Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98127.t1 | AES70414.1 | 57.5 | 346 | 81 | 3 | 1 | 346 | 1 | 280 | 6.30E-100 | 374.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98127.t1 | O04244 | 27.9 | 136 | 94 | 2 | 83 | 216 | 6 | 139 | 8.1e-11 | 70.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98127.t1 | G7J017 | 57.5 | 346 | 81 | 3 | 1 | 346 | 1 | 280 | 4.6e-100 | 374.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98127.t1 | MTR_3g053920 | 57.514 | 346 | 81 | 3 | 1 | 346 | 1 | 280 | 2.46e-126 | 370 |
| MS.gene98127.t1 | MTR_2g061500 | 85.271 | 129 | 19 | 0 | 1 | 129 | 1 | 129 | 2.08e-74 | 231 |
| MS.gene98127.t1 | MTR_4g103530 | 76.238 | 101 | 23 | 1 | 55 | 155 | 1 | 100 | 2.57e-50 | 171 |
| MS.gene98127.t1 | MTR_7g011710 | 67.059 | 85 | 28 | 0 | 55 | 139 | 1 | 85 | 9.49e-36 | 130 |
| MS.gene98127.t1 | MTR_6g033215 | 34.010 | 197 | 123 | 3 | 5 | 199 | 103 | 294 | 1.46e-33 | 129 |
| MS.gene98127.t1 | MTR_0010s0370 | 35.429 | 175 | 109 | 2 | 7 | 177 | 3 | 177 | 1.62e-31 | 120 |
| MS.gene98127.t1 | MTR_0010s0350 | 35.429 | 175 | 109 | 2 | 7 | 177 | 3 | 177 | 1.62e-31 | 120 |
| MS.gene98127.t1 | MTR_8g463110 | 58.475 | 118 | 47 | 1 | 289 | 404 | 1 | 118 | 5.89e-29 | 121 |
| MS.gene98127.t1 | MTR_8g463110 | 49.057 | 106 | 24 | 1 | 428 | 503 | 219 | 324 | 1.74e-24 | 107 |
| MS.gene98127.t1 | MTR_4g020630 | 41.441 | 111 | 35 | 1 | 423 | 503 | 150 | 260 | 2.91e-19 | 90.9 |
| MS.gene98127.t1 | MTR_6g034215 | 43.243 | 111 | 33 | 1 | 419 | 499 | 214 | 324 | 4.80e-19 | 88.6 |
| MS.gene98127.t1 | MTR_1g036720 | 35.780 | 109 | 68 | 1 | 7 | 113 | 3 | 111 | 1.62e-15 | 73.2 |
| MS.gene98127.t1 | MTR_7g063500 | 54.000 | 50 | 23 | 0 | 454 | 503 | 53 | 102 | 2.09e-13 | 67.4 |
| MS.gene98127.t1 | MTR_3g044860 | 48.718 | 78 | 32 | 2 | 423 | 494 | 106 | 181 | 4.25e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98127.t1 | AT2G17920 | 26.636 | 214 | 149 | 5 | 8 | 216 | 9 | 219 | 1.55e-18 | 86.7 |
| MS.gene98127.t1 | AT3G31430 | 28.022 | 182 | 125 | 2 | 36 | 215 | 134 | 311 | 7.94e-16 | 79.3 |
| MS.gene98127.t1 | AT2G41590 | 25.980 | 204 | 147 | 2 | 15 | 216 | 18 | 219 | 8.81e-16 | 79.3 |
| MS.gene98127.t1 | AT3G57587 | 27.027 | 185 | 127 | 4 | 36 | 216 | 39 | 219 | 1.10e-15 | 79.0 |
| MS.gene98127.t1 | AT5G36228 | 27.179 | 195 | 134 | 4 | 36 | 226 | 39 | 229 | 1.34e-15 | 79.0 |
| MS.gene98127.t1 | AT2G13450 | 27.869 | 183 | 126 | 4 | 36 | 215 | 39 | 218 | 1.72e-15 | 79.0 |
| MS.gene98127.t1 | AT5G18636 | 23.368 | 291 | 195 | 7 | 36 | 314 | 39 | 313 | 1.93e-14 | 75.5 |
| MS.gene98127.t1 | AT5G25200 | 26.230 | 183 | 131 | 2 | 36 | 216 | 39 | 219 | 2.02e-14 | 75.1 |
| MS.gene98127.t1 | AT2G02103 | 26.776 | 183 | 130 | 2 | 36 | 216 | 39 | 219 | 2.05e-14 | 75.5 |
| MS.gene98127.t1 | AT3G47920 | 27.465 | 142 | 99 | 2 | 77 | 216 | 9 | 148 | 1.50e-13 | 72.0 |
| MS.gene98127.t1 | AT4G02000 | 27.941 | 136 | 94 | 2 | 83 | 216 | 6 | 139 | 1.16e-12 | 69.3 |
Find 134 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCCACTTTATGGTGAAAT+TGG | 0.185116 | 4.1:+89348905 | None:intergenic |
| CGTTGAATCACATCGAGTTT+TGG | 0.214227 | 4.1:-89348789 | MS.gene98127:CDS |
| CGGATTTCGTGTTTGATTCT+TGG | 0.240163 | 4.1:-89347065 | MS.gene98127:CDS |
| CACGAGTAGCATCCACTTTA+TGG | 0.243539 | 4.1:+89348896 | None:intergenic |
| CCTATACCTTGACCTACTTT+TGG | 0.251887 | 4.1:+89348730 | None:intergenic |
| TGTCACAGGTGTGGAGTTCT+TGG | 0.261224 | 4.1:-89348532 | MS.gene98127:CDS |
| AGGTTCATGGTTTACCCTTT+GGG | 0.288116 | 4.1:-89348762 | MS.gene98127:CDS |
| CGGTTCCGTTCTCTAGGTTA+AGG | 0.291371 | 4.1:+89349079 | None:intergenic |
| CAGGTTCATGGTTTACCCTT+TGG | 0.292128 | 4.1:-89348763 | MS.gene98127:CDS |
| CCAAAAGTAGGTCAAGGTAT+AGG | 0.305336 | 4.1:-89348730 | MS.gene98127:CDS |
| TTGCTGCCCTCTTCTTCTTC+AGG | 0.311022 | 4.1:-89348160 | MS.gene98127:CDS |
| CCGATGATGGAGTTCGTAAC+TGG | 0.311235 | 4.1:-89348468 | MS.gene98127:CDS |
| TTCTAAGACAGCTGCGGTTT+CGG | 0.320921 | 4.1:+89349059 | None:intergenic |
| ATTTGCTGCTGATAGGGAAT+TGG | 0.330634 | 4.1:-89347984 | MS.gene98127:CDS |
| AGACATACGCTCGCTGAAAT+AGG | 0.339311 | 4.1:+89348990 | None:intergenic |
| GAATTGGGAAACTTTGTAAT+AGG | 0.344946 | 4.1:-89347968 | MS.gene98127:CDS |
| GAGATACGGCTGCAAGGTTC+TGG | 0.346597 | 4.1:-89346915 | MS.gene98127:CDS |
| TGATAACTTTCATATCGTTA+TGG | 0.358324 | 4.1:-89348848 | MS.gene98127:CDS |
| CAAAGGAGCAGTGACATCTA+TGG | 0.358698 | 4.1:+89348633 | None:intergenic |
| TAGGACCAAATGTTAGTAAT+GGG | 0.365570 | 4.1:-89347949 | MS.gene98127:CDS |
| CAAAAGTAGGTCAAGGTATA+GGG | 0.367422 | 4.1:-89348729 | MS.gene98127:CDS |
