AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene23521

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23521.t1 MTR_6g053230 75.451 554 53 3 113 666 1 471 0.0 741
MS.gene23521.t1 MTR_6g033215 36.697 218 135 2 113 330 80 294 2.77e-46 166
MS.gene23521.t1 MTR_3g024240 46.667 120 62 1 213 330 55 174 2.55e-31 121
MS.gene23521.t1 MTR_0010s0370 37.908 153 95 0 155 307 24 176 3.68e-30 117
MS.gene23521.t1 MTR_0010s0350 37.908 153 95 0 155 307 24 176 3.68e-30 117
MS.gene23521.t1 MTR_3g053920 26.404 178 106 2 130 307 11 163 3.40e-23 100
MS.gene23521.t1 MTR_2g061500 35.577 104 67 0 152 255 23 126 6.68e-21 89.7
MS.gene23521.t1 MTR_1g036720 40.000 70 42 0 163 232 32 101 2.74e-16 75.5
MS.gene23521.t1 MTR_8g468010 48.387 62 32 0 246 307 1 62 1.66e-14 71.6
MS.gene23521.t1 MTR_4g103530 30.534 131 78 3 186 316 3 120 2.39e-14 72.4
MS.gene23521.t1 MTR_1g032270 40.278 72 43 0 229 300 1 72 2.94e-12 65.5
MS.gene23521.t1 MTR_7g011710 32.051 78 53 0 184 261 1 78 6.85e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23521.t1 AT2G01050 24.607 191 136 4 159 348 75 258 2.46e-14 76.6
MS.gene23521.t1 AT5G25200 22.449 147 112 1 206 352 80 224 3.33e-13 72.4
MS.gene23521.t1 AT3G31430 22.222 216 159 3 133 346 103 311 4.12e-13 71.6
MS.gene23521.t1 AT2G02103 22.449 147 112 1 206 352 80 224 7.60e-13 71.6
MS.gene23521.t1 AT5G18636 22.222 144 110 1 206 349 80 221 1.42e-12 70.5
MS.gene23521.t1 AT2G17920 20.513 195 153 1 162 356 36 228 3.48e-12 68.6
MS.gene23521.t1 AT3G57587 22.449 147 112 1 206 352 80 224 4.97e-12 68.6
MS.gene23521.t1 AT2G41590 21.769 147 113 1 206 352 80 224 3.83e-11 65.9

Find 190 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATGAAGTCTCCTTGAAAT+TGG 0.133921 7.3:+14920737 None:intergenic
AGAAAATGTGAGAGCATTAA+AGG 0.188980 7.3:+14920696 None:intergenic
TATCCCATTGGTGGTAAAAT+TGG 0.223221 7.3:+14920247 None:intergenic
CTTTCAAAACTTTGGCGTTC+TGG 0.224647 7.3:-14920315 MS.gene23521:CDS
ACAGATATGACGTTGAAATT+TGG 0.229855 7.3:-14920764 MS.gene23521:CDS
AAAATCCCTCCAAATCTTCT+TGG 0.246895 7.3:+14920669 None:intergenic
TATGATATCAATAATTATTA+TGG 0.263716 7.3:-14920024 MS.gene23521:CDS
GTTGGGATTGCTCAGTCTTA+TGG 0.271802 7.3:-14920615 MS.gene23521:CDS
TTTGTATTGTTCAGATTAAA+AGG 0.277980 7.3:+14919484 None:intergenic
AGCTTTCAAGGTGGGAAATT+AGG 0.278854 7.3:-14920831 MS.gene23521:CDS
GGATGGCCCACGTGATTTAC+AGG 0.285518 7.3:-14919119 MS.gene23521:CDS
TTGCTTGAGCTGTGCGTTGT+TGG 0.290068 7.3:-14920387 MS.gene23521:CDS
CAAATAACTCTCATGCTAAC+AGG 0.291003 7.3:-14919352 MS.gene23521:CDS
TTTCTGAAACCAAGAAGATT+TGG 0.291807 7.3:-14920678 MS.gene23521:CDS
TGTGGATGGTGTGCAACTTT+GGG 0.299218 7.3:-14919803 MS.gene23521:CDS
AAAGTCTCTCCTGCATGAAT+TGG 0.311019 7.3:+14920334 None:intergenic
TTGCTATTGTTGTGGTATCT+TGG 0.318853 7.3:-14919869 MS.gene23521:CDS
ATTATCTGCCTGAGTTGTAC+TGG 0.319258 7.3:+14919012 None:intergenic
TCCTAGATGAGGTTGAAATA+TGG 0.321549 7.3:-14920131 MS.gene23521:CDS
AGGTTAGTCACAAGTGTTAT+TGG 0.332583 7.3:-14919538 MS.gene23521:CDS
CAGGTATTTAATATCCCCTT+TGG 0.335280 7.3:-14920105 MS.gene23521:CDS
ACAAGTGTTATTGGTCCTAA+TGG 0.336479 7.3:-14919529 MS.gene23521:CDS
CAAGTGTTATTGGTCCTAAT+GGG 0.337245 7.3:-14919528 MS.gene23521:CDS
TTGTGGATGGTGTGCAACTT+TGG 0.339267 7.3:-14919804 MS.gene23521:CDS
AAACCAGGTTCTAGTCTCTT+AGG 0.353365 7.3:+14919826 None:intergenic
CAACGACCTGATGCTTTATA+AGG 0.357238 7.3:-14920589 MS.gene23521:CDS
TGCTATTGTTGTGGTATCTT+GGG 0.360693 7.3:-14919868 MS.gene23521:CDS
ACTATCAGAAGGTTAGTTAA+TGG 0.366739 7.3:-14919445 MS.gene23521:CDS
TGCTTGAGCTGTGCGTTGTT+GGG 0.370896 7.3:-14920386 MS.gene23521:CDS
TCCAGCGAGCATGCCCTGTT+TGG 0.371005 7.3:-14919601 MS.gene23521:CDS
ACCATGTGTCTTGTCATTAC+CGG 0.377977 7.3:+14919163 None:intergenic
ACGTCCATGGCCCTTCTTGT+AGG 0.378660 7.3:+14920214 None:intergenic
GATGGGAGTTTGAGATTGAT+TGG 0.378911 7.3:-14919301 MS.gene23521:CDS
GAAGGGCCATGGACGTTTGA+TGG 0.379966 7.3:-14920207 MS.gene23521:CDS
GGATTATGGGAGATAGGATC+TGG 0.398688 7.3:-14920869 None:intergenic
TATTCCAACTTATCAACAAT+CGG 0.407833 7.3:+14918015 None:intergenic
CGAGTAATTGTTCTGTTGGC+GGG 0.408795 7.3:-14919765 MS.gene23521:CDS
TCCTTTCAATGTGGTGGTGA+TGG 0.410961 7.3:-14919629 MS.gene23521:CDS
GAATCTGCCAGCACCTTCTT+CGG 0.412434 7.3:-14918181 MS.gene23521:CDS
AGATTCTCAAGAACTGCATC+AGG 0.413071 7.3:+14918198 None:intergenic
TCCAAACAGGGCATGCTCGC+TGG 0.414109 7.3:+14919600 None:intergenic
GACGTTTGATGGCTTTCTGC+TGG 0.414361 7.3:-14920196 MS.gene23521:CDS
ATGGCTTTCTGCTGGTGCTT+AGG 0.416822 7.3:-14920188 MS.gene23521:CDS
TTTAATCTAAGAAGATTTGT+TGG 0.417701 7.3:-14920633 MS.gene23521:CDS
GGTTGTGGCGGCCGTAATGA+TGG 0.420072 7.3:-14919700 MS.gene23521:CDS
TGCTGGACCATTGGTGATAA+GGG 0.421410 7.3:-14919140 MS.gene23521:CDS
AATGAAGTCTCCTTGAAATT+GGG 0.423033 7.3:+14920738 None:intergenic
GCATGAGGACCTGACGTATC+TGG 0.425302 7.3:-14920076 MS.gene23521:CDS
TTGAAAGCTCTGTTTGACTT+TGG 0.426071 7.3:+14920845 None:intergenic
CATGGTGGTTGTACTTGAAC+AGG 0.427779 7.3:-14918984 MS.gene23521:CDS
CAGCAGAGCCCCATCAGTTA+TGG 0.428386 7.3:+14919249 None:intergenic
