Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98756.t1 | RHN74097.1 | 43 | 481 | 252 | 9 | 252 | 720 | 259 | 729 | 2.60E-100 | 376.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98756.t1 | A0A396JG42 | 43.0 | 481 | 252 | 9 | 252 | 720 | 259 | 729 | 1.9e-100 | 376.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98756.t1 | MTR_6g033215 | 36.777 | 242 | 149 | 1 | 251 | 488 | 53 | 294 | 3.67e-50 | 178 |
MS.gene98756.t1 | MTR_0010s0370 | 34.911 | 169 | 110 | 0 | 299 | 467 | 10 | 178 | 7.34e-32 | 123 |
MS.gene98756.t1 | MTR_0010s0350 | 34.911 | 169 | 110 | 0 | 299 | 467 | 10 | 178 | 7.34e-32 | 123 |
MS.gene98756.t1 | MTR_6g053230 | 34.426 | 183 | 81 | 4 | 294 | 476 | 27 | 170 | 1.43e-26 | 114 |
MS.gene98756.t1 | MTR_3g024240 | 38.843 | 121 | 72 | 1 | 371 | 489 | 55 | 175 | 9.84e-22 | 94.0 |
MS.gene98756.t1 | MTR_8g468010 | 54.688 | 64 | 29 | 0 | 404 | 467 | 1 | 64 | 7.03e-20 | 87.0 |
MS.gene98756.t1 | MTR_3g053920 | 29.412 | 153 | 87 | 3 | 304 | 456 | 21 | 152 | 3.44e-19 | 89.0 |
MS.gene98756.t1 | MTR_1g032270 | 46.377 | 69 | 37 | 0 | 388 | 456 | 2 | 70 | 1.46e-16 | 77.8 |
MS.gene98756.t1 | MTR_2g061500 | 32.979 | 94 | 63 | 0 | 323 | 416 | 36 | 129 | 6.70e-16 | 75.5 |
MS.gene98756.t1 | MTR_4g020545 | 28.649 | 185 | 79 | 6 | 358 | 542 | 87 | 218 | 3.90e-15 | 77.4 |
MS.gene98756.t1 | MTR_4g103530 | 32.584 | 89 | 60 | 0 | 346 | 434 | 5 | 93 | 1.62e-13 | 70.5 |
MS.gene98756.t1 | MTR_6g053790 | 28.571 | 168 | 92 | 3 | 425 | 589 | 35 | 177 | 1.13e-12 | 70.5 |
MS.gene98756.t1 | MTR_1g036720 | 33.696 | 92 | 61 | 0 | 299 | 390 | 10 | 101 | 1.79e-12 | 65.1 |
MS.gene98756.t1 | MTR_7g011710 | 28.947 | 114 | 80 | 1 | 342 | 454 | 1 | 114 | 1.96e-12 | 66.2 |
MS.gene98756.t1 | MTR_7g089990 | 32.727 | 110 | 72 | 1 | 396 | 503 | 89 | 198 | 6.34e-12 | 66.2 |
MS.gene98756.t1 | MTR_4g075740 | 25.874 | 143 | 92 | 4 | 278 | 418 | 5 | 135 | 2.18e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98756.t1 | AT3G31430 | 24.725 | 182 | 133 | 1 | 323 | 504 | 134 | 311 | 5.34e-15 | 77.8 |
MS.gene98756.t1 | AT2G17920 | 22.162 | 185 | 142 | 1 | 323 | 507 | 39 | 221 | 1.21e-14 | 76.3 |
MS.gene98756.t1 | AT3G57587 | 24.359 | 156 | 111 | 3 | 352 | 507 | 73 | 221 | 2.17e-12 | 70.1 |
MS.gene98756.t1 | AT5G18636 | 20.635 | 189 | 148 | 1 | 319 | 507 | 35 | 221 | 3.29e-12 | 69.3 |
MS.gene98756.t1 | AT5G25200 | 20.635 | 189 | 148 | 1 | 319 | 507 | 35 | 221 | 3.67e-12 | 69.3 |
MS.gene98756.t1 | AT2G02103 | 20.635 | 189 | 148 | 1 | 319 | 507 | 35 | 221 | 4.48e-12 | 69.3 |
MS.gene98756.t1 | AT2G41590 | 24.359 | 156 | 111 | 3 | 352 | 507 | 73 | 221 | 5.54e-12 | 68.6 |
MS.gene98756.t1 | AT2G01050 | 23.243 | 185 | 136 | 2 | 322 | 506 | 80 | 258 | 1.17e-11 | 68.6 |
MS.gene98756.t1 | AT5G36228 | 20.765 | 183 | 143 | 1 | 323 | 505 | 39 | 219 | 2.44e-11 | 66.6 |
Find 185 sgRNAs with CRISPR-Local
Find 478 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAACCTGCCCTTTGGATTTA+TGG | 0.092150 | 6.2:+22790780 | MS.gene98756:CDS |
TCATTCCACTCCTTTGTATT+TGG | 0.157158 | 6.2:-22794737 | None:intergenic |
AGTGAGTATTGGATTCATTT+TGG | 0.158633 | 6.2:-22790435 | None:intergenic |
GTAATAATAGATTGCTTTCC+AGG | 0.225589 | 6.2:-22789464 | None:intergenic |
AAATCCTGCTTCAAACCTTT+TGG | 0.227187 | 6.2:-22791052 | None:intergenic |
AAACTTGGTCCCCACTTCTT+TGG | 0.234774 | 6.2:-22791084 | None:intergenic |
TGAATCAATGGGCCATCTTT+TGG | 0.241007 | 6.2:+22790804 | MS.gene98756:CDS |
ATGCACCAACCTTGCAATTC+TGG | 0.253069 | 6.2:-22791466 | None:intergenic |
TACTTTCACAAAGGCATTAA+AGG | 0.255006 | 6.2:+22789706 | MS.gene98756:CDS |
CCTGATCGAAGAACTGAAAA+AGG | 0.286955 | 6.2:-22790624 | None:intergenic |
CCTGCTAGTTGGAGTATGTT+TGG | 0.295807 | 6.2:-22791396 | None:intergenic |
CTTGTTCTTCCTTACATATA+TGG | 0.299352 | 6.2:-22789528 | None:intergenic |
CTGCTAGTTGGAGTATGTTT+GGG | 0.299435 | 6.2:-22791395 | None:intergenic |
GGCAATTTCTGCTATATTTG+TGG | 0.316929 | 6.2:+22791000 | MS.gene98756:CDS |
TTCTGAAGTGCGTGCTGAAC+AGG | 0.318069 | 6.2:+22791431 | MS.gene98756:CDS |
AGAAATTCATTGAAATACTT+TGG | 0.321627 | 6.2:+22789488 | MS.gene98756:CDS |
AGTCCTTCACATACCAGATT+TGG | 0.328104 | 6.2:+22789746 | MS.gene98756:CDS |
CAGCGGTTCATTAACGTTCA+TGG | 0.330339 | 6.2:-22790908 | None:intergenic |
GAATCTCCATAGTTTGTATT+GGG | 0.345222 | 6.2:-22791506 | None:intergenic |
CGAAGCCGGGTTGATGATTC+AGG | 0.346012 | 6.2:+22791663 | MS.gene98756:CDS |
AAGTATGGAGGTTGGGTTGT+AGG | 0.346823 | 6.2:+22789548 | MS.gene98756:CDS |
GAAATTCATTGAAATACTTT+GGG | 0.352952 | 6.2:+22789489 | MS.gene98756:CDS |
GAAGAACCCAATACAAACTA+TGG | 0.355495 | 6.2:+22791500 | MS.gene98756:CDS |
GGCAATTTAATGCTGTCTAA+TGG | 0.361003 | 6.2:+22789848 | MS.gene98756:CDS |
GGAATCTCCATAGTTTGTAT+TGG | 0.361049 | 6.2:-22791507 | None:intergenic |
TGGATTTATGGCTGAATCAA+TGG | 0.361540 | 6.2:+22790792 | MS.gene98756:CDS |
TAACGTTCATGGTGACTCTA+AGG | 0.362744 | 6.2:-22790897 | None:intergenic |
CTCAACCTATGGGGCAGATT+AGG | 0.363652 | 6.2:+22791580 | MS.gene98756:CDS |
GGCATATGTGTATTATGTTA+AGG | 0.366242 | 6.2:+22789912 | MS.gene98756:CDS |
TGCACTTGTTGCTTAAAATC+AGG | 0.369103 | 6.2:-22792595 | None:intergenic |
GTTGCATCCATTTGTTTGTC+AGG | 0.369149 | 6.2:-22790580 | None:intergenic |
CATGTAAATCAGTGTTGGTT+TGG | 0.372420 | 6.2:-22790474 | None:intergenic |
ATGATGAGTACAAGTCAATA+TGG | 0.375547 | 6.2:+22789651 | MS.gene98756:CDS |
CTTAATTAACTCTCAACCTA+TGG | 0.384357 | 6.2:+22791569 | MS.gene98756:CDS |
TGAAATTCAGCTTTCAAACT+TGG | 0.387896 | 6.2:-22791099 | None:intergenic |
TGATATTTGCAAAATACATT+GGG | 0.388096 | 6.2:+22791277 | MS.gene98756:CDS |
TGAACCGCTGAAGCAGTGTT+TGG | 0.391576 | 6.2:+22790921 | MS.gene98756:CDS |
CAAGCTCATAACCTGCCCTT+TGG | 0.392081 | 6.2:+22790772 | MS.gene98756:CDS |
TTTAGTTGTGAATCATGTAT+AGG | 0.401995 | 6.2:-22789986 | None:intergenic |
GGATTTATGGCTGAATCAAT+GGG | 0.406115 | 6.2:+22790793 | MS.gene98756:CDS |
GTTCTTCGATCAGGGAGAAA+TGG | 0.407110 | 6.2:+22790633 | MS.gene98756:CDS |
CAACATGGTTTCCCAAAAGA+TGG | 0.407361 | 6.2:-22790816 | None:intergenic |
GAATCTGTTATTCTCAGTTA+AGG | 0.416068 | 6.2:-22790602 | None:intergenic |
ATGCAGAATTGCTCCAAATC+TGG | 0.421305 | 6.2:-22789759 | None:intergenic |
GTTCTCCCGTTCCTGCTAGT+TGG | 0.422520 | 6.2:-22791407 | None:intergenic |
AGAGATGTGCAAGTCTGTTT+CGG | 0.422802 | 6.2:-22790552 | None:intergenic |
TGCTATATTTGTGGATTGCT+AGG | 0.423399 | 6.2:+22791009 | MS.gene98756:CDS |
TGTAAAATCAGCATGGAGAT+TGG | 0.429828 | 6.2:+22789377 | None:intergenic |
TACATGACTGCTGTCTGGTT+GGG | 0.430946 | 6.2:+22790491 | MS.gene98756:CDS |
GCTGGTATTGAAAATACATA+TGG | 0.432721 | 6.2:-22789627 | None:intergenic |
CATGCAATCAAAGGCGCAAA+AGG | 0.433576 | 6.2:+22789791 | MS.gene98756:CDS |
CTGCTACGCAAGCTTCAGTT+TGG | 0.436016 | 6.2:+22790703 | MS.gene98756:CDS |
GTGTTGGTTTGGCTTTGATC+AGG | 0.443849 | 6.2:-22790463 | None:intergenic |
GAAACAGACTTGCACATCTC+TGG | 0.450798 | 6.2:+22790554 | MS.gene98756:CDS |
TAAAGCAGCTAAAGCGAAGC+CGG | 0.451358 | 6.2:+22791649 | MS.gene98756:CDS |
TTTGAAGCAGGATTTATTGA+AGG | 0.454754 | 6.2:+22791060 | MS.gene98756:CDS |
TATGTAAGGAAGAACAAGTA+TGG | 0.458517 | 6.2:+22789533 | MS.gene98756:CDS |
GAAGAACAAGTATGGAGGTT+GGG | 0.459072 | 6.2:+22789541 | MS.gene98756:CDS |
TGAAGCTTGCGTAGCAGCAT+AGG | 0.460732 | 6.2:-22790697 | None:intergenic |
GAATATAGAGCAAGGGAGGA+GGG | 0.462737 | 6.2:+22789934 | MS.gene98756:CDS |
CTGATATTTGCAAAATACAT+TGG | 0.466883 | 6.2:+22791276 | MS.gene98756:CDS |
GGAATATAGAGCAAGGGAGG+AGG | 0.467200 | 6.2:+22789933 | MS.gene98756:CDS |
CTGGCAGCCTGACAAACAAA+TGG | 0.469258 | 6.2:+22790573 | MS.gene98756:CDS |
