Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067340.t1 | GAU41105.1 | 55.7 | 314 | 130 | 6 | 1 | 312 | 1 | 307 | 4.10E-92 | 348.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067340.t1 | A0A2Z6NYN8 | 55.7 | 314 | 130 | 6 | 1 | 312 | 1 | 307 | 3.0e-92 | 348.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067340.t1 | MTR_0010s0370 | 49.198 | 187 | 90 | 3 | 1 | 185 | 4 | 187 | 5.78e-55 | 177 |
MS.gene067340.t1 | MTR_0010s0350 | 49.198 | 187 | 90 | 3 | 1 | 185 | 4 | 187 | 5.78e-55 | 177 |
MS.gene067340.t1 | MTR_1g036720 | 41.284 | 109 | 62 | 1 | 1 | 109 | 4 | 110 | 1.86e-24 | 95.9 |
MS.gene067340.t1 | MTR_7g089990 | 43.697 | 119 | 64 | 3 | 101 | 216 | 84 | 202 | 2.00e-21 | 91.3 |
MS.gene067340.t1 | MTR_6g033215 | 25.381 | 197 | 142 | 3 | 2 | 197 | 102 | 294 | 4.07e-20 | 89.0 |
MS.gene067340.t1 | MTR_3g053920 | 30.909 | 165 | 95 | 3 | 6 | 170 | 11 | 156 | 6.64e-19 | 85.5 |
MS.gene067340.t1 | MTR_2g061500 | 32.800 | 125 | 79 | 2 | 3 | 124 | 5 | 127 | 1.06e-17 | 79.0 |
MS.gene067340.t1 | MTR_1g036710 | 37.879 | 132 | 46 | 2 | 131 | 261 | 1 | 97 | 2.33e-15 | 75.5 |
MS.gene067340.t1 | MTR_4g103530 | 37.805 | 82 | 50 | 1 | 72 | 152 | 21 | 102 | 3.83e-13 | 67.4 |
MS.gene067340.t1 | MTR_3g024240 | 33.884 | 121 | 77 | 1 | 81 | 198 | 55 | 175 | 2.27e-12 | 65.1 |
MS.gene067340.t1 | MTR_7g106180 | 24.138 | 145 | 103 | 2 | 33 | 174 | 26 | 166 | 1.01e-11 | 64.3 |
MS.gene067340.t1 | MTR_7g011710 | 30.682 | 88 | 61 | 0 | 52 | 139 | 1 | 88 | 6.65e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067340.t1 | AT3G31430 | 25.943 | 212 | 146 | 5 | 11 | 219 | 112 | 315 | 3.43e-15 | 75.9 |
Find 78 sgRNAs with CRISPR-Local
Find 91 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAGTAGTATTTAATAATTT+AGG | 0.171001 | 2.3:-36796417 | MS.gene067340:CDS |
CCACTACCATTTCTCTTCAC+TGG | 0.287306 | 2.3:+36796573 | None:intergenic |
AAAGCAGGTAATGTTATATC+TGG | 0.300100 | 2.3:-36796486 | MS.gene067340:CDS |
AAGTAGTATTTAATAATTTA+GGG | 0.305381 | 2.3:-36796416 | MS.gene067340:CDS |
CACTACCATTTCTCTTCACT+GGG | 0.314905 | 2.3:+36796574 | None:intergenic |
TGTTTGTCAGATGTCTATTA+AGG | 0.315865 | 2.3:-36797105 | MS.gene067340:CDS |
CTTCGGAGTTAAATTTGATT+TGG | 0.317186 | 2.3:+36796337 | None:intergenic |
CATATAAGAAGAAAGAAAAT+TGG | 0.325898 | 2.3:+36796815 | None:intergenic |
CTCTCAATCACATACCCTTC+TGG | 0.331587 | 2.3:-36796941 | MS.gene067340:CDS |
CAAACAGATTGCATGAATTC+TGG | 0.334109 | 2.3:+36797122 | None:intergenic |
TAGCTTGCGGCTCATCAAAT+TGG | 0.346135 | 2.3:+36797234 | None:intergenic |
CAGATGATGGCACACGTCTT+TGG | 0.355181 | 2.3:-36796614 | MS.gene067340:CDS |
AACAATTGGGTAATTTCGTT+GGG | 0.359817 | 2.3:-36796869 | MS.gene067340:CDS |
