Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65471.t1 | KEH26371.1 | 41 | 524 | 226 | 9 | 1 | 497 | 22 | 489 | 1.10E-87 | 334.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65471.t1 | A0A072UAE7 | 41.0 | 524 | 226 | 9 | 1 | 497 | 22 | 489 | 7.7e-88 | 334.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65471.t1 | MTR_6g053230 | 42.337 | 522 | 222 | 8 | 1 | 497 | 22 | 489 | 3.91e-114 | 348 |
| MS.gene65471.t1 | MTR_3g024240 | 52.985 | 134 | 51 | 4 | 27 | 157 | 50 | 174 | 7.47e-37 | 135 |
| MS.gene65471.t1 | MTR_6g033215 | 32.124 | 193 | 90 | 2 | 5 | 157 | 103 | 294 | 2.52e-29 | 118 |
| MS.gene65471.t1 | MTR_8g463110 | 42.424 | 99 | 57 | 0 | 464 | 562 | 183 | 281 | 9.03e-21 | 96.7 |
| MS.gene65471.t1 | MTR_0015s0120 | 59.211 | 76 | 31 | 0 | 487 | 562 | 1 | 76 | 3.55e-20 | 92.8 |
| MS.gene65471.t1 | MTR_1g100687 | 38.947 | 95 | 58 | 0 | 468 | 562 | 125 | 219 | 9.89e-20 | 89.0 |
| MS.gene65471.t1 | MTR_0042s0130 | 41.748 | 103 | 60 | 0 | 460 | 562 | 218 | 320 | 1.37e-19 | 90.9 |
| MS.gene65471.t1 | MTR_6g034215 | 42.045 | 88 | 51 | 0 | 475 | 562 | 198 | 285 | 1.02e-17 | 84.7 |
| MS.gene65471.t1 | MTR_8g468010 | 51.667 | 60 | 29 | 0 | 77 | 136 | 5 | 64 | 5.07e-17 | 78.6 |
| MS.gene65471.t1 | MTR_4g020630 | 41.111 | 90 | 53 | 0 | 473 | 562 | 128 | 217 | 3.83e-15 | 78.6 |
| MS.gene65471.t1 | MTR_1g051330 | 35.354 | 99 | 63 | 1 | 463 | 561 | 337 | 434 | 2.52e-14 | 76.6 |
| MS.gene65471.t1 | MTR_6g053790 | 28.571 | 182 | 102 | 5 | 94 | 272 | 35 | 191 | 3.35e-14 | 74.3 |
| MS.gene65471.t1 | MTR_0010s0370 | 29.730 | 148 | 64 | 2 | 28 | 135 | 30 | 177 | 1.37e-12 | 67.0 |
| MS.gene65471.t1 | MTR_0010s0350 | 29.730 | 148 | 64 | 2 | 28 | 135 | 30 | 177 | 1.37e-12 | 67.0 |
| MS.gene65471.t1 | MTR_2g055450 | 36.634 | 101 | 49 | 1 | 462 | 562 | 237 | 322 | 3.21e-11 | 65.9 |
| MS.gene65471.t1 | MTR_6g009010 | 38.158 | 76 | 47 | 0 | 462 | 537 | 188 | 263 | 4.08e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 154 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATTGTTGCTCCTAGTATT+TGG | 0.192181 | 1.1:-26354257 | None:intergenic |
| TCACTTTCAGCAACTTAAAA+AGG | 0.220748 | 1.1:+26355734 | MS.gene65471:CDS |
| GATTGCACCCATTCAGCATT+TGG | 0.251219 | 1.1:-26354391 | None:intergenic |
| ATCAATTTGGCGACCTGGTC+AGG | 0.261092 | 1.1:+26353368 | MS.gene65471:CDS |
| CCCTTACCTTTGTCATTACT+TGG | 0.284571 | 1.1:-26354610 | None:intergenic |
| TTGCTACATCTGTGGCATAA+TGG | 0.300136 | 1.1:+26353809 | MS.gene65471:CDS |
| TATTGTTGCTCCTAGTATTT+GGG | 0.318741 | 1.1:-26354256 | None:intergenic |
| AGGAAAGATTACCATCAATT+TGG | 0.319616 | 1.1:+26353355 | MS.gene65471:CDS |
| TGCTACATCTGTGGCATAAT+GGG | 0.319954 | 1.1:+26353810 | MS.gene65471:CDS |
| TCATTACTTGGCAGTTCCTT+TGG | 0.323988 | 1.1:-26354598 | None:intergenic |
| ATCCTCCTCCGCGCAAAATT+CGG | 0.326845 | 1.1:-26354097 | None:intergenic |
| TCATAATAATGTTGTTGTTA+TGG | 0.328432 | 1.1:+26354040 | MS.gene65471:CDS |
| GCCTATCCGCTTCCAGTTCA+TGG | 0.339997 | 1.1:+26353332 | MS.gene65471:CDS |
| ATTGCACCCATTCAGCATTT+GGG | 0.340148 | 1.1:-26354390 | None:intergenic |
| GTCCTTCACCTCCTCCATTA+TGG | 0.352594 | 1.1:-26354154 | None:intergenic |
| CACACCAGCACCTTCATTCC+CGG | 0.353640 | 1.1:-26354755 | None:intergenic |
| TCACCAAATGGATCCTCAAC+TGG | 0.358593 | 1.1:+26353243 | MS.gene65471:CDS |
| ACTAATATCATTGGCCATAA+TGG | 0.359443 | 1.1:+26354140 | MS.gene65471:CDS |
| TGACAAAGGTAAGGGGAAAA+TGG | 0.367901 | 1.1:+26354618 | MS.gene65471:CDS |
| TCCCAACCTTTCGTATTTGA+AGG | 0.371814 | 1.1:-26353781 | None:intergenic |
| CTTGAACCAGGTTATGTTGA+TGG | 0.376890 | 1.1:+26353861 | MS.gene65471:CDS |
| CTGCTTGAACTCTGTGTTGT+AGG | 0.380766 | 1.1:+26353291 | MS.gene65471:CDS |
| AACGTAATCACTCTCGGTTC+AGG | 0.382873 | 1.1:+26355580 | MS.gene65471:CDS |
| GAGTATGTTGGTATGCTCAT+AGG | 0.384038 | 1.1:+26353606 | MS.gene65471:CDS |
| AGCAACAATAGCAACAATTC+AGG | 0.395323 | 1.1:+26354269 | MS.gene65471:CDS |
| TCTTCAATGAAGTTGAAGTC+TGG | 0.398848 | 1.1:+26353547 | MS.gene65471:CDS |
| AGTCATGTTACTTTGTGAAC+CGG | 0.405894 | 1.1:+26355545 | MS.gene65471:CDS |
| GTGGAGGTCGTACGGGCGGT+AGG | 0.422072 | 1.1:+26353982 | MS.gene65471:CDS |
| GTAATCTTTCCTCCATGAAC+TGG | 0.423372 | 1.1:-26353344 | None:intergenic |
| AATCTCAATGGTTCACCAAA+TGG | 0.424442 | 1.1:+26353231 | MS.gene65471:CDS |
| AATAATAAGTGGAATTCATA+TGG | 0.426425 | 1.1:+26355648 | MS.gene65471:CDS |
| GGTCGTACGGGCGGTAGGGC+AGG | 0.429440 | 1.1:+26353987 | MS.gene65471:CDS |
| CAGCAGATCCAAGGCTTTGA+GGG | 0.438287 | 1.1:+26354365 | MS.gene65471:CDS |
| AACACCATGCTTCGCTTCAA+CGG | 0.441845 | 1.1:-26353726 | None:intergenic |
| GTGCGGCTGACCTTACTGTT+TGG | 0.441917 | 1.1:+26355703 | MS.gene65471:CDS |
| TTAGTAGCAGTTAATTCAAA+AGG | 0.442093 | 1.1:-26354185 | None:intergenic |
