AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene96163

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96163.t1 MTR_6g033215 43.243 148 84 0 234 381 147 294 2.44e-40 150
MS.gene96163.t1 MTR_0010s0370 35.821 134 86 0 227 360 45 178 4.32e-26 106
MS.gene96163.t1 MTR_0010s0350 35.821 134 86 0 227 360 45 178 4.32e-26 106
MS.gene96163.t1 MTR_3g024240 38.843 121 72 1 264 382 55 175 1.21e-21 93.6
MS.gene96163.t1 MTR_6g053230 44.828 87 48 0 283 369 84 170 1.65e-20 95.9
MS.gene96163.t1 MTR_8g468010 54.688 64 29 0 297 360 1 64 8.67e-20 86.7
MS.gene96163.t1 MTR_1g032270 46.377 69 37 0 281 349 2 70 1.24e-16 77.8
MS.gene96163.t1 MTR_4g020545 28.293 205 91 7 243 447 79 227 7.62e-16 79.3
MS.gene96163.t1 MTR_4g103530 32.584 89 60 0 239 327 5 93 1.26e-13 70.5
MS.gene96163.t1 MTR_3g053920 30.172 116 64 2 234 349 54 152 1.76e-13 72.0
MS.gene96163.t1 MTR_6g053790 28.743 167 93 3 318 482 35 177 1.18e-12 70.1
MS.gene96163.t1 MTR_7g089990 32.743 113 74 1 286 396 86 198 5.47e-12 66.2
MS.gene96163.t1 MTR_7g011710 28.571 112 79 1 235 345 1 112 8.37e-12 64.3
MS.gene96163.t1 MTR_2g061500 31.579 76 52 0 234 309 54 129 1.89e-11 62.8
MS.gene96163.t1 MTR_4g075740 34.426 61 40 0 237 297 60 120 4.11e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96163.t1 AT3G31430 25.150 167 121 1 231 397 149 311 4.28e-15 77.8
MS.gene96163.t1 AT2G17920 22.222 171 131 1 230 400 53 221 1.12e-14 75.9
MS.gene96163.t1 AT5G36228 20.444 225 169 4 174 398 5 219 7.65e-13 71.2
MS.gene96163.t1 AT3G57587 24.359 156 111 3 245 400 73 221 1.31e-12 70.5
MS.gene96163.t1 AT2G41590 24.359 156 111 3 245 400 73 221 3.84e-12 68.9
MS.gene96163.t1 AT2G02103 21.765 170 131 1 231 400 54 221 5.87e-12 68.6
MS.gene96163.t1 AT5G18636 21.765 170 131 1 231 400 54 221 5.97e-12 68.6
MS.gene96163.t1 AT5G25200 21.765 170 131 1 231 400 54 221 7.40e-12 68.2
MS.gene96163.t1 AT2G01050 24.706 170 123 1 230 399 94 258 1.03e-11 68.6
MS.gene96163.t1 AT3G47920 23.077 156 113 3 245 400 2 150 9.50e-11 63.9

Find 164 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACCTTCCCTTTGGATTTA+TGG 0.091451 8.4:+56451346 MS.gene96163:CDS
TGAGTCAACTTTCAGCTTTA+TGG 0.195569 8.4:+56450457 MS.gene96163:CDS
AAATCCTGCTTCAAACCTTT+TGG 0.227187 8.4:-56451618 None:intergenic
AAACTTGGTCCCCACTTCTT+TGG 0.234774 8.4:-56451650 None:intergenic
TGAATCAATGGGCCATCTTT+TGG 0.241007 8.4:+56451370 MS.gene96163:CDS
ATGCACCAACCTTGCAATTC+TGG 0.253069 8.4:-56452032 None:intergenic
GAATCTGTTATTCTCAATTA+AGG 0.263228 8.4:-56451168 None:intergenic
TACTTTCACAAAGGCATTAC+AGG 0.281038 8.4:+56450272 MS.gene96163:CDS
CCTGATCGAAGAACTGAAAA+AGG 0.286955 8.4:-56451190 None:intergenic
CCTGCTAGTTGGAGTATGTT+TGG 0.295807 8.4:-56451962 None:intergenic
CTTGTTCTTCCTTACATATA+TGG 0.299352 8.4:-56450094 None:intergenic
CTGCTAGTTGGAGTATGTTT+GGG 0.299435 8.4:-56451961 None:intergenic
CAGCGGTTCATTAACATTCA+TGG 0.313511 8.4:-56451474 None:intergenic
GGCAATTTCTGCTATATTTG+TGG 0.316929 8.4:+56451566 MS.gene96163:CDS
TTCTGAAGTGCGTGCTGAAC+AGG 0.318069 8.4:+56451997 MS.gene96163:CDS
AGAAATTCATTGAAATACTT+TGG 0.321627 8.4:+56450054 MS.gene96163:CDS
GAATCTCCATAGTTTGTATT+GGG 0.345222 8.4:-56452072 None:intergenic
CGAAGCCGGGTTGATGATTC+AGG 0.346012 8.4:+56452229 MS.gene96163:CDS
AAGTATGGAGGTTGGGTTGT+AGG 0.346823 8.4:+56450114 MS.gene96163:CDS
GAAATTCATTGAAATACTTT+GGG 0.352952 8.4:+56450055 MS.gene96163:CDS
GAAGAACCCAATACAAACTA+TGG 0.355495 8.4:+56452066 MS.gene96163:CDS
GGCAATTTAATGCTGTCTAA+TGG 0.361003 8.4:+56450414 MS.gene96163:CDS
GGAATCTCCATAGTTTGTAT+TGG 0.361049 8.4:-56452073 None:intergenic
TGGATTTATGGCTGAATCAA+TGG 0.361540 8.4:+56451358 MS.gene96163:CDS
TAACATTCATGGTGACTCTA+AGG 0.362744 8.4:-56451463 None:intergenic
AGTCCTTCACATACCAGATT+TGG 0.364610 8.4:+56450312 MS.gene96163:CDS
TGCACTTGTTGCTTAAAATC+AGG 0.369103 8.4:-56453161 None:intergenic
GTTGCATCCATTTGTTTGTC+AGG 0.369149 8.4:-56451146 None:intergenic
ATGATGAGTACAAGTCAATA+TGG 0.384229 8.4:+56450217 MS.gene96163:CDS
TGAAATTCAGCTTTCAAACT+TGG 0.387896 8.4:-56451665 None:intergenic
TGATATTTGCAAAATACATT+GGG 0.388096 8.4:+56451843 MS.gene96163:CDS
CAAGCTCATAACCTTCCCTT+TGG 0.389306 8.4:+56451338 MS.gene96163:CDS
TGAACCGCTGAAGCAGTGTT+TGG 0.391576 8.4:+56451487 MS.gene96163:CDS
CAAGAAGTTAATGCAATCTC+TGG 0.393147 8.4:+56450597 MS.gene96163:CDS
ATGCAGAATTGCACCAAATC+TGG 0.393872 8.4:-56450325 None:intergenic
CTTAATTAACTGTCAACCTA+TGG 0.398032 8.4:+56452135 MS.gene96163:CDS
TTTAGTTGTGAATCATGTAT+AGG 0.401995 8.4:-56450552 None:intergenic
GGATTTATGGCTGAATCAAT+GGG 0.406115 8.4:+56451359 MS.gene96163:CDS
GTTCTTCGATCAGGGAGAAA+TGG 0.407110 8.4:+56451199 MS.gene96163:CDS
CAACATGGTTTCCCAAAAGA+TGG 0.407361 8.4:-56451382 None:intergenic
GTCAACCTATGGGGCAGGTT+AGG 0.410767 8.4:+56452146 MS.gene96163:CDS