ATAATAGGATTATGGGAGAT+AGG 0.429232 7.3:-14920875 None:intergenic
CCTAGATGAGGTTGAAATAT+GGG 0.432587 7.3:-14920130 MS.gene23521:CDS
AATAATTCAACAGGAAATGA+TGG 0.435562 7.3:-14919319 MS.gene23521:CDS
GGGGTGTAACTGTGAATAAA+TGG 0.438050 7.3:-14919744 MS.gene23521:CDS
ATGACAAGACACATGGTTGC+TGG 0.442661 7.3:-14919157 MS.gene23521:CDS
AATACAGGTAATAATTCAAC+AGG 0.444496 7.3:-14919328 MS.gene23521:CDS
AGGAGAGACTTTCAAAACTT+TGG 0.446001 7.3:-14920323 MS.gene23521:CDS
AAAGTCAAACAGAGCTTTCA+AGG 0.451118 7.3:-14920843 MS.gene23521:CDS
ACCATTCCTTATAAAGCATC+AGG 0.452812 7.3:+14920583 None:intergenic
TTAATCTAAGAAGATTTGTT+GGG 0.454784 7.3:-14920632 MS.gene23521:CDS
CTCATGCTAACAGGGAATAC+AGG 0.458584 7.3:-14919343 MS.gene23521:CDS
TACCTCTTCCTCCATCATTA+CGG 0.460920 7.3:+14919689 None:intergenic
TGAACAGGAAGCAAGTGATA+TGG 0.463030 7.3:-14918969 MS.gene23521:CDS
CTTGCGCACACCACCCGCCC+TGG 0.464164 7.3:+14919196 None:intergenic
GTTCTCTTCCACCTGATCAA+TGG 0.465167 7.3:+14920281 None:intergenic
TCACCAAATGCATCCTCAGC+TGG 0.468241 7.3:-14920435 MS.gene23521:CDS
AGAGGTACTGGTAGTAGTAA+TGG 0.469577 7.3:-14919673 MS.gene23521:CDS
TTGCCCGATTGTTGATAAGT+TGG 0.471683 7.3:-14918019 MS.gene23521:CDS
ACTGATAAGTGGAGTTCCTA+TGG 0.473400 7.3:-14918045 MS.gene23521:CDS
GTAGTTTCGTCACTGATAAG+TGG 0.473839 7.3:-14918056 MS.gene23521:intron
CCGAGTAATTGTTCTGTTGG+CGG 0.476801 7.3:-14919766 MS.gene23521:CDS
GATCCAGCTGAGGATGCATT+TGG 0.477067 7.3:+14920432 None:intergenic
CCAAGGTGTTACCATTGATC+AGG 0.481589 7.3:-14920292 MS.gene23521:CDS
CTGCTGAATGAAGGAGATGC+TGG 0.482460 7.3:-14919232 MS.gene23521:CDS
TATCTGGTTGGATGTCATAT+GGG 0.482617 7.3:-14920060 MS.gene23521:CDS
GTATCTGGTTGGATGTCATA+TGG 0.483917 7.3:-14920061 MS.gene23521:CDS
CTAACCTTCTGATAGTGACT+TGG 0.486538 7.3:+14919452 None:intergenic
CCCATATTTCAACCTCATCT+AGG 0.487659 7.3:+14920130 None:intergenic
TTGCTGGACCATTGGTGATA+AGG 0.487725 7.3:-14919141 MS.gene23521:CDS
AACAGGGCATGCTCGCTGGA+AGG 0.488239 7.3:+14919604 None:intergenic
AGAGTTATTTGCTGATGTGT+TGG 0.488380 7.3:+14919364 None:intergenic
TTCTTTCCATATCCCATTGG+TGG 0.489616 7.3:+14920238 None:intergenic
CTTTCTGCTGGTGCTTAGGA+AGG 0.490101 7.3:-14920184 MS.gene23521:CDS
TCCTCATGCATAAAACCAAA+GGG 0.491411 7.3:+14920090 None:intergenic
CTGAAACCAAGAAGATTTGG+AGG 0.491482 7.3:-14920675 MS.gene23521:CDS
GGATTCTTTCCATATCCCAT+TGG 0.495245 7.3:+14920235 None:intergenic
GGTAAAGCAAAAGAAGCATC+TGG 0.500747 7.3:-14919061 MS.gene23521:CDS
GGCCGTAATGATGGAGGAAG+AGG 0.501252 7.3:-14919691 MS.gene23521:CDS
GAGTTATTTGCTGATGTGTT+GGG 0.507288 7.3:+14919365 None:intergenic
GAGTTAAAATCATATGTGGT+AGG 0.508596 7.3:-14919576 MS.gene23521:CDS
AATCCGAGTAATTGTTCTGT+TGG 0.509128 7.3:-14919769 MS.gene23521:CDS
CCTTTCAATGTGGTGGTGAT+GGG 0.511010 7.3:-14919628 MS.gene23521:CDS
AATTTGGCATCCCAATTTCA+AGG 0.513224 7.3:-14920748 MS.gene23521:CDS
CTGAATTCTCCATAACTGAT+GGG 0.514195 7.3:-14919258 MS.gene23521:CDS
GGAAGAGTTAAAATCATATG+TGG 0.521721 7.3:-14919580 MS.gene23521:CDS
AATGATGGAGGAAGAGGTAC+TGG 0.522470 7.3:-14919685 MS.gene23521:CDS
GTGCGCAAGTAAGAAGAAAC+CGG 0.524494 7.3:-14919182 MS.gene23521:CDS
GTTAAAATCATATGTGGTAG+GGG 0.525541 7.3:-14919574 MS.gene23521:CDS
ACAAACTTCTGAACCAGGGC+GGG 0.525799 7.3:-14919209 MS.gene23521:CDS
TCTGAATTCTCCATAACTGA+TGG 0.525833 7.3:-14919259 MS.gene23521:CDS
AAACTTTGGCGTTCTGGCCA+AGG 0.525958 7.3:-14920309 MS.gene23521:CDS
ACCTGATGCTTTATAAGGAA+TGG 0.526263 7.3:-14920584 MS.gene23521:CDS
ACAGGGCATGCTCGCTGGAA+GGG 0.527776 7.3:+14919605 None:intergenic
TGAGGTTGAAATATGGGCTC+AGG 0.527998 7.3:-14920124 MS.gene23521:CDS
CAGAAGGTTAGTTAATGGTA+TGG 0.529188 7.3:-14919440 MS.gene23521:CDS
ATTCCAACTTATCAACAATC+GGG 0.530661 7.3:+14918016 None:intergenic
TCATTTAAATACGAGAAACT+TGG 0.531812 7.3:-14919898 MS.gene23521:CDS
AGTTAAAATCATATGTGGTA+GGG 0.534673 7.3:-14919575 MS.gene23521:CDS
CCCATCACCACCACATTGAA+AGG 0.534754 7.3:+14919628 None:intergenic
GGTGGTAGAATGGCTGGTTG+TGG 0.540307 7.3:-14919715 MS.gene23521:CDS
GGAAGCAAGTGATATGGTGC+TGG 0.545419 7.3:-14918963 MS.gene23521:CDS
ATCCTCTGATTTGTCACAAG+AGG 0.548440 7.3:-14920412 MS.gene23521:CDS
GATGGGGCTCTGCTGAATGA+AGG 0.554620 7.3:-14919241 MS.gene23521:CDS
TAGTGATCCGAAGAAGGTGC+TGG 0.554743 7.3:+14918174 None:intergenic
ACACAAAATACACAATATGA+AGG 0.556147 7.3:-14919088 MS.gene23521:CDS
TTGCGTGGTGGTAGAATGGC+TGG 0.557858 7.3:-14919721 MS.gene23521:CDS
GTCCTCATGCATAAAACCAA+AGG 0.562425 7.3:+14920089 None:intergenic
AGTAATTGTTCTGTTGGCGG+GGG 0.562575 7.3:-14919763 MS.gene23521:CDS
AATACACAATATGAAGGTAA+AGG 0.562950 7.3:-14919082 MS.gene23521:CDS
GAATCCTACAAGAAGGGCCA+TGG 0.564204 7.3:-14920218 MS.gene23521:CDS
ACACATGGTTGCTGGACCAT+TGG 0.564785 7.3:-14919149 MS.gene23521:CDS
ATGGTTGCGTGGTGGTAGAA+TGG 0.566503 7.3:-14919725 MS.gene23521:CDS
ATGGAAAGAATCCTACAAGA+AGG 0.567132 7.3:-14920225 MS.gene23521:CDS
GAGTAATTGTTCTGTTGGCG+GGG 0.569786 7.3:-14919764 MS.gene23521:CDS
TCAAACAGAGCTTTCAAGGT+GGG 0.573440 7.3:-14920839 MS.gene23521:CDS
GACATCCAACCAGATACGTC+AGG 0.576341 7.3:+14920067 None:intergenic