GAAGTCGCTGCTGCTGCACC+AGG | 0.471264 | 6.2:+22791372 | MS.gene98756:CDS |
AGTTGGAGTATGTTTGGGCC+TGG | 0.472490 | 6.2:-22791390 | None:intergenic |
TGATTTACATGACTGCTGTC+TGG | 0.475301 | 6.2:+22790486 | MS.gene98756:CDS |
GCAGCTTTCATGACAAGTAA+AGG | 0.477793 | 6.2:+22789827 | MS.gene98756:CDS |
GTGAACACTCCTCCTTCTTG+AGG | 0.480167 | 6.2:-22791126 | None:intergenic |
CTCTGGATGGCAGACTGAAA+AGG | 0.480488 | 6.2:+22790048 | MS.gene98756:CDS |
TTTCTTGTCTTCGCAGCCAA+GGG | 0.483429 | 6.2:-22791152 | None:intergenic |
AGGGTAACTGTCAAAATGCC+AGG | 0.484585 | 6.2:-22790677 | None:intergenic |
ACAGGTGCACAAAGGCAGAT+AGG | 0.485404 | 6.2:+22791174 | MS.gene98756:CDS |
CTATCGACACGATGGACATA+TGG | 0.486609 | 6.2:+22790746 | MS.gene98756:CDS |
TTAATTAACTCTCAACCTAT+GGG | 0.486934 | 6.2:+22791570 | MS.gene98756:CDS |
GTTTCTTGTCTTCGCAGCCA+AGG | 0.490103 | 6.2:-22791153 | None:intergenic |
GGGATTTGTTGACATGGTTG+CGG | 0.492073 | 6.2:-22790410 | None:intergenic |
AGCAGTGTTTGGAATTTGAA+AGG | 0.492894 | 6.2:+22790932 | MS.gene98756:CDS |
GGAAGAACAAGTATGGAGGT+TGG | 0.494054 | 6.2:+22789540 | MS.gene98756:CDS |
ATTGTGGCTCACTTGCAAAT+CGG | 0.495119 | 6.2:+22792513 | MS.gene98756:CDS |
AAGGTAAAGAGGATAATTAA+AGG | 0.496000 | 6.2:-22790370 | None:intergenic |
AGCAACAAGTGCAGCAACGC+TGG | 0.496058 | 6.2:+22792605 | MS.gene98756:CDS |
ATACTCCAACTAGCAGGAAC+GGG | 0.496717 | 6.2:+22791402 | MS.gene98756:CDS |
TTACATGACTGCTGTCTGGT+TGG | 0.498674 | 6.2:+22790490 | MS.gene98756:CDS |
TTTGTGAAAGTACAACTGAT+AGG | 0.499097 | 6.2:-22789695 | None:intergenic |
TGGCTGCGAAGACAAGAAAC+AGG | 0.499911 | 6.2:+22791156 | MS.gene98756:CDS |
ATCAGGCTGAGAGTGAGTAT+TGG | 0.500639 | 6.2:-22790446 | None:intergenic |
ACTGCTGTCTGGTTGGGAGA+TGG | 0.501631 | 6.2:+22790497 | MS.gene98756:CDS |
TGCCCCAAAAGGTTTGAAGC+AGG | 0.503127 | 6.2:+22791048 | MS.gene98756:CDS |
CACAAAACAGTAGCAATGAA+TGG | 0.505301 | 6.2:+22791301 | MS.gene98756:CDS |
AGTTTGAAAGCTGAATTTCA+AGG | 0.505996 | 6.2:+22791102 | MS.gene98756:CDS |
GATGCTGTTCAGACAAACAT+AGG | 0.507036 | 6.2:+22791711 | MS.gene98756:CDS |
TTAACAACAATTATGGTACA+TGG | 0.508600 | 6.2:+22790860 | MS.gene98756:CDS |
TCAGTGCAGATTTCAATGCT+TGG | 0.509237 | 6.2:+22791340 | MS.gene98756:CDS |
AGCAAGGGAGGAGGGAGAGA+AGG | 0.511896 | 6.2:+22789942 | MS.gene98756:CDS |
GTTGGGTTGTAGGAGGCGTA+TGG | 0.518171 | 6.2:+22789558 | MS.gene98756:CDS |
AGTCTTGTGCCATATATGTA+AGG | 0.519731 | 6.2:+22789519 | MS.gene98756:CDS |
GTCTGAACAGCATCAACATC+AGG | 0.520326 | 6.2:-22791702 | None:intergenic |
CAATCAAAGGCGCAAAAGGA+GGG | 0.520647 | 6.2:+22789795 | MS.gene98756:CDS |
GAGATTGGAAGAAGGAGTGC+AGG | 0.522017 | 6.2:+22789392 | MS.gene98756:CDS |
AGGTTGAGAGTTAATTAAGC+TGG | 0.522696 | 6.2:-22791565 | None:intergenic |
CGGATAGCATGAAAGCGGAT+AGG | 0.526936 | 6.2:-22790532 | None:intergenic |
TAAGGAATATAGAGCAAGGG+AGG | 0.527019 | 6.2:+22789930 | MS.gene98756:CDS |
CATTGAAATCTGCACTGAAA+GGG | 0.528617 | 6.2:-22791335 | None:intergenic |
CGAGTCGGGAAAGTTAAGAT+TGG | 0.535390 | 6.2:+22791231 | MS.gene98756:CDS |
TGCTGAACAGGAAGAGGATG+AGG | 0.535578 | 6.2:+22791443 | MS.gene98756:CDS |
TATCAACCTCATTCTTTGCA+AGG | 0.535866 | 6.2:+22790091 | MS.gene98756:CDS |
AAAATAAGCACAAAAGATGA+TGG | 0.536135 | 6.2:+22791624 | MS.gene98756:CDS |
TGAGGCCAGAATTGCAAGGT+TGG | 0.537810 | 6.2:+22791461 | MS.gene98756:CDS |
GCATTGAAATCTGCACTGAA+AGG | 0.538168 | 6.2:-22791336 | None:intergenic |
ATGTTAAGGAATATAGAGCA+AGG | 0.538367 | 6.2:+22789926 | MS.gene98756:CDS |
GTAAGATTCATAGTCGAGTC+GGG | 0.538534 | 6.2:+22791217 | MS.gene98756:CDS |
GTTGTGAATCATGTATAGGA+AGG | 0.539048 | 6.2:-22789982 | None:intergenic |
GTGCACAAAGGCAGATAGGT+GGG | 0.540688 | 6.2:+22791178 | MS.gene98756:CDS |
GCAGTGTTTGGAATTTGAAA+GGG | 0.541766 | 6.2:+22790933 | MS.gene98756:CDS |
ATTTGCAAGTGAGCCACAAT+GGG | 0.543382 | 6.2:-22792510 | None:intergenic |
CTGTACTACCATGCAATCAA+AGG | 0.545673 | 6.2:+22789782 | MS.gene98756:CDS |
GCAGCAGCGACTTCCACGAC+TGG | 0.547541 | 6.2:-22791363 | None:intergenic |
TTTCAATGCTTGGCCAGTCG+TGG | 0.548634 | 6.2:+22791350 | MS.gene98756:CDS |
TGACTTGTACTCATCATAGC+TGG | 0.549160 | 6.2:-22789645 | None:intergenic |
AATTCCAAACACTGCTTCAG+CGG | 0.549989 | 6.2:-22790925 | None:intergenic |
TGTTCAGCACGCACTTCAGA+AGG | 0.551176 | 6.2:-22791429 | None:intergenic |
AAAGCAGCTAAAGCGAAGCC+GGG | 0.553015 | 6.2:+22791650 | MS.gene98756:CDS |
GCAATCAAAGGCGCAAAAGG+AGG | 0.556743 | 6.2:+22789794 | MS.gene98756:CDS |
CTATGAATCTTACTGCAAGC+TGG | 0.562630 | 6.2:-22791207 | None:intergenic |
GTGTCGCTATTTAAACAAGT+AGG | 0.563703 | 6.2:-22790304 | None:intergenic |
TGATGATTCAGGTGCTGAAG+TGG | 0.564104 | 6.2:+22791674 | MS.gene98756:CDS |
GCAGTCATGTAAATCAGTGT+TGG | 0.565148 | 6.2:-22790479 | None:intergenic |
CAGCCATAAATCCAAAGGGC+AGG | 0.565418 | 6.2:-22790783 | None:intergenic |
GGTGACAGAACTTGTGATCA+AGG | 0.565458 | 6.2:-22790389 | None:intergenic |
AGTATATGTTTCATGCATGA+AGG | 0.567428 | 6.2:-22789594 | None:intergenic |
AACTTGTGATCAAGGTAAAG+AGG | 0.567499 | 6.2:-22790381 | None:intergenic |
CAAATACCTTGCAAAGAATG+AGG | 0.567755 | 6.2:-22790097 | None:intergenic |
TGGAAGCTCTATCCTGAAGA+AGG | 0.567863 | 6.2:+22792625 | MS.gene98756:CDS |
TGTCGCTATTTAAACAAGTA+GGG | 0.568062 | 6.2:-22790303 | None:intergenic |
GAGGAGTGTTCACAAACCCT+TGG | 0.569233 | 6.2:+22791136 | MS.gene98756:CDS |
CCAAACATACTCCAACTAGC+AGG | 0.572980 | 6.2:+22791396 | MS.gene98756:CDS |
GGGAGAGAAGGCGTTACAGA+AGG | 0.573171 | 6.2:+22789954 | MS.gene98756:CDS |
GAAGCTTGCGTAGCAGCATA+GGG | 0.575697 | 6.2:-22790696 | None:intergenic |
TATTGAAGGACCAAAGAAGT+GGG | 0.576064 | 6.2:+22791074 | MS.gene98756:CDS |
GAATTTCAAGGTCCTCAAGA+AGG | 0.576802 | 6.2:+22791114 | MS.gene98756:CDS |
CATACTCCAACTAGCAGGAA+CGG | 0.578568 | 6.2:+22791401 | MS.gene98756:CDS |
TGGAACAGAAATGTTGCTGC+TGG | 0.579678 | 6.2:+22789868 | MS.gene98756:CDS |
AGTAAGATTCATAGTCGAGT+CGG | 0.579741 | 6.2:+22791216 | MS.gene98756:CDS |
GTCATCCTAATCTGCCCCAT+AGG | 0.583256 | 6.2:-22791585 | None:intergenic |
TCAGCATGGAGATTGGAAGA+AGG | 0.583847 | 6.2:+22789384 | None:intergenic |
CATATGTCCATCGTGTCGAT+AGG | 0.586167 | 6.2:-22790745 | None:intergenic |
GGGTTGTAGGAGGCGTATGG+TGG | 0.588350 | 6.2:+22789561 | MS.gene98756:CDS |
TGATTCAGCCATAAATCCAA+AGG | 0.588493 | 6.2:-22790788 | None:intergenic |
CTTCTGATCATTACCCATTG+TGG | 0.595526 | 6.2:+22792497 | MS.gene98756:CDS |
TTGGGAGGGATTTGTTGACA+TGG | 0.597510 | 6.2:-22790416 | None:intergenic |
GCTCCAAATCTGGTATGTGA+AGG | 0.599513 | 6.2:-22789749 | None:intergenic |
GATTTGCAAGTGAGCCACAA+TGG | 0.600467 | 6.2:-22792511 | None:intergenic |
TATGGAGGTTGGGTTGTAGG+AGG | 0.600672 | 6.2:+22789551 | MS.gene98756:CDS |
TGTTAAGGAATATAGAGCAA+GGG | 0.602840 | 6.2:+22789927 | MS.gene98756:CDS |
TCAAGCCAAATACAAAGGAG+TGG | 0.604772 | 6.2:+22794732 | MS.gene98756:intron |
GATTCAGCCATAAATCCAAA+GGG | 0.605278 | 6.2:-22790787 | None:intergenic |
GCTTTAAGTTTGAAAATGCG+TGG | 0.609787 | 6.2:+22792563 | MS.gene98756:CDS |
AATCAAAGGCGCAAAAGGAG+GGG | 0.609854 | 6.2:+22789796 | MS.gene98756:CDS |
TTATTGAAGGACCAAAGAAG+TGG | 0.610496 | 6.2:+22791073 | MS.gene98756:CDS |
GATCAGAAGATGTCGTCGAA+AGG | 0.615542 | 6.2:-22792483 | None:intergenic |
TGTGAAGGACTCATACAGCA+TGG | 0.616485 | 6.2:-22789734 | None:intergenic |
CACTATGCCTATCGACACGA+TGG | 0.617217 | 6.2:+22790738 | MS.gene98756:CDS |
GTGAAGGACTCATACAGCAT+GGG | 0.618290 | 6.2:-22789733 | None:intergenic |
AGTGCGTGCTGAACAGGAAG+AGG | 0.618430 | 6.2:+22791437 | MS.gene98756:CDS |
TAAATAGCGACACTCAGAAG+AGG | 0.619913 | 6.2:+22790314 | MS.gene98756:CDS |
AAGTTAATGCAATCTCTGGA+TGG | 0.619975 | 6.2:+22790035 | MS.gene98756:CDS |