TGTAAAATTAGCATGGAGAT+TGG 0.415521 8.4:+56449943 None:intergenic
GTTCTCCCGTTCCTGCTAGT+TGG 0.422520 8.4:-56451973 None:intergenic
TGCTATATTTGTGGATTGCT+AGG 0.423399 8.4:+56451575 MS.gene96163:CDS
GCAGCTTTCTTGACAAGTAA+AGG 0.425461 8.4:+56450393 MS.gene96163:CDS
CATGAAATCAAAGGCGCAAA+AGG 0.427061 8.4:+56450357 MS.gene96163:CDS
GTAATAATAGATTGCTTCCC+AGG 0.431581 8.4:-56450030 None:intergenic
CTGCTACGCAAGCTTCAGTT+TGG 0.436016 8.4:+56451269 MS.gene96163:CDS
GAAACAGACTTGCACATCTC+TGG 0.440343 8.4:+56451120 MS.gene96163:intron
TTTCTTGTCTTCTCAGCCAA+GGG 0.445099 8.4:-56451718 None:intergenic
GTTTCTTGTCTTCTCAGCCA+AGG 0.446271 8.4:-56451719 None:intergenic
TTTGAAGCAGGATTTATTGA+AGG 0.454754 8.4:+56451626 MS.gene96163:CDS
TAAAACAGCTGAAGCGAAGC+CGG 0.457929 8.4:+56452215 MS.gene96163:CDS
TATGTAAGGAAGAACAAGTA+TGG 0.458517 8.4:+56450099 MS.gene96163:CDS
GAAGAACAAGTATGGAGGTT+GGG 0.459072 8.4:+56450107 MS.gene96163:CDS
TGAAGCTTGCGTAGCAGCAT+AGG 0.460732 8.4:-56451263 None:intergenic
TTAATTAACTGTCAACCTAT+GGG 0.462187 8.4:+56452136 MS.gene96163:CDS
AAAACAGCTGAAGCGAAGCC+GGG 0.462216 8.4:+56452216 MS.gene96163:CDS
GAATATAGAGCAAGGGAGGA+GGG 0.462737 8.4:+56450500 MS.gene96163:CDS
CTGATATTTGCAAAATACAT+TGG 0.466883 8.4:+56451842 MS.gene96163:CDS
GGAATATAGAGCAAGGGAGG+AGG 0.467200 8.4:+56450499 MS.gene96163:CDS
CTGGCAGCCTGACAAACAAA+TGG 0.469258 8.4:+56451139 MS.gene96163:CDS
AGTTGGAGTATGTTTGGGCC+TGG 0.478705 8.4:-56451956 None:intergenic
GTGAACACTCCTCCTTCTTG+AGG 0.480167 8.4:-56451692 None:intergenic
CTCTGGATGGCAGACTGAAA+AGG 0.480488 8.4:+56450614 MS.gene96163:CDS
GGCATGTGTGTATTATGTTA+AGG 0.482708 8.4:+56450478 MS.gene96163:CDS
CACAAAACAGCAGCAATGAA+TGG 0.483837 8.4:+56451867 MS.gene96163:CDS
AGGGTAACTGTCAAAATGCC+AGG 0.484585 8.4:-56451243 None:intergenic
TACATAAGATATTTCATCCT+GGG 0.485070 8.4:+56450013 MS.gene96163:CDS
CTATCGACACGATGGACATA+TGG 0.486609 8.4:+56451312 MS.gene96163:CDS
TGACTTGTACTCATCATAGT+TGG 0.491139 8.4:-56450211 None:intergenic
AGCAGTGTTTGGAATTTGAA+AGG 0.492894 8.4:+56451498 MS.gene96163:CDS
GGAAGAACAAGTATGGAGGT+TGG 0.494054 8.4:+56450106 MS.gene96163:CDS
ATTGTGGCTCACTTGCAAAT+CGG 0.495119 8.4:+56453079 MS.gene96163:CDS
AGCAACAAGTGCAGCAACGC+TGG 0.496058 8.4:+56453171 MS.gene96163:CDS
ATACTCCAACTAGCAGGAAC+GGG 0.496717 8.4:+56451968 MS.gene96163:CDS
TGGCTGAGAAGACAAGAAAC+AGG 0.499911 8.4:+56451722 MS.gene96163:CDS
TGCCCCAAAAGGTTTGAAGC+AGG 0.503127 8.4:+56451614 MS.gene96163:CDS
AGTTTGAAAGCTGAATTTCA+AGG 0.505996 8.4:+56451668 MS.gene96163:CDS
GATGCTGTTCAGACAAACAT+AGG 0.507036 8.4:+56452277 MS.gene96163:CDS
TTAACAACAATTATGGTACA+TGG 0.508600 8.4:+56451426 MS.gene96163:CDS
TCAGTGCAGATTTCAATGCT+TGG 0.509237 8.4:+56451906 MS.gene96163:CDS
GAAGTCGCTGCTGCTGAACC+AGG 0.509563 8.4:+56451938 MS.gene96163:CDS
AGCAAGGGAGGAGGGAGAGA+AGG 0.511896 8.4:+56450508 MS.gene96163:CDS
AGGTTGACAGTTAATTAAGC+TGG 0.511904 8.4:-56452131 None:intergenic
GTTGGGTTGTAGGAGGCGTA+TGG 0.518171 8.4:+56450124 MS.gene96163:CDS
AGTCTTGTGCCATATATGTA+AGG 0.519731 8.4:+56450085 MS.gene96163:CDS
GAGATTGGAAGAAGGAGTGC+AGG 0.522017 8.4:+56449958 MS.gene96163:CDS
GCTTTAAGTTTGAAAATGCA+TGG 0.524766 8.4:+56453129 MS.gene96163:CDS
AAATCAAAGGCGCAAAAGGA+GGG 0.526373 8.4:+56450361 MS.gene96163:CDS
TAAGGAATATAGAGCAAGGG+AGG 0.527019 8.4:+56450496 MS.gene96163:CDS
GTTGGTATTGAAAATACGTA+TGG 0.527646 8.4:-56450193 None:intergenic
CATTGAAATCTGCACTGAAA+GGG 0.528617 8.4:-56451901 None:intergenic
TGCTGAACAGGAAGAGGATG+AGG 0.535578 8.4:+56452009 MS.gene96163:CDS
AAAATAAGCACAAAAGATGA+TGG 0.536135 8.4:+56452190 MS.gene96163:CDS
TGAGGCCAGAATTGCAAGGT+TGG 0.537810 8.4:+56452027 MS.gene96163:CDS
GCATTGAAATCTGCACTGAA+AGG 0.538168 8.4:-56451902 None:intergenic
ATGTTAAGGAATATAGAGCA+AGG 0.538367 8.4:+56450492 MS.gene96163:CDS
GTAAGATTCATAGTCGAGTC+GGG 0.538534 8.4:+56451783 MS.gene96163:CDS
GTTGTGAATCATGTATAGGA+AGG 0.539048 8.4:-56450548 None:intergenic
GCAGTGTTTGGAATTTGAAA+GGG 0.541766 8.4:+56451499 MS.gene96163:CDS
ATTTGCAAGTGAGCCACAAT+GGG 0.543382 8.4:-56453076 None:intergenic
CGAGTCGGGAAAGTCAAGAT+TGG 0.546021 8.4:+56451797 MS.gene96163:CDS
GTGCACAAAGGCAGAAAGGT+GGG 0.548581 8.4:+56451744 MS.gene96163:CDS
TTTCAATGCTTGGCCAGTCG+TGG 0.548634 8.4:+56451916 MS.gene96163:CDS
AGTATATGTTTCATACATGA+AGG 0.549930 8.4:-56450160 None:intergenic
AATTCCAAACACTGCTTCAG+CGG 0.549989 8.4:-56451491 None:intergenic
TGTTCAGCACGCACTTCAGA+AGG 0.551176 8.4:-56451995 None:intergenic
GAAATCAAAGGCGCAAAAGG+AGG 0.554447 8.4:+56450360 MS.gene96163:CDS
TAACTGTCAACCTATGGGGC+AGG 0.558351 8.4:+56452141 MS.gene96163:CDS
CTATGAATCTTACTGCAAGC+TGG 0.562630 8.4:-56451773 None:intergenic
TGATGATTCAGGTGCTGAAG+TGG 0.564104 8.4:+56452240 MS.gene96163:CDS
GCAGCAGCGACTTCCACGAC+TGG 0.564108 8.4:-56451929 None:intergenic