AAATAACTCTCATGCTAACA+GGG 0.576389 7.3:-14919351 MS.gene23521:CDS
TTATCTGCCTGAGTTGTACT+GGG 0.577157 7.3:+14919013 None:intergenic
ATAATTCAACAGGAAATGAT+GGG 0.577387 7.3:-14919318 MS.gene23521:CDS
GTGGATGGTGTGCAACTTTG+GGG 0.578412 7.3:-14919802 MS.gene23521:CDS
GCTGGACAAACTTCTGAACC+AGG 0.578871 7.3:-14919214 MS.gene23521:CDS
GGTAGAATGGCTGGTTGTGG+CGG 0.581756 7.3:-14919712 MS.gene23521:CDS
TGCACACCATCCACAAAACC+AGG 0.582135 7.3:+14919811 None:intergenic
ATAGCGTAGTGATCCGAAGA+AGG 0.589905 7.3:+14918168 None:intergenic
ATGGTGTTCGAGCAAGAAGA+TGG 0.591811 7.3:-14919937 MS.gene23521:CDS
TGGAAAGAATCCTACAAGAA+GGG 0.593481 7.3:-14920224 MS.gene23521:CDS
TGAAACCAAGAAGATTTGGA+GGG 0.594774 7.3:-14920674 MS.gene23521:CDS
AAGTGTTATTGGTCCTAATG+GGG 0.597553 7.3:-14919527 MS.gene23521:CDS
GGGCCATCCCTTATCACCAA+TGG 0.597570 7.3:+14919133 None:intergenic
GGTGCGGTTCCAATTCATGC+AGG 0.598898 7.3:-14920343 MS.gene23521:CDS
TCAATAATTATTATGGACCC+TGG 0.599627 7.3:-14920017 MS.gene23521:CDS
TGCATGAATTGGAACCGCAC+CGG 0.602172 7.3:+14920345 None:intergenic
CCGCCAACAGAACAATTACT+CGG 0.602315 7.3:+14919766 None:intergenic
AGAATTCAGAATTAGTCACT+TGG 0.604766 7.3:+14919272 None:intergenic
AGGTGTTACCATTGATCAGG+TGG 0.605058 7.3:-14920289 MS.gene23521:CDS
AGAAAGCCATCAAACGTCCA+TGG 0.608192 7.3:+14920201 None:intergenic
GATGTACATGCGTATTTGTG+TGG 0.612210 7.3:-14919992 MS.gene23521:CDS
AACAATCGGGCAAACTCCAT+AGG 0.614031 7.3:+14918029 None:intergenic
TCAGGCAGATAATGTAAGCA+TGG 0.614467 7.3:-14919002 MS.gene23521:CDS
AATACGCATGTACATCCACC+AGG 0.614615 7.3:+14919999 None:intergenic
ATCTGGTTGGATGTCATATG+GGG 0.614751 7.3:-14920059 MS.gene23521:CDS
ATGGCTGCTGCTAATGCTAG+AGG 0.614946 7.3:-14919421 MS.gene23521:CDS
CCTGATCAATGGTAACACCT+TGG 0.619987 7.3:+14920292 None:intergenic
AAAACCAAGTCACTATCAGA+AGG 0.622056 7.3:-14919456 MS.gene23521:CDS
AACTTCTGAACCAGGGCGGG+TGG 0.622314 7.3:-14919206 MS.gene23521:CDS
GGTGTTGCTGATGTTAATGA+AGG 0.624182 7.3:-14919652 MS.gene23521:CDS
AATTCGACCCAGTACAACTC+AGG 0.625472 7.3:-14919020 MS.gene23521:CDS
TGAAGGTCCTTTCAATGTGG+TGG 0.626039 7.3:-14919635 MS.gene23521:CDS
GATTATGGGAGATAGGATCT+GGG 0.626603 7.3:-14920868 None:intergenic
TGAATTCTCCATAACTGATG+GGG 0.626728 7.3:-14919257 MS.gene23521:CDS
GTGCTGGACTATGTGAATGA+AGG 0.628206 7.3:-14918947 MS.gene23521:CDS
GAAGCTGTTGACTGACAAGC+CGG 0.633439 7.3:-14920364 MS.gene23521:CDS
GGACCATTGGTGATAAGGGA+TGG 0.635357 7.3:-14919136 MS.gene23521:CDS
TGCACAACCTGTAAATCACG+TGG 0.636937 7.3:+14919112 None:intergenic
GAGGACCTGACGTATCTGGT+TGG 0.649747 7.3:-14920072 MS.gene23521:CDS
GTGCTTAGGAAGGTCAACAT+TGG 0.651292 7.3:-14920174 MS.gene23521:CDS
AGCCTCTTGTGACAAATCAG+AGG 0.651641 7.3:+14920410 None:intergenic
TGAGCCGCTGAAGACATGTA+TGG 0.652025 7.3:-14919956 MS.gene23521:CDS
TGTCCTAAGAGACTAGAACC+TGG 0.654149 7.3:-14919829 MS.gene23521:CDS
TGCTGACACAGTCCTAGATG+AGG 0.664295 7.3:-14920142 MS.gene23521:CDS
GATTCTCAAGAACTGCATCA+GGG 0.668008 7.3:+14918199 None:intergenic
GACAAACTTCTGAACCAGGG+CGG 0.669992 7.3:-14919210 MS.gene23521:CDS
AACACCATACATGTCTTCAG+CGG 0.670801 7.3:+14919952 None:intergenic
ATAATTATTATGGACCCTGG+TGG 0.671752 7.3:-14920014 MS.gene23521:CDS
CAAATCAGAGGATCCAGCTG+AGG 0.674198 7.3:+14920422 None:intergenic
GTGTTGTGTCACATTTACCA+TGG 0.676986 7.3:-14920484 MS.gene23521:CDS
TGTTGACTGACAAGCCGGTG+CGG 0.678517 7.3:-14920359 MS.gene23521:CDS
CTGGACAAACTTCTGAACCA+GGG 0.679697 7.3:-14919213 MS.gene23521:CDS
AGTGTTATTGGTCCTAATGG+GGG 0.680741 7.3:-14919526 MS.gene23521:CDS
GTCAAACAGAGCTTTCAAGG+TGG 0.683892 7.3:-14920840 MS.gene23521:CDS
ACCGGTAATGACAAGACACA+TGG 0.693059 7.3:-14919164 MS.gene23521:CDS
GTGAATAAATGGTTGCGTGG+TGG 0.701823 7.3:-14919733 MS.gene23521:CDS
TGTGGCGGCCGTAATGATGG+AGG 0.703603 7.3:-14919697 MS.gene23521:CDS
GGCAGATAATGTAAGCATGG+TGG 0.710213 7.3:-14918999 MS.gene23521:CDS
ACTGTGAATAAATGGTTGCG+TGG 0.719427 7.3:-14919736 MS.gene23521:CDS
CCTCATGCATAAAACCAAAG+GGG 0.728043 7.3:+14920091 None:intergenic
GCACAACCTGTAAATCACGT+GGG 0.763972 7.3:+14919113 None:intergenic
TAATGAAGGTCCTTTCAATG+TGG 0.766457 7.3:-14919638 MS.gene23521:CDS
ATACGCATGTACATCCACCA+GGG 0.774060 7.3:+14920000 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGATATCAATAATTATTA+TGG - chr7.3:14918838-14918857 MS.gene23521:intron 10.0%
!!! ATTTTAAACTATGAATTGTA+CGG + chr7.3:14920081-14920100 None:intergenic 15.0%
!! AAATAATTAGTTGGAATTGT+AGG - chr7.3:14920041-14920060 MS.gene23521:CDS 20.0%
!! AATAATTAGTTGGAATTGTA+GGG - chr7.3:14920042-14920061 MS.gene23521:CDS 20.0%
!! ACAATTGTTTCAGTAAATAA+AGG + chr7.3:14919981-14920000 None:intergenic 20.0%
!! ATTTACTGAAACAATTGTAA+TGG - chr7.3:14919983-14920002 MS.gene23521:CDS 20.0%
!! CAATTGTTTCAGTAAATAAA+GGG + chr7.3:14919980-14919999 None:intergenic 20.0%
!! TTTAATCTAAGAAGATTTGT+TGG - chr7.3:14918229-14918248 MS.gene23521:intron 20.0%
!! TTTGTATTGTTCAGATTAAA+AGG + chr7.3:14919381-14919400 None:intergenic 20.0%
!!! ATTCCAACTAATTATTTTCA+TGG + chr7.3:14920038-14920057 None:intergenic 20.0%
!!! TTAATCTAAGAAGATTTGTT+GGG - chr7.3:14918230-14918249 MS.gene23521:intron 20.0%