| TAACCTGGTTCAAGTCTCCT+TGG | 0.445899 | 1.1:-26353852 | None:intergenic |
| TGACCAGGTCGCCAAATTGA+TGG | 0.454031 | 1.1:-26353366 | None:intergenic |
| GGCGAATGTATATGAGGATA+CGG | 0.455417 | 1.1:+26353682 | MS.gene65471:CDS |
| CCACTTGTTATTAGAGAAAG+AGG | 0.470113 | 1.1:+26354553 | MS.gene65471:CDS |
| GGCGGCGCGTGGAGGTCGTA+CGG | 0.472528 | 1.1:+26353974 | MS.gene65471:CDS |
| AATTTCAATGTCAATCTCAA+TGG | 0.474080 | 1.1:+26353219 | MS.gene65471:CDS |
| GACCCAGTTGAGGATCCATT+TGG | 0.474914 | 1.1:-26353246 | None:intergenic |
| ATGCTCATAGGGTGTCATAT+TGG | 0.476871 | 1.1:+26353618 | MS.gene65471:CDS |
| GCGGCGCGTGGAGGTCGTAC+GGG | 0.477552 | 1.1:+26353975 | MS.gene65471:CDS |
| ACAGTGAACAAGTGGCTTAG+AGG | 0.478508 | 1.1:+26353942 | MS.gene65471:CDS |
| GCAGCAGATCCAAGGCTTTG+AGG | 0.480866 | 1.1:+26354364 | MS.gene65471:CDS |
| GGCGGTAGGGCAGGTTCTGA+TGG | 0.483310 | 1.1:+26353996 | MS.gene65471:CDS |
| TTTAATAATAATAACATGAT+GGG | 0.483665 | 1.1:+26354452 | MS.gene65471:CDS |
| TTTGGGTCCCCTCAAAGCCT+TGG | 0.484855 | 1.1:-26354373 | None:intergenic |
| AGAATGGTTACTAATATCAT+TGG | 0.485905 | 1.1:+26354131 | MS.gene65471:CDS |
| AATGGGTGCAATCAAGAGAC+AGG | 0.487255 | 1.1:+26354401 | MS.gene65471:CDS |
| AACAAGGTCTAATGTTGTGC+AGG | 0.487621 | 1.1:+26354672 | MS.gene65471:CDS |
| TGATGGCATTAATGATCCTC+AGG | 0.491838 | 1.1:+26354013 | MS.gene65471:CDS |
| TCCTTCAAATACGAAAGGTT+GGG | 0.492877 | 1.1:+26353780 | MS.gene65471:CDS |
| GTGCGTATGAATATTGATAC+CGG | 0.494637 | 1.1:+26354736 | MS.gene65471:CDS |
| ATGCAGTTAGTCAATGGTAT+GGG | 0.495105 | 1.1:+26354230 | MS.gene65471:CDS |
| TCATAGGGTGTCATATTGGC+AGG | 0.495455 | 1.1:+26353622 | MS.gene65471:CDS |
| TTACGTTTCTGCCTCGGACC+CGG | 0.500397 | 1.1:-26355564 | None:intergenic |
| CTTCAATGAAGTTGAAGTCT+GGG | 0.501007 | 1.1:+26353548 | MS.gene65471:CDS |
| TCAATTTGGCGACCTGGTCA+GGG | 0.502279 | 1.1:+26353369 | MS.gene65471:CDS |
| TGAAGTTGAAGTCTGGGCTC+AGG | 0.504456 | 1.1:+26353554 | MS.gene65471:CDS |
| GTCCTTGGCGAATGTATATG+AGG | 0.506337 | 1.1:+26353676 | MS.gene65471:CDS |
| CTCCTTCAAATACGAAAGGT+TGG | 0.506466 | 1.1:+26353779 | MS.gene65471:CDS |
| GCCAAGTAATGACAAAGGTA+AGG | 0.506568 | 1.1:+26354609 | MS.gene65471:CDS |
| AGCTCAAGCTTATCAACAAT+AGG | 0.508384 | 1.1:-26355678 | None:intergenic |
| CTAGTTCCATCAACATAACC+TGG | 0.509907 | 1.1:-26353867 | None:intergenic |
| AACCTGGTTCAAGTCTCCTT+GGG | 0.511666 | 1.1:-26353851 | None:intergenic |
| TATGCAGTTAGTCAATGGTA+TGG | 0.512472 | 1.1:+26354229 | MS.gene65471:CDS |
| ACAATTTCCAGATGCAGTGT+TGG | 0.515779 | 1.1:+26355488 | MS.gene65471:CDS |
| TGGAGGTCGTACGGGCGGTA+GGG | 0.518346 | 1.1:+26353983 | MS.gene65471:CDS |
| ACTATTATGCAGTTAGTCAA+TGG | 0.518810 | 1.1:+26354224 | MS.gene65471:CDS |
| ATGTTGATGGAACTAGAGGA+TGG | 0.520215 | 1.1:+26353874 | MS.gene65471:CDS |
| AGGGGACCCAAATGCTGAAT+GGG | 0.523030 | 1.1:+26354384 | MS.gene65471:CDS |
| GTCTTTAAGAAGCTAGAGAT+AGG | 0.525612 | 1.1:+26353504 | MS.gene65471:intron |
| GGAGGAAGAGTGGCGGCGCG+TGG | 0.527888 | 1.1:+26353963 | MS.gene65471:CDS |
| AATATTGATACCGGGAATGA+AGG | 0.528790 | 1.1:+26354745 | MS.gene65471:CDS |
| GAGTGATTACGTTTCTGCCT+CGG | 0.529021 | 1.1:-26355570 | None:intergenic |
| TGTTGATGGAACTAGAGGAT+GGG | 0.531602 | 1.1:+26353875 | MS.gene65471:CDS |
| AATGAGTTGCAGCAGATCCA+AGG | 0.534984 | 1.1:+26354356 | MS.gene65471:CDS |
| GGCCATAATGGAGGAGGTGA+AGG | 0.535818 | 1.1:+26354152 | MS.gene65471:CDS |
| AAGCATGGTGTTCGAGAAAG+AGG | 0.536490 | 1.1:+26353737 | MS.gene65471:CDS |
| GAGGGGACCCAAATGCTGAA+TGG | 0.538608 | 1.1:+26354383 | MS.gene65471:CDS |
| AGTATGTTGGTATGCTCATA+GGG | 0.541005 | 1.1:+26353607 | MS.gene65471:CDS |
| TTACCATCAATTTGGCGACC+TGG | 0.542386 | 1.1:+26353363 | MS.gene65471:CDS |
| TTTCCTCCATGAACTGGAAG+CGG | 0.548484 | 1.1:-26353338 | None:intergenic |
| CACCAAATGGATCCTCAACT+GGG | 0.554114 | 1.1:+26353244 | MS.gene65471:CDS |
| CCAAGTAATGACAAAGGTAA+GGG | 0.563122 | 1.1:+26354610 | MS.gene65471:CDS |
| GTCATGTTACTTTGTGAACC+GGG | 0.564988 | 1.1:+26355546 | MS.gene65471:CDS |
| ACTGCGGGAGGAATAATAGC+TGG | 0.565575 | 1.1:+26354302 | MS.gene65471:CDS |
| CCTCTTTCTCTAATAACAAG+TGG | 0.566236 | 1.1:-26354553 | None:intergenic |
| ATCATTGGCCATAATGGAGG+AGG | 0.567978 | 1.1:+26354146 | MS.gene65471:CDS |
| GCGCCCTTGCAACAGATGCA+TGG | 0.571252 | 1.1:+26355460 | MS.gene65471:intron |
| ACACCGATGCTTTCTGCCCA+AGG | 0.571909 | 1.1:+26353835 | MS.gene65471:CDS |
| CATACTCGTTCATGTAACCA+TGG | 0.575372 | 1.1:-26353590 | None:intergenic |
| CAATTTGGCGACCTGGTCAG+GGG | 0.575886 | 1.1:+26353370 | MS.gene65471:CDS |
| GCGAATGTATATGAGGATAC+GGG | 0.576922 | 1.1:+26353683 | MS.gene65471:CDS |
| TAGTGATCAGAGGAAGGTGC+TGG | 0.578883 | 1.1:-26355519 | None:intergenic |
| TGCAGTTAGTCAATGGTATG+GGG | 0.582787 | 1.1:+26354231 | MS.gene65471:CDS |