TGTTTGGAATTTGAAAGGGA+AGG | 0.622070 | 6.2:+22790937 | MS.gene98756:CDS |
ATACATAAGATGTTTCATCC+TGG | 0.622969 | 6.2:+22789446 | MS.gene98756:CDS |
AAATATAGCAGAAATTGCCA+AGG | 0.630713 | 6.2:-22790996 | None:intergenic |
GGTGCACAAAGGCAGATAGG+TGG | 0.633055 | 6.2:+22791177 | MS.gene98756:CDS |
GACAAGAAACAGGTGCACAA+AGG | 0.635000 | 6.2:+22791166 | MS.gene98756:CDS |
TATCAGTTGTACTTTCACAA+AGG | 0.644074 | 6.2:+22789697 | MS.gene98756:CDS |
GTAAGGAAGAACAAGTATGG+AGG | 0.645207 | 6.2:+22789536 | MS.gene98756:CDS |
TGCACAAAGGCAGATAGGTG+GGG | 0.647001 | 6.2:+22791179 | MS.gene98756:CDS |
GGGTAACTGTCAAAATGCCA+GGG | 0.653148 | 6.2:-22790676 | None:intergenic |
CAGCACCTGAATCATCAACC+CGG | 0.661564 | 6.2:-22791668 | None:intergenic |
TTTCAAGGTCCTCAAGAAGG+AGG | 0.662814 | 6.2:+22791117 | MS.gene98756:CDS |
TGGTAGAAACTCTGTCACAA+AGG | 0.663898 | 6.2:+22791251 | MS.gene98756:CDS |
GATATTTGCAAAATACATTG+GGG | 0.667589 | 6.2:+22791278 | MS.gene98756:CDS |
GTGTCGATAGGCATAGTGAG+TGG | 0.678942 | 6.2:-22790733 | None:intergenic |
ATTGAAGGACCAAAGAAGTG+GGG | 0.689530 | 6.2:+22791075 | MS.gene98756:CDS |
AGGATGAGGCCAGAATTGCA+AGG | 0.696977 | 6.2:+22791457 | MS.gene98756:CDS |
AGGTGCTGATCCAGTAACCG+TGG | 0.698899 | 6.2:+22790957 | MS.gene98756:CDS |
TAATTAACTCTCAACCTATG+GGG | 0.700317 | 6.2:+22791571 | MS.gene98756:CDS |
TGTTTCGGATAGCATGAAAG+CGG | 0.702105 | 6.2:-22790537 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GTAAATTAAAAATAATAACT+GGG | - | chr6.2:22790215-22790234 | None:intergenic | 10.0% |
!! | TAGAAATTAAAAATAAAAAC+GGG | + | chr6.2:22790167-22790186 | MS.gene98756:intron | 10.0% |
!! | TGTAAATTAAAAATAATAAC+TGG | - | chr6.2:22790216-22790235 | None:intergenic | 10.0% |
!!! | TTTTAATTTACATTAAATCA+TGG | + | chr6.2:22790224-22790243 | MS.gene98756:intron | 10.0% |
!! | AGAAATTAAAAATAAAAACG+GGG | + | chr6.2:22790168-22790187 | MS.gene98756:intron | 15.0% |
!!! | ATTTTAATTCTCTCAAAAAT+AGG | + | chr6.2:22792788-22792807 | MS.gene98756:intron | 15.0% |
!!! | TATGATTTTAACAACAATTA+TGG | + | chr6.2:22790853-22790872 | MS.gene98756:CDS | 15.0% |
!! | AGAAATTCATTGAAATACTT+TGG | + | chr6.2:22789488-22789507 | MS.gene98756:CDS | 20.0% |
!! | GAAATTCATTGAAATACTTT+GGG | + | chr6.2:22789489-22789508 | MS.gene98756:CDS | 20.0% |
!! | TGAACTAATTCATTATATGA+AGG | + | chr6.2:22793497-22793516 | MS.gene98756:intron | 20.0% |
!! | TGATATTTGCAAAATACATT+GGG | + | chr6.2:22791277-22791296 | MS.gene98756:CDS | 20.0% |
!!! | CTTTCAAATTTGTTAAAGAT+CGG | + | chr6.2:22794126-22794145 | MS.gene98756:intron | 20.0% |
!!! | GGAATTTCAAGTATATTTTA+TGG | + | chr6.2:22789413-22789432 | MS.gene98756:CDS | 20.0% |
!!! | TTCAAGTATATTTTATGGAA+AGG | + | chr6.2:22789418-22789437 | MS.gene98756:CDS | 20.0% |
! | AAAATAAGCACAAAAGATGA+TGG | + | chr6.2:22791624-22791643 | MS.gene98756:CDS | 25.0% |
! | AAGGTAAAGAGGATAATTAA+AGG | - | chr6.2:22790373-22790392 | None:intergenic | 25.0% |
! | ACTACATTACATAAAGCAAT+GGG | - | chr6.2:22793354-22793373 | None:intergenic | 25.0% |
! | ATATGAAGGCAAAAACAAAA+GGG | + | chr6.2:22793511-22793530 | MS.gene98756:intron | 25.0% |
! | CATTAAATCATGGATGAATA+TGG | + | chr6.2:22790234-22790253 | MS.gene98756:intron | 25.0% |
! | CTGATATTTGCAAAATACAT+TGG | + | chr6.2:22791276-22791295 | MS.gene98756:CDS | 25.0% |
! | GATATTTGCAAAATACATTG+GGG | + | chr6.2:22791278-22791297 | MS.gene98756:CDS | 25.0% |
! | TAATTCTCTCAAAAATAGGT+TGG | + | chr6.2:22792792-22792811 | MS.gene98756:intron | 25.0% |
! | TATATGAAGGCAAAAACAAA+AGG | + | chr6.2:22793510-22793529 | MS.gene98756:intron | 25.0% |
! | TTAACAACAATTATGGTACA+TGG | + | chr6.2:22790860-22790879 | MS.gene98756:CDS | 25.0% |
! | TTAATTAACTCTCAACCTAT+GGG | + | chr6.2:22791570-22791589 | MS.gene98756:CDS | 25.0% |
! | TTTAGTTGTGAATCATGTAT+AGG | - | chr6.2:22789989-22790008 | None:intergenic | 25.0% |
!! | AATATTTCTGTCTGAAACAA+TGG | + | chr6.2:22791928-22791947 | MS.gene98756:intron | 25.0% |
!! | ACAATAAAACTCATTTTCCT+TGG | - | chr6.2:22791830-22791849 | None:intergenic | 25.0% |
!!! | AATTTTCAAGGTGTTCAATT+CGG | - | chr6.2:22792939-22792958 | None:intergenic | 25.0% |
!!! | ATGATTTGTTGATTGGAAAA+TGG | + | chr6.2:22792113-22792132 | MS.gene98756:intron | 25.0% |
!!! | GATTATTTTAGTGCTTCTAT+AGG | + | chr6.2:22794518-22794537 | MS.gene98756:intron | 25.0% |
!!! | GGAAAATGAGTTTTATTGTA+TGG | + | chr6.2:22791831-22791850 | MS.gene98756:intron | 25.0% |
!!! | TTTTCAAACTTAAAGCGTTT+TGG | - | chr6.2:22792559-22792578 | None:intergenic | 25.0% |
AAAATGCTCATGACATATGA+GGG | - | chr6.2:22794239-22794258 | None:intergenic | 30.0% | |
AAATATAGCAGAAATTGCCA+AGG | - | chr6.2:22790999-22791018 | None:intergenic | 30.0% | |
AAATCACATTGATGTTGAAG+TGG | + | chr6.2:22792090-22792109 | MS.gene98756:intron | 30.0% | |
AACATTGCTTTAATCCCAAA+GGG | + | chr6.2:22793297-22793316 | MS.gene98756:intron | 30.0% | |
AAGCTTATGACAGATTAGAT+TGG | + | chr6.2:22793571-22793590 | MS.gene98756:intron | 30.0% | |
ACAATTATCATCATCAGAGA+TGG | - | chr6.2:22793082-22793101 | None:intergenic | 30.0% | |
AGCTTATGACAGATTAGATT+GGG | + | chr6.2:22793572-22793591 | MS.gene98756:intron | 30.0% | |
AGTATATGTTTCATGCATGA+AGG | - | chr6.2:22789597-22789616 | None:intergenic | 30.0% | |
AGTTTGAAAGCTGAATTTCA+AGG | + | chr6.2:22791102-22791121 | MS.gene98756:CDS | 30.0% | |
ATACATAAGATGTTTCATCC+TGG | + | chr6.2:22789446-22789465 | MS.gene98756:CDS | 30.0% | |
ATGATGAGTACAAGTCAATA+TGG | + | chr6.2:22789651-22789670 | MS.gene98756:CDS | 30.0% | |
ATGTAATGTAGTCTACAAGA+TGG | + | chr6.2:22793362-22793381 | MS.gene98756:intron | 30.0% | |
ATGTTAAGGAATATAGAGCA+AGG | + | chr6.2:22789926-22789945 | MS.gene98756:CDS | 30.0% | |
ATGTTAGTAGAGTTCAAATG+TGG | - | chr6.2:22793282-22793301 | None:intergenic | 30.0% | |
ATTGGAAGAATTCAAAACTG+CGG | + | chr6.2:22793122-22793141 | MS.gene98756:intron | 30.0% | |
CAAAAAGTTAATGCAATCTC+TGG | + | chr6.2:22790031-22790050 | MS.gene98756:CDS | 30.0% | |
CTTAATTAACTCTCAACCTA+TGG | + | chr6.2:22791569-22791588 | MS.gene98756:CDS | 30.0% | |
CTTGTTCTTCCTTACATATA+TGG | - | chr6.2:22789531-22789550 | None:intergenic | 30.0% | |
GAACACCTTGAAAATTCAAA+TGG | + | chr6.2:22792943-22792962 | MS.gene98756:intron | 30.0% | |
GAATCTGTTATTCTCAGTTA+AGG | - | chr6.2:22790605-22790624 | None:intergenic | 30.0% | |
GACTACATTACATAAAGCAA+TGG | - | chr6.2:22793355-22793374 | None:intergenic | 30.0% | |
GCACTAAAATAATCACTATG+CGG | - | chr6.2:22794512-22794531 | None:intergenic | 30.0% | |
GGCATATGTGTATTATGTTA+AGG | + | chr6.2:22789912-22789931 | MS.gene98756:CDS | 30.0% | |
GTAATAATAGATTGCTTTCC+AGG | - | chr6.2:22789467-22789486 | None:intergenic | 30.0% | |
GTTTGAAAGCGATAATGTAA+TGG | + | chr6.2:22791782-22791801 | MS.gene98756:intron | 30.0% | |
TAACATTGCTTTAATCCCAA+AGG | + | chr6.2:22793296-22793315 | MS.gene98756:intron | 30.0% | |
TAATTAACTCTCAACCTATG+GGG | + | chr6.2:22791571-22791590 | MS.gene98756:CDS | 30.0% | |
TATCAGTTGTACTTTCACAA+AGG | + | chr6.2:22789697-22789716 | MS.gene98756:CDS | 30.0% | |
TATGTAAGGAAGAACAAGTA+TGG | + | chr6.2:22789533-22789552 | MS.gene98756:CDS | 30.0% | |
TGAAATTCAGCTTTCAAACT+TGG | - | chr6.2:22791102-22791121 | None:intergenic | 30.0% | |
TGATAATTGTTCCTTAACTG+CGG | + | chr6.2:22793092-22793111 | MS.gene98756:intron | 30.0% | |
TGTCGCTATTTAAACAAGTA+GGG | - | chr6.2:22790306-22790325 | None:intergenic | 30.0% | |
TGTTAAGGAATATAGAGCAA+GGG | + | chr6.2:22789927-22789946 | MS.gene98756:CDS | 30.0% | |
TTTGAACTTTACTGATGTCA+CGG | - | chr6.2:22792720-22792739 | None:intergenic | 30.0% | |
! | AATGGAAAGAGTTTTACACA+CGG | + | chr6.2:22790651-22790670 | MS.gene98756:CDS | 30.0% |
