 8.1:+47539748 | MS.gene34618:CDS |
AGACCAGTTCTACGGAGGAT+GGG | 0.592396 | 8.1:+47539628 | MS.gene34618:CDS |
TTACCATTCGCAGCTTGAGA+GGG | 0.595083 | 8.1:-47539697 | None:intergenic |
TGATTGAAACCCGTTTGACA+GGG | 0.596335 | 8.1:-47539106 | None:intergenic |
AGGTTCTAGAGGAGGGCCCA+TGG | 0.596509 | 8.1:+47539186 | MS.gene34618:CDS |
AGGCCCTCTCAAGCTGCGAA+TGG | 0.596520 | 8.1:+47539694 | MS.gene34618:CDS |
GTGAATTGGGAGCTAGCCAT+GGG | 0.597604 | 8.1:-47538831 | None:intergenic |
TTTCACTAATCACGTCCTCA+AGG | 0.599788 | 8.1:+47538908 | MS.gene34618:CDS |
TGCCGCAAAGGTTCTAGAGG+AGG | 0.601967 | 8.1:+47539178 | MS.gene34618:CDS |
TTTCAGCAACAGCAGGGTCA+AGG | 0.603010 | 8.1:-47538989 | None:intergenic |
ACATCAGTTAGCAGCATCAG+AGG | 0.604990 | 8.1:-47539937 | None:intergenic |
GTTTCGCCTATTTCAAGGCG+AGG | 0.607967 | 8.1:+47539066 | MS.gene34618:CDS |
ACAATAAAAGTATAAATTTG+GGG | 0.608675 | 8.1:-47538878 | None:intergenic |
CGATGCCGCAAAGGTTCTAG+AGG | 0.610023 | 8.1:+47539175 | MS.gene34618:CDS |
ATTACCATTCGCAGCTTGAG+AGG | 0.610753 | 8.1:-47539698 | None:intergenic |
TTAAGAGAAACCATAGTAGA+GGG | 0.624389 | 8.1:-47539772 | None:intergenic |
GAGACAGTGTTCGAGGATGG+GGG | 0.624634 | 8.1:-47539012 | None:intergenic |
ATAAAAGTATAAATTTGGGG+TGG | 0.624659 | 8.1:-47538875 | None:intergenic |
TGCTGCTAACTGATGTGCCA+CGG | 0.627538 | 8.1:+47539944 | MS.gene34618:CDS |
TTCTGAGACCAGTTCTACGG+AGG | 0.630989 | 8.1:+47539623 | MS.gene34618:CDS |
GGTGTGAATTCCTCTCAGCA+GGG | 0.633646 | 8.1:+47539868 | MS.gene34618:CDS |
TTCAATCACTAAATCAGGTG+CGG | 0.637772 | 8.1:+47539121 | MS.gene34618:CDS |
GACCTTCATCAGTCAAAGTG+AGG | 0.649742 | 8.1:-47538956 | None:intergenic |
GAGTCTGATGATGGTGTGAG+AGG | 0.666119 | 8.1:+47539589 | MS.gene34618:CDS |
GATACTAGCACCCTGCTGAG+AGG | 0.692337 | 8.1:-47539878 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATGATTTATAAAAAATGTTT+TGG | + | chr8.1:47541558-47541577 | MS.gene34618:intron | 10.0% |
!!! | ATTACATTTTATTTTATTTC+AGG | - | chr8.1:47541013-47541032 | None:intergenic | 10.0% |
!! | TGAATCTAAATTAGAAATTA+CGG | + | chr8.1:47540529-47540548 | MS.gene34618:intron | 15.0% |
!!! | ACAATAAAAGTATAAATTTG+GGG | - | chr8.1:47538881-47538900 | None:intergenic | 15.0% |
!!! | AGTTTTAAGATTATAAAGTT+TGG | + | chr8.1:47540074-47540093 | MS.gene34618:intron | 15.0% |
!!! | GACAATAAAAGTATAAATTT+GGG | - | chr8.1:47538882-47538901 | None:intergenic | 15.0% |
!!! | TTATAAAAAATGTTTTGGAT+TGG | + | chr8.1:47541563-47541582 | MS.gene34618:intron | 15.0% |
!! | AAAGAAAACGATATAAACTT+AGG | + | chr8.1:47541786-47541805 | MS.gene34618:intron | 20.0% |
!! | AACATCAATTAAGTTAGATT+TGG | + | chr8.1:47541421-47541440 | MS.gene34618:intron | 20.0% |
!! | AGAAAAATGATACAAACTTT+GGG | + | chr8.1:47541639-47541658 | MS.gene34618:intron | 20.0% |
!! | ATATGATGAATATCATAATG+TGG | + | chr8.1:47542069-47542088 | MS.gene34618:intron | 20.0% |
!! | ATCATAAAATAAAAGAGTCT+TGG | + | chr8.1:47540119-47540138 | MS.gene34618:intron | 20.0% |
!! | ATGGTTAATTCATGTTAAAA+CGG | + | chr8.1:47540506-47540525 | MS.gene34618:intron | 20.0% |
!! | GCAATAAGAAAGATTAAAAA+TGG | + | chr8.1:47541198-47541217 | MS.gene34618:intron | 20.0% |
!! | TTGAAGTAAAAGATTCAAAA+AGG | + | chr8.1:47541033-47541052 | MS.gene34618:intron | 20.0% |
!!! | ATTTGGTTTTATGAATAACT+TGG | + | chr8.1:47541757-47541776 | MS.gene34618:intron | 20.0% |
!!! | GGACAATAAAAGTATAAATT+TGG | - | chr8.1:47538883-47538902 | None:intergenic | 20.0% |