CAAAGACGTGTGCCATCATC+TGG | 0.384577 | 2.3:+36796615 | None:intergenic |
GTGATTGAGAGGAACAGATT+TGG | 0.387623 | 2.3:+36796953 | None:intergenic |
AATTACTGCAGGTAAACAAT+TGG | 0.388738 | 2.3:-36796883 | MS.gene067340:CDS |
CGTTTCAAATATGAGAAACT+TGG | 0.392185 | 2.3:-36796711 | MS.gene067340:CDS |
TGATTGAGAGGAACAGATTT+GGG | 0.401792 | 2.3:+36796954 | None:intergenic |
GAGTTAAATTTGATTTGGTT+GGG | 0.405932 | 2.3:+36796342 | None:intergenic |
GTTGCAAGAGGATGGTAATC+TGG | 0.412343 | 2.3:-36796532 | MS.gene067340:CDS |
TTCATCTTCTTCACCTGTGA+TGG | 0.412881 | 2.3:+36797265 | None:intergenic |
GGAGTTAAATTTGATTTGGT+TGG | 0.416136 | 2.3:+36796341 | None:intergenic |
AACTGTTAGTAAACAACATT+CGG | 0.424771 | 2.3:-36796445 | MS.gene067340:CDS |
TGCTGCAAAATTCATCTTTG+TGG | 0.431102 | 2.3:+36796658 | None:intergenic |
GACGGGCATCTTCTGGTACT+AGG | 0.431894 | 2.3:-36796999 | MS.gene067340:CDS |
TATGTGTATTCGTGTTCTGC+TGG | 0.438725 | 2.3:-36796796 | MS.gene067340:CDS |
AAACAATTGGGTAATTTCGT+TGG | 0.442025 | 2.3:-36796870 | MS.gene067340:CDS |
ACGGGCATCTTCTGGTACTA+GGG | 0.442618 | 2.3:-36796998 | MS.gene067340:CDS |
GCTACCTCTGAGTCCCTTGA+AGG | 0.448883 | 2.3:-36797215 | MS.gene067340:CDS |
AAGAGGATGGTAATCTGGTT+TGG | 0.453619 | 2.3:-36796527 | MS.gene067340:CDS |
AATTCAGTCTCGTTTACCTT+CGG | 0.456176 | 2.3:+36796320 | None:intergenic |
CTGGAGCATCATTTGCATAC+AGG | 0.465451 | 2.3:+36796634 | None:intergenic |
CAAGTTTCTCATATTTGAAA+CGG | 0.471452 | 2.3:+36796712 | None:intergenic |
TCATCGCACAGAATCGAATT+CGG | 0.472214 | 2.3:+36797156 | None:intergenic |
AGAAATGGTAGTGGAAGCTC+TGG | 0.472377 | 2.3:-36796564 | MS.gene067340:CDS |
TAATTGACATACAGCTGATT+GGG | 0.476607 | 2.3:+36796901 | None:intergenic |
AATTCGATTCTGTGCGATGA+AGG | 0.484009 | 2.3:-36797153 | MS.gene067340:CDS |
ATTACTGCAGGTAAACAATT+GGG | 0.485820 | 2.3:-36796882 | MS.gene067340:CDS |
GTAATTGACATACAGCTGAT+TGG | 0.490296 | 2.3:+36796900 | None:intergenic |
CGTGCCCCAGTGAAGAGAAA+TGG | 0.491354 | 2.3:-36796579 | MS.gene067340:CDS |
CTAAAACGAAGGAACCTTCA+AGG | 0.493245 | 2.3:+36797201 | None:intergenic |
TTGGGAGGGAATAAAGTAGC+AGG | 0.515675 | 2.3:+36796360 | None:intergenic |
TAAATTTGATTTGGTTGGGA+GGG | 0.523322 | 2.3:+36796346 | None:intergenic |
TACAGCTGATTGGGACATCA+TGG | 0.526410 | 2.3:+36796910 | None:intergenic |
TTAAATTTGATTTGGTTGGG+AGG | 0.537465 | 2.3:+36796345 | None:intergenic |
ATGGAGCACCTTTCCATCAC+AGG | 0.538696 | 2.3:-36797278 | MS.gene067340:CDS |
AGCTGTATGTCAATTACTGC+AGG | 0.540404 | 2.3:-36796894 | MS.gene067340:CDS |
CTTCTTCACCTGTGATGGAA+AGG | 0.547283 | 2.3:+36797270 | None:intergenic |
GTTTCAAATATGAGAAACTT+GGG | 0.548613 | 2.3:-36796710 | MS.gene067340:CDS |