| GTTGATGGAACTAGAGGATG+GGG | 0.583044 | 1.1:+26353876 | MS.gene65471:CDS |
| GTTGCTAGTAACAATGTTGG+AGG | 0.584267 | 1.1:+26354694 | MS.gene65471:CDS |
| ATGTCTCCTTCAAATACGAA+AGG | 0.591107 | 1.1:+26353775 | MS.gene65471:CDS |
| TCCATGAACTGGAAGCGGAT+AGG | 0.591288 | 1.1:-26353333 | None:intergenic |
| ATACTCGTTCATGTAACCAT+GGG | 0.591871 | 1.1:-26353589 | None:intergenic |
| GGCAGAAACGTAATCACTCT+CGG | 0.591926 | 1.1:+26355574 | MS.gene65471:CDS |
| TGGAGGAGGTGAAGGACAGT+GGG | 0.596064 | 1.1:+26354160 | MS.gene65471:CDS |
| CAGGTTGCTAGTAACAATGT+TGG | 0.597625 | 1.1:+26354691 | MS.gene65471:CDS |
| TACTTTGTGAACCGGGTCCG+AGG | 0.599195 | 1.1:+26355553 | MS.gene65471:CDS |
| GGTTCACAAAGTAACATGAC+TGG | 0.600785 | 1.1:-26355543 | None:intergenic |
| TCTCCTTGGGCAGAAAGCAT+CGG | 0.601920 | 1.1:-26353838 | None:intergenic |
| GTTCGAGAAAGAGGATGGTA+CGG | 0.602893 | 1.1:+26353746 | MS.gene65471:CDS |
| GTGGCTTAGAGGAGGAAGAG+TGG | 0.602950 | 1.1:+26353953 | MS.gene65471:CDS |
| GTTGGAGGAGCAGCTGAACA+AGG | 0.603670 | 1.1:+26354709 | MS.gene65471:CDS |
| TGCCCAAGGAGACTTGAACC+AGG | 0.606980 | 1.1:+26353849 | MS.gene65471:CDS |
| TATTTCAGAGGACCCAGTTG+AGG | 0.610000 | 1.1:-26353256 | None:intergenic |
| TGCTTCATGTGATATTTCAG+AGG | 0.614016 | 1.1:-26353268 | None:intergenic |
| TGCTATTACTGACAAACCAA+AGG | 0.615111 | 1.1:+26354582 | MS.gene65471:CDS |
| GGTAAGGGGAAAATGGAAGA+TGG | 0.615565 | 1.1:+26354625 | MS.gene65471:CDS |
| GCGCGTGGAGGTCGTACGGG+CGG | 0.616691 | 1.1:+26353978 | MS.gene65471:CDS |
| AATATCATTGGCCATAATGG+AGG | 0.617996 | 1.1:+26354143 | MS.gene65471:CDS |
| TCAGGCGTGACAGTTACTGC+GGG | 0.618529 | 1.1:+26354287 | MS.gene65471:CDS |
| AGCAGATCCAAGGCTTTGAG+GGG | 0.620452 | 1.1:+26354366 | MS.gene65471:CDS |
| ATGGAGGAGGTGAAGGACAG+TGG | 0.621770 | 1.1:+26354159 | MS.gene65471:CDS |
| GGAAGAGTGGCGGCGCGTGG+AGG | 0.623952 | 1.1:+26353966 | MS.gene65471:CDS |
| GGTTATGTTGATGGAACTAG+AGG | 0.624826 | 1.1:+26353870 | MS.gene65471:CDS |
| GTGAACAAGTGGCTTAGAGG+AGG | 0.627698 | 1.1:+26353945 | MS.gene65471:CDS |
| ATGGTGTTCGAGAAAGAGGA+TGG | 0.629171 | 1.1:+26353741 | MS.gene65471:CDS |
| GGCGTGACAGTTACTGCGGG+AGG | 0.633748 | 1.1:+26354290 | MS.gene65471:CDS |
| ATAATAGCTGGAAGTCAACA+AGG | 0.635798 | 1.1:+26354314 | MS.gene65471:CDS |
| TGCGTATGAATATTGATACC+GGG | 0.636022 | 1.1:+26354737 | MS.gene65471:CDS |
| TTCAGGCGTGACAGTTACTG+CGG | 0.637691 | 1.1:+26354286 | MS.gene65471:CDS |
| CAAGTAATGACAAAGGTAAG+GGG | 0.639778 | 1.1:+26354611 | MS.gene65471:CDS |
| GGTTACATGAACGAGTATGT+TGG | 0.643295 | 1.1:+26353594 | MS.gene65471:CDS |
| ACTGGATAGTGATCAGAGGA+AGG | 0.647314 | 1.1:-26355525 | None:intergenic |
| GATACCGGGAATGAAGGTGC+TGG | 0.650994 | 1.1:+26354751 | MS.gene65471:CDS |
| GTAATGTTACAGTGAACAAG+TGG | 0.652984 | 1.1:+26353934 | MS.gene65471:CDS |
| ATCCTCATATACATTCGCCA+AGG | 0.654983 | 1.1:-26353678 | None:intergenic |
| AGGCGAGGCTATCTCTGAGG+TGG | 0.655236 | 1.1:+26353524 | MS.gene65471:CDS |
| ACATTATTATGATGTTCCTG+AGG | 0.656936 | 1.1:-26354029 | None:intergenic |
| TGATAAGCTTGAGCTATGTG+CGG | 0.667994 | 1.1:+26355686 | MS.gene65471:CDS |
| AATTTGGCGACCTGGTCAGG+GGG | 0.672524 | 1.1:+26353371 | MS.gene65471:CDS |
| GCAGTTAGTCAATGGTATGG+GGG | 0.673667 | 1.1:+26354232 | MS.gene65471:CDS |
| CATGACTGGATAGTGATCAG+AGG | 0.674315 | 1.1:-26355529 | None:intergenic |
| GCTTAGAGGAGGAAGAGTGG+CGG | 0.677022 | 1.1:+26353956 | MS.gene65471:CDS |
| ATGGGTGCAATCAAGAGACA+GGG | 0.687518 | 1.1:+26354402 | MS.gene65471:CDS |
| AATGTATATGAGGATACGGG+TGG | 0.688504 | 1.1:+26353686 | MS.gene65471:CDS |
| GAACTGCCAAGTAATGACAA+AGG | 0.690199 | 1.1:+26354604 | MS.gene65471:CDS |
| TGAACCGTTGAAGCGAAGCA+TGG | 0.703453 | 1.1:+26353722 | MS.gene65471:CDS |
| TAAGAAGCTAGAGATAGGCG+AGG | 0.711724 | 1.1:+26353509 | MS.gene65471:intron |
| GATAGGCGAGGCTATCTCTG+AGG | 0.715135 | 1.1:+26353521 | MS.gene65471:CDS |
| GATGGGTGAGACTTCAGTGT+GGG | 0.716952 | 1.1:+26354469 | MS.gene65471:CDS |
| TACTCGTTCATGTAACCATG+GGG | 0.727613 | 1.1:-26353588 | None:intergenic |
| TATCCGCTTCCAGTTCATGG+AGG | 0.761704 | 1.1:+26353335 | MS.gene65471:CDS |
| TGATGGGTGAGACTTCAGTG+TGG | 0.821684 | 1.1:+26354468 | MS.gene65471:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAATAATAATAACATGAT+GGG | + | chr1.1:26354452-26354471 | MS.gene65471:CDS | 10.0% |
| !!! | AAAATTTTGTTAATAATAAG+TGG | + | chr1.1:26355637-26355656 | MS.gene65471:CDS | 10.0% |
| !!! | TTTTAATAATAATAACATGA+TGG | + | chr1.1:26354451-26354470 | MS.gene65471:CDS | 10.0% |
| !!! | ACAACATTTTCAAAAAATAA+AGG | - | chr1.1:26354811-26354830 | None:intergenic | 15.0% |
| !!! | ATTTTTTGAAAATGTTGTAA+TGG | + | chr1.1:26354813-26354832 | MS.gene65471:intron | 15.0% |
| !!! | TATTTCTAATGCTAATAAAA+CGG | + | chr1.1:26354977-26354996 | MS.gene65471:intron | 15.0% |