!!! | GTGATATTATTGTTTCTTTT+AGG | + | chr8.1:47542126-47542145 | MS.gene34618:intron | 20.0% |
! | AAAACTAAAACAGAGTAACT+TGG | + | chr8.1:47540800-47540819 | MS.gene34618:intron | 25.0% |
! | AAACTAAAACAGAGTAACTT+GGG | + | chr8.1:47540801-47540820 | MS.gene34618:intron | 25.0% |
! | AATTAACCATTAACAAACTG+TGG | - | chr8.1:47540496-47540515 | None:intergenic | 25.0% |
! | AATTTCAAATATGAGAAGCT+TGG | + | chr8.1:47539499-47539518 | MS.gene34618:intron | 25.0% |
! | AGGTTCATAATTTACCATTT+AGG | + | chr8.1:47539300-47539319 | MS.gene34618:intron | 25.0% |
! | ATGAAATTATGGTTAAAGCT+TGG | + | chr8.1:47540556-47540575 | MS.gene34618:intron | 25.0% |
! | ATTACGGTTACATGAAATTA+TGG | + | chr8.1:47540545-47540564 | MS.gene34618:intron | 25.0% |
! | ATTTCAACTTTCTAAACCTT+GGG | + | chr8.1:47541397-47541416 | MS.gene34618:intron | 25.0% |
! | CAAAAGATGAATGTTTATGA+TGG | + | chr8.1:47540712-47540731 | MS.gene34618:intron | 25.0% |
! | CAGAAAAATGATACAAACTT+TGG | + | chr8.1:47541638-47541657 | MS.gene34618:intron | 25.0% |
! | TAAAAGAGTCTTGGAATTAT+TGG | + | chr8.1:47540128-47540147 | MS.gene34618:intron | 25.0% |
! | TAAAATCTAAGCAACTACAA+GGG | + | chr8.1:47540768-47540787 | MS.gene34618:intron | 25.0% |
! | TATTTCAACTTTCTAAACCT+TGG | + | chr8.1:47541396-47541415 | MS.gene34618:intron | 25.0% |
! | TGAATGAATTGTTGATGTTT+GGG | + | chr8.1:47542040-47542059 | MS.gene34618:intron | 25.0% |
! | TGATATCAAAACAAAACTTC+TGG | + | chr8.1:47539828-47539847 | MS.gene34618:CDS | 25.0% |
! | TTAAAATCTAAGCAACTACA+AGG | + | chr8.1:47540767-47540786 | MS.gene34618:intron | 25.0% |
! | TTTGTCAAACTAATGCTTTA+TGG | + | chr8.1:47541969-47541988 | MS.gene34618:intron | 25.0% |
! | TTTGTGTATATACTTAGTTG+AGG | + | chr8.1:47541718-47541737 | MS.gene34618:intron | 25.0% |
!! | AAACATTCATCTTTTGTTCT+TGG | - | chr8.1:47540708-47540727 | None:intergenic | 25.0% |
!! | ATAAAAGTATAAATTTGGGG+TGG | - | chr8.1:47538878-47538897 | None:intergenic | 25.0% |
!!! | AGTCTCTTTTGTTGTATAAT+GGG | + | chr8.1:47541221-47541240 | MS.gene34618:intron | 25.0% |
!!! | CGCATTATGAATTGATTTTT+GGG | + | chr8.1:47540431-47540450 | MS.gene34618:intron | 25.0% |
!!! | GAATTCGTTTACTTTGATTT+TGG | + | chr8.1:47541903-47541922 | MS.gene34618:intron | 25.0% |
!!! | TCGCATTATGAATTGATTTT+TGG | + | chr8.1:47540430-47540449 | MS.gene34618:intron | 25.0% |
!!! | TTTGATTTTGGTGAATTTGT+CGG | + | chr8.1:47541915-47541934 | MS.gene34618:intron | 25.0% |
AACTTAATTGATGTTTCCCA+AGG | - | chr8.1:47541416-47541435 | None:intergenic | 30.0% | |
AATTGGGTTAACTGTGAATT+GGG | - | chr8.1:47538847-47538866 | None:intergenic | 30.0% | |
AGACATAAGAAGAATCAGTT+TGG | - | chr8.1:47541369-47541388 | None:intergenic | 30.0% | |
AGTAATCAAGTCAGTGAAAT+AGG | - | chr8.1:47540297-47540316 | None:intergenic | 30.0% | |
ATCAATTCATAATGCGAAAG+CGG | - | chr8.1:47540427-47540446 | None:intergenic | 30.0% | |
ATTAAGAGAAACCATAGTAG+AGG | - | chr8.1:47539776-47539795 | None:intergenic | 30.0% | |
CAAAGTCACATTTCATCTAA+AGG | - | chr8.1:47542107-47542126 | None:intergenic | 30.0% | |
CTACTATGGTTTCTCTTAAT+GGG | + | chr8.1:47539776-47539795 | MS.gene34618:CDS | 30.0% | |
GTGAATGAATTGTTGATGTT+TGG | + | chr8.1:47542039-47542058 | MS.gene34618:intron | 30.0% | |
TCAAACTAATGCTTTATGGT+CGG | + | chr8.1:47541973-47541992 | MS.gene34618:intron | 30.0% | |
TCTACTATGGTTTCTCTTAA+TGG | + | chr8.1:47539775-47539794 | MS.gene34618:CDS | 30.0% | |