ATCATGGACTTGCAGCCAGA+AGG | 0.554532 | 2.3:+36796926 | None:intergenic |
GCTGGATGTTCGAAAACCAC+TGG | 0.562417 | 2.3:-36796778 | MS.gene067340:CDS |
TAAAACGAAGGAACCTTCAA+GGG | 0.562707 | 2.3:+36797202 | None:intergenic |
TCATGGACTTGCAGCCAGAA+GGG | 0.563350 | 2.3:+36796927 | None:intergenic |
GTTCTTTAACTCTCGCAACA+TGG | 0.563622 | 2.3:-36797054 | MS.gene067340:CDS |
CAAATCAAATTTAACTCCGA+AGG | 0.568103 | 2.3:-36796336 | MS.gene067340:CDS |
TCAAAGTGGTTGCAAGAGGA+TGG | 0.569194 | 2.3:-36796540 | MS.gene067340:CDS |
TAATTTCGTTGGGGAATACA+CGG | 0.572046 | 2.3:-36796859 | MS.gene067340:CDS |
GCAAATGATGCTCCAGATGA+TGG | 0.576885 | 2.3:-36796627 | MS.gene067340:CDS |
TTGTCAGATGTCTATTAAGG+AGG | 0.578781 | 2.3:-36797102 | MS.gene067340:CDS |
GGCGCATATCTCCATGGCAG+AGG | 0.585031 | 2.3:-36796394 | MS.gene067340:CDS |
CTAACAGTTGTGATTCTCTG+AGG | 0.585141 | 2.3:+36796459 | None:intergenic |
ACAATTGGGTAATTTCGTTG+GGG | 0.589723 | 2.3:-36796868 | MS.gene067340:CDS |
CAGAAGGGTATGTGATTGAG+AGG | 0.592411 | 2.3:+36796942 | None:intergenic |
ATTTGTGAATGCCTCTGCCA+TGG | 0.593335 | 2.3:+36796383 | None:intergenic |
AAAACATCCAACTAAAACGA+AGG | 0.594055 | 2.3:+36797190 | None:intergenic |
ATGGAGCGAGTACTCAAGAA+AGG | 0.596060 | 2.3:-36797035 | MS.gene067340:CDS |
CCAGTGAAGAGAAATGGTAG+TGG | 0.603674 | 2.3:-36796573 | MS.gene067340:CDS |
AGTAGTATTTAATAATTTAG+GGG | 0.607832 | 2.3:-36796415 | MS.gene067340:CDS |
GAGTACTCAAGAAAGGTCCT+TGG | 0.616745 | 2.3:-36797028 | MS.gene067340:CDS |
TGGATCAAAGTGGTTGCAAG+AGG | 0.620891 | 2.3:-36796544 | MS.gene067340:CDS |
ACAGAATCGAATTCGGCGGT+CGG | 0.621924 | 2.3:+36797163 | None:intergenic |
TTTAGGGGCGCATATCTCCA+TGG | 0.624881 | 2.3:-36796400 | MS.gene067340:CDS |
GGAACCTTCAAGGGACTCAG+AGG | 0.651216 | 2.3:+36797211 | None:intergenic |
ACTACCATTTCTCTTCACTG+GGG | 0.689270 | 2.3:+36796575 | None:intergenic |
AGGGACTCAGAGGTAGCTTG+CGG | 0.695951 | 2.3:+36797221 | None:intergenic |
GTGGAAGCTCTGGATCAAAG+TGG | 0.696405 | 2.3:-36796554 | MS.gene067340:CDS |
AGATGCCCGTCAAAATACCA+AGG | 0.702027 | 2.3:+36797011 | None:intergenic |
TCGCACAGAATCGAATTCGG+CGG | 0.707241 | 2.3:+36797159 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGTAGTATTTAATAATTTA+GGG | - | chr2.3:36797185-36797204 | MS.gene067340:CDS | 10.0% |
!! | AGTAGTATTTAATAATTTAG+GGG | - | chr2.3:36797186-36797205 | MS.gene067340:CDS | 15.0% |
!! | CAAGTAGTATTTAATAATTT+AGG | - | chr2.3:36797184-36797203 | MS.gene067340:CDS | 15.0% |
!!! | TAGTCTTAATCTTTTTAAAT+CGG | + | chr2.3:36796850-36796869 | None:intergenic | 15.0% |
!! | CATATAAGAAGAAAGAAAAT+TGG | + | chr2.3:36796789-36796808 | None:intergenic | 20.0% |
!!! | AGTCTTAATCTTTTTAAATC+GGG | + | chr2.3:36796849-36796868 | None:intergenic | 20.0% |