| !! | AATAATAAGTGGAATTCATA+TGG | + | chr1.1:26355648-26355667 | MS.gene65471:CDS | 20.0% |
| !!! | TCATAATAATGTTGTTGTTA+TGG | + | chr1.1:26354040-26354059 | MS.gene65471:CDS | 20.0% |
| !!! | TTAACAAAATTTTTGAACTC+TGG | - | chr1.1:26355630-26355649 | None:intergenic | 20.0% |
| !!! | TTTGATGAAAGCAATTTTTA+TGG | + | chr1.1:26353654-26353673 | MS.gene65471:CDS | 20.0% |
| !!! | TTTTTTCCTTTCTTTTCATT+AGG | - | chr1.1:26355299-26355318 | None:intergenic | 20.0% |
| ! | AAAAAAATGAAAGAGCGAAT+TGG | + | chr1.1:26355313-26355332 | MS.gene65471:intron | 25.0% |
| ! | AATTTCAATGTCAATCTCAA+TGG | + | chr1.1:26353219-26353238 | MS.gene65471:CDS | 25.0% |
| ! | AGAATGGTTACTAATATCAT+TGG | + | chr1.1:26354131-26354150 | MS.gene65471:CDS | 25.0% |
| ! | ATTCATGATAGAACTGAAAA+TGG | - | chr1.1:26353428-26353447 | None:intergenic | 25.0% |
| ! | CAAAAATGAAGAAAAGAACA+AGG | + | chr1.1:26354656-26354675 | MS.gene65471:CDS | 25.0% |
| ! | GAAGTTATAGATGATAACAA+AGG | + | chr1.1:26355137-26355156 | MS.gene65471:intron | 25.0% |
| ! | TTAGTAGCAGTTAATTCAAA+AGG | - | chr1.1:26354188-26354207 | None:intergenic | 25.0% |
| ! | TTCATGATAGAACTGAAAAT+GGG | - | chr1.1:26353427-26353446 | None:intergenic | 25.0% |
| !! | ATTCCAACTAATCATTTTCA+TGG | - | chr1.1:26354868-26354887 | None:intergenic | 25.0% |
| !! | ATTTTCAGTTCTATCATGAA+TGG | + | chr1.1:26353427-26353446 | MS.gene65471:intron | 25.0% |
| !! | TTTTCAGTTCTATCATGAAT+GGG | + | chr1.1:26353428-26353447 | MS.gene65471:intron | 25.0% |
| !!! | TTTTGAAAATGTTGTAATGG+CGG | + | chr1.1:26354816-26354835 | MS.gene65471:intron | 25.0% |
| AAATAGTCTCACAAAGAAAG+AGG | - | chr1.1:26354962-26354981 | None:intergenic | 30.0% | |
| AAGATAAAACTCTGCCTATA+AGG | + | chr1.1:26354515-26354534 | MS.gene65471:intron | 30.0% | |
| ACATTATTATGATGTTCCTG+AGG | - | chr1.1:26354032-26354051 | None:intergenic | 30.0% | |
| ACTAATATCATTGGCCATAA+TGG | + | chr1.1:26354140-26354159 | MS.gene65471:CDS | 30.0% | |
| ACTATTATGCAGTTAGTCAA+TGG | + | chr1.1:26354224-26354243 | MS.gene65471:CDS | 30.0% | |
| AGAGCGAATTGGTTAATAAA+TGG | + | chr1.1:26355324-26355343 | MS.gene65471:intron | 30.0% | |
| AGGAAAGATTACCATCAATT+TGG | + | chr1.1:26353355-26353374 | MS.gene65471:CDS | 30.0% | |
| CAAACTCATCAAATTTACCT+TGG | + | chr1.1:26355240-26355259 | MS.gene65471:intron | 30.0% | |
| CTGAAGGTTATTTGTATACT+TGG | + | chr1.1:26355391-26355410 | MS.gene65471:intron | 30.0% | |
| GTATATCATTAAAGTCACCA+AGG | - | chr1.1:26355271-26355290 | None:intergenic | 30.0% | |
| TAGATGATAACAAAGGAAAG+TGG | + | chr1.1:26355144-26355163 | MS.gene65471:intron | 30.0% | |
| TAGGAAAGAGTTCTACAAAA+CGG | + | chr1.1:26353453-26353472 | MS.gene65471:intron | 30.0% | |
| TATACTTGGTTCAAATGTCT+TGG | + | chr1.1:26355405-26355424 | MS.gene65471:intron | 30.0% | |
| TATTGTTGCTCCTAGTATTT+GGG | - | chr1.1:26354259-26354278 | None:intergenic | 30.0% | |
| TCACTTTCAGCAACTTAAAA+AGG | + | chr1.1:26355734-26355753 | MS.gene65471:CDS | 30.0% | |
| TTAAACTAGGAATTGTACGA+GGG | - | chr1.1:26354908-26354927 | None:intergenic | 30.0% | |
| TTCTAATGCTAATAAAACGG+AGG | + | chr1.1:26354980-26354999 | MS.gene65471:intron | 30.0% | |
| TTTAAACTAGGAATTGTACG+AGG | - | chr1.1:26354909-26354928 | None:intergenic | 30.0% | |
| ! | AAAGCAATTTTTATGGTCCT+TGG | + | chr1.1:26353661-26353680 | MS.gene65471:CDS | 30.0% |
| ! | ATGATTAGTTGGAATTGTAG+AGG | + | chr1.1:26354873-26354892 | MS.gene65471:intron | 30.0% |
| !! | AGGATTTACTTTTCACAGAA+TGG | + | chr1.1:26354115-26354134 | MS.gene65471:CDS | 30.0% |
| !! | CTTTTCTTCATTTTTGTAGC+TGG | - | chr1.1:26354652-26354671 | None:intergenic | 30.0% |
| !!! | GATTTTGATTCCAAACAGTA+AGG | - | chr1.1:26355716-26355735 | None:intergenic | 30.0% |
| AATATCATTGGCCATAATGG+AGG | + | chr1.1:26354143-26354162 | MS.gene65471:CDS | 35.0% | |
| AATATTGATACCGGGAATGA+AGG | + | chr1.1:26354745-26354764 | MS.gene65471:CDS | 35.0% | |
| AATCTCAATGGTTCACCAAA+TGG | + | chr1.1:26353231-26353250 | MS.gene65471:CDS | 35.0% | |
| AGCAACAATAGCAACAATTC+AGG | + | chr1.1:26354269-26354288 | MS.gene65471:CDS | 35.0% | |
| AGCTCAAGCTTATCAACAAT+AGG | - | chr1.1:26355681-26355700 | None:intergenic | 35.0% | |
| AGTATGTTGGTATGCTCATA+GGG | + | chr1.1:26353607-26353626 | MS.gene65471:CDS | 35.0% | |
| AGTTGGAATTGTAGAGGTTT+AGG | + | chr1.1:26354879-26354898 | MS.gene65471:intron | 35.0% | |
| ATAATAGCTGGAAGTCAACA+AGG | + | chr1.1:26354314-26354333 | MS.gene65471:CDS | 35.0% | |
| ATACTCGTTCATGTAACCAT+GGG | - | chr1.1:26353592-26353611 | None:intergenic | 35.0% | |
| ATGCAGTTAGTCAATGGTAT+GGG | + | chr1.1:26354230-26354249 | MS.gene65471:CDS | 35.0% | |
| ATGTCTCCTTCAAATACGAA+AGG | + | chr1.1:26353775-26353794 | MS.gene65471:CDS | 35.0% | |
| CAAGTAATGACAAAGGTAAG+GGG | + | chr1.1:26354611-26354630 | MS.gene65471:CDS | 35.0% | |