TTAAGAGAAACCATAGTAGA+GGG | - | chr8.1:47539775-47539794 | None:intergenic | 30.0% | |
TTTCAGGAACGAATATATGA+TGG | - | chr8.1:47540997-47541016 | None:intergenic | 30.0% | |
! | GCATTCAAACTTGTTTGATT+TGG | + | chr8.1:47541740-47541759 | MS.gene34618:intron | 30.0% |
! | TACACCTAATTTCTAAAGAC+CGG | + | chr8.1:47540208-47540227 | MS.gene34618:intron | 30.0% |
!! | AATGTTTTGGATTGGAATCA+CGG | + | chr8.1:47541571-47541590 | MS.gene34618:intron | 30.0% |
!! | GAGTCTCTTTTGTTGTATAA+TGG | + | chr8.1:47541220-47541239 | MS.gene34618:intron | 30.0% |
!! | GTCTCTTTTGTTGTATAATG+GGG | + | chr8.1:47541222-47541241 | MS.gene34618:intron | 30.0% |
!!! | TGAATTGATTTTTGGGATGA+TGG | + | chr8.1:47540438-47540457 | MS.gene34618:intron | 30.0% |
AAAAAGATATCGTTCCGACA+GGG | + | chr8.1:47540011-47540030 | MS.gene34618:intron | 35.0% | |
AAGAATGGCAGAACGTATTA+AGG | + | chr8.1:47539456-47539475 | MS.gene34618:intron | 35.0% | |
ACAAACAGATATAAGTGCAG+TGG | - | chr8.1:47541860-47541879 | None:intergenic | 35.0% | |
ACAAGCAAAGATTCAAGTGT+GGG | - | chr8.1:47541150-47541169 | None:intergenic | 35.0% | |
ATCCTGTAACCAAATATTGG+TGG | - | chr8.1:47539662-47539681 | None:intergenic | 35.0% | |
ATTTCTCAAGAGAAAACGGT+AGG | + | chr8.1:47541513-47541532 | MS.gene34618:intron | 35.0% | |
CTCGATTTCTCAAGAGAAAA+CGG | + | chr8.1:47541509-47541528 | MS.gene34618:intron | 35.0% | |
GAATTGGGTTAACTGTGAAT+TGG | - | chr8.1:47538848-47538867 | None:intergenic | 35.0% | |
GAGTAGACTCTTCTTATGTT+GGG | - | chr8.1:47540619-47540638 | None:intergenic | 35.0% | |
GATAATAATGATGTGAGTGC+TGG | + | chr8.1:47539748-47539767 | MS.gene34618:CDS | 35.0% | |
GCTGTACGACAAGTATAATA+TGG | + | chr8.1:47539208-47539227 | MS.gene34618:intron | 35.0% | |
GTTAAAGTCTTAGCTAGTGA+AGG | - | chr8.1:47540172-47540191 | None:intergenic | 35.0% | |
TAAAAAGATATCGTTCCGAC+AGG | + | chr8.1:47540010-47540029 | MS.gene34618:intron | 35.0% | |
TAGTTTGACAAAGTTCGTCT+AGG | - | chr8.1:47541961-47541980 | None:intergenic | 35.0% | |
TCTTCTTATGTTGGGATTGT+TGG | - | chr8.1:47540611-47540630 | None:intergenic | 35.0% | |
TGAGTAGACTCTTCTTATGT+TGG | - | chr8.1:47540620-47540639 | None:intergenic | 35.0% | |
TGTGTACACATACGTTTCAT+AGG | - | chr8.1:47541837-47541856 | None:intergenic | 35.0% | |
TTATGGTCGGATAACTAGTA+GGG | + | chr8.1:47541986-47542005 | MS.gene34618:intron | 35.0% | |
TTCAATCACTAAATCAGGTG+CGG | + | chr8.1:47539121-47539140 | MS.gene34618:CDS | 35.0% | |
TTGAATTCATAACTCCCTGT+CGG | - | chr8.1:47540028-47540047 | None:intergenic | 35.0% | |
TTGGTGAATTTGTCGGAAAA+TGG | + | chr8.1:47541922-47541941 | MS.gene34618:intron | 35.0% | |
TTTATGGTCGGATAACTAGT+AGG | + | chr8.1:47541985-47542004 | MS.gene34618:intron | 35.0% | |
TTTGTGTGTATACTCGATTG+AGG | + | chr8.1:47541875-47541894 | MS.gene34618:intron | 35.0% | |
! | AAAGTATAAATTTGGGGTGG+AGG | - | chr8.1:47538875-47538894 | None:intergenic | 35.0% |
! | AATGGAATTGGCAGGTTTTT+AGG | + | chr8.1:47539344-47539363 | MS.gene34618:intron | 35.0% |
! | ACTTTGGGTTTGAAGTGAAT+TGG | + | chr8.1:47541654-47541673 | MS.gene34618:intron | 35.0% |
! | AGGAACGAATATATGATGGA+AGG | - | chr8.1:47540993-47541012 | None:intergenic | 35.0% |
! | CGATGATTAACTAGCCTAAA+TGG | - | chr8.1:47539317-47539336 | None:intergenic | 35.0% |
! | CTCTTGAGAAATCGAGTTTT+CGG | - | chr8.1:47541505-47541524 | None:intergenic | 35.0% |
! | GAAACCGGTCTTTAGAAATT+AGG | - | chr8.1:47540215-47540234 | None:intergenic | 35.0% |