! | AGTATATTTTATGGAAAGGC+AGG | + | chr6.2:22789422-22789441 | MS.gene98756:CDS | 30.0% |
! | ATAAAACTCATTTTCCTTGG+CGG | - | chr6.2:22791827-22791846 | None:intergenic | 30.0% |
! | GAATCTCCATAGTTTGTATT+GGG | - | chr6.2:22791509-22791528 | None:intergenic | 30.0% |
! | GCTGGTATTGAAAATACATA+TGG | - | chr6.2:22789630-22789649 | None:intergenic | 30.0% |
! | GTTTTCGTACTTAAAAACCA+CGG | - | chr6.2:22790977-22790996 | None:intergenic | 30.0% |
! | TCTTTTCTTCTTCCATTTTC+CGG | - | chr6.2:22792163-22792182 | None:intergenic | 30.0% |
! | TGAGTCAACTTTCAGTTTTA+TGG | + | chr6.2:22789891-22789910 | MS.gene98756:CDS | 30.0% |
! | TTTGAAGCAGGATTTATTGA+AGG | + | chr6.2:22791060-22791079 | MS.gene98756:CDS | 30.0% |
! | TTTGTGAAAGTACAACTGAT+AGG | - | chr6.2:22789698-22789717 | None:intergenic | 30.0% |
! | TTTTATTGTATGGAACTGTC+GGG | + | chr6.2:22791841-22791860 | MS.gene98756:intron | 30.0% |
!! | AAAACATTTTGGTACAGAGA+AGG | + | chr6.2:22792859-22792878 | MS.gene98756:intron | 30.0% |
!! | AAACATTTTGGTACAGAGAA+GGG | + | chr6.2:22792860-22792879 | MS.gene98756:intron | 30.0% |
!! | AATTTGTTAAAGATCGGATC+TGG | + | chr6.2:22794132-22794151 | MS.gene98756:intron | 30.0% |
!! | ATTTCACTAATGAAAGTGCT+CGG | - | chr6.2:22794269-22794288 | None:intergenic | 30.0% |
!! | GTTTTATTGTATGGAACTGT+CGG | + | chr6.2:22791840-22791859 | MS.gene98756:intron | 30.0% |
!! | TACTTTCACAAAGGCATTAA+AGG | + | chr6.2:22789706-22789725 | MS.gene98756:CDS | 30.0% |
!! | TCTTTTCAAGCCAAATACAA+AGG | + | chr6.2:22794727-22794746 | MS.gene98756:intron | 30.0% |
!!! | AGTGAGTATTGGATTCATTT+TGG | - | chr6.2:22790438-22790457 | None:intergenic | 30.0% |
!!! | CAGAATTTTTGGAATATGTG+TGG | + | chr6.2:22793204-22793223 | MS.gene98756:intron | 30.0% |
!!! | CATTTTTAAGTCTGTTAGCA+AGG | - | chr6.2:22793398-22793417 | None:intergenic | 30.0% |
!!! | GTCTTTCGATTCTTGTTTTA+CGG | + | chr6.2:22791988-22792007 | MS.gene98756:intron | 30.0% |
!!! | GTGAGTATTGGATTCATTTT+GGG | - | chr6.2:22790437-22790456 | None:intergenic | 30.0% |
!!! | GTTTTTAAGTACGAAAACCT+TGG | + | chr6.2:22790979-22790998 | MS.gene98756:CDS | 30.0% |
!!! | TCTTTTGTGCTTATTTTGAG+TGG | - | chr6.2:22791621-22791640 | None:intergenic | 30.0% |
!!! | TGTTTTACGGTTGATAGAAT+TGG | + | chr6.2:22792001-22792020 | MS.gene98756:intron | 30.0% |
AAAAATTCTGATAGAAGCCG+GGG | - | chr6.2:22793194-22793213 | None:intergenic | 35.0% | |
AACAGTCATCTGCAAAAAGA+AGG | - | chr6.2:22793872-22793891 | None:intergenic | 35.0% | |
AACTTGTGATCAAGGTAAAG+AGG | - | chr6.2:22790384-22790403 | None:intergenic | 35.0% | |
AAGTTAATGCAATCTCTGGA+TGG | + | chr6.2:22790035-22790054 | MS.gene98756:CDS | 35.0% | |
ACAGATGCGAGAAATAATCA+CGG | - | chr6.2:22793008-22793027 | None:intergenic | 35.0% | |
AGGTTGAGAGTTAATTAAGC+TGG | - | chr6.2:22791568-22791587 | None:intergenic | 35.0% | |
AGTAAGATTCATAGTCGAGT+CGG | + | chr6.2:22791216-22791235 | MS.gene98756:CDS | 35.0% | |
ATAACCTGCACTTCTGTAAT+AGG | - | chr6.2:22794683-22794702 | None:intergenic | 35.0% | |
ATGAAGAGATAAGGTGATAG+CGG | - | chr6.2:22793750-22793769 | None:intergenic | 35.0% | |
ATGCAGATATGCATTTGTCA+AGG | - | chr6.2:22793422-22793441 | None:intergenic | 35.0% | |
ATGGAAGAAGAAAAGAATCG+TGG | + | chr6.2:22792167-22792186 | MS.gene98756:intron | 35.0% | |
ATTCAAATGGCGTTGTTTGT+CGG | + | chr6.2:22792956-22792975 | MS.gene98756:intron | 35.0% | |
CAAAAATTCTGATAGAAGCC+GGG | - | chr6.2:22793195-22793214 | None:intergenic | 35.0% | |
CAAATACCTTGCAAAGAATG+AGG | - | chr6.2:22790100-22790119 | None:intergenic | 35.0% | |
CAAGAACTTCTTCTTTACCA+TGG | + | chr6.2:22792209-22792228 | MS.gene98756:intron | 35.0% | |
CAATGTTGAGATAGGAAATG+TGG | - | chr6.2:22790138-22790157 | None:intergenic | 35.0% | |
CACAAAACAGTAGCAATGAA+TGG | + | chr6.2:22791301-22791320 | MS.gene98756:CDS | 35.0% | |
CATTGAAATCTGCACTGAAA+GGG | - | chr6.2:22791338-22791357 | None:intergenic | 35.0% | |
CCAAAAATTCTGATAGAAGC+CGG | - | chr6.2:22793196-22793215 | None:intergenic | 35.0% | |
CCATCTGACACATTATATCA+CGG | - | chr6.2:22793605-22793624 | None:intergenic | 35.0% | |
CGTGATATAATGTGTCAGAT+GGG | + | chr6.2:22793603-22793622 | MS.gene98756:intron | 35.0% | |
GAAAATGCTCATGACATATG+AGG | - | chr6.2:22794240-22794259 | None:intergenic | 35.0% | |
GAAGAACCCAATACAAACTA+TGG | + | chr6.2:22791500-22791519 | MS.gene98756:CDS | 35.0% | |
GAGCACTTGTAAATTCTGAT+TGG | + | chr6.2:22792428-22792447 | MS.gene98756:intron | 35.0% | |
GATTCAGCCATAAATCCAAA+GGG | - | chr6.2:22790790-22790809 | None:intergenic | 35.0% | |
GGATTTATGGCTGAATCAAT+GGG | + | chr6.2:22790793-22790812 | MS.gene98756:CDS | 35.0% | |
GGCAATTTAATGCTGTCTAA+TGG | + | chr6.2:22789848-22789867 | MS.gene98756:CDS | 35.0% | |
GGCAATTTCTGCTATATTTG+TGG | + | chr6.2:22791000-22791019 | MS.gene98756:CDS | 35.0% | |
GTTAGAGATAATCTTAAGCG+TGG | + | chr6.2:22794578-22794597 | MS.gene98756:intron | 35.0% | |
GTTGTGAATCATGTATAGGA+AGG | - | chr6.2:22789985-22790004 | None:intergenic | 35.0% | |
TAATGTAGTCTACAAGATGG+TGG | + | chr6.2:22793365-22793384 | MS.gene98756:intron | 35.0% | |
TACTTAAAAACCACGGTTAC+TGG | - | chr6.2:22790970-22790989 | None:intergenic | 35.0% | |
TAGTAGAGTTCAAATGTGGA+GGG | - | chr6.2:22793278-22793297 | None:intergenic | 35.0% | |
TATCAACCTCATTCTTTGCA+AGG | + | chr6.2:22790091-22790110 | MS.gene98756:CDS | 35.0% | |
TATTGAAGGACCAAAGAAGT+GGG | + | chr6.2:22791074-22791093 | MS.gene98756:CDS | 35.0% | |
TCAGACAGAAATATTCCTTC+CGG | - | chr6.2:22791923-22791942 | None:intergenic | 35.0% | |
TCATGGCCAAATTAAAAGCT+CGG | - | chr6.2:22794415-22794434 | None:intergenic | 35.0% | |
TCATTCCACTCCTTTGTATT+TGG | - | chr6.2:22794740-22794759 | None:intergenic | 35.0% | |
TCTTTACCATGGTGTGTTAT+CGG | + | chr6.2:22792220-22792239 | MS.gene98756:intron | 35.0% | |
TGAAAGCGATAATGTAATGG+CGG | + | chr6.2:22791785-22791804 | MS.gene98756:intron | 35.0% | |
TGATTCAGCCATAAATCCAA+AGG | - | chr6.2:22790791-22790810 | None:intergenic | 35.0% | |
TGGAAGAAGAAAAGAATCGT+GGG | + | chr6.2:22792168-22792187 | MS.gene98756:intron | 35.0% | |
TGGATTTATGGCTGAATCAA+TGG | + | chr6.2:22790792-22790811 | MS.gene98756:CDS | 35.0% | |
TTAGTAGAGTTCAAATGTGG+AGG | - | chr6.2:22793279-22793298 | None:intergenic | 35.0% | |
TTATTGAAGGACCAAAGAAG+TGG | + | chr6.2:22791073-22791092 | MS.gene98756:CDS | 35.0% | |
TTCACTTGGTTCAAAAGTCT+CGG | + | chr6.2:22792373-22792392 | MS.gene98756:intron | 35.0% | |
TTCTCTAGCAATAGATAGTC+AGG | + | chr6.2:22791734-22791753 | MS.gene98756:intron | 35.0% | |
TTTATTGTATGGAACTGTCG+GGG | + | chr6.2:22791842-22791861 | MS.gene98756:intron | 35.0% | |
! | AAAAGAAGGTGTGAAATAGC+TGG | - | chr6.2:22793858-22793877 | None:intergenic | 35.0% |
! | AAATCCTGCTTCAAACCTTT+TGG | - | chr6.2:22791055-22791074 | None:intergenic | 35.0% |
! | AATCCTGCTTCAAACCTTTT+GGG | - | chr6.2:22791054-22791073 | None:intergenic | 35.0% |
! | AGCAAAGGGCAAAAACATTT+TGG | + | chr6.2:22792848-22792867 | MS.gene98756:intron | 35.0% |
! | AGCAGTGTTTGGAATTTGAA+AGG | + | chr6.2:22790932-22790951 | MS.gene98756:CDS | 35.0% |
! | AGTCTTGTGCCATATATGTA+AGG | + | chr6.2:22789519-22789538 | MS.gene98756:CDS | 35.0% |
! | ATGGAAAGAGTTTTACACAC+GGG | + | chr6.2:22790652-22790671 | MS.gene98756:CDS | 35.0% |
! | ATTTCAGCAGTTTTCCAACA+TGG | - | chr6.2:22790834-22790853 | None:intergenic | 35.0% |
! | CAACGCCATTTGAATTTTCA+AGG | - | chr6.2:22792951-22792970 | None:intergenic | 35.0% |
! | GCAGTGTTTGGAATTTGAAA+GGG | + | chr6.2:22790933-22790952 | MS.gene98756:CDS | 35.0% |
! | GCTTTAAGTTTGAAAATGCG+TGG | + | chr6.2:22792563-22792582 | MS.gene98756:CDS | 35.0% |