| CCAAGTAATGACAAAGGTAA+GGG | + | chr1.1:26354610-26354629 | MS.gene65471:CDS | 35.0% | |
| CCTCTTTCTCTAATAACAAG+TGG | - | chr1.1:26354556-26354575 | None:intergenic | 35.0% | |
| CTATTGTTGCTCCTAGTATT+TGG | - | chr1.1:26354260-26354279 | None:intergenic | 35.0% | |
| CTTCAATGAAGTTGAAGTCT+GGG | + | chr1.1:26353548-26353567 | MS.gene65471:CDS | 35.0% | |
| CTTTCGCCTAATGAAAAGAA+AGG | + | chr1.1:26355290-26355309 | MS.gene65471:intron | 35.0% | |
| GAGCCATGAAAATGATTAGT+TGG | + | chr1.1:26354862-26354881 | MS.gene65471:intron | 35.0% | |
| GGAGGAATTAAAATATGTGC+TGG | + | chr1.1:26354998-26355017 | MS.gene65471:intron | 35.0% | |
| GTAATGTTACAGTGAACAAG+TGG | + | chr1.1:26353934-26353953 | MS.gene65471:CDS | 35.0% | |
| GTGCGTATGAATATTGATAC+CGG | + | chr1.1:26354736-26354755 | MS.gene65471:CDS | 35.0% | |
| TATGCAGTTAGTCAATGGTA+TGG | + | chr1.1:26354229-26354248 | MS.gene65471:CDS | 35.0% | |
| TCCTTCAAATACGAAAGGTT+GGG | + | chr1.1:26353780-26353799 | MS.gene65471:CDS | 35.0% | |
| TCTTCAATGAAGTTGAAGTC+TGG | + | chr1.1:26353547-26353566 | MS.gene65471:CDS | 35.0% | |
| TGATGGAAAACCATAGTAAC+CGG | - | chr1.1:26355177-26355196 | None:intergenic | 35.0% | |
| TGCGTATGAATATTGATACC+GGG | + | chr1.1:26354737-26354756 | MS.gene65471:CDS | 35.0% | |
| TGCTATTACTGACAAACCAA+AGG | + | chr1.1:26354582-26354601 | MS.gene65471:CDS | 35.0% | |
| TGCTTCATGTGATATTTCAG+AGG | - | chr1.1:26353271-26353290 | None:intergenic | 35.0% | |
| TTATCAGATGTTCACACTGA+AGG | + | chr1.1:26355375-26355394 | MS.gene65471:intron | 35.0% | |
| ! | AAATTTTCCAACACTGCATC+TGG | - | chr1.1:26355498-26355517 | None:intergenic | 35.0% |
| ! | ACTATGGTTTTCCATCACAT+GGG | + | chr1.1:26355180-26355199 | MS.gene65471:intron | 35.0% |
| ! | CTAATCATTTTCATGGCTCT+TGG | - | chr1.1:26354861-26354880 | None:intergenic | 35.0% |
| ! | GTCTTTAAGAAGCTAGAGAT+AGG | + | chr1.1:26353504-26353523 | MS.gene65471:intron | 35.0% |
| ! | TACTATGGTTTTCCATCACA+TGG | + | chr1.1:26355179-26355198 | MS.gene65471:intron | 35.0% |
| !! | AGTCATGTTACTTTGTGAAC+CGG | + | chr1.1:26355545-26355564 | MS.gene65471:CDS | 35.0% |
| !! | CCACTTGTTATTAGAGAAAG+AGG | + | chr1.1:26354553-26354572 | MS.gene65471:CDS | 35.0% |
| !! | TGGACGAGGTATTTTAAACT+AGG | - | chr1.1:26354921-26354940 | None:intergenic | 35.0% |
| !!! | GACTTTTGATGGATTTTTGC+TGG | + | chr1.1:26353482-26353501 | MS.gene65471:intron | 35.0% |
| AACAAGGTCTAATGTTGTGC+AGG | + | chr1.1:26354672-26354691 | MS.gene65471:CDS | 40.0% | |
| AACATCTGATAAACCCGCAT+CGG | - | chr1.1:26355367-26355386 | None:intergenic | 40.0% | |
| AATGTATATGAGGATACGGG+TGG | + | chr1.1:26353686-26353705 | MS.gene65471:CDS | 40.0% | |
| ACAATTTCCAGATGCAGTGT+TGG | + | chr1.1:26355488-26355507 | MS.gene65471:CDS | 40.0% | |
| ATCCTCATATACATTCGCCA+AGG | - | chr1.1:26353681-26353700 | None:intergenic | 40.0% | |
| ATTGCACCCATTCAGCATTT+GGG | - | chr1.1:26354393-26354412 | None:intergenic | 40.0% | |
| CAGGTTGCTAGTAACAATGT+TGG | + | chr1.1:26354691-26354710 | MS.gene65471:CDS | 40.0% | |
| CATACTCGTTCATGTAACCA+TGG | - | chr1.1:26353593-26353612 | None:intergenic | 40.0% | |
| CCCTTACCTTTGTCATTACT+TGG | - | chr1.1:26354613-26354632 | None:intergenic | 40.0% | |
| CCTCGTCCAAGTTTATAAAC+CGG | + | chr1.1:26354932-26354951 | MS.gene65471:intron | 40.0% | |
| CTAGTTCCATCAACATAACC+TGG | - | chr1.1:26353870-26353889 | None:intergenic | 40.0% | |
| CTCCTTCAAATACGAAAGGT+TGG | + | chr1.1:26353779-26353798 | MS.gene65471:CDS | 40.0% | |
| CTTGAACCAGGTTATGTTGA+TGG | + | chr1.1:26353861-26353880 | MS.gene65471:CDS | 40.0% | |
| GAACTCTGGATCAAAAAGCA+AGG | - | chr1.1:26355616-26355635 | None:intergenic | 40.0% | |
| GAACTGCCAAGTAATGACAA+AGG | + | chr1.1:26354604-26354623 | MS.gene65471:CDS | 40.0% | |
| GAGATGCATGGAACTTTCTT+AGG | + | chr1.1:26355210-26355229 | MS.gene65471:intron | 40.0% | |
| GAGTATGTTGGTATGCTCAT+AGG | + | chr1.1:26353606-26353625 | MS.gene65471:CDS | 40.0% | |
| GAGTTCTACAAAACGGTCTT+TGG | + | chr1.1:26353460-26353479 | MS.gene65471:intron | 40.0% | |
| GATAGAACTGAAAATGGGAC+CGG | - | chr1.1:26353422-26353441 | None:intergenic | 40.0% | |
| GCCAAGTAATGACAAAGGTA+AGG | + | chr1.1:26354609-26354628 | MS.gene65471:CDS | 40.0% | |
| GCGAATGTATATGAGGATAC+GGG | + | chr1.1:26353683-26353702 | MS.gene65471:CDS | 40.0% | |
| GGACATCCGGTTTATAAACT+TGG | - | chr1.1:26354941-26354960 | None:intergenic | 40.0% | |
| GGCGAATGTATATGAGGATA+CGG | + | chr1.1:26353682-26353701 | MS.gene65471:CDS | 40.0% | |
| GGTTACATGAACGAGTATGT+TGG | + | chr1.1:26353594-26353613 | MS.gene65471:CDS | 40.0% | |
| GGTTCACAAAGTAACATGAC+TGG | - | chr1.1:26355546-26355565 | None:intergenic | 40.0% | |
| GTAATCTTTCCTCCATGAAC+TGG | - | chr1.1:26353347-26353366 | None:intergenic | 40.0% | |
| GTTCTATCATGAATGGGACT+AGG | + | chr1.1:26353434-26353453 | MS.gene65471:intron | 40.0% | |