! | AAAAAGATTAAGACTAAGAC+TGG | - | chr2.3:36796854-36796873 | MS.gene067340:CDS | 25.0% |
! | AACTGTTAGTAAACAACATT+CGG | - | chr2.3:36797156-36797175 | MS.gene067340:CDS | 25.0% |
! | CAAGTTTCTCATATTTGAAA+CGG | + | chr2.3:36796892-36796911 | None:intergenic | 25.0% |
! | GTTTCAAATATGAGAAACTT+GGG | - | chr2.3:36796891-36796910 | MS.gene067340:CDS | 25.0% |
!!! | GAGTTAAATTTGATTTGGTT+GGG | + | chr2.3:36797262-36797281 | None:intergenic | 25.0% |
AAAACATCCAACTAAAACGA+AGG | + | chr2.3:36796414-36796433 | None:intergenic | 30.0% | |
AAACAATTGGGTAATTTCGT+TGG | - | chr2.3:36796731-36796750 | MS.gene067340:CDS | 30.0% | |
AAAGCAGGTAATGTTATATC+TGG | - | chr2.3:36797115-36797134 | MS.gene067340:CDS | 30.0% | |
AACAATTGGGTAATTTCGTT+GGG | - | chr2.3:36796732-36796751 | MS.gene067340:CDS | 30.0% | |
AATTACTGCAGGTAAACAAT+TGG | - | chr2.3:36796718-36796737 | MS.gene067340:CDS | 30.0% | |
ATTACTGCAGGTAAACAATT+GGG | - | chr2.3:36796719-36796738 | MS.gene067340:CDS | 30.0% | |
CAAACCACAAAAATAGCAAA+AGG | + | chr2.3:36796918-36796937 | None:intergenic | 30.0% | |
CAAATCAAATTTAACTCCGA+AGG | - | chr2.3:36797265-36797284 | MS.gene067340:CDS | 30.0% | |
CGTTTCAAATATGAGAAACT+TGG | - | chr2.3:36796890-36796909 | MS.gene067340:CDS | 30.0% | |
CTTCGGAGTTAAATTTGATT+TGG | + | chr2.3:36797267-36797286 | None:intergenic | 30.0% | |
TAATTGACATACAGCTGATT+GGG | + | chr2.3:36796703-36796722 | None:intergenic | 30.0% | |
TGTTTGTCAGATGTCTATTA+AGG | - | chr2.3:36796496-36796515 | MS.gene067340:CDS | 30.0% | |
!! | GGAGTTAAATTTGATTTGGT+TGG | + | chr2.3:36797263-36797282 | None:intergenic | 30.0% |
!! | TAAATTTGATTTGGTTGGGA+GGG | + | chr2.3:36797258-36797277 | None:intergenic | 30.0% |
!! | TTAAATTTGATTTGGTTGGG+AGG | + | chr2.3:36797259-36797278 | None:intergenic | 30.0% |
ACAATTGGGTAATTTCGTTG+GGG | - | chr2.3:36796733-36796752 | MS.gene067340:CDS | 35.0% | |
CAAACAGATTGCATGAATTC+TGG | + | chr2.3:36796482-36796501 | None:intergenic | 35.0% | |
GTAATTGACATACAGCTGAT+TGG | + | chr2.3:36796704-36796723 | None:intergenic | 35.0% | |
TAAAACGAAGGAACCTTCAA+GGG | + | chr2.3:36796402-36796421 | None:intergenic | 35.0% | |
TAATTTCGTTGGGGAATACA+CGG | - | chr2.3:36796742-36796761 | MS.gene067340:CDS | 35.0% | |
TGATTGAGAGGAACAGATTT+GGG | + | chr2.3:36796650-36796669 | None:intergenic | 35.0% | |
TGCTGCAAAATTCATCTTTG+TGG | + | chr2.3:36796946-36796965 | None:intergenic | 35.0% | |
TTGTCAGATGTCTATTAAGG+AGG | - | chr2.3:36796499-36796518 | MS.gene067340:CDS | 35.0% | |
!! | AAAGGTCCTTGGTATTTTGA+CGG | - | chr2.3:36796584-36796603 | MS.gene067340:CDS | 35.0% |
!!! | ACATTACCTGCTTTTTGTGA+TGG | + | chr2.3:36797109-36797128 | None:intergenic | 35.0% |