! | GGTTAAAGCTTGGTTTGATT+AGG | + | chr8.1:47540566-47540585 | MS.gene34618:intron | 35.0% |
! | TGTCTAATTCCTTTTGCTTG+AGG | - | chr8.1:47541173-47541192 | None:intergenic | 35.0% |
!! | ATATATGATGGAAGGTGTCT+TGG | - | chr8.1:47540985-47541004 | None:intergenic | 35.0% |
!! | TCGTTTCCACAGTTTGTTAA+TGG | + | chr8.1:47540487-47540506 | MS.gene34618:intron | 35.0% |
!!! | ATTTTCTGAGACCAGTTCTA+CGG | + | chr8.1:47539620-47539639 | MS.gene34618:CDS | 35.0% |
AAGAACATGGTTGCATGTTC+TGG | + | chr8.1:47541251-47541270 | MS.gene34618:intron | 40.0% | |
AAGAGAAAACGGTAGGACTA+GGG | + | chr8.1:47541520-47541539 | MS.gene34618:intron | 40.0% | |
AAGCAAAGATTCAAGTGTGG+GGG | - | chr8.1:47541148-47541167 | None:intergenic | 40.0% | |
AAGCAACTACAAGGGCTATT+CGG | + | chr8.1:47540776-47540795 | MS.gene34618:intron | 40.0% | |
ACAAACTGTGGAAACGAAAG+TGG | - | chr8.1:47540484-47540503 | None:intergenic | 40.0% | |
ACGTATACACACACGTCTAT+AGG | - | chr8.1:47541680-47541699 | None:intergenic | 40.0% | |
ACTCCATTTCGAAGAGTCTA+GGG | - | chr8.1:47539573-47539592 | None:intergenic | 40.0% | |
AGAACATGCAACCATGTTCT+TGG | - | chr8.1:47541252-47541271 | None:intergenic | 40.0% | |
ATGGCAGAACGTATTAAGGA+TGG | + | chr8.1:47539460-47539479 | MS.gene34618:intron | 40.0% | |
CAAGCAAAGATTCAAGTGTG+GGG | - | chr8.1:47541149-47541168 | None:intergenic | 40.0% | |
CACAAGTCAAAATCTTGGCA+CGG | - | chr8.1:47540892-47540911 | None:intergenic | 40.0% | |
CACATACGTTTCATAGGCTA+AGG | - | chr8.1:47541831-47541850 | None:intergenic | 40.0% | |
CCATTCTTTCTTCAGAGGTT+GGG | - | chr8.1:47539444-47539463 | None:intergenic | 40.0% | |
CGGATCCTGTAACCAAATAT+TGG | - | chr8.1:47539665-47539684 | None:intergenic | 40.0% | |
CGGGTTTCAATCACTAAATC+AGG | + | chr8.1:47539116-47539135 | MS.gene34618:CDS | 40.0% | |
CTAGTGAAGGACTTGTCATT+AGG | - | chr8.1:47540159-47540178 | None:intergenic | 40.0% | |
GAACATGCAACCATGTTCTT+GGG | - | chr8.1:47541251-47541270 | None:intergenic | 40.0% | |
GACAAGCAAAGATTCAAGTG+TGG | - | chr8.1:47541151-47541170 | None:intergenic | 40.0% | |
GACGTGATTAGTGAAAGCTT+TGG | - | chr8.1:47538904-47538923 | None:intergenic | 40.0% | |
GCAAATGACCTCAATCTTGA+AGG | + | chr8.1:47538933-47538952 | MS.gene34618:CDS | 40.0% | |
GTACTACTGCCACCAATATT+TGG | + | chr8.1:47539650-47539669 | MS.gene34618:CDS | 40.0% | |
TACAGGATCCGATTCCAAAT+AGG | + | chr8.1:47539674-47539693 | MS.gene34618:CDS | 40.0% | |
TAGCTCTTACATGCGTTTGA+AGG | + | chr8.1:47539403-47539422 | MS.gene34618:intron | 40.0% | |
TATACTTGTCGTACAGCCAT+GGG | - | chr8.1:47539205-47539224 | None:intergenic | 40.0% | |
TATGGTCGGATAACTAGTAG+GGG | + | chr8.1:47541987-47542006 | MS.gene34618:intron | 40.0% | |
TCAAGTCAGTGAAATAGGCT+TGG | - | chr8.1:47540292-47540311 | None:intergenic | 40.0% | |
TCACCTTTCCGATAAAAGTC+CGG | + | chr8.1:47540246-47540265 | MS.gene34618:intron | 40.0% | |
TCGTGTGCTAATAGATAAGC+AGG | + | chr8.1:47539040-47539059 | MS.gene34618:CDS | 40.0% | |
TGATTGAAACCCGTTTGACA+GGG | - | chr8.1:47539109-47539128 | None:intergenic | 40.0% | |
TGCCACCAATATTTGGTTAC+AGG | + | chr8.1:47539657-47539676 | MS.gene34618:CDS | 40.0% | |
TGGAATCACGGACTTTAACT+TGG | + | chr8.1:47541583-47541602 | MS.gene34618:intron | 40.0% | |
TGGTTCAAATTCACACTTGC+TGG | - | chr8.1:47539263-47539282 | None:intergenic | 40.0% | |
TTATACTTGTCGTACAGCCA+TGG | - | chr8.1:47539206-47539225 | None:intergenic | 40.0% | |
TTCGAAATGGAGTCTGATGA+TGG | + | chr8.1:47539580-47539599 | MS.gene34618:CDS | 40.0% | |