| GGTTCCGTTCTCTAGGTTAA+GGG | 0.373708 | 4.1:+89349080 | None:intergenic |
| AAATGCTTGGCACTTGGAAC+CGG | 0.379665 | 4.1:-89347094 | MS.gene98127:CDS |
| GGGCAGCAAGTGTACTTTGC+AGG | 0.380259 | 4.1:+89348174 | None:intergenic |
| TCAGCAAATGCACTAGGAAA+TGG | 0.380275 | 4.1:+89348079 | None:intergenic |
| TGATTCAACGAGACAAGGTT+TGG | 0.380424 | 4.1:+89348802 | None:intergenic |
| CGGTTTCGGTTCCGTTCTCT+AGG | 0.383297 | 4.1:+89349073 | None:intergenic |
| GTCTTAGAACATTGTTTGAT+TGG | 0.384724 | 4.1:-89349045 | MS.gene98127:CDS |
| TGTCCCAAGACGATGCATAT+TGG | 0.385709 | 4.1:-89346842 | MS.gene98127:CDS |
| CAGCAAATGCACTAGGAAAT+GGG | 0.404553 | 4.1:+89348080 | None:intergenic |
| GAGAATCATTTGCTGCTGAT+AGG | 0.409391 | 4.1:-89347991 | MS.gene98127:CDS |
| GTAGCGATCAGCCACAGATT+TGG | 0.415515 | 4.1:+89348933 | None:intergenic |
| TTTGCTGCTGATAGGGAATT+GGG | 0.424230 | 4.1:-89347983 | MS.gene98127:CDS |
| ATGTCTCGCGCTTGGAAGCC+AGG | 0.433996 | 4.1:-89348973 | MS.gene98127:CDS |
| CCGTCAAGGTTGAGGTTTGT+GGG | 0.438871 | 4.1:+89349129 | None:intergenic |
| CAGGACCGTCCAGTGGTACT+TGG | 0.444380 | 4.1:-89348115 | MS.gene98127:CDS |
| GTGATCGTAACCCTCTTGCC+TGG | 0.452901 | 4.1:+89348955 | None:intergenic |
| TTTCCAATTTCACCATAAAG+TGG | 0.464194 | 4.1:-89348908 | MS.gene98127:CDS |
| CTTTATGGTGAAATTGGAAA+AGG | 0.469780 | 4.1:+89348911 | None:intergenic |
| AGGAACTGTGGATTGTATTA+CGG | 0.469864 | 4.1:+89348674 | None:intergenic |
| TTATGAAAATGCTTGGCACT+TGG | 0.475083 | 4.1:-89347100 | MS.gene98127:CDS |
| GACTCTAGCTCGAACAAGTC+AGG | 0.476880 | 4.1:+89348490 | None:intergenic |
| ACCGTCAAGGTTGAGGTTTG+TGG | 0.481277 | 4.1:+89349128 | None:intergenic |
| ACAAGGTTTGGGACAGCACC+AGG | 0.483621 | 4.1:+89348814 | None:intergenic |
| ACGCCAATATGCATCGTCTT+GGG | 0.484231 | 4.1:+89346839 | None:intergenic |
| GACGCCAATATGCATCGTCT+TGG | 0.486875 | 4.1:+89346838 | None:intergenic |
| TTTCGTGTTTGATTCTTGGC+AGG | 0.491009 | 4.1:-89347061 | MS.gene98127:intron |
| GCACTAGGAAATGGGGCAGC+AGG | 0.495949 | 4.1:+89348088 | None:intergenic |
| TGTTGGCATGGCAGCAGGAA+TGG | 0.497095 | 4.1:+89348378 | None:intergenic |
| CAAGTACCACTGGACGGTCC+TGG | 0.498402 | 4.1:+89348116 | None:intergenic |
| GGGTTCATTCAACCAAAAGT+AGG | 0.498715 | 4.1:-89348742 | MS.gene98127:CDS |
| TGAGACACCGGTTTGAGATA+CGG | 0.500092 | 4.1:+89348442 | None:intergenic |
| ATCTCAAACCGGTGTCTCAA+AGG | 0.500269 | 4.1:-89348438 | MS.gene98127:CDS |
| AAGTAAGACCGTCAAGGTTG+AGG | 0.501757 | 4.1:+89349121 | None:intergenic |
| CCCACAAACCTCAACCTTGA+CGG | 0.502266 | 4.1:-89349129 | MS.gene98127:CDS |
| GCTCGCTGAAATAGGCGAGT+TGG | 0.513103 | 4.1:+89348998 | None:intergenic |
| AGAATCATTTGCTGCTGATA+GGG | 0.517257 | 4.1:-89347990 | MS.gene98127:CDS |
| ATAGGACCAAATGTTAGTAA+TGG | 0.519865 | 4.1:-89347950 | MS.gene98127:CDS |
| GATTCAACGAGACAAGGTTT+GGG | 0.521291 | 4.1:+89348803 | None:intergenic |
| TTTGGTTGAATGAACCCAAA+GGG | 0.522686 | 4.1:+89348748 | None:intergenic |
| CAAAAGCACCATTGCTAGCA+CGG | 0.526781 | 4.1:+89348593 | None:intergenic |
| TGCAGCTTCGAATATACTCC+AGG | 0.528769 | 4.1:-89348134 | MS.gene98127:CDS |
| CTGGGGACCGTATCTCAAAC+CGG | 0.530109 | 4.1:-89348449 | MS.gene98127:CDS |
| GAAGAAAAGAAAACGTATGC+TGG | 0.531172 | 4.1:-89348026 | MS.gene98127:CDS |
| AATGCTTGGCACTTGGAACC+GGG | 0.532749 | 4.1:-89347093 | MS.gene98127:CDS |
| GGCCACCTTGAGACGCATAT+AGG | 0.533474 | 4.1:+89348654 | None:intergenic |
| GCATGTGTTGGCATGGCAGC+AGG | 0.533614 | 4.1:+89348373 | None:intergenic |
| TGCAGTGCCTGAAGAAGAAG+AGG | 0.537044 | 4.1:+89348153 | None:intergenic |
| GACTCAACTGCTGAAGGTAC+AGG | 0.537711 | 4.1:-89348319 | MS.gene98127:CDS |
| CGTATGCTGGCCCTTCAGAA+TGG | 0.538271 | 4.1:-89348013 | MS.gene98127:CDS |
| GCGAGCGTATGTCTCGCGCT+TGG | 0.538462 | 4.1:-89348981 | MS.gene98127:CDS |
| CGATGATGGAGTTCGTAACT+GGG | 0.538470 | 4.1:-89348467 | MS.gene98127:CDS |
| TTCGAGCTAGAGTCCGATGA+TGG | 0.539232 | 4.1:-89348481 | MS.gene98127:CDS |
| ATCTTGTAACCAACGATTGG+TGG | 0.539715 | 4.1:+89348402 | None:intergenic |
| TCTCAAACCGGTGTCTCAAA+GGG | 0.539767 | 4.1:-89348437 | MS.gene98127:CDS |
| TGGCGCGTCCGTGCTAGCAA+TGG | 0.541527 | 4.1:-89348601 | MS.gene98127:CDS |
| GCAGTTGAGTCACGGCCGAC+AGG | 0.541769 | 4.1:+89348331 | None:intergenic |
| GTTGGCATGGCAGCAGGAAT+GGG | 0.545697 | 4.1:+89348379 | None:intergenic |
| CAAATGATTCTCCATTCTGA+AGG | 0.551115 | 4.1:+89348002 | None:intergenic |
| GCTACTCGTGTCCTTGAGGA+AGG | 0.552375 | 4.1:-89348883 | MS.gene98127:CDS |
| GGCCGTGACTCAACTGCTGA+AGG | 0.554193 | 4.1:-89348325 | MS.gene98127:CDS |
| CGATGTGATTCAACGAGACA+AGG | 0.559034 | 4.1:+89348797 | None:intergenic |