TTAGCATGGAGATTGGAAGA+AGG 0.565027 8.4:+56449950 None:intergenic
ATACATAAGATATTTCATCC+TGG 0.566938 8.4:+56450012 MS.gene96163:CDS
TGGAAGCTCTATCCTGAAGA+AGG 0.567863 8.4:+56453191 MS.gene96163:CDS
GAGGAGTGTTCACAAACCCT+TGG 0.569233 8.4:+56451702 MS.gene96163:CDS
CCAAACATACTCCAACTAGC+AGG 0.572980 8.4:+56451962 MS.gene96163:CDS
GGGAGAGAAGGCGTTACAGA+AGG 0.573171 8.4:+56450520 MS.gene96163:CDS
GTCATCCTAACCTGCCCCAT+AGG 0.574858 8.4:-56452151 None:intergenic
GAAGCTTGCGTAGCAGCATA+GGG 0.575697 8.4:-56451262 None:intergenic
GATTCAGCCATAAATCCAAA+GGG 0.575920 8.4:-56451353 None:intergenic
TATTGAAGGACCAAAGAAGT+GGG 0.576064 8.4:+56451640 MS.gene96163:CDS
GAATTTCAAGGTCCTCAAGA+AGG 0.576802 8.4:+56451680 MS.gene96163:CDS
CATACTCCAACTAGCAGGAA+CGG 0.578568 8.4:+56451967 MS.gene96163:CDS
TGGAACAGAAATGTTGCTGC+TGG 0.579678 8.4:+56450434 MS.gene96163:CDS
AGTAAGATTCATAGTCGAGT+CGG 0.579741 8.4:+56451782 MS.gene96163:CDS
CATATGTCCATCGTGTCGAT+AGG 0.586167 8.4:-56451311 None:intergenic
GGGTTGTAGGAGGCGTATGG+TGG 0.588350 8.4:+56450127 MS.gene96163:CDS
TTTGTGAAAGTACAACTGAC+AGG 0.588543 8.4:-56450261 None:intergenic
TGATTCAGCCATAAATCCAA+AGG 0.590016 8.4:-56451354 None:intergenic
ACAGGTGCACAAAGGCAGAA+AGG 0.593427 8.4:+56451740 MS.gene96163:CDS
CTTCTGATCATTACCCATTG+TGG 0.595526 8.4:+56453063 MS.gene96163:CDS
GACAAGAAACAGGTGCACAA+AGG 0.599195 8.4:+56451732 MS.gene96163:CDS
GATTTGCAAGTGAGCCACAA+TGG 0.600467 8.4:-56453077 None:intergenic
TATGGAGGTTGGGTTGTAGG+AGG 0.600672 8.4:+56450117 MS.gene96163:CDS
TGTTAAGGAATATAGAGCAA+GGG 0.602840 8.4:+56450493 MS.gene96163:CDS
CTGTACTACCATGAAATCAA+AGG 0.603441 8.4:+56450348 MS.gene96163:CDS
CAGCCATAAATCCAAAGGGA+AGG 0.605523 8.4:-56451349 None:intergenic
AATCAAAGGCGCAAAAGGAG+GGG 0.609854 8.4:+56450362 MS.gene96163:CDS
TTATTGAAGGACCAAAGAAG+TGG 0.610496 8.4:+56451639 MS.gene96163:CDS
GATCAGAAGATGTCGTCGAA+AGG 0.615542 8.4:-56453049 None:intergenic
CACTATGCCTATCGACACGA+TGG 0.617217 8.4:+56451304 MS.gene96163:CDS
AGTGCGTGCTGAACAGGAAG+AGG 0.618430 8.4:+56452003 MS.gene96163:CDS
TGTTTGGAATTTGAAAGGGA+AGG 0.622070 8.4:+56451503 MS.gene96163:CDS
GCACCAAATCTGGTATGTGA+AGG 0.622570 8.4:-56450315 None:intergenic
AAGTTAATGCAATCTCTGGA+TGG 0.626795 8.4:+56450601 MS.gene96163:CDS
AAATATAGCAGAAATTGCCA+AGG 0.630713 8.4:-56451562 None:intergenic
TGCACAAAGGCAGAAAGGTG+GGG 0.635393 8.4:+56451745 MS.gene96163:CDS
TGTGAAGGACTCATACAACA+TGG 0.642163 8.4:-56450300 None:intergenic
GTAAGGAAGAACAAGTATGG+AGG 0.645207 8.4:+56450102 MS.gene96163:CDS
GGTGCACAAAGGCAGAAAGG+TGG 0.649495 8.4:+56451743 MS.gene96163:CDS
GGGTAACTGTCAAAATGCCA+GGG 0.653148 8.4:-56451242 None:intergenic
CAGCACCTGAATCATCAACC+CGG 0.661564 8.4:-56452234 None:intergenic
TAATTAACTGTCAACCTATG+GGG 0.661722 8.4:+56452137 MS.gene96163:CDS
TTTCAAGGTCCTCAAGAAGG+AGG 0.662814 8.4:+56451683 MS.gene96163:CDS
TGGTAGAAACTCTGTCACAA+AGG 0.663898 8.4:+56451817 MS.gene96163:CDS
GATATTTGCAAAATACATTG+GGG 0.667589 8.4:+56451844 MS.gene96163:CDS
TGTCAGTTGTACTTTCACAA+AGG 0.678043 8.4:+56450263 MS.gene96163:CDS
GTGTCGATAGGCATAGTGAG+TGG 0.678942 8.4:-56451299 None:intergenic
GTGAAGGACTCATACAACAT+GGG 0.680778 8.4:-56450299 None:intergenic
ATTGAAGGACCAAAGAAGTG+GGG 0.689530 8.4:+56451641 MS.gene96163:CDS
AGGATGAGGCCAGAATTGCA+AGG 0.696977 8.4:+56452023 MS.gene96163:CDS
AGGTGCTGATCCAGTAACCG+TGG 0.698899 8.4:+56451523 MS.gene96163:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAAATTAAAAATAATAACT+GGG - chr8.4:56450781-56450800 None:intergenic 10.0%
!! TAGAAATTAAAAATAAAAAC+GGG + chr8.4:56450733-56450752 MS.gene96163:intron 10.0%
!! TGTAAATTAAAAATAATAAC+TGG - chr8.4:56450782-56450801 None:intergenic 10.0%
!!! TTTTAATTTACATTAAATCA+TGG + chr8.4:56450790-56450809 MS.gene96163:intron 10.0%
!!! TATGATTTTAACAACAATTA+TGG + chr8.4:56451419-56451438 MS.gene96163:CDS 15.0%
!! AAAGTAAAGAGGATAATTAA+AGG - chr8.4:56450939-56450958 None:intergenic 20.0%
!! AGAAATTCATTGAAATACTT+TGG + chr8.4:56450054-56450073 MS.gene96163:CDS 20.0%
!! GAAATTCATTGAAATACTTT+GGG + chr8.4:56450055-56450074 MS.gene96163:CDS 20.0%
!! TGATATTTGCAAAATACATT+GGG + chr8.4:56451843-56451862 MS.gene96163:CDS 20.0%
!!! GGAATTTCAAGTATATTTTA+TGG + chr8.4:56449979-56449998 MS.gene96163:CDS 20.0%
!!! TTCAAGTATATTTTATGGAA+AGG + chr8.4:56449984-56450003 MS.gene96163:CDS 20.0%
! AAAATAAGCACAAAAGATGA+TGG + chr8.4:56452190-56452209 MS.gene96163:CDS 25.0%
! AATTTGTGATCAAAGTAAAG+AGG - chr8.4:56450950-56450969 None:intergenic 25.0%
! AGTATATGTTTCATACATGA+AGG - chr8.4:56450163-56450182 None:intergenic 25.0%
! ATACATAAGATATTTCATCC+TGG + chr8.4:56450012-56450031 MS.gene96163:CDS 25.0%
! CATTAAATCATGGATGAATA+TGG + chr8.4:56450800-56450819 MS.gene96163:intron 25.0%
! CTGATATTTGCAAAATACAT+TGG + chr8.4:56451842-56451861 MS.gene96163:CDS 25.0%