TTCTGCCATTCTTTCTTCAG+AGG | - | chr8.1:47539449-47539468 | None:intergenic | 40.0% | |
TTTCACTAATCACGTCCTCA+AGG | + | chr8.1:47538908-47538927 | MS.gene34618:CDS | 40.0% | |
TTTGCTTGTCCTCAAGCAAA+AGG | + | chr8.1:47541161-47541180 | MS.gene34618:intron | 40.0% | |
! | ACTTTTATCGGAAAGGTGAG+GGG | - | chr8.1:47540245-47540264 | None:intergenic | 40.0% |
! | AGAGCTATGCAGAGTATTTC+TGG | - | chr8.1:47539390-47539409 | None:intergenic | 40.0% |
! | ATTTGAACCACCTCGACTTT+TGG | + | chr8.1:47539273-47539292 | MS.gene34618:intron | 40.0% |
! | CAATTCAGCACCCATGTTTT+GGG | + | chr8.1:47541309-47541328 | MS.gene34618:intron | 40.0% |
! | GAAATAGGCTTGGTTACTAG+TGG | - | chr8.1:47540282-47540301 | None:intergenic | 40.0% |
! | GACTTTTATCGGAAAGGTGA+GGG | - | chr8.1:47540246-47540265 | None:intergenic | 40.0% |
! | TAGGCTAGTTAATCATCGTG+TGG | + | chr8.1:47539319-47539338 | MS.gene34618:intron | 40.0% |
! | TTTGAACCACCTCGACTTTT+GGG | + | chr8.1:47539274-47539293 | MS.gene34618:intron | 40.0% |
!! | AAAAGCAGCAAAAGGCATTC+TGG | + | chr8.1:47540832-47540851 | MS.gene34618:intron | 40.0% |
!! | AAAGCAGCAAAAGGCATTCT+GGG | + | chr8.1:47540833-47540852 | MS.gene34618:intron | 40.0% |
!! | CAAAACATGGGTGCTGAATT+GGG | - | chr8.1:47541310-47541329 | None:intergenic | 40.0% |
!!! | CCTTTTGCTGCTTTTTCTTC+GGG | - | chr8.1:47540827-47540846 | None:intergenic | 40.0% |
!!! | GCCTTTTGCTGCTTTTTCTT+CGG | - | chr8.1:47540828-47540847 | None:intergenic | 40.0% |
!!! | GTGCCAAGATTTTGACTTGT+GGG | + | chr8.1:47540891-47540910 | MS.gene34618:intron | 40.0% |
AACTGTGGAAACGAAAGTGG+AGG | - | chr8.1:47540481-47540500 | None:intergenic | 45.0% | |
AAGTGAGGCCTTCAAGATTG+AGG | - | chr8.1:47538944-47538963 | None:intergenic | 45.0% | |
AATGAGACAGTGTTCGAGGA+TGG | - | chr8.1:47539018-47539037 | None:intergenic | 45.0% | |
AATGGGGAAACCCAAGAACA+TGG | + | chr8.1:47541238-47541257 | MS.gene34618:intron | 45.0% | |
ACATCAGTTAGCAGCATCAG+AGG | - | chr8.1:47539940-47539959 | None:intergenic | 45.0% | |
ACTGTGGAAACGAAAGTGGA+GGG | - | chr8.1:47540480-47540499 | None:intergenic | 45.0% | |
ATCCTCGAACACTGTCTCAT+TGG | + | chr8.1:47539017-47539036 | MS.gene34618:CDS | 45.0% | |
ATGAGACAGTGTTCGAGGAT+GGG | - | chr8.1:47539017-47539036 | None:intergenic | 45.0% | |
ATTACCATTCGCAGCTTGAG+AGG | - | chr8.1:47539701-47539720 | None:intergenic | 45.0% | |
CAAGAGAAAACGGTAGGACT+AGG | + | chr8.1:47541519-47541538 | MS.gene34618:intron | 45.0% | |
CCCGAAGAAAAAGCAGCAAA+AGG | + | chr8.1:47540824-47540843 | MS.gene34618:intron | 45.0% | |
CCTCCCACAAGTCAAAATCT+TGG | - | chr8.1:47540897-47540916 | None:intergenic | 45.0% | |
CTGGCTGCTGAAATTAATGC+TGG | + | chr8.1:47539847-47539866 | MS.gene34618:CDS | 45.0% | |
GACCTTCATCAGTCAAAGTG+AGG | - | chr8.1:47538959-47538978 | None:intergenic | 45.0% | |
GACTCCATTTCGAAGAGTCT+AGG | - | chr8.1:47539574-47539593 | None:intergenic | 45.0% | |
GCAGAACGTATTAAGGATGG+CGG | + | chr8.1:47539463-47539482 | MS.gene34618:intron | 45.0% | |
GCCATTCTTTCTTCAGAGGT+TGG | - | chr8.1:47539445-47539464 | None:intergenic | 45.0% | |
GGGTGCTAGTATCGTCTTTA+TGG | + | chr8.1:47539888-47539907 | MS.gene34618:CDS | 45.0% | |
GGTGTCTTGGAGCAAAAGAA+AGG | - | chr8.1:47540972-47540991 | None:intergenic | 45.0% | |
GGTTCGTTTCGCCTATTTCA+AGG | + | chr8.1:47539061-47539080 | MS.gene34618:CDS | 45.0% | |
GTGATTGAAACCCGTTTGAC+AGG | - | chr8.1:47539110-47539129 | None:intergenic | 45.0% | |