| TACCTTCAGCAGTTGAGTCA+CGG | 0.562564 | 4.1:+89348323 | None:intergenic |
| GCAGCACCGTGAGCATGTGT+TGG | 0.563625 | 4.1:+89348361 | None:intergenic |
| AAACCGGTGTCTCAAAGGGT+TGG | 0.568425 | 4.1:-89348433 | MS.gene98127:CDS |
| CAAAGGGTAAACCATGAACC+TGG | 0.568522 | 4.1:+89348764 | None:intergenic |
| GTTCCAACCCTTTGAGACAC+CGG | 0.569839 | 4.1:+89348430 | None:intergenic |
| GTGTCCTTGAGGAAGGTCCA+TGG | 0.573573 | 4.1:-89348876 | MS.gene98127:CDS |
| GTTATGGATCGTATCTCCCC+TGG | 0.574136 | 4.1:-89348832 | MS.gene98127:CDS |
| GCAGGTAAACCAAGTACCAC+TGG | 0.575821 | 4.1:+89348106 | None:intergenic |
| CGCTTGGAAGCCAGGCAAGA+GGG | 0.577013 | 4.1:-89348965 | MS.gene98127:CDS |
| CAAGGTTCTGGTGAAGAACA+AGG | 0.578169 | 4.1:-89346903 | MS.gene98127:CDS |
| GCATCATCAGCAAATGCACT+AGG | 0.580949 | 4.1:+89348073 | None:intergenic |
| GGGATCTTGTAACCAACGAT+TGG | 0.583369 | 4.1:+89348399 | None:intergenic |
| GATGATGCAAATGAAGAGAA+TGG | 0.589763 | 4.1:-89348058 | MS.gene98127:CDS |
| AAGGTCGCATGTTTGAACTT+CGG | 0.592588 | 4.1:-89346884 | MS.gene98127:CDS |
| GCCATGCCAACACATGCTCA+CGG | 0.598118 | 4.1:-89348367 | MS.gene98127:CDS |
| GAACTGCTGCCACCAATCGT+TGG | 0.601781 | 4.1:-89348411 | MS.gene98127:CDS |
| ACCGTGAGCATGTGTTGGCA+TGG | 0.606917 | 4.1:+89348366 | None:intergenic |
| GGACCAAATGTTAGTAATGG+GGG | 0.608651 | 4.1:-89347947 | MS.gene98127:CDS |
| CCAGTTACGAACTCCATCAT+CGG | 0.608923 | 4.1:+89348468 | None:intergenic |
| GTAGACATATGCAAGAGATA+CGG | 0.609239 | 4.1:-89346929 | MS.gene98127:CDS |
| TGCAAATGAAGAGAATGGCT+CGG | 0.609806 | 4.1:-89348053 | MS.gene98127:CDS |
| ATTCAACCAAAAGTAGGTCA+AGG | 0.610226 | 4.1:-89348736 | MS.gene98127:CDS |
| CAGTTCCTATATGCGTCTCA+AGG | 0.610999 | 4.1:-89348659 | MS.gene98127:CDS |
| GGATGCTACTCGTGTCCTTG+AGG | 0.619337 | 4.1:-89348887 | MS.gene98127:CDS |
| GCGCTTGGAAGCCAGGCAAG+AGG | 0.619608 | 4.1:-89348966 | MS.gene98127:CDS |
| TGAAAGTTATCATAAAGCCA+TGG | 0.620426 | 4.1:+89348859 | None:intergenic |
| AGTTCTTGGTCACACAGACA+AGG | 0.621043 | 4.1:-89348518 | MS.gene98127:CDS |
| ACCAAATGTTAGTAATGGGG+GGG | 0.624421 | 4.1:-89347945 | MS.gene98127:CDS |
| AGCAAATGCACTAGGAAATG+GGG | 0.628284 | 4.1:+89348081 | None:intergenic |
| GACCAAATGTTAGTAATGGG+GGG | 0.630079 | 4.1:-89347946 | MS.gene98127:CDS |
| AAAGCCATGGACCTTCCTCA+AGG | 0.630239 | 4.1:+89348872 | None:intergenic |
| GGTGCTGCTGCTGTTCCTGT+CGG | 0.631306 | 4.1:-89348346 | MS.gene98127:CDS |
| ATGCAAGAGATACGGCTGCA+AGG | 0.632808 | 4.1:-89346921 | MS.gene98127:CDS |
| AAATGATTCTCCATTCTGAA+GGG | 0.641506 | 4.1:+89348003 | None:intergenic |
| AGGACCAAATGTTAGTAATG+GGG | 0.641632 | 4.1:-89347948 | MS.gene98127:CDS |
| AAGGTTTGGGACAGCACCAG+GGG | 0.644103 | 4.1:+89348816 | None:intergenic |
| GGTCTTACTTTGTCTGACGA+AGG | 0.646693 | 4.1:-89349108 | MS.gene98127:CDS |
| AACACGAAATCCGTAAAACC+CGG | 0.653848 | 4.1:+89347075 | None:intergenic |
| AACTTCGGAAACGTATGCAG+CGG | 0.658257 | 4.1:-89346869 | MS.gene98127:CDS |
| CTCACCCTTAACCTAGAGAA+CGG | 0.662426 | 4.1:-89349084 | MS.gene98127:CDS |
| TTCCTATATGCGTCTCAAGG+TGG | 0.674483 | 4.1:-89348656 | MS.gene98127:CDS |
| CAAGGTTTGGGACAGCACCA+GGG | 0.674653 | 4.1:+89348815 | None:intergenic |
| GGTTACGATCACCAAATCTG+TGG | 0.685127 | 4.1:-89348944 | MS.gene98127:CDS |
| TTTCACGATCAGCTAGCACA+CGG | 0.685932 | 4.1:+89349022 | None:intergenic |
| CAGACAAAGTAAGACCGTCA+AGG | 0.692981 | 4.1:+89349115 | None:intergenic |
| TATACTCCAGGACCGTCCAG+TGG | 0.700206 | 4.1:-89348122 | MS.gene98127:CDS |
| GCAGTGCCTGAAGAAGAAGA+GGG | 0.701286 | 4.1:+89348154 | None:intergenic |
| TGAGACGCATATAGGAACTG+TGG | 0.703416 | 4.1:+89348662 | None:intergenic |
| TAAGTTACAGCATGACATCG+AGG | 0.721867 | 4.1:-89346958 | MS.gene98127:intron |
| GTAAACCAAGTACCACTGGA+CGG | 0.724171 | 4.1:+89348110 | None:intergenic |
| GATGATGGAGTTCGTAACTG+GGG | 0.735382 | 4.1:-89348466 | MS.gene98127:CDS |
| ACAATGTTCTAAGACAGCTG+CGG | 0.756433 | 4.1:+89349053 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTTTAAATATGAAAAACT+TGG | - | chr4.1:89347293-89347312 | MS.gene98127:intron | 15.0% |
| !!! | AAATGTCTTTTATAGTAAGT+AGG | + | chr4.1:89348732-89348751 | None:intergenic | 20.0% |
| !!! | GTAGTTCTTCAATTTTATTA+CGG | + | chr4.1:89348143-89348162 | None:intergenic | 20.0% |
| ! | AATGTGATGTTAGCAAAAAA+AGG | - | chr4.1:89347641-89347660 | MS.gene98127:intron | 25.0% |
| ! | ATGTTAGCAAAAAAAGGTAA+CGG | - | chr4.1:89347647-89347666 | MS.gene98127:intron | 25.0% |
| ! | TGATAACTTTCATATCGTTA+TGG | - | chr4.1:89347007-89347026 | MS.gene98127:intron | 25.0% |
| !! | ATTTTCGTTATGAAAATGCT+TGG | - | chr4.1:89348748-89348767 | MS.gene98127:CDS | 25.0% |