!!! TTTTAAACTATGAATTGTAC+GGG + chr7.3:14920080-14920099 None:intergenic 20.0%
! AAAAGAAGGGTAATAATGAA+AGG - chr7.3:14920473-14920492 MS.gene23521:CDS 25.0%
! AAAGAAGGGTAATAATGAAA+GGG - chr7.3:14920474-14920493 MS.gene23521:CDS 25.0%
! AATAATTCAACAGGAAATGA+TGG - chr7.3:14919543-14919562 MS.gene23521:CDS 25.0%
! AATACACAATATGAAGGTAA+AGG - chr7.3:14919780-14919799 MS.gene23521:CDS 25.0%
! AATACAGGTAATAATTCAAC+AGG - chr7.3:14919534-14919553 MS.gene23521:CDS 25.0%
! ACACAAAATACACAATATGA+AGG - chr7.3:14919774-14919793 MS.gene23521:CDS 25.0%
! AGTTAAAATCATATGTGGTA+GGG - chr7.3:14919287-14919306 MS.gene23521:CDS 25.0%
! ATAATTAGTTGGAATTGTAG+GGG - chr7.3:14920043-14920062 MS.gene23521:CDS 25.0%
! ATAATTCAACAGGAAATGAT+GGG - chr7.3:14919544-14919563 MS.gene23521:CDS 25.0%
! GAGATAACAGATACTAATAA+AGG - chr7.3:14920307-14920326 MS.gene23521:CDS 25.0%
! TATACATGGTTTAAAAGTCT+TGG - chr7.3:14920574-14920593 MS.gene23521:CDS 25.0%
! TATTCCAACTTATCAACAAT+CGG + chr7.3:14920850-14920869 None:intergenic 25.0%
! TCATTTAAATACGAGAAACT+TGG - chr7.3:14918964-14918983 MS.gene23521:CDS 25.0%
! TTTAAACTATGAATTGTACG+GGG + chr7.3:14920079-14920098 None:intergenic 25.0%
!! ATCAACATTGAAATTTTCCA+TGG + chr7.3:14918398-14918417 None:intergenic 25.0%
!! CGCAATTTTCAAATATTCAA+TGG - chr7.3:14918059-14918078 MS.gene23521:intron 25.0%
!! CTCTAAAAGTAATAAAACTG+AGG - chr7.3:14920150-14920169 MS.gene23521:CDS 25.0%
!! GACTTTTAAACCATGTATAA+AGG + chr7.3:14920573-14920592 None:intergenic 25.0%
!! TGTTTTACTGTGAATAAACA+AGG - chr7.3:14920202-14920221 MS.gene23521:CDS 25.0%
AAATAACTCTCATGCTAACA+GGG - chr7.3:14919511-14919530 MS.gene23521:CDS 30.0%
AATGAAGTCTCCTTGAAATT+GGG + chr7.3:14918127-14918146 None:intergenic 30.0%
AATTTACCGTGGTGTATAAT+AGG - chr7.3:14920421-14920440 MS.gene23521:CDS 30.0%
ACAGATATGACGTTGAAATT+TGG - chr7.3:14918098-14918117 MS.gene23521:intron 30.0%
AGAATTCAGAATTAGTCACT+TGG + chr7.3:14919593-14919612 None:intergenic 30.0%
AGATAGTTTCACAAAGATAG+AGG + chr7.3:14920132-14920151 None:intergenic 30.0%
ATTCCAACTTATCAACAATC+GGG + chr7.3:14920849-14920868 None:intergenic 30.0%
ATTTACCGTGGTGTATAATA+GGG - chr7.3:14920422-14920441 MS.gene23521:CDS 30.0%
CAAATGTTTCAAATTTACCG+TGG - chr7.3:14920410-14920429 MS.gene23521:CDS 30.0%
CAGATACTAATAAAGGTAAG+TGG - chr7.3:14920314-14920333 MS.gene23521:CDS 30.0%
CAGCCATGAAAATAATTAGT+TGG - chr7.3:14920032-14920051 MS.gene23521:CDS 30.0%
GAGTTAAAATCATATGTGGT+AGG - chr7.3:14919286-14919305 MS.gene23521:CDS 30.0%
GGAAGAGTTAAAATCATATG+TGG - chr7.3:14919282-14919301 MS.gene23521:CDS 30.0%
GTTAAAATCATATGTGGTAG+GGG - chr7.3:14919288-14919307 MS.gene23521:CDS 30.0%
TAATGAAGTCTCCTTGAAAT+TGG + chr7.3:14918128-14918147 None:intergenic 30.0%
TAATTAGTTGGAATTGTAGG+GGG - chr7.3:14920044-14920063 MS.gene23521:CDS 30.0%
TACTGAAACAATTGTAATGG+CGG - chr7.3:14919986-14920005 MS.gene23521:CDS 30.0%
TCAATAATTATTATGGACCC+TGG - chr7.3:14918845-14918864 MS.gene23521:intron 30.0%
TCCCTAATAATAACAGAAGA+CGG - chr7.3:14920359-14920378 MS.gene23521:CDS 30.0%
! ACTATCAGAAGGTTAGTTAA+TGG - chr7.3:14919417-14919436 MS.gene23521:CDS 30.0%
! AGAAATGTTGTTTGTGATTC+TGG - chr7.3:14920520-14920539 MS.gene23521:CDS 30.0%
! AGGAACTAAAGTATGTTTTG+GGG - chr7.3:14920170-14920189 MS.gene23521:CDS 30.0%
! ATTCCAATTTTACCACCAAT+GGG - chr7.3:14918612-14918631 MS.gene23521:intron 30.0%
! GAGGAACTAAAGTATGTTTT+GGG - chr7.3:14920169-14920188 MS.gene23521:CDS 30.0%
! TATTCCAATTTTACCACCAA+TGG - chr7.3:14918611-14918630 MS.gene23521:intron 30.0%
! TGAGGAACTAAAGTATGTTT+TGG - chr7.3:14920168-14920187 MS.gene23521:CDS 30.0%
! TGTTTTATACTGGAATTCGT+CGG - chr7.3:14920240-14920259 MS.gene23521:CDS 30.0%
! TTATTACCCTTCTTTTCATG+AGG + chr7.3:14920469-14920488 None:intergenic 30.0%
!! AGAAAATGTGAGAGCATTAA+AGG + chr7.3:14918169-14918188 None:intergenic 30.0%
!! TTTCTGAAACCAAGAAGATT+TGG - chr7.3:14918184-14918203 MS.gene23521:CDS 30.0%
!!! GATTTTAACTCTTCCAAACA+GGG + chr7.3:14919277-14919296 None:intergenic 30.0%
!!! TGATTTTAACTCTTCCAAAC+AGG + chr7.3:14919278-14919297 None:intergenic 30.0%
AAAACCAAGTCACTATCAGA+AGG - chr7.3:14919406-14919425 MS.gene23521:CDS 35.0%
AAAATCCCTCCAAATCTTCT+TGG + chr7.3:14918196-14918215 None:intergenic 35.0%
AAAGTCAAACAGAGCTTTCA+AGG - chr7.3:14918019-14918038 MS.gene23521:CDS 35.0%
AATCCGAGTAATTGTTCTGT+TGG - chr7.3:14919093-14919112 MS.gene23521:CDS 35.0%
AATTTGGCATCCCAATTTCA+AGG - chr7.3:14918114-14918133 MS.gene23521:intron 35.0%
ACCTGATGCTTTATAAGGAA+TGG - chr7.3:14918278-14918297 MS.gene23521:intron 35.0%
AGGAGAGACTTTCAAAACTT+TGG - chr7.3:14918539-14918558 MS.gene23521:intron 35.0%
ATAATTATTATGGACCCTGG+TGG - chr7.3:14918848-14918867 MS.gene23521:intron 35.0%
ATGGAAAGAATCCTACAAGA+AGG - chr7.3:14918637-14918656 MS.gene23521:intron 35.0%
CAAATAACTCTCATGCTAAC+AGG - chr7.3:14919510-14919529 MS.gene23521:CDS 35.0%
CAGAAGGTTACCTTTATACA+TGG - chr7.3:14920560-14920579 MS.gene23521:CDS 35.0%
CAGGTATTTAATATCCCCTT+TGG - chr7.3:14918757-14918776 MS.gene23521:intron 35.0%