| GTTGCTAGTAACAATGTTGG+AGG | + | chr1.1:26354694-26354713 | MS.gene65471:CDS | 40.0% | |
| TACTCGTTCATGTAACCATG+GGG | - | chr1.1:26353591-26353610 | None:intergenic | 40.0% | |
| TCACAAAGAAAGAGGACATC+CGG | - | chr1.1:26354954-26354973 | None:intergenic | 40.0% | |
| TCATTACTTGGCAGTTCCTT+TGG | - | chr1.1:26354601-26354620 | None:intergenic | 40.0% | |
| TCCCAACCTTTCGTATTTGA+AGG | - | chr1.1:26353784-26353803 | None:intergenic | 40.0% | |
| TGAAAATGTTGTAATGGCGG+AGG | + | chr1.1:26354819-26354838 | MS.gene65471:intron | 40.0% | |
| TGACAAAGGTAAGGGGAAAA+TGG | + | chr1.1:26354618-26354637 | MS.gene65471:CDS | 40.0% | |
| TGATAAGCTTGAGCTATGTG+CGG | + | chr1.1:26355686-26355705 | MS.gene65471:CDS | 40.0% | |
| TGATGGCATTAATGATCCTC+AGG | + | chr1.1:26354013-26354032 | MS.gene65471:CDS | 40.0% | |
| TGCAGTTAGTCAATGGTATG+GGG | + | chr1.1:26354231-26354250 | MS.gene65471:CDS | 40.0% | |
| TGCTACATCTGTGGCATAAT+GGG | + | chr1.1:26353810-26353829 | MS.gene65471:CDS | 40.0% | |
| TTGCTACATCTGTGGCATAA+TGG | + | chr1.1:26353809-26353828 | MS.gene65471:CDS | 40.0% | |
| ! | AACGGTCTTTGGACTTTTGA+TGG | + | chr1.1:26353471-26353490 | MS.gene65471:intron | 40.0% |
| ! | AATTTACCTTGGTGCATCCT+TGG | + | chr1.1:26355251-26355270 | MS.gene65471:intron | 40.0% |
| ! | ATCATTTTCATGGCTCTTGG+CGG | - | chr1.1:26354858-26354877 | None:intergenic | 40.0% |
| ! | ATGCTCATAGGGTGTCATAT+TGG | + | chr1.1:26353618-26353637 | MS.gene65471:CDS | 40.0% |
| ! | ATGTTGATGGAACTAGAGGA+TGG | + | chr1.1:26353874-26353893 | MS.gene65471:CDS | 40.0% |
| ! | CAGGTTTTTAATCTTCCCCA+TGG | + | chr1.1:26353573-26353592 | MS.gene65471:CDS | 40.0% |
| ! | GGTTATGTTGATGGAACTAG+AGG | + | chr1.1:26353870-26353889 | MS.gene65471:CDS | 40.0% |
| ! | TGTTGATGGAACTAGAGGAT+GGG | + | chr1.1:26353875-26353894 | MS.gene65471:CDS | 40.0% |
| ! | TGTTTTACTGTTGATCGCCA+AGG | + | chr1.1:26355032-26355051 | MS.gene65471:intron | 40.0% |
| !! | GGAGTATTTTGCTACATCTG+TGG | + | chr1.1:26353801-26353820 | MS.gene65471:CDS | 40.0% |
| !! | GGGGTCATTTTCTGAATGAT+GGG | + | chr1.1:26353895-26353914 | MS.gene65471:CDS | 40.0% |
| !! | GGGTCATTTTCTGAATGATG+GGG | + | chr1.1:26353896-26353915 | MS.gene65471:CDS | 40.0% |
| !! | GGTCATTTTCTGAATGATGG+GGG | + | chr1.1:26353897-26353916 | MS.gene65471:CDS | 40.0% |
| !! | GTCATGTTACTTTGTGAACC+GGG | + | chr1.1:26355546-26355565 | MS.gene65471:CDS | 40.0% |
| !! | GTGGTGGTCTTGTTCTTTAT+TGG | + | chr1.1:26355060-26355079 | MS.gene65471:intron | 40.0% |
| !! | TGGGGTCATTTTCTGAATGA+TGG | + | chr1.1:26353894-26353913 | MS.gene65471:CDS | 40.0% |
| AACACCATGCTTCGCTTCAA+CGG | - | chr1.1:26353729-26353748 | None:intergenic | 45.0% | |
| AACCTGGTTCAAGTCTCCTT+GGG | - | chr1.1:26353854-26353873 | None:intergenic | 45.0% | |
| AACGTAATCACTCTCGGTTC+AGG | + | chr1.1:26355580-26355599 | MS.gene65471:CDS | 45.0% | |
| AACTCTGCCTATAAGGCCTA+TGG | + | chr1.1:26354522-26354541 | MS.gene65471:intron | 45.0% | |
| AAGCATGGTGTTCGAGAAAG+AGG | + | chr1.1:26353737-26353756 | MS.gene65471:CDS | 45.0% | |
| AATGAGTTGCAGCAGATCCA+AGG | + | chr1.1:26354356-26354375 | MS.gene65471:CDS | 45.0% | |
| AATGGGTGCAATCAAGAGAC+AGG | + | chr1.1:26354401-26354420 | MS.gene65471:CDS | 45.0% | |
| ACAGTGAACAAGTGGCTTAG+AGG | + | chr1.1:26353942-26353961 | MS.gene65471:CDS | 45.0% | |
| ACTGGATAGTGATCAGAGGA+AGG | - | chr1.1:26355528-26355547 | None:intergenic | 45.0% | |
| ATGGGTGCAATCAAGAGACA+GGG | + | chr1.1:26354402-26354421 | MS.gene65471:CDS | 45.0% | |
| ATGGTGTTCGAGAAAGAGGA+TGG | + | chr1.1:26353741-26353760 | MS.gene65471:CDS | 45.0% | |
| CAAGTCTCTCTTCTACAGCT+CGG | - | chr1.1:26355437-26355456 | None:intergenic | 45.0% | |
| CACCAAATGGATCCTCAACT+GGG | + | chr1.1:26353244-26353263 | MS.gene65471:CDS | 45.0% | |
| CATGACTGGATAGTGATCAG+AGG | - | chr1.1:26355532-26355551 | None:intergenic | 45.0% | |
| CCGGTTTATAAACTTGGACG+AGG | - | chr1.1:26354935-26354954 | None:intergenic | 45.0% | |
| CCTATAAGGCCTATGGTACA+GGG | + | chr1.1:26354529-26354548 | MS.gene65471:intron | 45.0% | |
| CTGCTTGAACTCTGTGTTGT+AGG | + | chr1.1:26353291-26353310 | MS.gene65471:CDS | 45.0% | |
| GAGTGATTACGTTTCTGCCT+CGG | - | chr1.1:26355573-26355592 | None:intergenic | 45.0% | |
| GATTGCACCCATTCAGCATT+TGG | - | chr1.1:26354394-26354413 | None:intergenic | 45.0% | |
| GCAGTTAGTCAATGGTATGG+GGG | + | chr1.1:26354232-26354251 | MS.gene65471:CDS | 45.0% | |
| GGCAGAAACGTAATCACTCT+CGG | + | chr1.1:26355574-26355593 | MS.gene65471:CDS | 45.0% | |
| GGTAAGGGGAAAATGGAAGA+TGG | + | chr1.1:26354625-26354644 | MS.gene65471:CDS | 45.0% | |
| GTCCTTGGCGAATGTATATG+AGG | + | chr1.1:26353676-26353695 | MS.gene65471:CDS | 45.0% | |
| GTTCGAGAAAGAGGATGGTA+CGG | + | chr1.1:26353746-26353765 | MS.gene65471:CDS | 45.0% | |