GTGATTGATCGTATTGCTCC+TGG | + | chr8.1:47539230-47539249 | MS.gene34618:intron | 45.0% | |
GTTAATCATCGTGTGGCGAA+TGG | + | chr8.1:47539326-47539345 | MS.gene34618:intron | 45.0% | |
TACTAGTGGTAAACTCGCAC+CGG | - | chr8.1:47540268-47540287 | None:intergenic | 45.0% | |
TCAGAGGTGACTGAGTTTGA+CGG | - | chr8.1:47539924-47539943 | None:intergenic | 45.0% | |
TCTCAAGCTGCGAATGGTAA+TGG | + | chr8.1:47539700-47539719 | MS.gene34618:CDS | 45.0% | |
TGGAGCAAAAGAAAGGAGTC+TGG | - | chr8.1:47540965-47540984 | None:intergenic | 45.0% | |
TTACCATTCGCAGCTTGAGA+GGG | - | chr8.1:47539700-47539719 | None:intergenic | 45.0% | |
! | AACTCGCACCGGACTTTTAT+CGG | - | chr8.1:47540257-47540276 | None:intergenic | 45.0% |
! | AGAATCAGTTTGGAACCACC+CGG | - | chr8.1:47541359-47541378 | None:intergenic | 45.0% |
! | CCAATTCAGCACCCATGTTT+TGG | + | chr8.1:47541308-47541327 | MS.gene34618:intron | 45.0% |
! | CCCAACCTCTGAAGAAAGAA+TGG | + | chr8.1:47539441-47539460 | MS.gene34618:intron | 45.0% |
! | CGAAAGCGGAGCTTTGATAT+TGG | - | chr8.1:47540413-47540432 | None:intergenic | 45.0% |
! | GGACTTTTATCGGAAAGGTG+AGG | - | chr8.1:47540247-47540266 | None:intergenic | 45.0% |
! | GTGTGTTTTGCTACCTGTGT+GGG | + | chr8.1:47539521-47539540 | MS.gene34618:intron | 45.0% |
! | TGAGAGGGCCTATTTGGAAT+CGG | - | chr8.1:47539685-47539704 | None:intergenic | 45.0% |
! | TGTGTTTTGCTACCTGTGTG+GGG | + | chr8.1:47539522-47539541 | MS.gene34618:intron | 45.0% |
!! | CCAAAACATGGGTGCTGAAT+TGG | - | chr8.1:47541311-47541330 | None:intergenic | 45.0% |
!!! | CCAAGATTTTGACTTGTGGG+AGG | + | chr8.1:47540894-47540913 | MS.gene34618:intron | 45.0% |
!!! | CGTGCCAAGATTTTGACTTG+TGG | + | chr8.1:47540890-47540909 | MS.gene34618:intron | 45.0% |
ACTGATGTGCCACGGTTGAT+AGG | + | chr8.1:47539952-47539971 | MS.gene34618:intron | 50.0% | |
AGACCAGTTCTACGGAGGAT+GGG | + | chr8.1:47539628-47539647 | MS.gene34618:CDS | 50.0% | |
CAGAGGTGACTGAGTTTGAC+GGG | - | chr8.1:47539923-47539942 | None:intergenic | 50.0% | |
CATCGTGTGGCGAATGGAAT+TGG | + | chr8.1:47539332-47539351 | MS.gene34618:intron | 50.0% | |
CTCGGAACGACCCAAAACAT+GGG | - | chr8.1:47541322-47541341 | None:intergenic | 50.0% | |
CTGCCCTAGACTCTTCGAAA+TGG | + | chr8.1:47539567-47539586 | MS.gene34618:intron | 50.0% | |
CTGGTCTCAGAAAATCTCCC+CGG | - | chr8.1:47539615-47539634 | None:intergenic | 50.0% | |
GAACCTGAACCCAAAAGTCG+AGG | - | chr8.1:47539286-47539305 | None:intergenic | 50.0% | |
GACCAATGAGACAGTGTTCG+AGG | - | chr8.1:47539022-47539041 | None:intergenic | 50.0% | |
GGCCTCACTTTGACTGATGA+AGG | + | chr8.1:47538954-47538973 | MS.gene34618:CDS | 50.0% | |
GGTGTGAATTCCTCTCAGCA+GGG | + | chr8.1:47539868-47539887 | MS.gene34618:CDS | 50.0% | |
GTTTCGCCTATTTCAAGGCG+AGG | + | chr8.1:47539066-47539085 | MS.gene34618:CDS | 50.0% | |
TAGACCGTGCACTTGTGGTT+CGG | - | chr8.1:47539978-47539997 | None:intergenic | 50.0% | |
TATGACCAATCACCCCACAC+AGG | - | chr8.1:47539537-47539556 | None:intergenic | 50.0% | |
TGAGACAGTGTTCGAGGATG+GGG | - | chr8.1:47539016-47539035 | None:intergenic | 50.0% | |
TGAGGTCATTTGCAGCCTTG+AGG | - | chr8.1:47538926-47538945 | None:intergenic | 50.0% | |
TGCTGCTAACTGATGTGCCA+CGG | + | chr8.1:47539944-47539963 | MS.gene34618:CDS | 50.0% | |
TGGGGTGGAGGAAGAGAATT+GGG | - | chr8.1:47538863-47538882 | None:intergenic | 50.0% | |
TGGTGTGAATTCCTCTCAGC+AGG | + | chr8.1:47539867-47539886 | MS.gene34618:CDS | 50.0% | |