! GAATCTGTTATTCTCAATTA+AGG - chr8.4:56451171-56451190 None:intergenic 25.0%
! GATATTTGCAAAATACATTG+GGG + chr8.4:56451844-56451863 MS.gene96163:CDS 25.0%
! TACATAAGATATTTCATCCT+GGG + chr8.4:56450013-56450032 MS.gene96163:CDS 25.0%
! TTAACAACAATTATGGTACA+TGG + chr8.4:56451426-56451445 MS.gene96163:CDS 25.0%
! TTAATTAACTGTCAACCTAT+GGG + chr8.4:56452136-56452155 MS.gene96163:CDS 25.0%
! TTTAGTTGTGAATCATGTAT+AGG - chr8.4:56450555-56450574 None:intergenic 25.0%
!! ACAATAAAACTCATTTTCCT+TGG - chr8.4:56452396-56452415 None:intergenic 25.0%
!!! ATGATTTGTTGATTGGAAAA+TGG + chr8.4:56452679-56452698 MS.gene96163:intron 25.0%
!!! GGAAAATGAGTTTTATTGTA+TGG + chr8.4:56452397-56452416 MS.gene96163:intron 25.0%
!!! TTTTCAAACTTAAAGCGTTT+TGG - chr8.4:56453125-56453144 None:intergenic 25.0%
AAATATAGCAGAAATTGCCA+AGG - chr8.4:56451565-56451584 None:intergenic 30.0%
AAATCACATTGATGTTGAAG+TGG + chr8.4:56452656-56452675 MS.gene96163:intron 30.0%
AGTTTGAAAGCTGAATTTCA+AGG + chr8.4:56451668-56451687 MS.gene96163:CDS 30.0%
ATGATGAGTACAAGTCAATA+TGG + chr8.4:56450217-56450236 MS.gene96163:CDS 30.0%
ATGTCGCTATTTAAACAAGT+AGG - chr8.4:56450873-56450892 None:intergenic 30.0%
ATGTTAAGGAATATAGAGCA+AGG + chr8.4:56450492-56450511 MS.gene96163:CDS 30.0%
ATTAAAGGTCTGTAGTTGTA+AGG - chr8.4:56450924-56450943 None:intergenic 30.0%
CTTAATTAACTGTCAACCTA+TGG + chr8.4:56452135-56452154 MS.gene96163:CDS 30.0%
CTTGTTCTTCCTTACATATA+TGG - chr8.4:56450097-56450116 None:intergenic 30.0%
GTTTGAAAGCGATAATGTAA+TGG + chr8.4:56452348-56452367 MS.gene96163:intron 30.0%
TAATTAACTGTCAACCTATG+GGG + chr8.4:56452137-56452156 MS.gene96163:CDS 30.0%
TATGTAAGGAAGAACAAGTA+TGG + chr8.4:56450099-56450118 MS.gene96163:CDS 30.0%
TCTTTACCATAGTGTGTTAT+CGG + chr8.4:56452786-56452805 MS.gene96163:intron 30.0%
TGAAATTCAGCTTTCAAACT+TGG - chr8.4:56451668-56451687 None:intergenic 30.0%
TGTCGCTATTTAAACAAGTA+GGG - chr8.4:56450872-56450891 None:intergenic 30.0%
TGTTAAGGAATATAGAGCAA+GGG + chr8.4:56450493-56450512 MS.gene96163:CDS 30.0%
TGTTTCAGATAGCATGAAAA+CGG - chr8.4:56451106-56451125 None:intergenic 30.0%
! AATATTTCTGTCTGAAACAG+TGG + chr8.4:56452494-56452513 MS.gene96163:intron 30.0%
! AATGGAAAGAGTTTTACACA+CGG + chr8.4:56451217-56451236 MS.gene96163:CDS 30.0%
! AGTATATTTTATGGAAAGGC+AGG + chr8.4:56449988-56450007 MS.gene96163:CDS 30.0%
! ATAAAACTCATTTTCCTTGG+CGG - chr8.4:56452393-56452412 None:intergenic 30.0%
! GAATCTCCATAGTTTGTATT+GGG - chr8.4:56452075-56452094 None:intergenic 30.0%
! GCTTTAAGTTTGAAAATGCA+TGG + chr8.4:56453129-56453148 MS.gene96163:CDS 30.0%
! GTTGGTATTGAAAATACGTA+TGG - chr8.4:56450196-56450215 None:intergenic 30.0%
! GTTTTCGTACTTAAAAACCA+CGG - chr8.4:56451543-56451562 None:intergenic 30.0%
! TCTTTTCTTCTTCCATTTTC+TGG - chr8.4:56452729-56452748 None:intergenic 30.0%
! TTTGAAGCAGGATTTATTGA+AGG + chr8.4:56451626-56451645 MS.gene96163:CDS 30.0%
! TTTTATTGTATGGAACTGTC+GGG + chr8.4:56452407-56452426 MS.gene96163:intron 30.0%
!! GTTTTATTGTATGGAACTGT+CGG + chr8.4:56452406-56452425 MS.gene96163:intron 30.0%
!!! AGTGAGTATTGGATTCATTT+TGG - chr8.4:56451004-56451023 None:intergenic 30.0%
!!! GTCTTTCGATTCTTGTTTTA+CGG + chr8.4:56452554-56452573 MS.gene96163:intron 30.0%
!!! GTGAGTATTGGATTCATTTT+GGG - chr8.4:56451003-56451022 None:intergenic 30.0%
!!! GTTTTTAAGTACGAAAACCT+TGG + chr8.4:56451545-56451564 MS.gene96163:CDS 30.0%
!!! TCTTTTGTGCTTATTTTGAG+TGG - chr8.4:56452187-56452206 None:intergenic 30.0%
!!! TGTTTTACGGTTGATAGAAT+TGG + chr8.4:56452567-56452586 MS.gene96163:intron 30.0%
AAATCTCCGATAACACACTA+TGG - chr8.4:56452795-56452814 None:intergenic 35.0%
AAGTTAATGCAATCTCTGGA+TGG + chr8.4:56450601-56450620 MS.gene96163:CDS 35.0%
AGGTTGACAGTTAATTAAGC+TGG - chr8.4:56452134-56452153 None:intergenic 35.0%
AGTAAGATTCATAGTCGAGT+CGG + chr8.4:56451782-56451801 MS.gene96163:CDS 35.0%
ATGGAAGAAGAAAAGAATCG+TGG + chr8.4:56452733-56452752 MS.gene96163:intron 35.0%
CAAATACCTTGCAAAGAATG+AGG - chr8.4:56450666-56450685 None:intergenic 35.0%
CAAGAAGTTAATGCAATCTC+TGG + chr8.4:56450597-56450616 MS.gene96163:CDS 35.0%
CAATGTTGAGATAGGAAATG+TGG - chr8.4:56450704-56450723 None:intergenic 35.0%
CATTGAAATCTGCACTGAAA+GGG - chr8.4:56451904-56451923 None:intergenic 35.0%
CTGTACTACCATGAAATCAA+AGG + chr8.4:56450348-56450367 MS.gene96163:CDS 35.0%
GAAGAACCCAATACAAACTA+TGG + chr8.4:56452066-56452085 MS.gene96163:CDS 35.0%
GAGCACTTGTAAATTCTGAT+TGG + chr8.4:56452994-56453013 MS.gene96163:intron 35.0%
GATTCAGCCATAAATCCAAA+GGG - chr8.4:56451356-56451375 None:intergenic 35.0%
GGATTTATGGCTGAATCAAT+GGG + chr8.4:56451359-56451378 MS.gene96163:CDS 35.0%
GGCAATTTAATGCTGTCTAA+TGG + chr8.4:56450414-56450433 MS.gene96163:CDS 35.0%
GGCAATTTCTGCTATATTTG+TGG + chr8.4:56451566-56451585 MS.gene96163:CDS 35.0%