| TAACCTGGTTCAAGTCTCCT+TGG | - | chr1.1:26353855-26353874 | None:intergenic | 45.0% | |
| TAAGAAGCTAGAGATAGGCG+AGG | + | chr1.1:26353509-26353528 | MS.gene65471:intron | 45.0% | |
| TATTTCAGAGGACCCAGTTG+AGG | - | chr1.1:26353259-26353278 | None:intergenic | 45.0% | |
| TCACCAAATGGATCCTCAAC+TGG | + | chr1.1:26353243-26353262 | MS.gene65471:CDS | 45.0% | |
| TTACCATCAATTTGGCGACC+TGG | + | chr1.1:26353363-26353382 | MS.gene65471:CDS | 45.0% | |
| TTACTGTTGATCGCCAAGGT+CGG | + | chr1.1:26355036-26355055 | MS.gene65471:intron | 45.0% | |
| TTGCCATGCATCTGTTGCAA+GGG | - | chr1.1:26355466-26355485 | None:intergenic | 45.0% | |
| TTTCCTCCATGAACTGGAAG+CGG | - | chr1.1:26353341-26353360 | None:intergenic | 45.0% | |
| TTTGCCATGCATCTGTTGCA+AGG | - | chr1.1:26355467-26355486 | None:intergenic | 45.0% | |
| ! | ATCATTGGCCATAATGGAGG+AGG | + | chr1.1:26354146-26354165 | MS.gene65471:CDS | 45.0% |
| ! | ATGGTTTTCCATCACATGGG+AGG | + | chr1.1:26355183-26355202 | MS.gene65471:intron | 45.0% |
| ! | GTTGATGGAACTAGAGGATG+GGG | + | chr1.1:26353876-26353895 | MS.gene65471:CDS | 45.0% |
| ! | TCATAGGGTGTCATATTGGC+AGG | + | chr1.1:26353622-26353641 | MS.gene65471:CDS | 45.0% |
| ! | TCATTTTCATGGCTCTTGGC+GGG | - | chr1.1:26354857-26354876 | None:intergenic | 45.0% |
| AAAGGAAAGTGGCGAGCTAC+CGG | + | chr1.1:26355155-26355174 | MS.gene65471:intron | 50.0% | |
| AAGTCACCAAGGATGCACCA+AGG | - | chr1.1:26355260-26355279 | None:intergenic | 50.0% | |
| ACAAGTGGACCCTGTACCAT+AGG | - | chr1.1:26354541-26354560 | None:intergenic | 50.0% | |
| ACTGCGGGAGGAATAATAGC+TGG | + | chr1.1:26354302-26354321 | MS.gene65471:CDS | 50.0% | |
| AGGGGACCCAAATGCTGAAT+GGG | + | chr1.1:26354384-26354403 | MS.gene65471:CDS | 50.0% | |
| ATCAATTTGGCGACCTGGTC+AGG | + | chr1.1:26353368-26353387 | MS.gene65471:CDS | 50.0% | |
| ATCCTCCTCCGCGCAAAATT+CGG | - | chr1.1:26354100-26354119 | None:intergenic | 50.0% | |
| GACCCAGTTGAGGATCCATT+TGG | - | chr1.1:26353249-26353268 | None:intergenic | 50.0% | |
| GATGGGTGAGACTTCAGTGT+GGG | + | chr1.1:26354469-26354488 | MS.gene65471:CDS | 50.0% | |
| GCCTATAAGGCCTATGGTAC+AGG | + | chr1.1:26354528-26354547 | MS.gene65471:intron | 50.0% | |
| GGGGTTACTATCACTCAAGC+TGG | + | chr1.1:26353390-26353409 | MS.gene65471:intron | 50.0% | |
| GTATGGGGGTCCCAAATACT+AGG | + | chr1.1:26354246-26354265 | MS.gene65471:CDS | 50.0% | |
| GTCCTTCACCTCCTCCATTA+TGG | - | chr1.1:26354157-26354176 | None:intergenic | 50.0% | |
| GTGAACAAGTGGCTTAGAGG+AGG | + | chr1.1:26353945-26353964 | MS.gene65471:CDS | 50.0% | |
| TATCCGCTTCCAGTTCATGG+AGG | + | chr1.1:26353335-26353354 | MS.gene65471:CDS | 50.0% | |
| TCAATTTGGCGACCTGGTCA+GGG | + | chr1.1:26353369-26353388 | MS.gene65471:CDS | 50.0% | |
| TCCATGAACTGGAAGCGGAT+AGG | - | chr1.1:26353336-26353355 | None:intergenic | 50.0% | |
| TCGTAATGCAGTGACCGATG+CGG | + | chr1.1:26355350-26355369 | MS.gene65471:intron | 50.0% | |
| TGAACCGTTGAAGCGAAGCA+TGG | + | chr1.1:26353722-26353741 | MS.gene65471:CDS | 50.0% | |
| TGAAGTTGAAGTCTGGGCTC+AGG | + | chr1.1:26353554-26353573 | MS.gene65471:CDS | 50.0% | |
| TGACCAGGTCGCCAAATTGA+TGG | - | chr1.1:26353369-26353388 | None:intergenic | 50.0% | |
| TTCAGGCGTGACAGTTACTG+CGG | + | chr1.1:26354286-26354305 | MS.gene65471:CDS | 50.0% | |
| ! | AATGATGGGGGTCGCAATGT+TGG | + | chr1.1:26353909-26353928 | MS.gene65471:CDS | 50.0% |
| ! | CAGCAGATCCAAGGCTTTGA+GGG | + | chr1.1:26354365-26354384 | MS.gene65471:CDS | 50.0% |
| ! | CATTTTCATGGCTCTTGGCG+GGG | - | chr1.1:26354856-26354875 | None:intergenic | 50.0% |
| ! | CCCTGTACCATAGGCCTTAT+AGG | - | chr1.1:26354532-26354551 | None:intergenic | 50.0% |
| ! | GTTTTCCATCACATGGGAGG+CGG | + | chr1.1:26355186-26355205 | MS.gene65471:intron | 50.0% |
| ! | TAGTGATCAGAGGAAGGTGC+TGG | - | chr1.1:26355522-26355541 | None:intergenic | 50.0% |
| ! | TCTCCTTGGGCAGAAAGCAT+CGG | - | chr1.1:26353841-26353860 | None:intergenic | 50.0% |
| ! | TGATGGGTGAGACTTCAGTG+TGG | + | chr1.1:26354468-26354487 | MS.gene65471:CDS | 50.0% |
| !! | AGCAGATCCAAGGCTTTGAG+GGG | + | chr1.1:26354366-26354385 | MS.gene65471:CDS | 50.0% |
| AATTTGGCGACCTGGTCAGG+GGG | + | chr1.1:26353371-26353390 | MS.gene65471:CDS | 55.0% | |
| ACACCGATGCTTTCTGCCCA+AGG | + | chr1.1:26353835-26353854 | MS.gene65471:CDS | 55.0% | |
| AGACTTCAGTGTGGGACGTG+TGG | + | chr1.1:26354477-26354496 | MS.gene65471:intron | 55.0% | |
| ATGGAGGAGGTGAAGGACAG+TGG | + | chr1.1:26354159-26354178 | MS.gene65471:CDS | 55.0% | |
| CAATTTGGCGACCTGGTCAG+GGG | + | chr1.1:26353370-26353389 | MS.gene65471:CDS | 55.0% | |
| CACACCAGCACCTTCATTCC+CGG | - | chr1.1:26354758-26354777 | None:intergenic | 55.0% | |
| CGTAATGCAGTGACCGATGC+GGG | + | chr1.1:26355351-26355370 | MS.gene65471:intron | 55.0% | |
| GAGGGGACCCAAATGCTGAA+TGG | + | chr1.1:26354383-26354402 | MS.gene65471:CDS | 55.0% | |