| AAAACTCATTGGTATAAGGA+TGG | - | chr4.1:89349048-89349067 | MS.gene98127:CDS | 30.0% | |
| AAATGATTCTCCATTCTGAA+GGG | + | chr4.1:89347855-89347874 | None:intergenic | 30.0% | |
| AATAGGATAATGATCAGATG+CGG | + | chr4.1:89348682-89348701 | None:intergenic | 30.0% | |
| ATAGGACCAAATGTTAGTAA+TGG | - | chr4.1:89347905-89347924 | MS.gene98127:CDS | 30.0% | |
| CTTTATGGTGAAATTGGAAA+AGG | + | chr4.1:89346947-89346966 | None:intergenic | 30.0% | |
| GAAATCATTGACACTATTCT+TGG | - | chr4.1:89348291-89348310 | MS.gene98127:CDS | 30.0% | |
| GAATTGGGAAACTTTGTAAT+AGG | - | chr4.1:89347887-89347906 | MS.gene98127:intron | 30.0% | |
| GTCTTAGAACATTGTTTGAT+TGG | - | chr4.1:89346810-89346829 | MS.gene98127:intron | 30.0% | |
| TAGGACCAAATGTTAGTAAT+GGG | - | chr4.1:89347906-89347925 | MS.gene98127:CDS | 30.0% | |
| TGAAAGTTATCATAAAGCCA+TGG | + | chr4.1:89346999-89347018 | None:intergenic | 30.0% | |
| TGCTGAAAATGTTGATGTAA+CGG | - | chr4.1:89347967-89347986 | MS.gene98127:CDS | 30.0% | |
| TTTCCAATTTCACCATAAAG+TGG | - | chr4.1:89346947-89346966 | MS.gene98127:CDS | 30.0% | |
| ! | TCAACATTTTCAGCAAAAAG+CGG | + | chr4.1:89347962-89347981 | None:intergenic | 30.0% |
| ! | TTTTGCTAACATCACATTCT+GGG | + | chr4.1:89347639-89347658 | None:intergenic | 30.0% |
| ! | TTTTTGCTAACATCACATTC+TGG | + | chr4.1:89347640-89347659 | None:intergenic | 30.0% |
| !! | CAACTTTCTAATAGTTTTGC+AGG | - | chr4.1:89348387-89348406 | MS.gene98127:CDS | 30.0% |
| !!! | TACGAAGTTTTTTCATGCAT+CGG | - | chr4.1:89349080-89349099 | MS.gene98127:CDS | 30.0% |
| AGGACCAAATGTTAGTAATG+GGG | - | chr4.1:89347907-89347926 | MS.gene98127:CDS | 35.0% | |
| ATAGGATAATGATCAGATGC+GGG | + | chr4.1:89348681-89348700 | None:intergenic | 35.0% | |
| ATTCAACCAAAAGTAGGTCA+AGG | - | chr4.1:89347119-89347138 | MS.gene98127:CDS | 35.0% | |
| CAAAAGTAGGTCAAGGTATA+GGG | - | chr4.1:89347126-89347145 | MS.gene98127:CDS | 35.0% | |
| CAAATGATTCTCCATTCTGA+AGG | + | chr4.1:89347856-89347875 | None:intergenic | 35.0% | |
| CATCCACTTTATGGTGAAAT+TGG | + | chr4.1:89346953-89346972 | None:intergenic | 35.0% | |
| CGCAAAAACTCATTGGTATA+AGG | - | chr4.1:89349044-89349063 | MS.gene98127:CDS | 35.0% | |
| CTAGAGTCTCACTTAAGAAA+AGG | + | chr4.1:89348116-89348135 | None:intergenic | 35.0% | |
| GAAGAAAAGAAAACGTATGC+TGG | - | chr4.1:89347829-89347848 | MS.gene98127:intron | 35.0% | |
| GAAGAACTACGTTATTTGCT+TGG | - | chr4.1:89348153-89348172 | MS.gene98127:CDS | 35.0% | |
| GATGATGCAAATGAAGAGAA+TGG | - | chr4.1:89347797-89347816 | MS.gene98127:intron | 35.0% | |
| GTAGACATATGCAAGAGATA+CGG | - | chr4.1:89348926-89348945 | MS.gene98127:CDS | 35.0% | |
| TCACTTAAGAAAAGGATGTC+CGG | + | chr4.1:89348108-89348127 | None:intergenic | 35.0% | |
| TTATGAAAATGCTTGGCACT+TGG | - | chr4.1:89348755-89348774 | MS.gene98127:CDS | 35.0% | |
| TTTGGTTGAATGAACCCAAA+GGG | + | chr4.1:89347110-89347129 | None:intergenic | 35.0% | |
| ! | AGAATCATTTGCTGCTGATA+GGG | - | chr4.1:89347865-89347884 | MS.gene98127:intron | 35.0% |
| ! | AGATTTTCTACAGACGCATT+TGG | + | chr4.1:89348651-89348670 | None:intergenic | 35.0% |
| ! | AGGAACTGTGGATTGTATTA+CGG | + | chr4.1:89347184-89347203 | None:intergenic | 35.0% |
| ! | ATTTTCAGCAAAAAGCGGAT+TGG | + | chr4.1:89347957-89347976 | None:intergenic | 35.0% |
| ! | GTTGAATCACATCGAGTTTT+GGG | - | chr4.1:89347067-89347086 | MS.gene98127:CDS | 35.0% |
| ! | TTTTAGATGCAAGTGAGAAG+CGG | - | chr4.1:89348442-89348461 | MS.gene98127:CDS | 35.0% |
| !! | TTTTGGTTGAATGAACCCAA+AGG | + | chr4.1:89347111-89347130 | None:intergenic | 35.0% |
| !!! | CAAGGTATAGGGAGTTTTTT+AGG | - | chr4.1:89347137-89347156 | MS.gene98127:intron | 35.0% |
| !!! | GAGTTTTTTAGGCACTCTTA+AGG | - | chr4.1:89347148-89347167 | MS.gene98127:intron | 35.0% |
| AACACGAAATCCGTAAAACC+CGG | + | chr4.1:89348783-89348802 | None:intergenic | 40.0% | |
| AAGGTCGCATGTTTGAACTT+CGG | - | chr4.1:89348971-89348990 | MS.gene98127:CDS | 40.0% | |
| AATCCATTAATGAGCCAAGG+AGG | + | chr4.1:89348483-89348502 | None:intergenic | 40.0% | |
| AATTCCAAGCAGCAATTCGA+CGG | + | chr4.1:89348359-89348378 | None:intergenic | 40.0% | |
| AGACTCTTGAACCATGTGAA+CGG | + | chr4.1:89348558-89348577 | None:intergenic | 40.0% | |
| AGCAAATGCACTAGGAAATG+GGG | + | chr4.1:89347777-89347796 | None:intergenic | 40.0% | |
| AGGTTCATGGTTTACCCTTT+GGG | - | chr4.1:89347093-89347112 | MS.gene98127:CDS | 40.0% | |
| ATCTTGTAACCAACGATTGG+TGG | + | chr4.1:89347456-89347475 | None:intergenic | 40.0% | |
| CAGCAAATGCACTAGGAAAT+GGG | + | chr4.1:89347778-89347797 | None:intergenic | 40.0% | |