CCCGTCTTCTGTTATTATTA+GGG + chr7.3:14920363-14920382 None:intergenic 35.0%
CCCTAATAATAACAGAAGAC+GGG - chr7.3:14920360-14920379 MS.gene23521:CDS 35.0%
CCTAGATGAGGTTGAAATAT+GGG - chr7.3:14918732-14918751 MS.gene23521:intron 35.0%
CCTTGTCTGTGTTTATAAAC+CGG - chr7.3:14920102-14920121 MS.gene23521:CDS 35.0%
CTGAATTCTCCATAACTGAT+GGG - chr7.3:14919604-14919623 MS.gene23521:CDS 35.0%
CTTTCTCCTCATGAAAAGAA+GGG - chr7.3:14920460-14920479 MS.gene23521:CDS 35.0%
GTAATAATGAAAGGGCGAAT+TGG - chr7.3:14920482-14920501 MS.gene23521:CDS 35.0%
TAATAATAACAGAAGACGGG+AGG - chr7.3:14920363-14920382 MS.gene23521:CDS 35.0%
TAATGAAGGTCCTTTCAATG+TGG - chr7.3:14919224-14919243 MS.gene23521:CDS 35.0%
TATCTGGTTGGATGTCATAT+GGG - chr7.3:14918802-14918821 MS.gene23521:intron 35.0%
TCACAAAGATAGAGGATATC+CGG + chr7.3:14920124-14920143 None:intergenic 35.0%
TCCCGTCTTCTGTTATTATT+AGG + chr7.3:14920364-14920383 None:intergenic 35.0%
TCCTAGATGAGGTTGAAATA+TGG - chr7.3:14918731-14918750 MS.gene23521:intron 35.0%
TCCTCATGCATAAAACCAAA+GGG + chr7.3:14918775-14918794 None:intergenic 35.0%
TCTGAATTCTCCATAACTGA+TGG - chr7.3:14919603-14919622 MS.gene23521:CDS 35.0%
TCTTTCTCCTCATGAAAAGA+AGG - chr7.3:14920459-14920478 MS.gene23521:CDS 35.0%
TGAAACCAAGAAGATTTGGA+GGG - chr7.3:14918188-14918207 MS.gene23521:CDS 35.0%
TGAATTCTCCATAACTGATG+GGG - chr7.3:14919605-14919624 MS.gene23521:CDS 35.0%
TGCTATTGTTGTGGTATCTT+GGG - chr7.3:14918994-14919013 MS.gene23521:CDS 35.0%
TGGAAAGAATCCTACAAGAA+GGG - chr7.3:14918638-14918657 MS.gene23521:intron 35.0%
TTTACCGTGGTGTATAATAG+GGG - chr7.3:14920423-14920442 MS.gene23521:CDS 35.0%
! AAGTGTTATTGGTCCTAATG+GGG - chr7.3:14919335-14919354 MS.gene23521:CDS 35.0%
! ACAAGTGTTATTGGTCCTAA+TGG - chr7.3:14919333-14919352 MS.gene23521:CDS 35.0%
! ACCATTCCTTATAAAGCATC+AGG + chr7.3:14918282-14918301 None:intergenic 35.0%
! AGAGTTATTTGCTGATGTGT+TGG + chr7.3:14919501-14919520 None:intergenic 35.0%
! AGGTTAGTCACAAGTGTTAT+TGG - chr7.3:14919324-14919343 MS.gene23521:CDS 35.0%
! ATTTTACCACCAATGGGATA+TGG - chr7.3:14918618-14918637 MS.gene23521:intron 35.0%
! CAAGTGTTATTGGTCCTAAT+GGG - chr7.3:14919334-14919353 MS.gene23521:CDS 35.0%
! CAGAAGGTTAGTTAATGGTA+TGG - chr7.3:14919422-14919441 MS.gene23521:CDS 35.0%
! CTAATTATTTTCATGGCTGC+TGG + chr7.3:14920031-14920050 None:intergenic 35.0%
! GAGTTATTTGCTGATGTGTT+GGG + chr7.3:14919500-14919519 None:intergenic 35.0%
! TATCCCATTGGTGGTAAAAT+TGG + chr7.3:14918618-14918637 None:intergenic 35.0%
! TTGAAAGCTCTGTTTGACTT+TGG + chr7.3:14918020-14918039 None:intergenic 35.0%
! TTGCTATTGTTGTGGTATCT+TGG - chr7.3:14918993-14919012 MS.gene23521:CDS 35.0%
!! GAATTCTCTTTTTCACAGCA+GGG + chr7.3:14919827-14919846 None:intergenic 35.0%
!!! GGTGTATTTTGCTATTGTTG+TGG - chr7.3:14918985-14919004 MS.gene23521:CDS 35.0%
AAAGTCTCTCCTGCATGAAT+TGG + chr7.3:14918531-14918550 None:intergenic 40.0%
AACACCATACATGTCTTCAG+CGG + chr7.3:14918913-14918932 None:intergenic 40.0%
AAGTCCCCTATTATACACCA+CGG + chr7.3:14920430-14920449 None:intergenic 40.0%
AATAAACAAGGTCAGAGTGG+TGG - chr7.3:14920214-14920233 MS.gene23521:CDS 40.0%
ACCATGTGTCTTGTCATTAC+CGG + chr7.3:14919702-14919721 None:intergenic 40.0%
ACTGATAAGTGGAGTTCCTA+TGG - chr7.3:14920817-14920836 MS.gene23521:CDS 40.0%
ACTGTGAATAAATGGTTGCG+TGG - chr7.3:14919126-14919145 MS.gene23521:CDS 40.0%
AGATTCTCAAGAACTGCATC+AGG + chr7.3:14920667-14920686 None:intergenic 40.0%
AGCTTTCAAGGTGGGAAATT+AGG - chr7.3:14918031-14918050 MS.gene23521:CDS 40.0%
AGGCAACACTCTTCTGTTAT+TGG + chr7.3:14920743-14920762 None:intergenic 40.0%
AGTGACGAAACTACTAAAGC+CGG + chr7.3:14920800-14920819 None:intergenic 40.0%
ATCTGGTTGGATGTCATATG+GGG - chr7.3:14918803-14918822 MS.gene23521:intron 40.0%
ATTATCTGCCTGAGTTGTAC+TGG + chr7.3:14919853-14919872 None:intergenic 40.0%
CAACGACCTGATGCTTTATA+AGG - chr7.3:14918273-14918292 MS.gene23521:intron 40.0%
CCCATATTTCAACCTCATCT+AGG + chr7.3:14918735-14918754 None:intergenic 40.0%
CCGGTTTATAAACACAGACA+AGG + chr7.3:14920105-14920124 None:intergenic 40.0%
CCTCATGCATAAAACCAAAG+GGG + chr7.3:14918774-14918793 None:intergenic 40.0%
CTGAAACCAAGAAGATTTGG+AGG - chr7.3:14918187-14918206 MS.gene23521:CDS 40.0%
CTTTCAAAACTTTGGCGTTC+TGG - chr7.3:14918547-14918566 MS.gene23521:intron 40.0%
GATGTACATGCGTATTTGTG+TGG - chr7.3:14918870-14918889 MS.gene23521:intron 40.0%
GATTCTCAAGAACTGCATCA+GGG + chr7.3:14920666-14920685 None:intergenic 40.0%
GGATTCTTTCCATATCCCAT+TGG + chr7.3:14918630-14918649 None:intergenic 40.0%
GGGGTGTAACTGTGAATAAA+TGG - chr7.3:14919118-14919137 MS.gene23521:CDS 40.0%
GTAGTTTCGTCACTGATAAG+TGG - chr7.3:14920806-14920825 MS.gene23521:CDS 40.0%
GTATCTGGTTGGATGTCATA+TGG - chr7.3:14918801-14918820 MS.gene23521:intron 40.0%
GTCCTCATGCATAAAACCAA+AGG + chr7.3:14918776-14918795 None:intergenic 40.0%
GTGAATAAACAAGGTCAGAG+TGG - chr7.3:14920211-14920230 MS.gene23521:CDS 40.0%
GTGTTGTGTCACATTTACCA+TGG - chr7.3:14918378-14918397 MS.gene23521:intron 40.0%
TACCTCTTCCTCCATCATTA+CGG + chr7.3:14919176-14919195 None:intergenic 40.0%
TCAAACAGAGCTTTCAAGGT+GGG - chr7.3:14918023-14918042 MS.gene23521:CDS 40.0%