| GATAGGCGAGGCTATCTCTG+AGG | + | chr1.1:26353521-26353540 | MS.gene65471:CDS | 55.0% | |
| GCAGCAGATCCAAGGCTTTG+AGG | + | chr1.1:26354364-26354383 | MS.gene65471:CDS | 55.0% | |
| GCCTATCCGCTTCCAGTTCA+TGG | + | chr1.1:26353332-26353351 | MS.gene65471:CDS | 55.0% | |
| GCTTAGAGGAGGAAGAGTGG+CGG | + | chr1.1:26353956-26353975 | MS.gene65471:CDS | 55.0% | |
| GTGATAGTAACCCCCTGACC+AGG | - | chr1.1:26353384-26353403 | None:intergenic | 55.0% | |
| GTGCGGCTGACCTTACTGTT+TGG | + | chr1.1:26355703-26355722 | MS.gene65471:CDS | 55.0% | |
| GTGGCTTAGAGGAGGAAGAG+TGG | + | chr1.1:26353953-26353972 | MS.gene65471:CDS | 55.0% | |
| GTTGGAGGAGCAGCTGAACA+AGG | + | chr1.1:26354709-26354728 | MS.gene65471:CDS | 55.0% | |
| TACTTTGTGAACCGGGTCCG+AGG | + | chr1.1:26355553-26355572 | MS.gene65471:CDS | 55.0% | |
| TCACTCAAGCTGGCGAGAAC+CGG | + | chr1.1:26353400-26353419 | MS.gene65471:intron | 55.0% | |
| TCAGGCGTGACAGTTACTGC+GGG | + | chr1.1:26354287-26354306 | MS.gene65471:CDS | 55.0% | |
| TGCCCAAGGAGACTTGAACC+AGG | + | chr1.1:26353849-26353868 | MS.gene65471:CDS | 55.0% | |
| TGGAGGAGGTGAAGGACAGT+GGG | + | chr1.1:26354160-26354179 | MS.gene65471:CDS | 55.0% | |
| TTACGTTTCTGCCTCGGACC+CGG | - | chr1.1:26355567-26355586 | None:intergenic | 55.0% | |
| TTTGGGTCCCCTCAAAGCCT+TGG | - | chr1.1:26354376-26354395 | None:intergenic | 55.0% | |
| ! | CAGCGTGTCCGAATTTTGCG+CGG | + | chr1.1:26354089-26354108 | MS.gene65471:CDS | 55.0% |
| ! | GATACCGGGAATGAAGGTGC+TGG | + | chr1.1:26354751-26354770 | MS.gene65471:CDS | 55.0% |
| ! | GGCCATAATGGAGGAGGTGA+AGG | + | chr1.1:26354152-26354171 | MS.gene65471:CDS | 55.0% |
| ! | TGGCGAGCTACCGGTTACTA+TGG | + | chr1.1:26355164-26355183 | MS.gene65471:intron | 55.0% |
| !! | GGGAATGAAGGTGCTGGTGT+GGG | + | chr1.1:26354757-26354776 | MS.gene65471:intron | 55.0% |
| ATGGGAGGCGGAGAGATGCA+TGG | + | chr1.1:26355198-26355217 | MS.gene65471:intron | 60.0% | |
| CAAGACCACCACTCCGACCT+TGG | - | chr1.1:26355052-26355071 | None:intergenic | 60.0% | |
| GATGGGGGTCGCAATGTTGG+CGG | + | chr1.1:26353912-26353931 | MS.gene65471:CDS | 60.0% | |
| GCGCCCTTGCAACAGATGCA+TGG | + | chr1.1:26355460-26355479 | MS.gene65471:intron | 60.0% | |
| GTTGATCGCCAAGGTCGGAG+TGG | + | chr1.1:26355041-26355060 | MS.gene65471:intron | 60.0% | |
| TCTCTCCGCCTCCCATGTGA+TGG | - | chr1.1:26355194-26355213 | None:intergenic | 60.0% | |
| ! | AGGCGAGGCTATCTCTGAGG+TGG | + | chr1.1:26353524-26353543 | MS.gene65471:CDS | 60.0% |
| ! | CGTGTCCGAATTTTGCGCGG+AGG | + | chr1.1:26354092-26354111 | MS.gene65471:CDS | 60.0% |
| ! | GTCCGAATTTTGCGCGGAGG+AGG | + | chr1.1:26354095-26354114 | MS.gene65471:CDS | 60.0% |
| !! | CGGGAATGAAGGTGCTGGTG+TGG | + | chr1.1:26354756-26354775 | MS.gene65471:intron | 60.0% |
| GATCGCCAAGGTCGGAGTGG+TGG | + | chr1.1:26355044-26355063 | MS.gene65471:intron | 65.0% | |
| GGCGTGACAGTTACTGCGGG+AGG | + | chr1.1:26354290-26354309 | MS.gene65471:CDS | 65.0% | |
| TGGAGGTCGTACGGGCGGTA+GGG | + | chr1.1:26353983-26354002 | MS.gene65471:CDS | 65.0% | |
| ! | GGCGGTAGGGCAGGTTCTGA+TGG | + | chr1.1:26353996-26354015 | MS.gene65471:CDS | 65.0% |
| GTGGAGGTCGTACGGGCGGT+AGG | + | chr1.1:26353982-26354001 | MS.gene65471:CDS | 70.0% | |
| GCGCGTGGAGGTCGTACGGG+CGG | + | chr1.1:26353978-26353997 | MS.gene65471:CDS | 75.0% | |
| GCGGCGCGTGGAGGTCGTAC+GGG | + | chr1.1:26353975-26353994 | MS.gene65471:CDS | 75.0% | |
| GGAAGAGTGGCGGCGCGTGG+AGG | + | chr1.1:26353966-26353985 | MS.gene65471:CDS | 75.0% | |
| GGAGGAAGAGTGGCGGCGCG+TGG | + | chr1.1:26353963-26353982 | MS.gene65471:CDS | 75.0% | |
| GGCGGCGCGTGGAGGTCGTA+CGG | + | chr1.1:26353974-26353993 | MS.gene65471:CDS | 75.0% | |
| GGTCGTACGGGCGGTAGGGC+AGG | + | chr1.1:26353987-26354006 | MS.gene65471:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 26353213 | 26355779 | 26353213 | ID=MS.gene65471 |
| chr1.1 | mRNA | 26353213 | 26355779 | 26353213 | ID=MS.gene65471.t1;Parent=MS.gene65471 |
| chr1.1 | exon | 26353213 | 26353392 | 26353213 | ID=MS.gene65471.t1.exon1;Parent=MS.gene65471.t1 |
| chr1.1 | CDS | 26353213 | 26353392 | 26353213 | ID=cds.MS.gene65471.t1;Parent=MS.gene65471.t1 |
| chr1.1 | exon | 26353513 | 26354493 | 26353513 | ID=MS.gene65471.t1.exon2;Parent=MS.gene65471.t1 |
| chr1.1 | CDS | 26353513 | 26354493 | 26353513 | ID=cds.MS.gene65471.t1;Parent=MS.gene65471.t1 |
| chr1.1 | exon | 26354550 | 26354772 | 26354550 | ID=MS.gene65471.t1.exon3;Parent=MS.gene65471.t1 |
| chr1.1 | CDS | 26354550 | 26354772 | 26354550 | ID=cds.MS.gene65471.t1;Parent=MS.gene65471.t1 |
| chr1.1 | exon | 26355475 | 26355779 | 26355475 | ID=MS.gene65471.t1.exon4;Parent=MS.gene65471.t1 |
| chr1.1 | CDS | 26355475 | 26355779 | 26355475 | ID=cds.MS.gene65471.t1;Parent=MS.gene65471.t1 |
| Gene Sequence |
| Protein sequence |