! | GGAATCTCCATAGTTTGTAT+TGG | - | chr6.2:22791510-22791529 | None:intergenic | 35.0% |
! | GTGTCGCTATTTAAACAAGT+AGG | - | chr6.2:22790307-22790326 | None:intergenic | 35.0% |
! | TAAAACTCATTTTCCTTGGC+GGG | - | chr6.2:22791826-22791845 | None:intergenic | 35.0% |
! | TAAGAGTGCAATGTTGAGAT+AGG | - | chr6.2:22790146-22790165 | None:intergenic | 35.0% |
! | TCTGGAATAGAATCAACTCT+TGG | + | chr6.2:22794150-22794169 | MS.gene98756:intron | 35.0% |
! | TGCACTTGTTGCTTAAAATC+AGG | - | chr6.2:22792598-22792617 | None:intergenic | 35.0% |
! | TGCTATATTTGTGGATTGCT+AGG | + | chr6.2:22791009-22791028 | MS.gene98756:CDS | 35.0% |
! | TGTTTGGAATTTGAAAGGGA+AGG | + | chr6.2:22790937-22790956 | MS.gene98756:CDS | 35.0% |
! | TTGTACAGGATGATCTTTTC+TGG | + | chr6.2:22792824-22792843 | MS.gene98756:intron | 35.0% |
!! | AACATTTTGGTACAGAGAAG+GGG | + | chr6.2:22792861-22792880 | MS.gene98756:intron | 35.0% |
!! | AAGTCTCCGAGCTTTTAATT+TGG | + | chr6.2:22794406-22794425 | MS.gene98756:intron | 35.0% |
!! | AATCCTTGATAATGCACTTG+TGG | + | chr6.2:22793470-22793489 | MS.gene98756:intron | 35.0% |
!! | AGTATTGGATTCATTTTGGG+AGG | - | chr6.2:22790434-22790453 | None:intergenic | 35.0% |
!! | ATGATCTTTTCTGGAAGCAA+AGG | + | chr6.2:22792833-22792852 | MS.gene98756:intron | 35.0% |
!! | CATGTAAATCAGTGTTGGTT+TGG | - | chr6.2:22790477-22790496 | None:intergenic | 35.0% |
!! | GAAGTGGATGATTTGTTGAT+TGG | + | chr6.2:22792106-22792125 | MS.gene98756:intron | 35.0% |
!! | GACTGTTGATTACACAGTTT+TGG | + | chr6.2:22793668-22793687 | MS.gene98756:intron | 35.0% |
!! | GATTACACAGTTTTGGTCAA+TGG | + | chr6.2:22793675-22793694 | MS.gene98756:intron | 35.0% |
!! | GTATTGGATTCATTTTGGGA+GGG | - | chr6.2:22790433-22790452 | None:intergenic | 35.0% |
!! | TACGGTTGATAGAATTGGTA+GGG | + | chr6.2:22792006-22792025 | MS.gene98756:intron | 35.0% |
!! | TCTAAAGTGGAGTATTGGAA+CGG | + | chr6.2:22794601-22794620 | MS.gene98756:intron | 35.0% |
!! | TGATCTTTTCTGGAAGCAAA+GGG | + | chr6.2:22792834-22792853 | MS.gene98756:intron | 35.0% |
!! | TTACGGTTGATAGAATTGGT+AGG | + | chr6.2:22792005-22792024 | MS.gene98756:intron | 35.0% |
!!! | CTTTTTCAGTTCTTCGATCA+GGG | + | chr6.2:22790625-22790644 | MS.gene98756:CDS | 35.0% |
!!! | GCTTTTAATTTGGCCATGAT+TGG | + | chr6.2:22794416-22794435 | MS.gene98756:intron | 35.0% |
!!! | TTTTGTTGTTGCACAAGAAC+AGG | - | chr6.2:22791531-22791550 | None:intergenic | 35.0% |
AAACTCCTCCAGACATAACT+TGG | - | chr6.2:22794551-22794570 | None:intergenic | 40.0% | |
AAATCTCCGATAACACACCA+TGG | - | chr6.2:22792229-22792248 | None:intergenic | 40.0% | |
AACTCCTCCAGACATAACTT+GGG | - | chr6.2:22794550-22794569 | None:intergenic | 40.0% | |
AAGGACTATCTGCTCTCATT+AGG | + | chr6.2:22793781-22793800 | MS.gene98756:intron | 40.0% | |
AATCGTATCGCAACAACTCT+CGG | + | chr6.2:22794032-22794051 | MS.gene98756:intron | 40.0% | |
AATTCCAAACACTGCTTCAG+CGG | - | chr6.2:22790928-22790947 | None:intergenic | 40.0% | |
ACTACATATGAAGCTGCTTC+CGG | + | chr6.2:22793945-22793964 | MS.gene98756:intron | 40.0% | |
AGAGATGGAAGTAGCTACTT+TGG | - | chr6.2:22793067-22793086 | None:intergenic | 40.0% | |
AGAGATGTGCAAGTCTGTTT+CGG | - | chr6.2:22790555-22790574 | None:intergenic | 40.0% | |
AGGACTATCTGCTCTCATTA+GGG | + | chr6.2:22793782-22793801 | MS.gene98756:intron | 40.0% | |
AGTCCTTCACATACCAGATT+TGG | + | chr6.2:22789746-22789765 | MS.gene98756:CDS | 40.0% | |
AGTTTAGTGATCAGTGACTC+CGG | - | chr6.2:22794470-22794489 | None:intergenic | 40.0% | |
ATACGATTCTGGCAATCTGA+GGG | - | chr6.2:22794020-22794039 | None:intergenic | 40.0% | |
ATCTTAAGCGTGGTCTAAAG+TGG | + | chr6.2:22794588-22794607 | MS.gene98756:intron | 40.0% | |
ATGCAGAATTGCTCCAAATC+TGG | - | chr6.2:22789762-22789781 | None:intergenic | 40.0% | |
ATTGAAGGACCAAAGAAGTG+GGG | + | chr6.2:22791075-22791094 | MS.gene98756:CDS | 40.0% | |
ATTGGAAAATGGCGATTGAC+TGG | + | chr6.2:22792124-22792143 | MS.gene98756:intron | 40.0% | |
ATTGTGGCTCACTTGCAAAT+CGG | + | chr6.2:22792513-22792532 | MS.gene98756:CDS | 40.0% | |
ATTTGCAAGTGAGCCACAAT+GGG | - | chr6.2:22792513-22792532 | None:intergenic | 40.0% | |
CAACATGGTTTCCCAAAAGA+TGG | - | chr6.2:22790819-22790838 | None:intergenic | 40.0% | |
CAATGTAAATGCCGCAGTTA+AGG | - | chr6.2:22793106-22793125 | None:intergenic | 40.0% | |
CAGATGCGAGAAATAATCAC+GGG | - | chr6.2:22793007-22793026 | None:intergenic | 40.0% | |
CATCTGAAGAGAAGAAAGGT+AGG | + | chr6.2:22792263-22792282 | MS.gene98756:intron | 40.0% | |
CCGTGATATAATGTGTCAGA+TGG | + | chr6.2:22793602-22793621 | MS.gene98756:intron | 40.0% | |
CCTGATCGAAGAACTGAAAA+AGG | - | chr6.2:22790627-22790646 | None:intergenic | 40.0% | |
CGGAGATTTCAACGACATAT+TGG | + | chr6.2:22792240-22792259 | MS.gene98756:intron | 40.0% | |
CTATGAATCTTACTGCAAGC+TGG | - | chr6.2:22791210-22791229 | None:intergenic | 40.0% | |
CTGCTAGTTGGAGTATGTTT+GGG | - | chr6.2:22791398-22791417 | None:intergenic | 40.0% | |
CTGTACTACCATGCAATCAA+AGG | + | chr6.2:22789782-22789801 | MS.gene98756:CDS | 40.0% | |
CTTAACTGCGGCATTTACAT+TGG | + | chr6.2:22793104-22793123 | MS.gene98756:intron | 40.0% | |
CTTCTGATCATTACCCATTG+TGG | + | chr6.2:22792497-22792516 | MS.gene98756:CDS | 40.0% | |
GAAGAACAAGTATGGAGGTT+GGG | + | chr6.2:22789541-22789560 | MS.gene98756:CDS | 40.0% | |
GAATTTCAAGGTCCTCAAGA+AGG | + | chr6.2:22791114-22791133 | MS.gene98756:CDS | 40.0% | |
GATGCTGTTCAGACAAACAT+AGG | + | chr6.2:22791711-22791730 | MS.gene98756:CDS | 40.0% | |
GCACAGAGAATGAAGAGATA+AGG | - | chr6.2:22793759-22793778 | None:intergenic | 40.0% | |
GCAGCTTTCATGACAAGTAA+AGG | + | chr6.2:22789827-22789846 | MS.gene98756:CDS | 40.0% | |
GCAGTCATGTAAATCAGTGT+TGG | - | chr6.2:22790482-22790501 | None:intergenic | 40.0% | |
GCATTGAAATCTGCACTGAA+AGG | - | chr6.2:22791339-22791358 | None:intergenic | 40.0% | |
GTAAGATTCATAGTCGAGTC+GGG | + | chr6.2:22791217-22791236 | MS.gene98756:CDS | 40.0% | |
GTAAGGAAGAACAAGTATGG+AGG | + | chr6.2:22789536-22789555 | MS.gene98756:CDS | 40.0% | |
GTTATGTCTGGAGGAGTTTA+TGG | + | chr6.2:22794552-22794571 | MS.gene98756:intron | 40.0% | |
GTTGCATCCATTTGTTTGTC+AGG | - | chr6.2:22790583-22790602 | None:intergenic | 40.0% | |
GTTGGACAAGTTACTTGTAC+AGG | + | chr6.2:22792810-22792829 | MS.gene98756:intron | 40.0% | |
TAAATAGCGACACTCAGAAG+AGG | + | chr6.2:22790314-22790333 | MS.gene98756:CDS | 40.0% | |
TAACCTGCCCTTTGGATTTA+TGG | + | chr6.2:22790780-22790799 | MS.gene98756:CDS | 40.0% | |
TAACGTTCATGGTGACTCTA+AGG | - | chr6.2:22790900-22790919 | None:intergenic | 40.0% | |
TAAGGAATATAGAGCAAGGG+AGG | + | chr6.2:22789930-22789949 | MS.gene98756:CDS | 40.0% | |
TAGCCACAAGTGCATTATCA+AGG | - | chr6.2:22793476-22793495 | None:intergenic | 40.0% | |
TATTACGACTCCAATCAGTC+AGG | - | chr6.2:22792684-22792703 | None:intergenic | 40.0% | |
TCAAGCCAAATACAAAGGAG+TGG | + | chr6.2:22794732-22794751 | MS.gene98756:intron | 40.0% | |
TCAGTGCAGATTTCAATGCT+TGG | + | chr6.2:22791340-22791359 | MS.gene98756:CDS | 40.0% | |
TCGGTCTTCCATCAATGATA+GGG | + | chr6.2:22794087-22794106 | MS.gene98756:intron | 40.0% | |
TCTGACACATTATATCACGG+AGG | - | chr6.2:22793602-22793621 | None:intergenic | 40.0% | |
TCTTCATTACCGATGCTTCT+TGG | - | chr6.2:22793917-22793936 | None:intergenic | 40.0% | |
TGAAGAGATAAGGTGATAGC+GGG | - | chr6.2:22793749-22793768 | None:intergenic | 40.0% | |
TGATTTACATGACTGCTGTC+TGG | + | chr6.2:22790486-22790505 | MS.gene98756:CDS | 40.0% | |
TGGTAGAAACTCTGTCACAA+AGG | + | chr6.2:22791251-22791270 | MS.gene98756:CDS | 40.0% | |
TGTAACATGTTCCCAAATGC+AGG | + | chr6.2:22792451-22792470 | MS.gene98756:intron | 40.0% | |
TGTTTCGGATAGCATGAAAG+CGG | - | chr6.2:22790540-22790559 | None:intergenic | 40.0% | |