TCAGGCAGATAATGTAAGCA+TGG - chr7.3:14919860-14919879 MS.gene23521:CDS 40.0%
TGAAACAATTGTAATGGCGG+AGG - chr7.3:14919989-14920008 MS.gene23521:CDS 40.0%
TGAACAGGAAGCAAGTGATA+TGG - chr7.3:14919893-14919912 MS.gene23521:CDS 40.0%
TGGCGTCTTACTGGATATTA+TGG - chr7.3:14920334-14920353 MS.gene23521:CDS 40.0%
TTATCTGCCTGAGTTGTACT+GGG + chr7.3:14919852-14919871 None:intergenic 40.0%
TTCTTTCCATATCCCATTGG+TGG + chr7.3:14918627-14918646 None:intergenic 40.0%
! AAACCAGGTTCTAGTCTCTT+AGG + chr7.3:14919039-14919058 None:intergenic 40.0%
! AGTGTTATTGGTCCTAATGG+GGG - chr7.3:14919336-14919355 MS.gene23521:CDS 40.0%
! ATCCTCTGATTTGTCACAAG+AGG - chr7.3:14918450-14918469 MS.gene23521:intron 40.0%
! CTAACCTTCTGATAGTGACT+TGG + chr7.3:14919413-14919432 None:intergenic 40.0%
! GATGGGAGTTTGAGATTGAT+TGG - chr7.3:14919561-14919580 MS.gene23521:CDS 40.0%
! TGTTGTTTGTGATTCTGGAC+TGG - chr7.3:14920525-14920544 MS.gene23521:CDS 40.0%
! TTGCCCGATTGTTGATAAGT+TGG - chr7.3:14920843-14920862 MS.gene23521:CDS 40.0%
!! AGAGGTACTGGTAGTAGTAA+TGG - chr7.3:14919189-14919208 MS.gene23521:CDS 40.0%
!! ATAACAGAAGAGTGTTGCCT+CGG - chr7.3:14920743-14920762 MS.gene23521:CDS 40.0%
!! CGAATTCTCTTTTTCACAGC+AGG + chr7.3:14919828-14919847 None:intergenic 40.0%
!! GGTAAAGCAAAAGAAGCATC+TGG - chr7.3:14919801-14919820 MS.gene23521:CDS 40.0%
!! GGTGTTGCTGATGTTAATGA+AGG - chr7.3:14919210-14919229 MS.gene23521:CDS 40.0%
!!! GTGGTGGTCTTGTTTTATAC+TGG - chr7.3:14920230-14920249 MS.gene23521:CDS 40.0%
AAAGGTAAGTGGCGTCTTAC+TGG - chr7.3:14920325-14920344 MS.gene23521:CDS 45.0%
AACAATCGGGCAAACTCCAT+AGG + chr7.3:14920836-14920855 None:intergenic 45.0%
AATACGCATGTACATCCACC+AGG + chr7.3:14918866-14918885 None:intergenic 45.0%
AATTCGACCCAGTACAACTC+AGG - chr7.3:14919842-14919861 MS.gene23521:CDS 45.0%
ACCGGTAATGACAAGACACA+TGG - chr7.3:14919698-14919717 MS.gene23521:CDS 45.0%
AGAAAGCCATCAAACGTCCA+TGG + chr7.3:14918664-14918683 None:intergenic 45.0%
AGCCTCTTGTGACAAATCAG+AGG + chr7.3:14918455-14918474 None:intergenic 45.0%
AGTAATTGTTCTGTTGGCGG+GGG - chr7.3:14919099-14919118 MS.gene23521:CDS 45.0%
AGTTGGAATTGTAGGGGGTT+GGG - chr7.3:14920049-14920068 MS.gene23521:CDS 45.0%
ATACGCATGTACATCCACCA+GGG + chr7.3:14918865-14918884 None:intergenic 45.0%
ATAGCGTAGTGATCCGAAGA+AGG + chr7.3:14920697-14920716 None:intergenic 45.0%
ATGACAAGACACATGGTTGC+TGG - chr7.3:14919705-14919724 MS.gene23521:CDS 45.0%
ATGGTGTTCGAGCAAGAAGA+TGG - chr7.3:14918925-14918944 MS.gene23521:CDS 45.0%
CATGGTGGTTGTACTTGAAC+AGG - chr7.3:14919878-14919897 MS.gene23521:CDS 45.0%
CCGAGTAATTGTTCTGTTGG+CGG - chr7.3:14919096-14919115 MS.gene23521:CDS 45.0%
CCGCCAACAGAACAATTACT+CGG + chr7.3:14919099-14919118 None:intergenic 45.0%
CCTGATCAATGGTAACACCT+TGG + chr7.3:14918573-14918592 None:intergenic 45.0%
CGAGTAATTGTTCTGTTGGC+GGG - chr7.3:14919097-14919116 MS.gene23521:CDS 45.0%
CTCATGCTAACAGGGAATAC+AGG - chr7.3:14919519-14919538 MS.gene23521:CDS 45.0%
CTGGACAAACTTCTGAACCA+GGG - chr7.3:14919649-14919668 MS.gene23521:CDS 45.0%
GAGTAATTGTTCTGTTGGCG+GGG - chr7.3:14919098-14919117 MS.gene23521:CDS 45.0%
GCACAACCTGTAAATCACGT+GGG + chr7.3:14919752-14919771 None:intergenic 45.0%
GCGCTCTTGCTACTAAAAAC+TGG - chr7.3:14920629-14920648 MS.gene23521:CDS 45.0%
GCGTTCTCAAATTTGAACCG+AGG + chr7.3:14920763-14920782 None:intergenic 45.0%
GGCAGATAATGTAAGCATGG+TGG - chr7.3:14919863-14919882 MS.gene23521:CDS 45.0%
GGTTCAAATTTGAGAACGCC+TGG - chr7.3:14920764-14920783 MS.gene23521:CDS 45.0%
GTCAAACAGAGCTTTCAAGG+TGG - chr7.3:14918022-14918041 MS.gene23521:CDS 45.0%
GTGAATAAATGGTTGCGTGG+TGG - chr7.3:14919129-14919148 MS.gene23521:CDS 45.0%
GTGACGAAACTACTAAAGCC+GGG + chr7.3:14920799-14920818 None:intergenic 45.0%
GTGCGCAAGTAAGAAGAAAC+CGG - chr7.3:14919680-14919699 MS.gene23521:CDS 45.0%
GTGCTGGACTATGTGAATGA+AGG - chr7.3:14919915-14919934 MS.gene23521:CDS 45.0%
GTGCTTAGGAAGGTCAACAT+TGG - chr7.3:14918688-14918707 MS.gene23521:intron 45.0%
GTTCTCTTCCACCTGATCAA+TGG + chr7.3:14918584-14918603 None:intergenic 45.0%
GTTGGGATTGCTCAGTCTTA+TGG - chr7.3:14918247-14918266 MS.gene23521:intron 45.0%
TAGTTGGAATTGTAGGGGGT+TGG - chr7.3:14920048-14920067 MS.gene23521:CDS 45.0%
TGAAGGTCCTTTCAATGTGG+TGG - chr7.3:14919227-14919246 MS.gene23521:CDS 45.0%
TGAGGTTGAAATATGGGCTC+AGG - chr7.3:14918738-14918757 MS.gene23521:intron 45.0%
TGCACAACCTGTAAATCACG+TGG + chr7.3:14919753-14919772 None:intergenic 45.0%
TGTCCTAAGAGACTAGAACC+TGG - chr7.3:14919033-14919052 MS.gene23521:CDS 45.0%
TGTGGATGGTGTGCAACTTT+GGG - chr7.3:14919059-14919078 MS.gene23521:CDS 45.0%
TTGTGGATGGTGTGCAACTT+TGG - chr7.3:14919058-14919077 MS.gene23521:CDS 45.0%
! AATGATGGAGGAAGAGGTAC+TGG - chr7.3:14919177-14919196 MS.gene23521:CDS 45.0%
! AGGGCGAATTGGCTTATCAA+TGG - chr7.3:14920493-14920512 MS.gene23521:CDS 45.0%
! AGGTGTTACCATTGATCAGG+TGG - chr7.3:14918573-14918592 MS.gene23521:intron 45.0%
! CCAAGGTGTTACCATTGATC+AGG - chr7.3:14918570-14918589 MS.gene23521:intron 45.0%
! CCTTTCAATGTGGTGGTGAT+GGG - chr7.3:14919234-14919253 MS.gene23521:CDS 45.0%