| CCAAAAGTAGGTCAAGGTAT+AGG | - | chr4.1:89347125-89347144 | MS.gene98127:CDS | 40.0% | |
| CGAAATCCATTAATGAGCCA+AGG | + | chr4.1:89348486-89348505 | None:intergenic | 40.0% | |
| CGGATTTCGTGTTTGATTCT+TGG | - | chr4.1:89348790-89348809 | MS.gene98127:CDS | 40.0% | |
| GAAAATGTTGATGTAACGGC+AGG | - | chr4.1:89347971-89347990 | MS.gene98127:CDS | 40.0% | |
| GATTCAACGAGACAAGGTTT+GGG | + | chr4.1:89347055-89347074 | None:intergenic | 40.0% | |
| GGACCAAATGTTAGTAATGG+GGG | - | chr4.1:89347908-89347927 | MS.gene98127:CDS | 40.0% | |
| GGGTTCATTCAACCAAAAGT+AGG | - | chr4.1:89347113-89347132 | MS.gene98127:CDS | 40.0% | |
| TAAGTTACAGCATGACATCG+AGG | - | chr4.1:89348897-89348916 | MS.gene98127:CDS | 40.0% | |
| TATTATGGCTATCCGAATGG+TGG | - | chr4.1:89348333-89348352 | MS.gene98127:CDS | 40.0% | |
| TCAGCAAATGCACTAGGAAA+TGG | + | chr4.1:89347779-89347798 | None:intergenic | 40.0% | |
| TGATTCAACGAGACAAGGTT+TGG | + | chr4.1:89347056-89347075 | None:intergenic | 40.0% | |
| TGCAAATGAAGAGAATGGCT+CGG | - | chr4.1:89347802-89347821 | MS.gene98127:intron | 40.0% | |
| TGTCAGATGTACCTTTCGAA+GGG | - | chr4.1:89348529-89348548 | MS.gene98127:CDS | 40.0% | |
| TTCACATGGTTCAAGAGTCT+TGG | - | chr4.1:89348558-89348577 | MS.gene98127:CDS | 40.0% | |
| TTGACACTATTCTTGGTCCT+TGG | - | chr4.1:89348298-89348317 | MS.gene98127:CDS | 40.0% | |
| TTGTCAGATGTACCTTTCGA+AGG | - | chr4.1:89348528-89348547 | MS.gene98127:CDS | 40.0% | |
| TTTAGATGCAAGTGAGAAGC+GGG | - | chr4.1:89348443-89348462 | MS.gene98127:CDS | 40.0% | |
| TTTCGTGTTTGATTCTTGGC+AGG | - | chr4.1:89348794-89348813 | MS.gene98127:CDS | 40.0% | |
| TTTGCTGCTGATAGGGAATT+GGG | - | chr4.1:89347872-89347891 | MS.gene98127:intron | 40.0% | |
| ! | ACCAAATGTTAGTAATGGGG+GGG | - | chr4.1:89347910-89347929 | MS.gene98127:CDS | 40.0% |
| ! | ATCTCTCTAGATGATGATGC+AGG | - | chr4.1:89349132-89349151 | MS.gene98127:CDS | 40.0% |
| ! | ATTTGCTGCTGATAGGGAAT+TGG | - | chr4.1:89347871-89347890 | MS.gene98127:intron | 40.0% |
| ! | CCTATACCTTGACCTACTTT+TGG | + | chr4.1:89347128-89347147 | None:intergenic | 40.0% |
| ! | CGTTGAATCACATCGAGTTT+TGG | - | chr4.1:89347066-89347085 | MS.gene98127:CDS | 40.0% |
| ! | CTGCTCCTTTGAAAAAAGAC+TGG | - | chr4.1:89347234-89347253 | MS.gene98127:intron | 40.0% |
| ! | GAAAGGTACATCTGACAAAC+CGG | + | chr4.1:89348526-89348545 | None:intergenic | 40.0% |
| ! | GACCAAATGTTAGTAATGGG+GGG | - | chr4.1:89347909-89347928 | MS.gene98127:CDS | 40.0% |
| ! | GAGAATCATTTGCTGCTGAT+AGG | - | chr4.1:89347864-89347883 | MS.gene98127:intron | 40.0% |
| !! | ACAATGTTCTAAGACAGCTG+CGG | + | chr4.1:89346805-89346824 | None:intergenic | 40.0% |
| !! | CTAATAGTTTTGCAGGTCCT+TGG | - | chr4.1:89348394-89348413 | MS.gene98127:CDS | 40.0% |
| !! | GGAGAGCATTGCAACAAAAT+AGG | + | chr4.1:89348699-89348718 | None:intergenic | 40.0% |
| !!! | AACTTGGTGTGTTTTGTCAC+AGG | - | chr4.1:89347309-89347328 | MS.gene98127:intron | 40.0% |
| !!! | GTTTTTTCATGCATCGGCAA+CGG | - | chr4.1:89349086-89349105 | MS.gene98127:CDS | 40.0% |
| AAATGCTTGGCACTTGGAAC+CGG | - | chr4.1:89348761-89348780 | MS.gene98127:CDS | 45.0% | |
| AACTTCGGAAACGTATGCAG+CGG | - | chr4.1:89348986-89349005 | MS.gene98127:CDS | 45.0% | |
| AAGTAAGACCGTCAAGGTTG+AGG | + | chr4.1:89346737-89346756 | None:intergenic | 45.0% | |
| AAGTCCCCAAAAATGCACCA+AGG | + | chr4.1:89348414-89348433 | None:intergenic | 45.0% | |
| ACGCCAATATGCATCGTCTT+GGG | + | chr4.1:89349019-89349038 | None:intergenic | 45.0% | |
| AGACATACGCTCGCTGAAAT+AGG | + | chr4.1:89346868-89346887 | None:intergenic | 45.0% | |
| AGTTCTTGGTCACACAGACA+AGG | - | chr4.1:89347337-89347356 | MS.gene98127:intron | 45.0% | |
| ATCTCAAACCGGTGTCTCAA+AGG | - | chr4.1:89347417-89347436 | MS.gene98127:intron | 45.0% | |
| CAAAGGAGCAGTGACATCTA+TGG | + | chr4.1:89347225-89347244 | None:intergenic | 45.0% | |
| CAAAGGGTAAACCATGAACC+TGG | + | chr4.1:89347094-89347113 | None:intergenic | 45.0% | |
| CACGAGTAGCATCCACTTTA+TGG | + | chr4.1:89346962-89346981 | None:intergenic | 45.0% | |
| CAGACAAAGTAAGACCGTCA+AGG | + | chr4.1:89346743-89346762 | None:intergenic | 45.0% | |
| CAGGTTCATGGTTTACCCTT+TGG | - | chr4.1:89347092-89347111 | MS.gene98127:CDS | 45.0% | |
| CAGTTCCTATATGCGTCTCA+AGG | - | chr4.1:89347196-89347215 | MS.gene98127:intron | 45.0% | |
| CCAGTTACGAACTCCATCAT+CGG | + | chr4.1:89347390-89347409 | None:intergenic | 45.0% | |
| CCGAACTAGGTACTTAAGGT+CGG | + | chr4.1:89348076-89348095 | None:intergenic | 45.0% | |
| CCGACCTTAAGTACCTAGTT+CGG | - | chr4.1:89348073-89348092 | MS.gene98127:CDS | 45.0% | |
| CGAACTAGGTACTTAAGGTC+GGG | + | chr4.1:89348075-89348094 | None:intergenic | 45.0% | |