GGCATGTGTGTATTATGTTA+AGG + chr8.4:56450478-56450497 MS.gene96163:CDS 35.0%
GTAATAATAGATTGCTTCCC+AGG - chr8.4:56450033-56450052 None:intergenic 35.0%
GTTGTGAATCATGTATAGGA+AGG - chr8.4:56450551-56450570 None:intergenic 35.0%
TAAATAGCGACATTCAGAAG+AGG + chr8.4:56450880-56450899 MS.gene96163:intron 35.0%
TAACATTCATGGTGACTCTA+AGG - chr8.4:56451466-56451485 None:intergenic 35.0%
TAACCTTCCCTTTGGATTTA+TGG + chr8.4:56451346-56451365 MS.gene96163:CDS 35.0%
TACTTAAAAACCACGGTTAC+TGG - chr8.4:56451536-56451555 None:intergenic 35.0%
TATCAACCTCATTCTTTGCA+AGG + chr8.4:56450657-56450676 MS.gene96163:intron 35.0%
TATTGAAGGACCAAAGAAGT+GGG + chr8.4:56451640-56451659 MS.gene96163:CDS 35.0%
TCAGACAGAAATATTCCTTC+CGG - chr8.4:56452489-56452508 None:intergenic 35.0%
TGAGTCAACTTTCAGCTTTA+TGG + chr8.4:56450457-56450476 MS.gene96163:CDS 35.0%
TGATTCAGCCATAAATCCAA+AGG - chr8.4:56451357-56451376 None:intergenic 35.0%
TGATTTACATGACTGCTGTT+TGG + chr8.4:56451052-56451071 MS.gene96163:intron 35.0%
TGGAAGAAGAAAAGAATCGT+GGG + chr8.4:56452734-56452753 MS.gene96163:intron 35.0%
TGGATTTATGGCTGAATCAA+TGG + chr8.4:56451358-56451377 MS.gene96163:CDS 35.0%
TGTCAGTTGTACTTTCACAA+AGG + chr8.4:56450263-56450282 MS.gene96163:CDS 35.0%
TTATTGAAGGACCAAAGAAG+TGG + chr8.4:56451639-56451658 MS.gene96163:CDS 35.0%
TTCACTTGGTTCAAAAGTCT+CGG + chr8.4:56452939-56452958 MS.gene96163:intron 35.0%
TTCTCTAGCAATAGATAGTC+AGG + chr8.4:56452300-56452319 MS.gene96163:intron 35.0%
TTTATTGTATGGAACTGTCG+GGG + chr8.4:56452408-56452427 MS.gene96163:intron 35.0%
! AAATCCTGCTTCAAACCTTT+TGG - chr8.4:56451621-56451640 None:intergenic 35.0%
! AATCCTGCTTCAAACCTTTT+GGG - chr8.4:56451620-56451639 None:intergenic 35.0%
! AGCAGTGTTTGGAATTTGAA+AGG + chr8.4:56451498-56451517 MS.gene96163:CDS 35.0%
! AGTCTTGTGCCATATATGTA+AGG + chr8.4:56450085-56450104 MS.gene96163:CDS 35.0%
! ATGGAAAGAGTTTTACACAC+GGG + chr8.4:56451218-56451237 MS.gene96163:CDS 35.0%
! ATTTCAGCAGTTTTCCAACA+TGG - chr8.4:56451400-56451419 None:intergenic 35.0%
! GCAGTGTTTGGAATTTGAAA+GGG + chr8.4:56451499-56451518 MS.gene96163:CDS 35.0%
! GGAATCTCCATAGTTTGTAT+TGG - chr8.4:56452076-56452095 None:intergenic 35.0%
! TAAAACTCATTTTCCTTGGC+GGG - chr8.4:56452392-56452411 None:intergenic 35.0%
! TAAGAGTGCAATGTTGAGAT+AGG - chr8.4:56450712-56450731 None:intergenic 35.0%
! TGACTTGTACTCATCATAGT+TGG - chr8.4:56450214-56450233 None:intergenic 35.0%
! TGCACTTGTTGCTTAAAATC+AGG - chr8.4:56453164-56453183 None:intergenic 35.0%
! TGCTATATTTGTGGATTGCT+AGG + chr8.4:56451575-56451594 MS.gene96163:CDS 35.0%
! TGTTTGGAATTTGAAAGGGA+AGG + chr8.4:56451503-56451522 MS.gene96163:CDS 35.0%
! TTTGTGAAAGTACAACTGAC+AGG - chr8.4:56450264-56450283 None:intergenic 35.0%
! TTTTATGGGATGCCAGAAAA+TGG + chr8.4:56452714-56452733 MS.gene96163:intron 35.0%
!! AGTATTGGATTCATTTTGGG+AGG - chr8.4:56451000-56451019 None:intergenic 35.0%
!! CATGTAAATCAGTGTTGGTT+TGG - chr8.4:56451043-56451062 None:intergenic 35.0%
!! GAAGTGGATGATTTGTTGAT+TGG + chr8.4:56452672-56452691 MS.gene96163:intron 35.0%
!! GTATTGGATTCATTTTGGGA+GGG - chr8.4:56450999-56451018 None:intergenic 35.0%
!! TACGGTTGATAGAATTGGTA+GGG + chr8.4:56452572-56452591 MS.gene96163:intron 35.0%
!! TACTTTCACAAAGGCATTAC+AGG + chr8.4:56450272-56450291 MS.gene96163:CDS 35.0%
!! TTACGGTTGATAGAATTGGT+AGG + chr8.4:56452571-56452590 MS.gene96163:intron 35.0%
!!! CTTTTTCAGTTCTTCGATCA+GGG + chr8.4:56451191-56451210 MS.gene96163:CDS 35.0%
!!! TTTTGTTGTTGCACAAGAAC+AGG - chr8.4:56452097-56452116 None:intergenic 35.0%
AATTCCAAACACTGCTTCAG+CGG - chr8.4:56451494-56451513 None:intergenic 40.0%
AGTCCTTCACATACCAGATT+TGG + chr8.4:56450312-56450331 MS.gene96163:CDS 40.0%
ATGCAGAATTGCACCAAATC+TGG - chr8.4:56450328-56450347 None:intergenic 40.0%
ATTGAAGGACCAAAGAAGTG+GGG + chr8.4:56451641-56451660 MS.gene96163:CDS 40.0%
ATTGGAAAATGGCGATTGAC+TGG + chr8.4:56452690-56452709 MS.gene96163:intron 40.0%
ATTGTGGCTCACTTGCAAAT+CGG + chr8.4:56453079-56453098 MS.gene96163:CDS 40.0%
ATTTGCAAGTGAGCCACAAT+GGG - chr8.4:56453079-56453098 None:intergenic 40.0%
CAACATGGTTTCCCAAAAGA+TGG - chr8.4:56451385-56451404 None:intergenic 40.0%
CACAAAACAGCAGCAATGAA+TGG + chr8.4:56451867-56451886 MS.gene96163:CDS 40.0%
CAGATAGCATGAAAACGGAT+AGG - chr8.4:56451101-56451120 None:intergenic 40.0%
CAGCGGTTCATTAACATTCA+TGG - chr8.4:56451477-56451496 None:intergenic 40.0%
CATCTGAAGAGAAGAAAGGT+AGG + chr8.4:56452829-56452848 MS.gene96163:intron 40.0%
CCTGATCGAAGAACTGAAAA+AGG - chr8.4:56451193-56451212 None:intergenic 40.0%
CCTTATCCGAACATACAAAC+CGG + chr8.4:56452467-56452486 MS.gene96163:intron 40.0%
CGGAGATTTCAACGACATAT+TGG + chr8.4:56452806-56452825 MS.gene96163:intron 40.0%
CTATGAATCTTACTGCAAGC+TGG - chr8.4:56451776-56451795 None:intergenic 40.0%