TTATCAAGGATTGATCTGCC+TGG | - | chr6.2:22793462-22793481 | None:intergenic | 40.0% | |
TTGCAAATTGATCGCTTGAC+CGG | - | chr6.2:22793967-22793986 | None:intergenic | 40.0% | |
TTGGCATCTGAAGAGAAGAA+AGG | + | chr6.2:22792259-22792278 | MS.gene98756:intron | 40.0% | |
! | AGATGGGATTTTCAGAGAAG+TGG | + | chr6.2:22793619-22793638 | MS.gene98756:intron | 40.0% |
! | ATCCTGCTTCAAACCTTTTG+GGG | - | chr6.2:22791053-22791072 | None:intergenic | 40.0% |
! | CCGGCTTCTATCAGAATTTT+TGG | + | chr6.2:22793193-22793212 | MS.gene98756:intron | 40.0% |
! | CTGTTTGACTTACACATGAC+TGG | + | chr6.2:22792343-22792362 | MS.gene98756:intron | 40.0% |
! | GAATCAATGGGCCATCTTTT+GGG | + | chr6.2:22790805-22790824 | MS.gene98756:CDS | 40.0% |
! | TACAGAAGTGCAGGTTATGT+GGG | + | chr6.2:22794685-22794704 | MS.gene98756:intron | 40.0% |
! | TGAATCAATGGGCCATCTTT+TGG | + | chr6.2:22790804-22790823 | MS.gene98756:CDS | 40.0% |
! | TGACTGGTTATGCTTTCACT+TGG | + | chr6.2:22792359-22792378 | MS.gene98756:intron | 40.0% |
! | TGACTTGTACTCATCATAGC+TGG | - | chr6.2:22789648-22789667 | None:intergenic | 40.0% |
! | TTACAGAAGTGCAGGTTATG+TGG | + | chr6.2:22794684-22794703 | MS.gene98756:intron | 40.0% |
! | TTCCTTCCGGTTTGTATGTT+CGG | - | chr6.2:22791910-22791929 | None:intergenic | 40.0% |
! | TTTCAGAGAAGTGGATTCGA+TGG | + | chr6.2:22793628-22793647 | MS.gene98756:intron | 40.0% |
! | TTTTATGGGATGCCGGAAAA+TGG | + | chr6.2:22792148-22792167 | MS.gene98756:intron | 40.0% |
! | TTTTGCGTGATACCTTCTTC+AGG | - | chr6.2:22792640-22792659 | None:intergenic | 40.0% |
!! | ACGGTTGATAGAATTGGTAG+GGG | + | chr6.2:22792007-22792026 | MS.gene98756:intron | 40.0% |
!! | AGTTTTGGTCAATGGTGTAC+AGG | + | chr6.2:22793683-22793702 | MS.gene98756:intron | 40.0% |
!! | CATCTTTTGGGAAACCATGT+TGG | + | chr6.2:22790817-22790836 | MS.gene98756:CDS | 40.0% |
!! | CCTAAGACTTTTGGAGGAAT+GGG | + | chr6.2:22794377-22794396 | MS.gene98756:intron | 40.0% |
!! | CTAAAGTGGAGTATTGGAAC+GGG | + | chr6.2:22794602-22794621 | MS.gene98756:intron | 40.0% |
!! | TAATGAAAGTGCTCGGTAGA+AGG | - | chr6.2:22794262-22794281 | None:intergenic | 40.0% |
!! | TCCTAAGACTTTTGGAGGAA+TGG | + | chr6.2:22794376-22794395 | MS.gene98756:intron | 40.0% |
!!! | CCTTTTTCAGTTCTTCGATC+AGG | + | chr6.2:22790624-22790643 | MS.gene98756:CDS | 40.0% |
!!! | GGCGATTGACTGGTTTTTAT+GGG | + | chr6.2:22792134-22792153 | MS.gene98756:intron | 40.0% |
!!! | TGGCGATTGACTGGTTTTTA+TGG | + | chr6.2:22792133-22792152 | MS.gene98756:intron | 40.0% |
AAACTTGGTCCCCACTTCTT+TGG | - | chr6.2:22791087-22791106 | None:intergenic | 45.0% | |
ACAACCCAAGTTATGTCTGG+AGG | + | chr6.2:22794543-22794562 | MS.gene98756:intron | 45.0% | |
ACTCCAATCAGTCAGGTCTT+CGG | - | chr6.2:22792677-22792696 | None:intergenic | 45.0% | |
ACTTGAGAGCAACATCACCT+TGG | - | chr6.2:22793539-22793558 | None:intergenic | 45.0% | |
AGAAGATGCTTAACGCCTTC+TGG | + | chr6.2:22794291-22794310 | MS.gene98756:intron | 45.0% | |
AGCAGGTGTTTATCACAAGC+AGG | + | chr6.2:22794176-22794195 | MS.gene98756:intron | 45.0% | |
AGGCATTCAACACCTGCATT+TGG | - | chr6.2:22792466-22792485 | None:intergenic | 45.0% | |
AGGGTAACTGTCAAAATGCC+AGG | - | chr6.2:22790680-22790699 | None:intergenic | 45.0% | |
ATACTCCAACTAGCAGGAAC+GGG | + | chr6.2:22791402-22791421 | MS.gene98756:CDS | 45.0% | |
ATCAGGCTGAGAGTGAGTAT+TGG | - | chr6.2:22790449-22790468 | None:intergenic | 45.0% | |
ATCGTATCGCAACAACTCTC+GGG | + | chr6.2:22794033-22794052 | MS.gene98756:intron | 45.0% | |
ATGCACCAACCTTGCAATTC+TGG | - | chr6.2:22791469-22791488 | None:intergenic | 45.0% | |
ATTACATCTGCACGAGTGCT+TGG | - | chr6.2:22793042-22793061 | None:intergenic | 45.0% | |
CAAAAGTCTTAGGAACCGAG+AGG | - | chr6.2:22794370-22794389 | None:intergenic | 45.0% | |
CACAACTCTACAACTTCACG+AGG | + | chr6.2:22794320-22794339 | MS.gene98756:intron | 45.0% | |
CAGCGGTTCATTAACGTTCA+TGG | - | chr6.2:22790911-22790930 | None:intergenic | 45.0% | |
CATACTCCAACTAGCAGGAA+CGG | + | chr6.2:22791401-22791420 | MS.gene98756:CDS | 45.0% | |
CCAAACATACTCCAACTAGC+AGG | + | chr6.2:22791396-22791415 | MS.gene98756:CDS | 45.0% | |
CCCATTCCTCCAAAAGTCTT+AGG | - | chr6.2:22794380-22794399 | None:intergenic | 45.0% | |
CCTGCTAGTTGGAGTATGTT+TGG | - | chr6.2:22791399-22791418 | None:intergenic | 45.0% | |
CCTTGTCCGAACATACAAAC+CGG | + | chr6.2:22791901-22791920 | MS.gene98756:intron | 45.0% | |
CGAGTCGGGAAAGTTAAGAT+TGG | + | chr6.2:22791231-22791250 | MS.gene98756:CDS | 45.0% | |
CTATCGACACGATGGACATA+TGG | + | chr6.2:22790746-22790765 | MS.gene98756:CDS | 45.0% | |
CTCAGACAACCATGAAAGAC+TGG | + | chr6.2:22793325-22793344 | MS.gene98756:intron | 45.0% | |
CTCGGTCTTCCATCAATGAT+AGG | + | chr6.2:22794086-22794105 | MS.gene98756:intron | 45.0% | |
CTCTTCATTCTCTGTGCTGA+AGG | + | chr6.2:22793762-22793781 | MS.gene98756:intron | 45.0% | |
CTTGAGAGCAACATCACCTT+GGG | - | chr6.2:22793538-22793557 | None:intergenic | 45.0% | |
GAAACAGACTTGCACATCTC+TGG | + | chr6.2:22790554-22790573 | MS.gene98756:CDS | 45.0% | |
GAATATAGAGCAAGGGAGGA+GGG | + | chr6.2:22789934-22789953 | MS.gene98756:CDS | 45.0% | |
GACAAGAAACAGGTGCACAA+AGG | + | chr6.2:22791166-22791185 | MS.gene98756:CDS | 45.0% | |
GACACAACCCAAGTTATGTC+TGG | + | chr6.2:22794540-22794559 | MS.gene98756:intron | 45.0% | |
GAGTTGTTGCGATACGATTC+TGG | - | chr6.2:22794031-22794050 | None:intergenic | 45.0% | |
GATACGATTCTGGCAATCTG+AGG | - | chr6.2:22794021-22794040 | None:intergenic | 45.0% | |
GATCAGAAGATGTCGTCGAA+AGG | - | chr6.2:22792486-22792505 | None:intergenic | 45.0% | |
GATTTGCAAGTGAGCCACAA+TGG | - | chr6.2:22792514-22792533 | None:intergenic | 45.0% | |
GCAAAAACAAAAGGGACCCA+AGG | + | chr6.2:22793519-22793538 | MS.gene98756:intron | 45.0% | |
GCAGGTGTTTATCACAAGCA+GGG | + | chr6.2:22794177-22794196 | MS.gene98756:intron | 45.0% | |
GCTCCAAATCTGGTATGTGA+AGG | - | chr6.2:22789752-22789771 | None:intergenic | 45.0% | |
GGAAGAACAAGTATGGAGGT+TGG | + | chr6.2:22789540-22789559 | MS.gene98756:CDS | 45.0% | |
GGCATTCAACACCTGCATTT+GGG | - | chr6.2:22792465-22792484 | None:intergenic | 45.0% | |
GGGTAACTGTCAAAATGCCA+GGG | - | chr6.2:22790679-22790698 | None:intergenic | 45.0% | |
GGTGACAGAACTTGTGATCA+AGG | - | chr6.2:22790392-22790411 | None:intergenic | 45.0% | |
GTAATAGGCTGGAGACAAAG+CGG | - | chr6.2:22794668-22794687 | None:intergenic | 45.0% | |
GTCTGAACAGCATCAACATC+AGG | - | chr6.2:22791705-22791724 | None:intergenic | 45.0% | |
GTCTTCCATCAATGATAGGG+AGG | + | chr6.2:22794090-22794109 | MS.gene98756:intron | 45.0% | |
GTGAAGGACTCATACAGCAT+GGG | - | chr6.2:22789736-22789755 | None:intergenic | 45.0% | |
GTGTTTATCACAAGCAGGGA+GGG | + | chr6.2:22794181-22794200 | MS.gene98756:intron | 45.0% | |
GTTCTTCGATCAGGGAGAAA+TGG | + | chr6.2:22790633-22790652 | MS.gene98756:CDS | 45.0% | |
GTTTAGTGATCAGTGACTCC+GGG | - | chr6.2:22794469-22794488 | None:intergenic | 45.0% | |
TAAAGCAGCTAAAGCGAAGC+CGG | + | chr6.2:22791649-22791668 | MS.gene98756:CDS | 45.0% | |
TACATGACTGCTGTCTGGTT+GGG | + | chr6.2:22790491-22790510 | MS.gene98756:CDS | 45.0% | |
TAGCTTCTCTTCAACAGCTC+TGG | - | chr6.2:22792404-22792423 | None:intergenic | 45.0% | |
TGATCTGCCTGGAACAAAAG+CGG | - | chr6.2:22793451-22793470 | None:intergenic | 45.0% | |
TGGAACAGAAATGTTGCTGC+TGG | + | chr6.2:22789868-22789887 | MS.gene98756:CDS | 45.0% | |
TGGAAGCTCTATCCTGAAGA+AGG | + | chr6.2:22792625-22792644 | MS.gene98756:CDS | 45.0% | |
TGTGAAGGACTCATACAGCA+TGG | - | chr6.2:22789737-22789756 | None:intergenic | 45.0% | |
TTACATCTGCACGAGTGCTT+GGG | - | chr6.2:22793041-22793060 | None:intergenic | 45.0% | |