| CGACATGCAGTACTTGATTC+CGG | - | chr4.1:89348504-89348523 | MS.gene98127:CDS | 45.0% | |
| CGATGTGATTCAACGAGACA+AGG | + | chr4.1:89347061-89347080 | None:intergenic | 45.0% | |
| CTAGACTCATATACCTAGGC+AGG | + | chr4.1:89348011-89348030 | None:intergenic | 45.0% | |
| CTCACCCTTAACCTAGAGAA+CGG | - | chr4.1:89346771-89346790 | MS.gene98127:intron | 45.0% | |
| GCATCATCAGCAAATGCACT+AGG | + | chr4.1:89347785-89347804 | None:intergenic | 45.0% | |
| GCCACTAGACTCATATACCT+AGG | + | chr4.1:89348015-89348034 | None:intergenic | 45.0% | |
| GCCTAGGTATATGAGTCTAG+TGG | - | chr4.1:89348011-89348030 | MS.gene98127:CDS | 45.0% | |
| GCGCTCTAGCAAATAACACA+TGG | - | chr4.1:89348613-89348632 | MS.gene98127:CDS | 45.0% | |
| GGGATCTTGTAACCAACGAT+TGG | + | chr4.1:89347459-89347478 | None:intergenic | 45.0% | |
| GGGTATTATGGCTATCCGAA+TGG | - | chr4.1:89348330-89348349 | MS.gene98127:CDS | 45.0% | |
| GGTCTTACTTTGTCTGACGA+AGG | - | chr4.1:89346747-89346766 | MS.gene98127:intron | 45.0% | |
| GGTTACGATCACCAAATCTG+TGG | - | chr4.1:89346911-89346930 | MS.gene98127:CDS | 45.0% | |
| GGTTCCGTTCTCTAGGTTAA+GGG | + | chr4.1:89346778-89346797 | None:intergenic | 45.0% | |
| GTAAACCAAGTACCACTGGA+CGG | + | chr4.1:89347748-89347767 | None:intergenic | 45.0% | |
| TAATACCCAGTAACTCGCCA+AGG | + | chr4.1:89348318-89348337 | None:intergenic | 45.0% | |
| TACCTTCAGCAGTTGAGTCA+CGG | + | chr4.1:89347535-89347554 | None:intergenic | 45.0% | |
| TAGTAAGTAGGCCGAAGCTT+AGG | + | chr4.1:89348720-89348739 | None:intergenic | 45.0% | |
| TCCCCCCCATTACTAACATT+TGG | + | chr4.1:89347914-89347933 | None:intergenic | 45.0% | |
| TCTCAAACCGGTGTCTCAAA+GGG | - | chr4.1:89347418-89347437 | MS.gene98127:intron | 45.0% | |
| TGAGACGCATATAGGAACTG+TGG | + | chr4.1:89347196-89347215 | None:intergenic | 45.0% | |
| TGCAATGCTCTCCTAAGCTT+CGG | - | chr4.1:89348706-89348725 | MS.gene98127:CDS | 45.0% | |
| TGCAGCTTCGAATATACTCC+AGG | - | chr4.1:89347721-89347740 | MS.gene98127:intron | 45.0% | |
| TGGCGAGTTACTGGGTATTA+TGG | - | chr4.1:89348318-89348337 | MS.gene98127:CDS | 45.0% | |
| TGTCCCAAGACGATGCATAT+TGG | - | chr4.1:89349013-89349032 | MS.gene98127:CDS | 45.0% | |
| TTAAGGTCGGGAATTGCACT+CGG | + | chr4.1:89348063-89348082 | None:intergenic | 45.0% | |
| TTAGATGCAAGTGAGAAGCG+GGG | - | chr4.1:89348444-89348463 | MS.gene98127:CDS | 45.0% | |
| TTCCTATATGCGTCTCAAGG+TGG | - | chr4.1:89347199-89347218 | MS.gene98127:intron | 45.0% | |
| TTTCACGATCAGCTAGCACA+CGG | + | chr4.1:89346836-89346855 | None:intergenic | 45.0% | |
| ! | AGTGCCGAACTAGGTACTTA+AGG | + | chr4.1:89348080-89348099 | None:intergenic | 45.0% |
| ! | CAAGGTTCTGGTGAAGAACA+AGG | - | chr4.1:89348952-89348971 | MS.gene98127:CDS | 45.0% |
| !! | AGGTCCTTGGTGCATTTTTG+GGG | - | chr4.1:89348407-89348426 | MS.gene98127:CDS | 45.0% |
| !! | CAAAAGCACCATTGCTAGCA+CGG | + | chr4.1:89347265-89347284 | None:intergenic | 45.0% |
| !! | CAGGTCCTTGGTGCATTTTT+GGG | - | chr4.1:89348406-89348425 | MS.gene98127:CDS | 45.0% |
| !! | CGATGATGGAGTTCGTAACT+GGG | - | chr4.1:89347388-89347407 | MS.gene98127:intron | 45.0% |
| !! | GATGATGGAGTTCGTAACTG+GGG | - | chr4.1:89347389-89347408 | MS.gene98127:intron | 45.0% |
| !! | TGAGACACCGGTTTGAGATA+CGG | + | chr4.1:89347416-89347435 | None:intergenic | 45.0% |
| !! | TTCTAAGACAGCTGCGGTTT+CGG | + | chr4.1:89346799-89346818 | None:intergenic | 45.0% |
| !!! | ACGCGCCAGTCTTTTTTCAA+AGG | + | chr4.1:89347242-89347261 | None:intergenic | 45.0% |
| AAACCGGTGTCTCAAAGGGT+TGG | - | chr4.1:89347422-89347441 | MS.gene98127:intron | 50.0% | |
| AAAGCCATGGACCTTCCTCA+AGG | + | chr4.1:89346986-89347005 | None:intergenic | 50.0% | |
| AACCTTTATTCCACCGCACG+TGG | + | chr4.1:89348588-89348607 | None:intergenic | 50.0% | |
| AATGCTTGGCACTTGGAACC+GGG | - | chr4.1:89348762-89348781 | MS.gene98127:CDS | 50.0% | |
| ACCGTCAAGGTTGAGGTTTG+TGG | + | chr4.1:89346730-89346749 | None:intergenic | 50.0% | |
| AGGCCTCCTTGGCTCATTAA+TGG | - | chr4.1:89348477-89348496 | MS.gene98127:CDS | 50.0% | |
| ATCGGCAACGGCAAGGAAAA+AGG | - | chr4.1:89349098-89349117 | MS.gene98127:CDS | 50.0% | |
| ATGCAAGAGATACGGCTGCA+AGG | - | chr4.1:89348934-89348953 | MS.gene98127:CDS | 50.0% | |
| ATTAATGAGCCAAGGAGGCC+TGG | + | chr4.1:89348478-89348497 | None:intergenic | 50.0% | |
| CCCACAAACCTCAACCTTGA+CGG | - | chr4.1:89346726-89346745 | MS.gene98127:intron | 50.0% | |
| CCGTCAAGGTTGAGGTTTGT+GGG | + | chr4.1:89346729-89346748 | None:intergenic | 50.0% | |
| CCTAGTTCGGCACTTCAATC+CGG | - | chr4.1:89348086-89348105 | MS.gene98127:CDS | 50.0% | |