CTGCTAGTTGGAGTATGTTT+GGG - chr8.4:56451964-56451983 None:intergenic 40.0%
CTTCTGATCATTACCCATTG+TGG + chr8.4:56453063-56453082 MS.gene96163:CDS 40.0%
GAAGAACAAGTATGGAGGTT+GGG + chr8.4:56450107-56450126 MS.gene96163:CDS 40.0%
GAATTTCAAGGTCCTCAAGA+AGG + chr8.4:56451680-56451699 MS.gene96163:CDS 40.0%
GATGCTGTTCAGACAAACAT+AGG + chr8.4:56452277-56452296 MS.gene96163:CDS 40.0%
GCAGCTTTCTTGACAAGTAA+AGG + chr8.4:56450393-56450412 MS.gene96163:CDS 40.0%
GCAGTCATGTAAATCAGTGT+TGG - chr8.4:56451048-56451067 None:intergenic 40.0%
GCATTGAAATCTGCACTGAA+AGG - chr8.4:56451905-56451924 None:intergenic 40.0%
GTAAGATTCATAGTCGAGTC+GGG + chr8.4:56451783-56451802 MS.gene96163:CDS 40.0%
GTAAGGAAGAACAAGTATGG+AGG + chr8.4:56450102-56450121 MS.gene96163:CDS 40.0%
GTGAAGGACTCATACAACAT+GGG - chr8.4:56450302-56450321 None:intergenic 40.0%
GTTGCATCCATTTGTTTGTC+AGG - chr8.4:56451149-56451168 None:intergenic 40.0%
TAAGGAATATAGAGCAAGGG+AGG + chr8.4:56450496-56450515 MS.gene96163:CDS 40.0%
TATTACGACTCCAATCAGTC+AGG - chr8.4:56453250-56453269 None:intergenic 40.0%
TCAGTGCAGATTTCAATGCT+TGG + chr8.4:56451906-56451925 MS.gene96163:CDS 40.0%
TGGTAGAAACTCTGTCACAA+AGG + chr8.4:56451817-56451836 MS.gene96163:CDS 40.0%
TGTAACATGTTCCCAAATGC+AGG + chr8.4:56453017-56453036 MS.gene96163:intron 40.0%
TGTGAAGGACTCATACAACA+TGG - chr8.4:56450303-56450322 None:intergenic 40.0%
TTGGCATCTGAAGAGAAGAA+AGG + chr8.4:56452825-56452844 MS.gene96163:intron 40.0%
TTTCTTGTCTTCTCAGCCAA+GGG - chr8.4:56451721-56451740 None:intergenic 40.0%
! AAATCAAAGGCGCAAAAGGA+GGG + chr8.4:56450361-56450380 MS.gene96163:CDS 40.0%
! ATCCTGCTTCAAACCTTTTG+GGG - chr8.4:56451619-56451638 None:intergenic 40.0%
! CATGAAATCAAAGGCGCAAA+AGG + chr8.4:56450357-56450376 MS.gene96163:CDS 40.0%
! CTGTTTGACTTACACATGAC+TGG + chr8.4:56452909-56452928 MS.gene96163:intron 40.0%
! GAATCAATGGGCCATCTTTT+GGG + chr8.4:56451371-56451390 MS.gene96163:CDS 40.0%
! TACATGACTGCTGTTTGGTT+GGG + chr8.4:56451057-56451076 MS.gene96163:intron 40.0%
! TGAATCAATGGGCCATCTTT+TGG + chr8.4:56451370-56451389 MS.gene96163:CDS 40.0%
! TGACTGGTTATGCTTTCACT+TGG + chr8.4:56452925-56452944 MS.gene96163:intron 40.0%
! TTACATGACTGCTGTTTGGT+TGG + chr8.4:56451056-56451075 MS.gene96163:intron 40.0%
! TTCCTTCCGGTTTGTATGTT+CGG - chr8.4:56452476-56452495 None:intergenic 40.0%
! TTTTGCGTGATACCTTCTTC+AGG - chr8.4:56453206-56453225 None:intergenic 40.0%
!! ACGGTTGATAGAATTGGTAG+GGG + chr8.4:56452573-56452592 MS.gene96163:intron 40.0%
!! CATCTTTTGGGAAACCATGT+TGG + chr8.4:56451383-56451402 MS.gene96163:CDS 40.0%
!! CTTTTGCGCCTTTGATTTCA+TGG - chr8.4:56450359-56450378 None:intergenic 40.0%
!!! CCTTTTTCAGTTCTTCGATC+AGG + chr8.4:56451190-56451209 MS.gene96163:CDS 40.0%
!!! GGCGATTGACTGGTTTTTAT+GGG + chr8.4:56452700-56452719 MS.gene96163:intron 40.0%
!!! TGGCGATTGACTGGTTTTTA+TGG + chr8.4:56452699-56452718 MS.gene96163:intron 40.0%
AAACTTGGTCCCCACTTCTT+TGG - chr8.4:56451653-56451672 None:intergenic 45.0%
ACTCCAATCAGTCAGGTCTT+CGG - chr8.4:56453243-56453262 None:intergenic 45.0%
AGGCATTCAACACCTGCATT+TGG - chr8.4:56453032-56453051 None:intergenic 45.0%
AGGGTAACTGTCAAAATGCC+AGG - chr8.4:56451246-56451265 None:intergenic 45.0%
ATACTCCAACTAGCAGGAAC+GGG + chr8.4:56451968-56451987 MS.gene96163:CDS 45.0%
ATCAGGCTGAGAGTGAGTAT+TGG - chr8.4:56451015-56451034 None:intergenic 45.0%
ATCCGAACATACAAACCGGA+AGG + chr8.4:56452471-56452490 MS.gene96163:intron 45.0%
ATGCACCAACCTTGCAATTC+TGG - chr8.4:56452035-56452054 None:intergenic 45.0%
CAAGCTCATAACCTTCCCTT+TGG + chr8.4:56451338-56451357 MS.gene96163:CDS 45.0%
CAGCCATAAATCCAAAGGGA+AGG - chr8.4:56451352-56451371 None:intergenic 45.0%
CATACTCCAACTAGCAGGAA+CGG + chr8.4:56451967-56451986 MS.gene96163:CDS 45.0%
CCAAACATACTCCAACTAGC+AGG + chr8.4:56451962-56451981 MS.gene96163:CDS 45.0%
CCTGCTAGTTGGAGTATGTT+TGG - chr8.4:56451965-56451984 None:intergenic 45.0%
CTATCGACACGATGGACATA+TGG + chr8.4:56451312-56451331 MS.gene96163:CDS 45.0%
GAAACAGACTTGCACATCTC+TGG + chr8.4:56451120-56451139 MS.gene96163:intron 45.0%
GAATATAGAGCAAGGGAGGA+GGG + chr8.4:56450500-56450519 MS.gene96163:CDS 45.0%
GACAAGAAACAGGTGCACAA+AGG + chr8.4:56451732-56451751 MS.gene96163:CDS 45.0%
GATAATGTAATGGCAGAGCC+TGG + chr8.4:56452358-56452377 MS.gene96163:intron 45.0%
GATCAGAAGATGTCGTCGAA+AGG - chr8.4:56453052-56453071 None:intergenic 45.0%
GATTTGCAAGTGAGCCACAA+TGG - chr8.4:56453080-56453099 None:intergenic 45.0%
GCACCAAATCTGGTATGTGA+AGG - chr8.4:56450318-56450337 None:intergenic 45.0%
GGAAGAACAAGTATGGAGGT+TGG + chr8.4:56450106-56450125 MS.gene96163:CDS 45.0%
GGCATTCAACACCTGCATTT+GGG - chr8.4:56453031-56453050 None:intergenic 45.0%
GGGTAACTGTCAAAATGCCA+GGG - chr8.4:56451245-56451264 None:intergenic 45.0%