!!! | TGCTATTTTTGTGGTTTGCT+TGG | - | chr2.3:36796920-36796939 | MS.gene067340:CDS | 35.0% |
AAGAGGATGGTAATCTGGTT+TGG | - | chr2.3:36797074-36797093 | MS.gene067340:CDS | 40.0% | |
AATTCGATTCTGTGCGATGA+AGG | - | chr2.3:36796448-36796467 | MS.gene067340:CDS | 40.0% | |
ACTACCATTTCTCTTCACTG+GGG | + | chr2.3:36797029-36797048 | None:intergenic | 40.0% | |
AGCTGTATGTCAATTACTGC+AGG | - | chr2.3:36796707-36796726 | MS.gene067340:CDS | 40.0% | |
CACTACCATTTCTCTTCACT+GGG | + | chr2.3:36797030-36797049 | None:intergenic | 40.0% | |
CTAAAACGAAGGAACCTTCA+AGG | + | chr2.3:36796403-36796422 | None:intergenic | 40.0% | |
CTAACAGTTGTGATTCTCTG+AGG | + | chr2.3:36797145-36797164 | None:intergenic | 40.0% | |
GTGATTGAGAGGAACAGATT+TGG | + | chr2.3:36796651-36796670 | None:intergenic | 40.0% | |
GTTCTTTAACTCTCGCAACA+TGG | - | chr2.3:36796547-36796566 | MS.gene067340:CDS | 40.0% | |
TATGTGTATTCGTGTTCTGC+TGG | - | chr2.3:36796805-36796824 | MS.gene067340:CDS | 40.0% | |
TCATCGCACAGAATCGAATT+CGG | + | chr2.3:36796448-36796467 | None:intergenic | 40.0% | |
TTCATCTTCTTCACCTGTGA+TGG | + | chr2.3:36796339-36796358 | None:intergenic | 40.0% | |
! | ATCTTTTTAAATCGGGCCAG+TGG | + | chr2.3:36796842-36796861 | None:intergenic | 40.0% |
!! | GAAGGTTCCTTCGTTTTAGT+TGG | - | chr2.3:36796404-36796423 | MS.gene067340:CDS | 40.0% |
!!! | AAGGTCCTTGGTATTTTGAC+GGG | - | chr2.3:36796585-36796604 | MS.gene067340:CDS | 40.0% |
!!! | GGGTCCTTTTGCTATTTTTG+TGG | - | chr2.3:36796911-36796930 | MS.gene067340:CDS | 40.0% |
AGATGCCCGTCAAAATACCA+AGG | + | chr2.3:36796593-36796612 | None:intergenic | 45.0% | |
ATGGAGCGAGTACTCAAGAA+AGG | - | chr2.3:36796566-36796585 | MS.gene067340:CDS | 45.0% | |
ATTTGTGAATGCCTCTGCCA+TGG | + | chr2.3:36797221-36797240 | None:intergenic | 45.0% | |
CCACTACCATTTCTCTTCAC+TGG | + | chr2.3:36797031-36797050 | None:intergenic | 45.0% | |
CCAGTGAAGAGAAATGGTAG+TGG | - | chr2.3:36797028-36797047 | MS.gene067340:CDS | 45.0% | |
CTCTCAATCACATACCCTTC+TGG | - | chr2.3:36796660-36796679 | MS.gene067340:CDS | 45.0% | |
GAGTACTCAAGAAAGGTCCT+TGG | - | chr2.3:36796573-36796592 | MS.gene067340:CDS | 45.0% | |
GCAAATGATGCTCCAGATGA+TGG | - | chr2.3:36796974-36796993 | MS.gene067340:CDS | 45.0% | |
GTTGCAAGAGGATGGTAATC+TGG | - | chr2.3:36797069-36797088 | MS.gene067340:CDS | 45.0% | |
TACAGCTGATTGGGACATCA+TGG | + | chr2.3:36796694-36796713 | None:intergenic | 45.0% | |
TCAAAGTGGTTGCAAGAGGA+TGG | - | chr2.3:36797061-36797080 | MS.gene067340:CDS | 45.0% | |
TGGATCAAAGTGGTTGCAAG+AGG | - | chr2.3:36797057-36797076 | MS.gene067340:CDS | 45.0% | |
TTGGGAGGGAATAAAGTAGC+AGG | + | chr2.3:36797244-36797263 | None:intergenic | 45.0% | |