| CGGTTCCGTTCTCTAGGTTA+AGG | + | chr4.1:89346779-89346798 | None:intergenic | 50.0% | |
| GACGCCAATATGCATCGTCT+TGG | + | chr4.1:89349020-89349039 | None:intergenic | 50.0% | |
| GCAGGTAAACCAAGTACCAC+TGG | + | chr4.1:89347752-89347771 | None:intergenic | 50.0% | |
| GCAGTGCCTGAAGAAGAAGA+GGG | + | chr4.1:89347704-89347723 | None:intergenic | 50.0% | |
| GGTATATGAGTCTAGTGGCG+TGG | - | chr4.1:89348016-89348035 | MS.gene98127:CDS | 50.0% | |
| GTAGCGATCAGCCACAGATT+TGG | + | chr4.1:89346925-89346944 | None:intergenic | 50.0% | |
| GTCAGCGCGCAAAAACTCAT+TGG | - | chr4.1:89349037-89349056 | MS.gene98127:CDS | 50.0% | |
| GTCTAGTGGCGTGGAATTGT+CGG | - | chr4.1:89348025-89348044 | MS.gene98127:CDS | 50.0% | |
| GTGAACGGATACCCTTCGAA+AGG | + | chr4.1:89348543-89348562 | None:intergenic | 50.0% | |
| GTTATGGATCGTATCTCCCC+TGG | - | chr4.1:89347023-89347042 | MS.gene98127:intron | 50.0% | |
| TAAGGTCGGGAATTGCACTC+GGG | + | chr4.1:89348062-89348081 | None:intergenic | 50.0% | |
| TAGATGCAAGTGAGAAGCGG+GGG | - | chr4.1:89348445-89348464 | MS.gene98127:CDS | 50.0% | |
| TCCAAAGTTGTCGTCATGCG+CGG | - | chr4.1:89348839-89348858 | MS.gene98127:CDS | 50.0% | |
| TCTAGTGGCGTGGAATTGTC+GGG | - | chr4.1:89348026-89348045 | MS.gene98127:CDS | 50.0% | |
| TGCAGTGCCTGAAGAAGAAG+AGG | + | chr4.1:89347705-89347724 | None:intergenic | 50.0% | |
| TGTCACAGGTGTGGAGTTCT+TGG | - | chr4.1:89347323-89347342 | MS.gene98127:intron | 50.0% | |
| TGTGTTCATGTAGACCGCAC+CGG | - | chr4.1:89348186-89348205 | MS.gene98127:CDS | 50.0% | |
| TTCGAGCTAGAGTCCGATGA+TGG | - | chr4.1:89347374-89347393 | MS.gene98127:intron | 50.0% | |
| TTGCTGCCCTCTTCTTCTTC+AGG | - | chr4.1:89347695-89347714 | MS.gene98127:intron | 50.0% | |
| TTGGTCCTTGGCGAGTTACT+GGG | - | chr4.1:89348310-89348329 | MS.gene98127:CDS | 50.0% | |
| ! | GACTCAACTGCTGAAGGTAC+AGG | - | chr4.1:89347536-89347555 | MS.gene98127:intron | 50.0% |
| ! | GACTCTAGCTCGAACAAGTC+AGG | + | chr4.1:89347368-89347387 | None:intergenic | 50.0% |
| ! | GCACTTGGAACCGGGTTTTA+CGG | - | chr4.1:89348770-89348789 | MS.gene98127:CDS | 50.0% |
| ! | GGTGTGTTTTGTCACAGGTG+TGG | - | chr4.1:89347314-89347333 | MS.gene98127:intron | 50.0% |
| !! | CCGATGATGGAGTTCGTAAC+TGG | - | chr4.1:89347387-89347406 | MS.gene98127:intron | 50.0% |
| !! | GCAGGTCCTTGGTGCATTTT+TGG | - | chr4.1:89348405-89348424 | MS.gene98127:CDS | 50.0% |
| !! | GTTCCAACCCTTTGAGACAC+CGG | + | chr4.1:89347428-89347447 | None:intergenic | 50.0% |
| !! | TCGAAGGGTATCCGTTCACA+TGG | - | chr4.1:89348544-89348563 | MS.gene98127:CDS | 50.0% |
| !!! | GAGTTTTGGGTCCAGGTTCA+TGG | - | chr4.1:89347080-89347099 | MS.gene98127:CDS | 50.0% |
| !!! | GCGGGGGTCTTGCTTTATTT+TGG | - | chr4.1:89348214-89348233 | MS.gene98127:CDS | 50.0% |
| !!! | TCACATCGAGTTTTGGGTCC+AGG | - | chr4.1:89347073-89347092 | MS.gene98127:CDS | 50.0% |
| AAAGTTGTCGTCATGCGCGG+AGG | - | chr4.1:89348842-89348861 | MS.gene98127:CDS | 55.0% | |
| CACCACGTGCGGTGGAATAA+AGG | - | chr4.1:89348583-89348602 | MS.gene98127:CDS | 55.0% | |
| CGGTTTCGGTTCCGTTCTCT+AGG | + | chr4.1:89346785-89346804 | None:intergenic | 55.0% | |
| CGTATGCTGGCCCTTCAGAA+TGG | - | chr4.1:89347842-89347861 | MS.gene98127:intron | 55.0% | |
| CTAGTGGCGTGGAATTGTCG+GGG | - | chr4.1:89348027-89348046 | MS.gene98127:CDS | 55.0% | |
| CTGGGGACCGTATCTCAAAC+CGG | - | chr4.1:89347406-89347425 | MS.gene98127:intron | 55.0% | |
| CTTGGTCCTTGGCGAGTTAC+TGG | - | chr4.1:89348309-89348328 | MS.gene98127:CDS | 55.0% | |
| GAACTGCTGCCACCAATCGT+TGG | - | chr4.1:89347444-89347463 | MS.gene98127:intron | 55.0% | |
| GAGATACGGCTGCAAGGTTC+TGG | - | chr4.1:89348940-89348959 | MS.gene98127:CDS | 55.0% | |
| GCAATTCGACGGCCACCATT+CGG | + | chr4.1:89348348-89348367 | None:intergenic | 55.0% | |
| GCCATGCCAACACATGCTCA+CGG | - | chr4.1:89347488-89347507 | MS.gene98127:intron | 55.0% | |
| GCTACTCGTGTCCTTGAGGA+AGG | - | chr4.1:89346972-89346991 | MS.gene98127:intron | 55.0% | |
| GCTCGCTGAAATAGGCGAGT+TGG | + | chr4.1:89346860-89346879 | None:intergenic | 55.0% | |
| GGATGCTACTCGTGTCCTTG+AGG | - | chr4.1:89346968-89346987 | MS.gene98127:intron | 55.0% | |
| GGCCACCTTGAGACGCATAT+AGG | + | chr4.1:89347204-89347223 | None:intergenic | 55.0% | |
| GGGCAGCAAGTGTACTTTGC+AGG | + | chr4.1:89347684-89347703 | None:intergenic | 55.0% | |
| GTGATCGTAACCCTCTTGCC+TGG | + | chr4.1:89346903-89346922 | None:intergenic | 55.0% | |
| GTGTCCTTGAGGAAGGTCCA+TGG | - | chr4.1:89346979-89346998 | MS.gene98127:intron | 55.0% | |
| GTTGGCATGGCAGCAGGAAT+GGG | + | chr4.1:89347479-89347498 | None:intergenic | 55.0% | |
| TATACTCCAGGACCGTCCAG+TGG | - | chr4.1:89347733-89347752 | MS.gene98127:intron | 55.0% | |