GTTCTTCGATCAGGGAGAAA+TGG + chr8.4:56451199-56451218 MS.gene96163:CDS 45.0%
GTTTCTTGTCTTCTCAGCCA+AGG - chr8.4:56451722-56451741 None:intergenic 45.0%
TAAAACAGCTGAAGCGAAGC+CGG + chr8.4:56452215-56452234 MS.gene96163:CDS 45.0%
TGGAACAGAAATGTTGCTGC+TGG + chr8.4:56450434-56450453 MS.gene96163:CDS 45.0%
TGGAAGCTCTATCCTGAAGA+AGG + chr8.4:56453191-56453210 MS.gene96163:CDS 45.0%
TGGCTGAGAAGACAAGAAAC+AGG + chr8.4:56451722-56451741 MS.gene96163:CDS 45.0%
TTTCAAGGTCCTCAAGAAGG+AGG + chr8.4:56451683-56451702 MS.gene96163:CDS 45.0%
! AAGTATGGAGGTTGGGTTGT+AGG + chr8.4:56450114-56450133 MS.gene96163:CDS 45.0%
! AATCAAAGGCGCAAAAGGAG+GGG + chr8.4:56450362-56450381 MS.gene96163:CDS 45.0%
! CATATGTCCATCGTGTCGAT+AGG - chr8.4:56451314-56451333 None:intergenic 45.0%
! CCGGTTTGTATGTTCGGATA+AGG - chr8.4:56452470-56452489 None:intergenic 45.0%
! CGGATAAGGTACTTCAGAGT+GGG - chr8.4:56452456-56452475 None:intergenic 45.0%
! CTTCTCTTCAACAGCTCTAG+CGG - chr8.4:56452967-56452986 None:intergenic 45.0%
! GAAATCAAAGGCGCAAAAGG+AGG + chr8.4:56450360-56450379 MS.gene96163:CDS 45.0%
! GTTGATAGAATTGGTAGGGG+AGG + chr8.4:56452576-56452595 MS.gene96163:intron 45.0%
! TCGGATAAGGTACTTCAGAG+TGG - chr8.4:56452457-56452476 None:intergenic 45.0%
!! CTGATGCTTTTTGCCCCAAA+AGG + chr8.4:56451603-56451622 MS.gene96163:CDS 45.0%
!! GGGATTTGTTGACATGGTTG+TGG - chr8.4:56450979-56450998 None:intergenic 45.0%
!! GTGTTGGTTTGGCTTTGATC+AGG - chr8.4:56451032-56451051 None:intergenic 45.0%
!! TGATGATTCAGGTGCTGAAG+TGG + chr8.4:56452240-56452259 MS.gene96163:CDS 45.0%
!! TTGGGAGGGATTTGTTGACA+TGG - chr8.4:56450985-56451004 None:intergenic 45.0%
!! ATAGAAATTAAAAATAAAAA+CGG + chr8.4:56450732-56450751 MS.gene96163:intron 5.0%
AAAACAGCTGAAGCGAAGCC+GGG + chr8.4:56452216-56452235 MS.gene96163:CDS 50.0%
ACACTGCTTGCCTGAAACCA+CGG - chr8.4:56452878-56452897 None:intergenic 50.0%
ACAGGTGCACAAAGGCAGAA+AGG + chr8.4:56451740-56451759 MS.gene96163:CDS 50.0%
AGGATGAGGCCAGAATTGCA+AGG + chr8.4:56452023-56452042 MS.gene96163:CDS 50.0%
AGTTGGAGTATGTTTGGGCC+TGG - chr8.4:56451959-56451978 None:intergenic 50.0%
CACTATGCCTATCGACACGA+TGG + chr8.4:56451304-56451323 MS.gene96163:CDS 50.0%
CAGCACCTGAATCATCAACC+CGG - chr8.4:56452237-56452256 None:intergenic 50.0%
CGAGTCGGGAAAGTCAAGAT+TGG + chr8.4:56451797-56451816 MS.gene96163:CDS 50.0%
CTCTGGATGGCAGACTGAAA+AGG + chr8.4:56450614-56450633 MS.gene96163:CDS 50.0%
CTGCTACGCAAGCTTCAGTT+TGG + chr8.4:56451269-56451288 MS.gene96163:CDS 50.0%
CTGGCAGCCTGACAAACAAA+TGG + chr8.4:56451139-56451158 MS.gene96163:CDS 50.0%
GAAGCTTGCGTAGCAGCATA+GGG - chr8.4:56451265-56451284 None:intergenic 50.0%
GATAGAATTGGTAGGGGAGG+AGG + chr8.4:56452579-56452598 MS.gene96163:intron 50.0%
GGAATATAGAGCAAGGGAGG+AGG + chr8.4:56450499-56450518 MS.gene96163:CDS 50.0%
GTGAACACTCCTCCTTCTTG+AGG - chr8.4:56451695-56451714 None:intergenic 50.0%
GTGCACAAAGGCAGAAAGGT+GGG + chr8.4:56451744-56451763 MS.gene96163:CDS 50.0%
TAACTGTCAACCTATGGGGC+AGG + chr8.4:56452141-56452160 MS.gene96163:CDS 50.0%
TGAACCGCTGAAGCAGTGTT+TGG + chr8.4:56451487-56451506 MS.gene96163:CDS 50.0%
TGAAGCTTGCGTAGCAGCAT+AGG - chr8.4:56451266-56451285 None:intergenic 50.0%
TGAGGCCAGAATTGCAAGGT+TGG + chr8.4:56452027-56452046 MS.gene96163:CDS 50.0%
TGCACAAAGGCAGAAAGGTG+GGG + chr8.4:56451745-56451764 MS.gene96163:CDS 50.0%
TGCTGAACAGGAAGAGGATG+AGG + chr8.4:56452009-56452028 MS.gene96163:CDS 50.0%
TGGTTTCAGGCAAGCAGTGT+TGG + chr8.4:56452878-56452897 MS.gene96163:intron 50.0%
TGTTCAGCACGCACTTCAGA+AGG - chr8.4:56451998-56452017 None:intergenic 50.0%
TTCAGAGTGGGAACTGTGCT+CGG - chr8.4:56452444-56452463 None:intergenic 50.0%
TTTCAATGCTTGGCCAGTCG+TGG + chr8.4:56451916-56451935 MS.gene96163:CDS 50.0%
! ACTGCTGTTTGGTTGGGAGA+TGG + chr8.4:56451063-56451082 MS.gene96163:intron 50.0%
! GAGATTGGAAGAAGGAGTGC+AGG + chr8.4:56449958-56449977 MS.gene96163:CDS 50.0%
! GTGTCGATAGGCATAGTGAG+TGG - chr8.4:56451302-56451321 None:intergenic 50.0%
! TATGGAGGTTGGGTTGTAGG+AGG + chr8.4:56450117-56450136 MS.gene96163:CDS 50.0%
! TGCCCCAAAAGGTTTGAAGC+AGG + chr8.4:56451614-56451633 MS.gene96163:CDS 50.0%
!! GAGGAGGCTTGGCTTTTCTT+TGG + chr8.4:56452595-56452614 MS.gene96163:intron 50.0%
!! GAGGAGTGTTCACAAACCCT+TGG + chr8.4:56451702-56451721 MS.gene96163:CDS 50.0%
!! TGGGGCAAAAAGCATCAGTG+TGG - chr8.4:56451601-56451620 None:intergenic 50.0%
!! TTCTGAAGTGCGTGCTGAAC+AGG + chr8.4:56451997-56452016 MS.gene96163:CDS 50.0%
AATTGGTAGGGGAGGAGGCT+TGG + chr8.4:56452584-56452603 MS.gene96163:intron 55.0%
AGCAACAAGTGCAGCAACGC+TGG + chr8.4:56453171-56453190 MS.gene96163:CDS 55.0%
AGTGCGTGCTGAACAGGAAG+AGG + chr8.4:56452003-56452022 MS.gene96163:CDS 55.0%
CTGAAACCACGGATCAGCCA+AGG - chr8.4:56452867-56452886 None:intergenic 55.0%