TTCGATAGACCGTGCACTTG+TGG | - | chr8.1:47539983-47540002 | None:intergenic | 50.0% | |
TTGGGGTGGAGGAAGAGAAT+TGG | - | chr8.1:47538864-47538883 | None:intergenic | 50.0% | |
TTTCAGCAACAGCAGGGTCA+AGG | - | chr8.1:47538992-47539011 | None:intergenic | 50.0% | |
! | ACACTTGCTGGTACAACTCC+AGG | - | chr8.1:47539251-47539270 | None:intergenic | 50.0% |
! | ACTTTTGGCGCCCTGTCAAA+CGG | + | chr8.1:47539096-47539115 | MS.gene34618:CDS | 50.0% |
! | GAGTCTAGGGCAGCACTTAT+CGG | - | chr8.1:47539560-47539579 | None:intergenic | 50.0% |
! | GCACCGGACTTTTATCGGAA+AGG | - | chr8.1:47540252-47540271 | None:intergenic | 50.0% |
! | GGTGTGTTTTGCTACCTGTG+TGG | + | chr8.1:47539520-47539539 | MS.gene34618:intron | 50.0% |
!! | CAGGTTTTTAGGCGAGCTGA+AGG | + | chr8.1:47539355-47539374 | MS.gene34618:intron | 50.0% |
!! | GAGTCTGATGATGGTGTGAG+AGG | + | chr8.1:47539589-47539608 | MS.gene34618:CDS | 50.0% |
!! | GCTGCGAATGGTAATGGTAC+TGG | + | chr8.1:47539706-47539725 | MS.gene34618:CDS | 50.0% |
!! | TTCTGAGACCAGTTCTACGG+AGG | + | chr8.1:47539623-47539642 | MS.gene34618:CDS | 50.0% |
AACAGCAGGGTCAAGGTCGA+AGG | - | chr8.1:47538985-47539004 | None:intergenic | 55.0% | |
ACCCAGCCTCGCCTTGAAAT+AGG | - | chr8.1:47539075-47539094 | None:intergenic | 55.0% | |
ATGGGGGTTTCAGCAACAGC+AGG | - | chr8.1:47538999-47539018 | None:intergenic | 55.0% | |
CCTGAACCCAAAAGTCGAGG+TGG | - | chr8.1:47539283-47539302 | None:intergenic | 55.0% | |
CGGAAAGGTGAGGGGCTAAA+GGG | - | chr8.1:47540237-47540256 | None:intergenic | 55.0% | |
GAGACAGTGTTCGAGGATGG+GGG | - | chr8.1:47539015-47539034 | None:intergenic | 55.0% | |
GAGACCAGTTCTACGGAGGA+TGG | + | chr8.1:47539627-47539646 | MS.gene34618:CDS | 55.0% | |
GATACTAGCACCCTGCTGAG+AGG | - | chr8.1:47539881-47539900 | None:intergenic | 55.0% | |
GCAGCTTGAGAGGGCCTATT+TGG | - | chr8.1:47539691-47539710 | None:intergenic | 55.0% | |
GCCTATTTCAAGGCGAGGCT+GGG | + | chr8.1:47539071-47539090 | MS.gene34618:CDS | 55.0% | |
GCTCGGAACGACCCAAAACA+TGG | - | chr8.1:47541323-47541342 | None:intergenic | 55.0% | |
GTACCCATCCTCCGTAGAAC+TGG | - | chr8.1:47539634-47539653 | None:intergenic | 55.0% | |
GTGAGGGGCTAAAGGGAAAC+CGG | - | chr8.1:47540230-47540249 | None:intergenic | 55.0% | |
GTGTGGCGAATGGAATTGGC+AGG | + | chr8.1:47539336-47539355 | MS.gene34618:intron | 55.0% | |
TAGGCCGAACCACAAGTGCA+CGG | + | chr8.1:47539971-47539990 | MS.gene34618:intron | 55.0% | |
TCGGAAAGGTGAGGGGCTAA+AGG | - | chr8.1:47540238-47540257 | None:intergenic | 55.0% | |
TGCTACCTGTGTGGGGTGAT+TGG | + | chr8.1:47539529-47539548 | MS.gene34618:intron | 55.0% | |
TGGGGGTTTCAGCAACAGCA+GGG | - | chr8.1:47538998-47539017 | None:intergenic | 55.0% | |
TGTTCTGGTGCAACTCACCG+TGG | + | chr8.1:47541266-47541285 | MS.gene34618:intron | 55.0% | |
TTTGGGTCGTTCCGAGCATC+CGG | + | chr8.1:47541326-47541345 | MS.gene34618:intron | 55.0% | |
! | CGATGCCGCAAAGGTTCTAG+AGG | + | chr8.1:47539175-47539194 | MS.gene34618:CDS | 55.0% |
! | CTTTTGGCGCCCTGTCAAAC+GGG | + | chr8.1:47539097-47539116 | MS.gene34618:CDS | 55.0% |
!! | CTGATGATGGTGTGAGAGGC+CGG | + | chr8.1:47539593-47539612 | MS.gene34618:CDS | 55.0% |
!! | GAGTGCTGGTCCCTCTACTA+TGG | + | chr8.1:47539762-47539781 | MS.gene34618:CDS | 55.0% |
!! | GCAAAAGGCATTCTGGGAGG+TGG | + | chr8.1:47540839-47540858 | MS.gene34618:intron | 55.0% |
!! | GCAGCAAAAGGCATTCTGGG+AGG | + | chr8.1:47540836-47540855 | MS.gene34618:intron | 55.0% |