| TCCGCGCATGACGACAACTT+TGG | + | chr4.1:89348843-89348862 | None:intergenic | 55.0% | |
| TGTTGGCATGGCAGCAGGAA+TGG | + | chr4.1:89347480-89347499 | None:intergenic | 55.0% | |
| ! | AAGGTTTGGGACAGCACCAG+GGG | + | chr4.1:89347042-89347061 | None:intergenic | 55.0% |
| ! | ACAAGGTTTGGGACAGCACC+AGG | + | chr4.1:89347044-89347063 | None:intergenic | 55.0% |
| ! | ACCGTGAGCATGTGTTGGCA+TGG | + | chr4.1:89347492-89347511 | None:intergenic | 55.0% |
| ! | CAAGGTTTGGGACAGCACCA+GGG | + | chr4.1:89347043-89347062 | None:intergenic | 55.0% |
| ! | TTCATGCATCGGCAACGGCA+AGG | - | chr4.1:89349091-89349110 | MS.gene98127:CDS | 55.0% |
| !! | CCGGATTGAAGTGCCGAACT+AGG | + | chr4.1:89348089-89348108 | None:intergenic | 55.0% |
| AACGGCAGGCCATGCTGATG+AGG | - | chr4.1:89347985-89348004 | MS.gene98127:CDS | 60.0% | |
| AATGAGCCAAGGAGGCCTGG+TGG | + | chr4.1:89348475-89348494 | None:intergenic | 60.0% | |
| ATGTCTCGCGCTTGGAAGCC+AGG | - | chr4.1:89346882-89346901 | MS.gene98127:CDS | 60.0% | |
| CAAGTACCACTGGACGGTCC+TGG | + | chr4.1:89347742-89347761 | None:intergenic | 60.0% | |
| CAGGACCGTCCAGTGGTACT+TGG | - | chr4.1:89347740-89347759 | MS.gene98127:intron | 60.0% | |
| CATGCTGATGAGGCCTGCCT+AGG | - | chr4.1:89347995-89348014 | MS.gene98127:CDS | 60.0% | |
| CGCTTGGAAGCCAGGCAAGA+GGG | - | chr4.1:89346890-89346909 | MS.gene98127:CDS | 60.0% | |
| CTAGGCAGGCCTCATCAGCA+TGG | + | chr4.1:89347997-89348016 | None:intergenic | 60.0% | |
| GAGTCTTGGCACACCACGTG+CGG | - | chr4.1:89348572-89348591 | MS.gene98127:CDS | 60.0% | |
| GCACTAGGAAATGGGGCAGC+AGG | + | chr4.1:89347770-89347789 | None:intergenic | 60.0% | |
| GCAGCACCGTGAGCATGTGT+TGG | + | chr4.1:89347497-89347516 | None:intergenic | 60.0% | |
| GCGCGGAGGACATGACTATC+TGG | - | chr4.1:89348856-89348875 | MS.gene98127:CDS | 60.0% | |
| GCGTGGAATTGTCGGGGTGT+AGG | - | chr4.1:89348033-89348052 | MS.gene98127:CDS | 60.0% | |
| GGCCGTGACTCAACTGCTGA+AGG | - | chr4.1:89347530-89347549 | MS.gene98127:intron | 60.0% | |
| GTGGCCGTCGAATTGCTGCT+TGG | - | chr4.1:89348352-89348371 | MS.gene98127:CDS | 60.0% | |
| ! | GCATGTGTTGGCATGGCAGC+AGG | + | chr4.1:89347485-89347504 | None:intergenic | 60.0% |
| !! | GGTGCTGCTGCTGTTCCTGT+CGG | - | chr4.1:89347509-89347528 | MS.gene98127:intron | 60.0% |
| GCAGTTGAGTCACGGCCGAC+AGG | + | chr4.1:89347527-89347546 | None:intergenic | 65.0% | |
| GCGAGCGTATGTCTCGCGCT+TGG | - | chr4.1:89346874-89346893 | MS.gene98127:CDS | 65.0% | |
| GCGCTTGGAAGCCAGGCAAG+AGG | - | chr4.1:89346889-89346908 | MS.gene98127:CDS | 65.0% | |
| TCTTGGCACACCACGTGCGG+TGG | - | chr4.1:89348575-89348594 | MS.gene98127:CDS | 65.0% | |
| TGGCGCGTCCGTGCTAGCAA+TGG | - | chr4.1:89347254-89347273 | MS.gene98127:intron | 65.0% | |
| ! | CATGTAGACCGCACCGGCAG+AGG | - | chr4.1:89348192-89348211 | MS.gene98127:CDS | 65.0% |
| AGCAAGACCCCCGCCTCTGC+CGG | + | chr4.1:89348208-89348227 | None:intergenic | 70.0% | |
| ! | GTAGACCGCACCGGCAGAGG+CGG | - | chr4.1:89348195-89348214 | MS.gene98127:CDS | 70.0% |
| ! | TAGACCGCACCGGCAGAGGC+GGG | - | chr4.1:89348196-89348215 | MS.gene98127:CDS | 70.0% |
| GGCGCACCACCAGGCCTCCT+TGG | - | chr4.1:89348466-89348485 | MS.gene98127:CDS | 75.0% | |
| ! | AGAAGCGGGGGCGCACCACC+AGG | - | chr4.1:89348457-89348476 | MS.gene98127:CDS | 75.0% |
| ! | AGACCGCACCGGCAGAGGCG+GGG | - | chr4.1:89348197-89348216 | MS.gene98127:CDS | 75.0% |
| ! | GACCCCCGCCTCTGCCGGTG+CGG | + | chr4.1:89348203-89348222 | None:intergenic | 80.0% |
| !! | GACCGCACCGGCAGAGGCGG+GGG | - | chr4.1:89348198-89348217 | MS.gene98127:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 89346720 | 89349157 | 89346720 | ID=MS.gene98127 |
| chr4.1 | mRNA | 89346720 | 89349157 | 89346720 | ID=MS.gene98127.t1;Parent=MS.gene98127 |
| chr4.1 | exon | 89347895 | 89349157 | 89347895 | ID=MS.gene98127.t1.exon1;Parent=MS.gene98127.t1 |
| chr4.1 | CDS | 89347895 | 89349157 | 89347895 | ID=cds.MS.gene98127.t1;Parent=MS.gene98127.t1 |
| chr4.1 | exon | 89347062 | 89347154 | 89347062 | ID=MS.gene98127.t1.exon2;Parent=MS.gene98127.t1 |
| chr4.1 | CDS | 89347062 | 89347154 | 89347062 | ID=cds.MS.gene98127.t1;Parent=MS.gene98127.t1 |
| chr4.1 | exon | 89346819 | 89346970 | 89346819 | ID=MS.gene98127.t1.exon3;Parent=MS.gene98127.t1 |
| chr4.1 | CDS | 89346819 | 89346970 | 89346819 | ID=cds.MS.gene98127.t1;Parent=MS.gene98127.t1 |
| chr4.1 | exon | 89346720 | 89346723 | 89346720 | ID=MS.gene98127.t1.exon4;Parent=MS.gene98127.t1 |
| chr4.1 | CDS | 89346720 | 89346723 | 89346720 | ID=cds.MS.gene98127.t1;Parent=MS.gene98127.t1 |
| Gene Sequence |
| Protein sequence |