! TATTTTCATGGCTGCTGGCA+GGG + chr7.3:14920026-14920045 None:intergenic 45.0%
! TCCTTTCAATGTGGTGGTGA+TGG - chr7.3:14919233-14919252 MS.gene23521:CDS 45.0%
! TGCTGGACCATTGGTGATAA+GGG - chr7.3:14919722-14919741 MS.gene23521:CDS 45.0%
! TTATTTTCATGGCTGCTGGC+AGG + chr7.3:14920027-14920046 None:intergenic 45.0%
! TTGCTGGACCATTGGTGATA+AGG - chr7.3:14919721-14919740 MS.gene23521:CDS 45.0%
!! GTAGGGGCTTTACTTTTCAC+AGG - chr7.3:14919304-14919323 MS.gene23521:CDS 45.0%
!!! CCCCTTTGGTTTTATGCATG+AGG - chr7.3:14918771-14918790 MS.gene23521:intron 45.0%
!!! CTAGAACCTGGTTTTGTGGA+TGG - chr7.3:14919045-14919064 MS.gene23521:CDS 45.0%
!!! GAGACTAGAACCTGGTTTTG+TGG - chr7.3:14919041-14919060 MS.gene23521:CDS 45.0%
AAACTTTGGCGTTCTGGCCA+AGG - chr7.3:14918553-14918572 MS.gene23521:intron 50.0%
AAGCCGTTCTTCAACAGCTC+TGG + chr7.3:14920605-14920624 None:intergenic 50.0%
ACAAACTTCTGAACCAGGGC+GGG - chr7.3:14919653-14919672 MS.gene23521:CDS 50.0%
ACACATGGTTGCTGGACCAT+TGG - chr7.3:14919713-14919732 MS.gene23521:CDS 50.0%
ATAACAGAAGACGGGAGGCA+TGG - chr7.3:14920368-14920387 MS.gene23521:CDS 50.0%
ATGGCTGCTGCTAATGCTAG+AGG - chr7.3:14919441-14919460 MS.gene23521:CDS 50.0%
ATGGCTTTCTGCTGGTGCTT+AGG - chr7.3:14918674-14918693 MS.gene23521:intron 50.0%
ATGGTTGCGTGGTGGTAGAA+TGG - chr7.3:14919137-14919156 MS.gene23521:CDS 50.0%
CAAATCAGAGGATCCAGCTG+AGG + chr7.3:14918443-14918462 None:intergenic 50.0%
CCACCAGAGCTGTTGAAGAA+CGG - chr7.3:14920599-14920618 MS.gene23521:CDS 50.0%
CCCATCACCACCACATTGAA+AGG + chr7.3:14919237-14919256 None:intergenic 50.0%
CTGCTGAATGAAGGAGATGC+TGG - chr7.3:14919630-14919649 MS.gene23521:CDS 50.0%
CTGGCTGAGGTACATACAGA+AGG - chr7.3:14920544-14920563 MS.gene23521:CDS 50.0%
CTTTCTGCTGGTGCTTAGGA+AGG - chr7.3:14918678-14918697 MS.gene23521:intron 50.0%
GAATCCTACAAGAAGGGCCA+TGG - chr7.3:14918644-14918663 MS.gene23521:intron 50.0%
GAATCTGCCAGCACCTTCTT+CGG - chr7.3:14920681-14920700 MS.gene23521:CDS 50.0%
GACAAACTTCTGAACCAGGG+CGG - chr7.3:14919652-14919671 MS.gene23521:CDS 50.0%
GACATCCAACCAGATACGTC+AGG + chr7.3:14918798-14918817 None:intergenic 50.0%
GATCCAGCTGAGGATGCATT+TGG + chr7.3:14918433-14918452 None:intergenic 50.0%
GCTGGACAAACTTCTGAACC+AGG - chr7.3:14919648-14919667 MS.gene23521:CDS 50.0%
GGAAGCAAGTGATATGGTGC+TGG - chr7.3:14919899-14919918 MS.gene23521:CDS 50.0%
GTGGATGGTGTGCAACTTTG+GGG - chr7.3:14919060-14919079 MS.gene23521:CDS 50.0%
GTTATTGGTCCTAATGGGGG+AGG - chr7.3:14919339-14919358 MS.gene23521:CDS 50.0%
TCACCAAATGCATCCTCAGC+TGG - chr7.3:14918427-14918446 MS.gene23521:intron 50.0%
TGAGCCGCTGAAGACATGTA+TGG - chr7.3:14918906-14918925 MS.gene23521:intron 50.0%
TGCACACCATCCACAAAACC+AGG + chr7.3:14919054-14919073 None:intergenic 50.0%
TGCATGAATTGGAACCGCAC+CGG + chr7.3:14918520-14918539 None:intergenic 50.0%
TGCTGACACAGTCCTAGATG+AGG - chr7.3:14918720-14918739 MS.gene23521:intron 50.0%
TGCTTGAGCTGTGCGTTGTT+GGG - chr7.3:14918476-14918495 MS.gene23521:intron 50.0%
TTGCTTGAGCTGTGCGTTGT+TGG - chr7.3:14918475-14918494 MS.gene23521:intron 50.0%
! GAAGCTGTTGACTGACAAGC+CGG - chr7.3:14918498-14918517 MS.gene23521:intron 50.0%
! GACGTTTGATGGCTTTCTGC+TGG - chr7.3:14918666-14918685 MS.gene23521:intron 50.0%
! GGACCATTGGTGATAAGGGA+TGG - chr7.3:14919726-14919745 MS.gene23521:CDS 50.0%
! TAGTGATCCGAAGAAGGTGC+TGG + chr7.3:14920691-14920710 None:intergenic 50.0%
!! TTGTGATTCTGGACTGGCTG+AGG - chr7.3:14920531-14920550 MS.gene23521:CDS 50.0%
AAAGCCGGGATCAGCTAACC+AGG + chr7.3:14920785-14920804 None:intergenic 55.0%
ACGTCCATGGCCCTTCTTGT+AGG + chr7.3:14918651-14918670 None:intergenic 55.0%
CAGCAGAGCCCCATCAGTTA+TGG + chr7.3:14919616-14919635 None:intergenic 55.0%
GAAGGGCCATGGACGTTTGA+TGG - chr7.3:14918655-14918674 MS.gene23521:intron 55.0%
GAGGACCTGACGTATCTGGT+TGG - chr7.3:14918790-14918809 MS.gene23521:intron 55.0%
GATGGGGCTCTGCTGAATGA+AGG - chr7.3:14919621-14919640 MS.gene23521:CDS 55.0%
GCATGAGGACCTGACGTATC+TGG - chr7.3:14918786-14918805 MS.gene23521:intron 55.0%
GGATGGCCCACGTGATTTAC+AGG - chr7.3:14919743-14919762 MS.gene23521:CDS 55.0%
GGGCCATCCCTTATCACCAA+TGG + chr7.3:14919732-14919751 None:intergenic 55.0%
GGTGCGGTTCCAATTCATGC+AGG - chr7.3:14918519-14918538 MS.gene23521:intron 55.0%
TGACCTTCACCTCCCCCATT+AGG + chr7.3:14919351-14919370 None:intergenic 55.0%
TTGCGTGGTGGTAGAATGGC+TGG - chr7.3:14919141-14919160 MS.gene23521:CDS 55.0%
! AACGCCTGGTTAGCTGATCC+CGG - chr7.3:14920778-14920797 MS.gene23521:CDS 55.0%
! CCGTTCTTCAACAGCTCTGG+TGG + chr7.3:14920602-14920621 None:intergenic 55.0%
! GGCCGTAATGATGGAGGAAG+AGG - chr7.3:14919171-14919190 MS.gene23521:CDS 55.0%
! GGTAGAATGGCTGGTTGTGG+CGG - chr7.3:14919150-14919169 MS.gene23521:CDS 55.0%
! GGTGGTAGAATGGCTGGTTG+TGG - chr7.3:14919147-14919166 MS.gene23521:CDS 55.0%
! TGTTGACTGACAAGCCGGTG+CGG - chr7.3:14918503-14918522 MS.gene23521:intron 55.0%
AACAGGGCATGCTCGCTGGA+AGG + chr7.3:14919261-14919280 None:intergenic 60.0%
AACTTCTGAACCAGGGCGGG+TGG - chr7.3:14919656-14919675 MS.gene23521:CDS 60.0%
ACAGGGCATGCTCGCTGGAA+GGG + chr7.3:14919260-14919279 None:intergenic 60.0%