TTACATGACTGCTGTCTGGT+TGG | + | chr6.2:22790490-22790509 | MS.gene98756:CDS | 45.0% | |
TTGCTCCTCCCTATCATTGA+TGG | - | chr6.2:22794098-22794117 | None:intergenic | 45.0% | |
TTGGGAACAGGCAAGTATCT+CGG | + | chr6.2:22794068-22794087 | MS.gene98756:intron | 45.0% | |
TTGGTCAATGGTGTACAGGT+TGG | + | chr6.2:22793687-22793706 | MS.gene98756:intron | 45.0% | |
TTGTCTGAGCATCACCCTTT+GGG | - | chr6.2:22793314-22793333 | None:intergenic | 45.0% | |
TTTCAAGGTCCTCAAGAAGG+AGG | + | chr6.2:22791117-22791136 | MS.gene98756:CDS | 45.0% | |
TTTCAGTGTGGAATCAACCG+TGG | + | chr6.2:22794633-22794652 | MS.gene98756:intron | 45.0% | |
TTTCTTGTCTTCGCAGCCAA+GGG | - | chr6.2:22791155-22791174 | None:intergenic | 45.0% | |
TTTGGCCATGATTGGAAAGC+AGG | + | chr6.2:22794424-22794443 | MS.gene98756:intron | 45.0% | |
! | AAGTATGGAGGTTGGGTTGT+AGG | + | chr6.2:22789548-22789567 | MS.gene98756:CDS | 45.0% |
! | AATCAAAGGCGCAAAAGGAG+GGG | + | chr6.2:22789796-22789815 | MS.gene98756:CDS | 45.0% |
! | AGCTTCTGACCAAGAAGCAT+CGG | + | chr6.2:22793905-22793924 | MS.gene98756:intron | 45.0% |
! | CAAAGCGGATCTTTTAGCCA+CGG | - | chr6.2:22794653-22794672 | None:intergenic | 45.0% |
! | CAATCAAAGGCGCAAAAGGA+GGG | + | chr6.2:22789795-22789814 | MS.gene98756:CDS | 45.0% |
! | CATATGTCCATCGTGTCGAT+AGG | - | chr6.2:22790748-22790767 | None:intergenic | 45.0% |
! | CATGCAATCAAAGGCGCAAA+AGG | + | chr6.2:22789791-22789810 | MS.gene98756:CDS | 45.0% |
! | CGGTTGATTCCACACTGAAA+TGG | - | chr6.2:22794633-22794652 | None:intergenic | 45.0% |
! | CGTGGTCTAAAGTGGAGTAT+TGG | + | chr6.2:22794596-22794615 | MS.gene98756:intron | 45.0% |
! | CTCTCGGTTCCTAAGACTTT+TGG | + | chr6.2:22794368-22794387 | MS.gene98756:intron | 45.0% |
! | CTTTTGCGCCTTTGATTGCA+TGG | - | chr6.2:22789793-22789812 | None:intergenic | 45.0% |
! | GTTGATAGAATTGGTAGGGG+AGG | + | chr6.2:22792010-22792029 | MS.gene98756:intron | 45.0% |
! | TCGGTTCCTAAGACTTTTGG+AGG | + | chr6.2:22794371-22794390 | MS.gene98756:intron | 45.0% |
!! | AGGCATGCACTGGTTATCTT+GGG | + | chr6.2:22794340-22794359 | MS.gene98756:intron | 45.0% |
!! | CTGATGCTTTTTGCCCCAAA+AGG | + | chr6.2:22791037-22791056 | MS.gene98756:CDS | 45.0% |
!! | CTGGAAGTTGATAAGCAACC+CGG | + | chr6.2:22794448-22794467 | MS.gene98756:intron | 45.0% |
!! | GGGATTTGTTGACATGGTTG+CGG | - | chr6.2:22790413-22790432 | None:intergenic | 45.0% |
!! | GGTCAGAAGCTCTGAAAAAG+AGG | - | chr6.2:22793896-22793915 | None:intergenic | 45.0% |
!! | GTGTTGGTTTGGCTTTGATC+AGG | - | chr6.2:22790466-22790485 | None:intergenic | 45.0% |
!! | TGATGATTCAGGTGCTGAAG+TGG | + | chr6.2:22791674-22791693 | MS.gene98756:CDS | 45.0% |
!! | TTGGGAGGGATTTGTTGACA+TGG | - | chr6.2:22790419-22790438 | None:intergenic | 45.0% |
!!! | GACTGGTTTTTATGGGATGC+CGG | + | chr6.2:22792141-22792160 | MS.gene98756:intron | 45.0% |
!!! | GTGAAGCAAGTTTTGGGAAC+AGG | + | chr6.2:22794056-22794075 | MS.gene98756:intron | 45.0% |
!! | ATAGAAATTAAAAATAAAAA+CGG | + | chr6.2:22790166-22790185 | MS.gene98756:intron | 5.0% |
AAAGCAGCTAAAGCGAAGCC+GGG | + | chr6.2:22791650-22791669 | MS.gene98756:CDS | 50.0% | |
AAGCCGGGGTTAAAACCATC+CGG | - | chr6.2:22793180-22793199 | None:intergenic | 50.0% | |
AATGGGTCGCCAGTCTTTCA+TGG | - | chr6.2:22793337-22793356 | None:intergenic | 50.0% | |
ACACTGCTTGCCTGAAACCA+CGG | - | chr6.2:22792312-22792331 | None:intergenic | 50.0% | |
ACAGGTGCACAAAGGCAGAT+AGG | + | chr6.2:22791174-22791193 | MS.gene98756:CDS | 50.0% | |
AGATGCTTAACGCCTTCTGG+TGG | + | chr6.2:22794294-22794313 | MS.gene98756:intron | 50.0% | |
AGGATGAGGCCAGAATTGCA+AGG | + | chr6.2:22791457-22791476 | MS.gene98756:CDS | 50.0% | |
AGTTGGAGTATGTTTGGGCC+TGG | - | chr6.2:22791393-22791412 | None:intergenic | 50.0% | |
ATGCAAGCAGACAAATGCCC+CGG | + | chr6.2:22793153-22793172 | MS.gene98756:intron | 50.0% | |
ATGCTTAACGCCTTCTGGTG+GGG | + | chr6.2:22794296-22794315 | MS.gene98756:intron | 50.0% | |
ATGTGGGATGCTCTCACTGT+TGG | + | chr6.2:22794701-22794720 | MS.gene98756:intron | 50.0% | |
ATTAGGGATGCTGAGAGACG+CGG | + | chr6.2:22793798-22793817 | MS.gene98756:intron | 50.0% | |
CAAGCTCATAACCTGCCCTT+TGG | + | chr6.2:22790772-22790791 | MS.gene98756:CDS | 50.0% | |
CACTATGCCTATCGACACGA+TGG | + | chr6.2:22790738-22790757 | MS.gene98756:CDS | 50.0% | |
CAGCACCTGAATCATCAACC+CGG | - | chr6.2:22791671-22791690 | None:intergenic | 50.0% | |
CAGCCATAAATCCAAAGGGC+AGG | - | chr6.2:22790786-22790805 | None:intergenic | 50.0% | |
CCTGCACTTCTGTAATAGGC+TGG | - | chr6.2:22794679-22794698 | None:intergenic | 50.0% | |
CGGATAGCATGAAAGCGGAT+AGG | - | chr6.2:22790535-22790554 | None:intergenic | 50.0% | |
CGGGAGAAACCATTTCAGTG+TGG | + | chr6.2:22794621-22794640 | MS.gene98756:intron | 50.0% | |
CGGGTTGCTTATCAACTTCC+AGG | - | chr6.2:22794450-22794469 | None:intergenic | 50.0% | |
CTCAACCTATGGGGCAGATT+AGG | + | chr6.2:22791580-22791599 | MS.gene98756:CDS | 50.0% | |
CTCTGGATGGCAGACTGAAA+AGG | + | chr6.2:22790048-22790067 | MS.gene98756:CDS | 50.0% | |
CTGCTACGCAAGCTTCAGTT+TGG | + | chr6.2:22790703-22790722 | MS.gene98756:CDS | 50.0% | |
CTGGCAGCCTGACAAACAAA+TGG | + | chr6.2:22790573-22790592 | MS.gene98756:CDS | 50.0% | |
GAAGCTTGCGTAGCAGCATA+GGG | - | chr6.2:22790699-22790718 | None:intergenic | 50.0% | |
GAATCAACTCTTGGAGCAGC+AGG | + | chr6.2:22794159-22794178 | MS.gene98756:intron | 50.0% | |
GATAGAATTGGTAGGGGAGG+AGG | + | chr6.2:22792013-22792032 | MS.gene98756:intron | 50.0% | |
GATGCTTAACGCCTTCTGGT+GGG | + | chr6.2:22794295-22794314 | MS.gene98756:intron | 50.0% | |
GGAATATAGAGCAAGGGAGG+AGG | + | chr6.2:22789933-22789952 | MS.gene98756:CDS | 50.0% | |
GGCTGCTGCGTGAAAGAATT+TGG | - | chr6.2:22792896-22792915 | None:intergenic | 50.0% | |
GGCTGTGAATGGCTCGAAAA+TGG | + | chr6.2:22793246-22793265 | MS.gene98756:intron | 50.0% | |
GGTGTTTATCACAAGCAGGG+AGG | + | chr6.2:22794180-22794199 | MS.gene98756:intron | 50.0% | |
GTCATCCTAATCTGCCCCAT+AGG | - | chr6.2:22791588-22791607 | None:intergenic | 50.0% | |
GTCCGAACATACAAACCGGA+AGG | + | chr6.2:22791905-22791924 | MS.gene98756:intron | 50.0% | |
GTGAACACTCCTCCTTCTTG+AGG | - | chr6.2:22791129-22791148 | None:intergenic | 50.0% | |
GTGCACAAAGGCAGATAGGT+GGG | + | chr6.2:22791178-22791197 | MS.gene98756:CDS | 50.0% | |
GTGTGGCAGCGAAATTCACA+AGG | + | chr6.2:22793221-22793240 | MS.gene98756:intron | 50.0% | |
GTTATCTTGGGAACGCCTCT+CGG | + | chr6.2:22794352-22794371 | MS.gene98756:intron | 50.0% | |
GTTGTCTGAGCATCACCCTT+TGG | - | chr6.2:22793315-22793334 | None:intergenic | 50.0% | |
GTTTCTTGTCTTCGCAGCCA+AGG | - | chr6.2:22791156-22791175 | None:intergenic | 50.0% | |
TCATTCCGGGTCGTGGTATT+CGG | + | chr6.2:22793715-22793734 | MS.gene98756:intron | 50.0% | |
TCGTATCGCAACAACTCTCG+GGG | + | chr6.2:22794034-22794053 | MS.gene98756:intron | 50.0% | |
TGAACCGCTGAAGCAGTGTT+TGG | + | chr6.2:22790921-22790940 | MS.gene98756:CDS | 50.0% | |
TGAAGCTTGCGTAGCAGCAT+AGG | - | chr6.2:22790700-22790719 | None:intergenic | 50.0% | |
TGAGAGACGCGGAGTCATTA+CGG | + | chr6.2:22793809-22793828 | MS.gene98756:intron | 50.0% | |
TGAGGCCAGAATTGCAAGGT+TGG | + | chr6.2:22791461-22791480 | MS.gene98756:CDS | 50.0% | |
TGCACAAAGGCAGATAGGTG+GGG | + | chr6.2:22791179-22791198 | MS.gene98756:CDS | 50.0% | |
TGCTGAACAGGAAGAGGATG+AGG | + | chr6.2:22791443-22791462 | MS.gene98756:CDS | 50.0% | |
TGGCGTTGTTTGTCGGAAAG+AGG | + | chr6.2:22792963-22792982 | MS.gene98756:intron | 50.0% | |
TGGCTGCGAAGACAAGAAAC+AGG | + | chr6.2:22791156-22791175 | MS.gene98756:CDS | 50.0% | |
TGGTTTCAGGCAAGCAGTGT+TGG | + | chr6.2:22792312-22792331 | MS.gene98756:intron | 50.0% | |