! | CAGAAGGGTATGTGATTGAG+AGG | + | chr2.3:36796662-36796681 | None:intergenic | 45.0% |
! | CTGGAGCATCATTTGCATAC+AGG | + | chr2.3:36796970-36796989 | None:intergenic | 45.0% |
! | CTTCTTCACCTGTGATGGAA+AGG | + | chr2.3:36796334-36796353 | None:intergenic | 45.0% |
! | GTACTAGGGATTTTGCAGCA+AGG | - | chr2.3:36796617-36796636 | MS.gene067340:CDS | 45.0% |
! | TAGCTTGCGGCTCATCAAAT+TGG | + | chr2.3:36796370-36796389 | None:intergenic | 45.0% |
!! | AGAAATGGTAGTGGAAGCTC+TGG | - | chr2.3:36797037-36797056 | MS.gene067340:CDS | 45.0% |
!!! | GTATTTTGACGGGCATCTTC+TGG | - | chr2.3:36796595-36796614 | MS.gene067340:CDS | 45.0% |
ACAGAATCGAATTCGGCGGT+CGG | + | chr2.3:36796441-36796460 | None:intergenic | 50.0% | |
ACGGGCATCTTCTGGTACTA+GGG | - | chr2.3:36796603-36796622 | MS.gene067340:CDS | 50.0% | |
ATCATGGACTTGCAGCCAGA+AGG | + | chr2.3:36796678-36796697 | None:intergenic | 50.0% | |
CAAAGACGTGTGCCATCATC+TGG | + | chr2.3:36796989-36797008 | None:intergenic | 50.0% | |
GCTGCACCATCACAAAAAGC+AGG | - | chr2.3:36797100-36797119 | MS.gene067340:CDS | 50.0% | |
GCTGGATGTTCGAAAACCAC+TGG | - | chr2.3:36796823-36796842 | MS.gene067340:CDS | 50.0% | |
TCATGGACTTGCAGCCAGAA+GGG | + | chr2.3:36796677-36796696 | None:intergenic | 50.0% | |
TCGCACAGAATCGAATTCGG+CGG | + | chr2.3:36796445-36796464 | None:intergenic | 50.0% | |
! | ATGGAGCACCTTTCCATCAC+AGG | - | chr2.3:36796323-36796342 | MS.gene067340:CDS | 50.0% |
! | CAGATGATGGCACACGTCTT+TGG | - | chr2.3:36796987-36797006 | MS.gene067340:CDS | 50.0% |
! | TTTAGGGGCGCATATCTCCA+TGG | - | chr2.3:36797201-36797220 | MS.gene067340:CDS | 50.0% |
!! | GTGGAAGCTCTGGATCAAAG+TGG | - | chr2.3:36797047-36797066 | MS.gene067340:CDS | 50.0% |
AGGGACTCAGAGGTAGCTTG+CGG | + | chr2.3:36796383-36796402 | None:intergenic | 55.0% | |
CGTGCCCCAGTGAAGAGAAA+TGG | - | chr2.3:36797022-36797041 | MS.gene067340:CDS | 55.0% | |
GACGGGCATCTTCTGGTACT+AGG | - | chr2.3:36796602-36796621 | MS.gene067340:CDS | 55.0% | |
GCTACCTCTGAGTCCCTTGA+AGG | - | chr2.3:36796386-36796405 | MS.gene067340:CDS | 55.0% | |
GGAACCTTCAAGGGACTCAG+AGG | + | chr2.3:36796393-36796412 | None:intergenic | 55.0% | |
GGCGCATATCTCCATGGCAG+AGG | - | chr2.3:36797207-36797226 | MS.gene067340:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 36796323 | 36797300 | 36796323 | ID=MS.gene067340 |
chr2.3 | mRNA | 36796323 | 36797300 | 36796323 | ID=MS.gene067340.t1;Parent=MS.gene067340 |
chr2.3 | exon | 36796323 | 36797300 | 36796323 | ID=MS.gene067340.t1.exon1;Parent=MS.gene067340.t1 |
chr2.3 | CDS | 36796323 | 36797300 | 36796323 | ID=cds.MS.gene067340.t1;Parent=MS.gene067340.t1 |
Gene Sequence |
Protein sequence |