!! | GCCCTCCTCTAGAACCTTTG+CGG | - | chr8.1:47539183-47539202 | None:intergenic | 55.0% |
!! | GCCGCAAAGGTTCTAGAGGA+GGG | + | chr8.1:47539179-47539198 | MS.gene34618:CDS | 55.0% |
!! | TGATGATGGTGTGAGAGGCC+GGG | + | chr8.1:47539594-47539613 | MS.gene34618:CDS | 55.0% |
!! | TGCCGCAAAGGTTCTAGAGG+AGG | + | chr8.1:47539178-47539197 | MS.gene34618:CDS | 55.0% |
!!! | CCACCTCGACTTTTGGGTTC+AGG | + | chr8.1:47539280-47539299 | MS.gene34618:intron | 55.0% |
AACTCACCGTGGCGAGCTCA+CGG | + | chr8.1:47541277-47541296 | MS.gene34618:intron | 60.0% | |
AGGCCCTCTCAAGCTGCGAA+TGG | + | chr8.1:47539694-47539713 | MS.gene34618:CDS | 60.0% | |
CGCCTATTTCAAGGCGAGGC+TGG | + | chr8.1:47539070-47539089 | MS.gene34618:CDS | 60.0% | |
TTGGGTCGTTCCGAGCATCC+GGG | + | chr8.1:47541327-47541346 | MS.gene34618:intron | 60.0% | |
! | AGGCATTCTGGGAGGTGGCA+CGG | + | chr8.1:47540844-47540863 | MS.gene34618:intron | 60.0% |
! | CCTTTGCGGCATCGAGTCGA+TGG | - | chr8.1:47539169-47539188 | None:intergenic | 60.0% |
! | GATGATGGTGTGAGAGGCCG+GGG | + | chr8.1:47539595-47539614 | MS.gene34618:CDS | 60.0% |
! | GTGGTTCGGCCTATCAACCG+TGG | - | chr8.1:47539964-47539983 | None:intergenic | 60.0% |
!! | AGGCGAGGCTGGGTCACTTT+TGG | + | chr8.1:47539081-47539100 | MS.gene34618:CDS | 60.0% |
!! | AGGTTCTAGAGGAGGGCCCA+TGG | + | chr8.1:47539186-47539205 | MS.gene34618:CDS | 60.0% |
!! | CCATCGACTCGATGCCGCAA+AGG | + | chr8.1:47539166-47539185 | MS.gene34618:CDS | 60.0% |
AACTCGCCGTGAGCTCGCCA+CGG | - | chr8.1:47541286-47541305 | None:intergenic | 65.0% | |
CCGAGCATCCGGGGTCAATC+CGG | + | chr8.1:47541337-47541356 | MS.gene34618:intron | 65.0% | |
CCGGATTGACCCCGGATGCT+CGG | - | chr8.1:47541340-47541359 | None:intergenic | 65.0% | |
CGAGCATCCGGGGTCAATCC+GGG | + | chr8.1:47541338-47541357 | MS.gene34618:intron | 65.0% | |
GCACGGCCGTGCCACATGTT+GGG | + | chr8.1:47540861-47540880 | MS.gene34618:intron | 65.0% | |
GCCCGTCCCAACATGTGGCA+CGG | - | chr8.1:47540870-47540889 | None:intergenic | 65.0% | |
GCCGTGCCACATGTTGGGAC+GGG | + | chr8.1:47540866-47540885 | MS.gene34618:intron | 65.0% | |
GGAACCACCCGGATTGACCC+CGG | - | chr8.1:47541348-47541367 | None:intergenic | 65.0% | |
GGCCGTGCCACATGTTGGGA+CGG | + | chr8.1:47540865-47540884 | MS.gene34618:intron | 65.0% | |
TGGGTCGTTCCGAGCATCCG+GGG | + | chr8.1:47541328-47541347 | MS.gene34618:intron | 65.0% | |
GCACGGCCCGTCCCAACATG+TGG | - | chr8.1:47540875-47540894 | None:intergenic | 70.0% | |
GCATCCGGGGTCAATCCGGG+TGG | + | chr8.1:47541341-47541360 | MS.gene34618:intron | 70.0% | |
GGCACGGCCGTGCCACATGT+TGG | + | chr8.1:47540860-47540879 | MS.gene34618:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 47538834 | 47542151 | 47538834 | ID=MS.gene34618 |
chr8.1 | mRNA | 47538834 | 47542151 | 47538834 | ID=MS.gene34618.t1;Parent=MS.gene34618 |
chr8.1 | exon | 47538834 | 47539219 | 47538834 | ID=MS.gene34618.t1.exon1;Parent=MS.gene34618.t1 |
chr8.1 | CDS | 47538834 | 47539219 | 47538834 | ID=cds.MS.gene34618.t1;Parent=MS.gene34618.t1 |
chr8.1 | exon | 47539576 | 47539965 | 47539576 | ID=MS.gene34618.t1.exon2;Parent=MS.gene34618.t1 |
chr8.1 | CDS | 47539576 | 47539965 | 47539576 | ID=cds.MS.gene34618.t1;Parent=MS.gene34618.t1 |
chr8.1 | exon | 47542148 | 47542151 | 47542148 | ID=MS.gene34618.t1.exon3;Parent=MS.gene34618.t1 |
chr8.1 | CDS | 47542148 | 47542151 | 47542148 | ID=cds.MS.gene34618.t1;Parent=MS.gene34618.t1 |
Gene Sequence |
Protein sequence |