TGTTCAGCACGCACTTCAGA+AGG | - | chr6.2:22791432-22791451 | None:intergenic | 50.0% | |
TTCACAAGGCAGGCTGTGAA+TGG | + | chr6.2:22793235-22793254 | MS.gene98756:intron | 50.0% | |
TTCAGAGTGGGAACTGTGCT+CGG | - | chr6.2:22791878-22791897 | None:intergenic | 50.0% | |
TTTCAATGCTTGGCCAGTCG+TGG | + | chr6.2:22791350-22791369 | MS.gene98756:CDS | 50.0% | |
! | ACAGGTTGGACCTCTCATTC+CGG | + | chr6.2:22793701-22793720 | MS.gene98756:intron | 50.0% |
! | CCAGCCTATTACAGAAGTGC+AGG | + | chr6.2:22794676-22794695 | MS.gene98756:intron | 50.0% |
! | CCGGTTTGTATGTTCGGACA+AGG | - | chr6.2:22791904-22791923 | None:intergenic | 50.0% |
! | CGGACAAGGTACTTCAGAGT+GGG | - | chr6.2:22791890-22791909 | None:intergenic | 50.0% |
! | CTCGGGGTGAAGCAAGTTTT+GGG | + | chr6.2:22794050-22794069 | MS.gene98756:intron | 50.0% |
! | CTTCTCTTCAACAGCTCTGG+CGG | - | chr6.2:22792401-22792420 | None:intergenic | 50.0% |
! | GAGATTGGAAGAAGGAGTGC+AGG | + | chr6.2:22789392-22789411 | MS.gene98756:CDS | 50.0% |
! | GATAATGTAATGGCGGAGCC+TGG | + | chr6.2:22791792-22791811 | MS.gene98756:intron | 50.0% |
! | GCAATCAAAGGCGCAAAAGG+AGG | + | chr6.2:22789794-22789813 | MS.gene98756:CDS | 50.0% |
! | GTGTCGATAGGCATAGTGAG+TGG | - | chr6.2:22790736-22790755 | None:intergenic | 50.0% |
! | TATGGAGGTTGGGTTGTAGG+AGG | + | chr6.2:22789551-22789570 | MS.gene98756:CDS | 50.0% |
! | TCGGACAAGGTACTTCAGAG+TGG | - | chr6.2:22791891-22791910 | None:intergenic | 50.0% |
! | TCTCGGGGTGAAGCAAGTTT+TGG | + | chr6.2:22794049-22794068 | MS.gene98756:intron | 50.0% |
! | TGCCCCAAAAGGTTTGAAGC+AGG | + | chr6.2:22791048-22791067 | MS.gene98756:CDS | 50.0% |
!! | GAGGAGGCTTGGCTTTTCTT+TGG | + | chr6.2:22792029-22792048 | MS.gene98756:intron | 50.0% |
!! | GAGGAGTGTTCACAAACCCT+TGG | + | chr6.2:22791136-22791155 | MS.gene98756:CDS | 50.0% |
!! | GAGGCATGCACTGGTTATCT+TGG | + | chr6.2:22794339-22794358 | MS.gene98756:intron | 50.0% |
!! | GTTCACTTTTCTGCGTGAGG+TGG | - | chr6.2:22792917-22792936 | None:intergenic | 50.0% |
!! | TCGGTTCACTTTTCTGCGTG+AGG | - | chr6.2:22792920-22792939 | None:intergenic | 50.0% |
!! | TGGGGCAAAAAGCATCAGTG+TGG | - | chr6.2:22791035-22791054 | None:intergenic | 50.0% |
!! | TTCTGAAGTGCGTGCTGAAC+AGG | + | chr6.2:22791431-22791450 | MS.gene98756:CDS | 50.0% |
AATTGGTAGGGGAGGAGGCT+TGG | + | chr6.2:22792018-22792037 | MS.gene98756:intron | 55.0% | |
ACTGCTGTCTGGTTGGGAGA+TGG | + | chr6.2:22790497-22790516 | MS.gene98756:CDS | 55.0% | |
AGAGTTGTGACCCCACCAGA+AGG | - | chr6.2:22794309-22794328 | None:intergenic | 55.0% | |
AGCAACAAGTGCAGCAACGC+TGG | + | chr6.2:22792605-22792624 | MS.gene98756:CDS | 55.0% | |
AGTGCGTGCTGAACAGGAAG+AGG | + | chr6.2:22791437-22791456 | MS.gene98756:CDS | 55.0% | |
ATACCACGACCCGGAATGAG+AGG | - | chr6.2:22793714-22793733 | None:intergenic | 55.0% | |
CAACTTCACGAGGCATGCAC+TGG | + | chr6.2:22794330-22794349 | MS.gene98756:intron | 55.0% | |
CCAGGCCTGCTTTCCAATCA+TGG | - | chr6.2:22794432-22794451 | None:intergenic | 55.0% | |
CCATGATTGGAAAGCAGGCC+TGG | + | chr6.2:22794429-22794448 | MS.gene98756:intron | 55.0% | |
CTGAAACCACGGATCAGCCA+AGG | - | chr6.2:22792301-22792320 | None:intergenic | 55.0% | |
CTTGGCTGATCCGTGGTTTC+AGG | + | chr6.2:22792299-22792318 | MS.gene98756:intron | 55.0% | |
GAGAGACGCGGAGTCATTAC+GGG | + | chr6.2:22793810-22793829 | MS.gene98756:intron | 55.0% | |
GGCAGCGAAATTCACAAGGC+AGG | + | chr6.2:22793225-22793244 | MS.gene98756:intron | 55.0% | |
GGGGTTAAAACCATCCGGTC+CGG | - | chr6.2:22793175-22793194 | None:intergenic | 55.0% | |
GGGTTAAAACCATCCGGTCC+GGG | - | chr6.2:22793174-22793193 | None:intergenic | 55.0% | |
GGTGCACAAAGGCAGATAGG+TGG | + | chr6.2:22791177-22791196 | MS.gene98756:CDS | 55.0% | |
GGTTAAAACCATCCGGTCCG+GGG | - | chr6.2:22793173-22793192 | None:intergenic | 55.0% | |
GTAGGTCAGAGAGAGCTCCT+TGG | + | chr6.2:22792281-22792300 | MS.gene98756:intron | 55.0% | |
GTTCTCCCGTTCCTGCTAGT+TGG | - | chr6.2:22791410-22791429 | None:intergenic | 55.0% | |
TCAGAGTGGGAACTGTGCTC+GGG | - | chr6.2:22791877-22791896 | None:intergenic | 55.0% | |
! | CAGGTTGGACCTCTCATTCC+GGG | + | chr6.2:22793702-22793721 | MS.gene98756:intron | 55.0% |
! | GAGTTTTACACACGGGACCC+TGG | + | chr6.2:22790659-22790678 | MS.gene98756:CDS | 55.0% |
! | GTTGGGTTGTAGGAGGCGTA+TGG | + | chr6.2:22789558-22789577 | MS.gene98756:CDS | 55.0% |
!! | AGGTGCTGATCCAGTAACCG+TGG | + | chr6.2:22790957-22790976 | MS.gene98756:CDS | 55.0% |
!! | CGAAGCCGGGTTGATGATTC+AGG | + | chr6.2:22791663-22791682 | MS.gene98756:CDS | 55.0% |
!! | GGGAGAGAAGGCGTTACAGA+AGG | + | chr6.2:22789954-22789973 | MS.gene98756:CDS | 55.0% |
!! | TCGCAGTCCGCTTTTGTTCC+AGG | + | chr6.2:22793441-22793460 | MS.gene98756:intron | 55.0% |
!!! | GGACCGGATGGTTTTAACCC+CGG | + | chr6.2:22793174-22793193 | MS.gene98756:intron | 55.0% |
AGAGCTCCTTGGCTGATCCG+TGG | + | chr6.2:22792292-22792311 | MS.gene98756:intron | 60.0% | |
AGCAAGGGAGGAGGGAGAGA+AGG | + | chr6.2:22789942-22789961 | MS.gene98756:CDS | 60.0% | |
AGCAGACAAATGCCCCGGAC+CGG | + | chr6.2:22793158-22793177 | MS.gene98756:intron | 60.0% | |
CCTTGCCGAATACCACGACC+CGG | - | chr6.2:22793723-22793742 | None:intergenic | 60.0% | |
GCGCCGAAGACCTGACTGAT+TGG | + | chr6.2:22792671-22792690 | MS.gene98756:intron | 60.0% | |
GTATGGAACTGTCGGGGCCT+GGG | + | chr6.2:22791848-22791867 | MS.gene98756:intron | 60.0% | |
TGTATGGAACTGTCGGGGCC+TGG | + | chr6.2:22791847-22791866 | MS.gene98756:intron | 60.0% | |
! | AGGCAAGCAGTGTTGGACGC+GGG | + | chr6.2:22792319-22792338 | MS.gene98756:intron | 60.0% |
! | CAGGCAAGCAGTGTTGGACG+CGG | + | chr6.2:22792318-22792337 | MS.gene98756:intron | 60.0% |
! | GGGTTGTAGGAGGCGTATGG+TGG | + | chr6.2:22789561-22789580 | MS.gene98756:CDS | 60.0% |
!! | CTCATTTTCCTTGGCGGGCC+TGG | - | chr6.2:22791821-22791840 | None:intergenic | 60.0% |
CCGGGTCGTGGTATTCGGCA+AGG | + | chr6.2:22793720-22793739 | MS.gene98756:intron | 65.0% | |
GAAGTCGCTGCTGCTGCACC+AGG | + | chr6.2:22791372-22791391 | MS.gene98756:CDS | 65.0% | |
GACAAATGCCCCGGACCGGA+TGG | + | chr6.2:22793162-22793181 | MS.gene98756:intron | 65.0% | |
GCAGCAGCGACTTCCACGAC+TGG | - | chr6.2:22791366-22791385 | None:intergenic | 65.0% | |
GGACCTCTCATTCCGGGTCG+TGG | + | chr6.2:22793708-22793727 | MS.gene98756:intron | 65.0% | |
! | AATGGCGGAGCCTGGTCACC+AGG | + | chr6.2:22791800-22791819 | MS.gene98756:intron | 65.0% |
GAACTGTGCTCGGGCTGCCC+AGG | - | chr6.2:22791868-22791887 | None:intergenic | 70.0% | |
CCTGGTCACCAGGCCCGCCA+AGG | + | chr6.2:22791810-22791829 | MS.gene98756:intron | 75.0% | |
! | CCTTGGCGGGCCTGGTGACC+AGG | - | chr6.2:22791813-22791832 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 22789389 | 22794759 | 22789389 | ID=MS.gene98756 |
chr6.2 | mRNA | 22789389 | 22794759 | 22789389 | ID=MS.gene98756.t1;Parent=MS.gene98756 |
chr6.2 | exon | 22789389 | 22790112 | 22789389 | ID=MS.gene98756.t1.exon1;Parent=MS.gene98756.t1 |
chr6.2 | CDS | 22789389 | 22790112 | 22789389 | ID=cds.MS.gene98756.t1;Parent=MS.gene98756.t1 |
chr6.2 | exon | 22790263 | 22791732 | 22790263 | ID=MS.gene98756.t1.exon2;Parent=MS.gene98756.t1 |
chr6.2 | CDS | 22790263 | 22791732 | 22790263 | ID=cds.MS.gene98756.t1;Parent=MS.gene98756.t1 |
chr6.2 | exon | 22792473 | 22792646 | 22792473 | ID=MS.gene98756.t1.exon3;Parent=MS.gene98756.t1 |
chr6.2 | CDS | 22792473 | 22792646 | 22792473 | ID=cds.MS.gene98756.t1;Parent=MS.gene98756.t1 |
chr6.2 | exon | 22794737 | 22794759 | 22794737 | ID=MS.gene98756.t1.exon4;Parent=MS.gene98756.t1 |
chr6.2 | CDS | 22794737 | 22794759 | 22794737 | ID=cds.MS.gene98756.t1;Parent=MS.gene98756.t1 |
Gene Sequence |
Protein sequence |