ATGGGGGAGGTGAAGGTCAG+TGG - chr7.3:14919352-14919371 MS.gene23521:CDS 60.0%
GGTCCTAATGGGGGAGGTGA+AGG - chr7.3:14919345-14919364 MS.gene23521:CDS 60.0%
GGTTGTGGCGGCCGTAATGA+TGG - chr7.3:14919162-14919181 MS.gene23521:CDS 60.0%
TCCAAACAGGGCATGCTCGC+TGG + chr7.3:14919265-14919284 None:intergenic 60.0%
TCCAGCGAGCATGCCCTGTT+TGG - chr7.3:14919261-14919280 MS.gene23521:CDS 60.0%
TGGGGGAGGTGAAGGTCAGT+GGG - chr7.3:14919353-14919372 MS.gene23521:CDS 60.0%
TGTGGCGGCCGTAATGATGG+AGG - chr7.3:14919165-14919184 MS.gene23521:CDS 60.0%
CTTGCGCACACCACCCGCCC+TGG + chr7.3:14919669-14919688 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 14917998 14920886 14917998 ID=MS.gene23521
chr7.3 mRNA 14917998 14920886 14917998 ID=MS.gene23521.t1;Parent=MS.gene23521
chr7.3 exon 14918925 14920886 14918925 ID=MS.gene23521.t1.exon1;Parent=MS.gene23521.t1
chr7.3 CDS 14918925 14920886 14918925 ID=cds.MS.gene23521.t1;Parent=MS.gene23521.t1
chr7.3 exon 14918157 14918229 14918157 ID=MS.gene23521.t1.exon2;Parent=MS.gene23521.t1
chr7.3 CDS 14918157 14918229 14918157 ID=cds.MS.gene23521.t1;Parent=MS.gene23521.t1
chr7.3 exon 14917998 14918074 14917998 ID=MS.gene23521.t1.exon3;Parent=MS.gene23521.t1
chr7.3 CDS 14917998 14918074 14917998 ID=cds.MS.gene23521.t1;Parent=MS.gene23521.t1
Gene Sequence

>MS.gene23521

ATGGGAGATAGGATCTGGGCCAAAGTCAAACAGAGCTTTCAAGGTGGGAAATTAGGCATCACGCAATTTTCAAATATTCAATGGTACATGATTCATTACAACAGATATGACGTTGAAATTTGGCATCCCAATTTCAAGGAGACTTCATTAGAATCAGAGTATTACTCTCCTTTAATGCTCTCACATTTTCTGAAACCAAGAAGATTTGGAGGGATTTTTCAATGCTGTAAGTTTAATCTAAGAAGATTTGTTGGGATTGCTCAGTCTTATGGAGTCAACGACCTGATGCTTTATAAGGAATGGTCTTCACAATTCAGAGAATATCACTTTCAACTCATGCAATCAACTCTCATACAACTTCTGTTCACTGTTGTTTGTGTGTGTTGTGTCACATTTACCATGGAAAATTTCAATGTTGATATTAATGATTCACCAAATGCATCCTCAGCTGGATCCTCTGATTTGTCACAAGAGGCTTTGCTTGAGCTGTGCGTTGTTGGGAAGCTGTTGACTGACAAGCCGGTGCGGTTCCAATTCATGCAGGAGAGACTTTCAAAACTTTGGCGTTCTGGCCAAGGTGTTACCATTGATCAGGTGGAAGAGAACAAGTTCATATTCCAATTTTACCACCAATGGGATATGGAAAGAATCCTACAAGAAGGGCCATGGACGTTTGATGGCTTTCTGCTGGTGCTTAGGAAGGTCAACATTGGTGAAGCTATTGCTGACACAGTCCTAGATGAGGTTGAAATATGGGCTCAGGTATTTAATATCCCCTTTGGTTTTATGCATGAGGACCTGACGTATCTGGTTGGATGTCATATGGGGCGCTATGTCTCATATGATATCAATAATTATTATGGACCCTGGTGGATGTACATGCGTATTTGTGTGGCTCTGAATGTCAATGAGCCGCTGAAGACATGTATGGTGTTCGAGCAAGAAGATGGTAATGTTGTCAATCTGTCATTTAAATACGAGAAACTTGGTGTATTTTGCTATTGTTGTGGTATCTTGGGACATACTGATCAATATTGTCCTAAGAGACTAGAACCTGGTTTTGTGGATGGTGTGCAACTTTGGGGCAAGTTCTTGAATCCGAGTAATTGTTCTGTTGGCGGGGGTGTAACTGTGAATAAATGGTTGCGTGGTGGTAGAATGGCTGGTTGTGGCGGCCGTAATGATGGAGGAAGAGGTACTGGTAGTAGTAATGGTGTTGCTGATGTTAATGAAGGTCCTTTCAATGTGGTGGTGATGGGCCCTTCCAGCGAGCATGCCCTGTTTGGAAGAGTTAAAATCATATGTGGTAGGGGCTTTACTTTTCACAGGTTAGTCACAAGTGTTATTGGTCCTAATGGGGGAGGTGAAGGTCAGTGGGTTCCTTTTAATCTGAACAATACAAACATTCAAAACCAAGTCACTATCAGAAGGTTAGTTAATGGTATGGCTGCTGCTAATGCTAGAGGTGCTTCTGCAAGTTCTCTGAATACTAATGCTAACCCAACACATCAGCAAATAACTCTCATGCTAACAGGGAATACAGGTAATAATTCAACAGGAAATGATGGGAGTTTGAGATTGATTGGCTGCAACCAAGTGACTAATTCTGAATTCTCCATAACTGATGGGGCTCTGCTGAATGAAGGAGATGCTGGACAAACTTCTGAACCAGGGCGGGTGGTGTGCGCAAGTAAGAAGAAACCGGTAATGACAAGACACATGGTTGCTGGACCATTGGTGATAAGGGATGGCCCACGTGATTTACAGGTTGTGCAGACACAAAATACACAATATGAAGGTAAAGGTAAAGCAAAAGAAGCATCTGGCCCTGCTGTGAAAAAGAGAATTCGACCCAGTACAACTCAGGCAGATAATGTAAGCATGGTGGTTGTACTTGAACAGGAAGCAAGTGATATGGTGCTGGACTATGTGAATGAAGGTAGTGCTGCTGAAGTGAACTCTGTAACTCTGCAAAACAACCCTTTATTTACTGAAACAATTGTAATGGCGGAGGCTGAAAATCAGCCCTGCCAGCAGCCATGAAAATAATTAGTTGGAATTGTAGGGGGTTGGGTAGTCCCCGTACAATTCATAGTTTAAAATACCTTGTCTGTGTTTATAAACCGGATATCCTCTATCTTTGTGAAACTATCTCTAAAAGTAATAAAACTGAGGAACTAAAGTATGTTTTGGGGTTTGATTTCTGTTTTACTGTGAATAAACAAGGTCAGAGTGGTGGTCTTGTTTTATACTGGAATTCGTCGGTTAACTGCTCAATCTCTAATTACTCAAATAATCACATTGATGCTGAGATAACAGATACTAATAAAGGTAAGTGGCGTCTTACTGGATATTATGGTTTCCCTAATAATAACAGAAGACGGGAGGCATGGAATTTTTTTAGACAACTTGCAAATGTTTCAAATTTACCGTGGTGTATAATAGGGGACTTTAATGATATTCTTTCTCCTCATGAAAAGAAGGGTAATAATGAAAGGGCGAATTGGCTTATCAATGGTTTTAGAAATGTTGTTTGTGATTCTGGACTGGCTGAGGTACATACAGAAGGTTACCTTTATACATGGTTTAAAAGTCTTGGCACCACCAGAGCTGTTGAAGAACGGCTTGATCGCGCTCTTGCTACTAAAAACTGGCAGATTCAGTTCCCTGATGCAGTTCTTGAGAATCTGCCAGCACCTTCTTCGGATCACTACGCTATTTTGCTCTCATGTGAGTCGATATCCAATAACAGAAGAGTGTTGCCTCGGTTCAAATTTGAGAACGCCTGGTTAGCTGATCCCGGCTTTAGTAGTTTCGTCACTGATAAGTGGAGTTCCTATGGAGTTTGCCCGATTGTTGATAAGTTGGAATATTGCGCTTCTGATCTAA
Protein sequence

>MS.gene23521.t1

MGDRIWAKVKQSFQGGKLGITQFSNIQWYMIHYNRYDVEIWHPNFKETSLESEYYSPLMLSHFLKPRRFGGIFQCCKFNLRRFVGIAQSYGVNDLMLYKEWSSQFREYHFQLMQSTLIQLLFTVVCVCCVTFTMENFNVDINDSPNASSAGSSDLSQEALLELCVVGKLLTDKPVRFQFMQERLSKLWRSGQGVTIDQVEENKFIFQFYHQWDMERILQEGPWTFDGFLLVLRKVNIGEAIADTVLDEVEIWAQVFNIPFGFMHEDLTYLVGCHMGRYVSYDINNYYGPWWMYMRICVALNVNEPLKTCMVFEQEDGNVVNLSFKYEKLGVFCYCCGILGHTDQYCPKRLEPGFVDGVQLWGKFLNPSNCSVGGGVTVNKWLRGGRMAGCGGRNDGGRGTGSSNGVADVNEGPFNVVVMGPSSEHALFGRVKIICGRGFTFHRLVTSVIGPNGGGEGQWVPFNLNNTNIQNQVTIRRLVNGMAAANARGASASSLNTNANPTHQQITLMLTGNTGNNSTGNDGSLRLIGCNQVTNSEFSITDGALLNEGDAGQTSEPGRVVCASKKKPVMTRHMVAGPLVIRDGPRDLQVVQTQNTQYEGKGKAKEASGPAVKKRIRPSTTQADNVSMVVVLEQEASDMVLDYVNEGSAAEVNSIQFPDAVLENLPAPSSDHYAILLSFSSLISGVPMEFARLLISWNIALLI