CTTGGCTGATCCGTGGTTTC+AGG + chr8.4:56452865-56452884 MS.gene96163:intron 55.0%
GGTGCACAAAGGCAGAAAGG+TGG + chr8.4:56451743-56451762 MS.gene96163:CDS 55.0%
GTAGGTCAGAGAGAGCTCCT+TGG + chr8.4:56452847-56452866 MS.gene96163:intron 55.0%
GTCAACCTATGGGGCAGGTT+AGG + chr8.4:56452146-56452165 MS.gene96163:CDS 55.0%
GTCATCCTAACCTGCCCCAT+AGG - chr8.4:56452154-56452173 None:intergenic 55.0%
GTTCTCCCGTTCCTGCTAGT+TGG - chr8.4:56451976-56451995 None:intergenic 55.0%
TCAGAGTGGGAACTGTGCTC+GGG - chr8.4:56452443-56452462 None:intergenic 55.0%
! GAGTTTTACACACGGGACCC+TGG + chr8.4:56451225-56451244 MS.gene96163:CDS 55.0%
! GTTGGGTTGTAGGAGGCGTA+TGG + chr8.4:56450124-56450143 MS.gene96163:CDS 55.0%
!! AGGTGCTGATCCAGTAACCG+TGG + chr8.4:56451523-56451542 MS.gene96163:CDS 55.0%
!! CGAAGCCGGGTTGATGATTC+AGG + chr8.4:56452229-56452248 MS.gene96163:CDS 55.0%
!! GGGAGAGAAGGCGTTACAGA+AGG + chr8.4:56450520-56450539 MS.gene96163:CDS 55.0%
AATGGCAGAGCCTGGTCACC+AGG + chr8.4:56452366-56452385 MS.gene96163:intron 60.0%
AGAGCTCCTTGGCTGATCCG+TGG + chr8.4:56452858-56452877 MS.gene96163:intron 60.0%
AGCAAGGGAGGAGGGAGAGA+AGG + chr8.4:56450508-56450527 MS.gene96163:CDS 60.0%
GAAGTCGCTGCTGCTGAACC+AGG + chr8.4:56451938-56451957 MS.gene96163:CDS 60.0%
GCGCCGAAGACCTGACTGAT+TGG + chr8.4:56453237-56453256 MS.gene96163:intron 60.0%
GTATGGAACTGTCGGGGCCT+GGG + chr8.4:56452414-56452433 MS.gene96163:intron 60.0%
TGTATGGAACTGTCGGGGCC+TGG + chr8.4:56452413-56452432 MS.gene96163:intron 60.0%
! AGGCAAGCAGTGTTGGACGC+GGG + chr8.4:56452885-56452904 MS.gene96163:intron 60.0%
! CAGGCAAGCAGTGTTGGACG+CGG + chr8.4:56452884-56452903 MS.gene96163:intron 60.0%
! GGGTTGTAGGAGGCGTATGG+TGG + chr8.4:56450127-56450146 MS.gene96163:CDS 60.0%
!! CTCATTTTCCTTGGCGGGCC+TGG - chr8.4:56452387-56452406 None:intergenic 60.0%
GCAGCAGCGACTTCCACGAC+TGG - chr8.4:56451932-56451951 None:intergenic 65.0%
GAACTGTGCTCGGGCTGCCC+AGG - chr8.4:56452434-56452453 None:intergenic 70.0%
CCTGGTCACCAGGCCCGCCA+AGG + chr8.4:56452376-56452395 MS.gene96163:intron 75.0%
! CCTTGGCGGGCCTGGTGACC+AGG - chr8.4:56452379-56452398 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 56449955 56453314 56449955 ID=MS.gene96163
chr8.4 mRNA 56449955 56453314 56449955 ID=MS.gene96163.t1;Parent=MS.gene96163
chr8.4 exon 56449955 56450655 56449955 ID=MS.gene96163.t1.exon1;Parent=MS.gene96163.t1
chr8.4 CDS 56449955 56450655 56449955 ID=cds.MS.gene96163.t1;Parent=MS.gene96163.t1
chr8.4 exon 56451127 56452298 56451127 ID=MS.gene96163.t1.exon2;Parent=MS.gene96163.t1
chr8.4 CDS 56451127 56452298 56451127 ID=cds.MS.gene96163.t1;Parent=MS.gene96163.t1
chr8.4 exon 56453039 56453212 56453039 ID=MS.gene96163.t1.exon3;Parent=MS.gene96163.t1
chr8.4 CDS 56453039 56453212 56453039 ID=cds.MS.gene96163.t1;Parent=MS.gene96163.t1
chr8.4 exon 56453286 56453314 56453286 ID=MS.gene96163.t1.exon4;Parent=MS.gene96163.t1
chr8.4 CDS 56453286 56453314 56453286 ID=cds.MS.gene96163.t1;Parent=MS.gene96163.t1
Gene Sequence

>MS.gene96163

ATGGAGATTGGAAGAAGGAGTGCAGGAATTTCAAGTATATTTTATGGAAAGGCAGGCATACATAAGATATTTCATCCTGGGAAGCAATCTATTATTACAAGAAATTCATTGAAATACTTTGGGATTCATGAGTCTTGTGCCATATATGTAAGGAAGAACAAGTATGGAGGTTGGGTTGTAGGAGGCGTATGGTGGCTTGTTTCTTCCTTCATGTATGAAACATATACTCATTGTAATTCCATACGTATTTTCAATACCAACTATGATGAGTACAAGTCAATATGGACAGTTTTAAGCTTATTGAATCCTGTCAGTTGTACTTTCACAAAGGCATTACAGGATATCCCATGTTGTATGAGTCCTTCACATACCAGATTTGGTGCAATTCTGCATCTGTACTACCATGAAATCAAAGGCGCAAAAGGAGGGGACGCGTTAGCAGCTTTCTTGACAAGTAAAGGCAATTTAATGCTGTCTAATGGAACAGAAATGTTGCTGCTGGTGAGTCAACTTTCAGCTTTATGGCATGTGTGTATTATGTTAAGGAATATAGAGCAAGGGAGGAGGGAGAGAAGGCGTTACAGAAGGCTCTACCTTCCTATACATGATTCACAACTAAATGTCATTAAGACAGAAGATACTCAAGAAGTTAATGCAATCTCTGGATGGCAGACTGAAAAGGAAATATGCTTAGTCAACAAGTATCAACCTCATTCTTTGCAAGGTATTTGTGCTGACAGACTTAACCACATTTCCTATCTCAACATTGCACTCTTAATAGAAATTAAAAATAAAAACGGGATTGAAATTTCACTGATCAATTCCCAGTTATTATTTTTAATTTACATTAAATCATGGATGAATATGGAATTAGCTTTTATGACTCATTCAAAAAATCAGCAAATCAAGCTCATCCCTACTTGTTTAAATAGCGACATTCAGAAGAGGATCAATCACAATCATATGCCTTACAACTACAGACCTTTAATTATCCTCTTTACTTTGATCACAAATTCTGTCACCACAACCATGTCAACAAATCCCTCCCAAAATGAATCCAATACTCACTCTCAGCCTGATCAAAGCCAAACCAACACTGATTTACATGACTGCTGTTTGGTTGGGAGATGGCTTAGTAACAAACCTATCCGTTTTCATGCTATCTGAAACAGACTTGCACATCTCTGGCAGCCTGACAAACAAATGGATGCAACCTTAATTGAGAATAACAGATTCCTTTTTCAGTTCTTCGATCAGGGAGAAATGGAAAGAGTTTTACACACGGGACCCTGGCATTTTGACAGTTACCCTATGCTGCTACGCAAGCTTCAGTTTGGTGAAAATCCACTCACTATGCCTATCGACACGATGGACATATGGATTCAAGCTCATAACCTTCCCTTTGGATTTATGGCTGAATCAATGGGCCATCTTTTGGGAAACCATGTTGGAAAACTGCTGAAATATGATTTTAACAACAATTATGGTACATGGCGTAAGTACATGCGCCTTAGAGTCACCATGAATGTTAATGAACCGCTGAAGCAGTGTTTGGAATTTGAAAGGGAAGGTGCTGATCCAGTAACCGTGGTTTTTAAGTACGAAAACCTTGGCAATTTCTGCTATATTTGTGGATTGCTAGGCCACACTGATGCTTTTTGCCCCAAAAGGTTTGAAGCAGGATTTATTGAAGGACCAAAGAAGTGGGGACCAAGTTTGAAAGCTGAATTTCAAGGTCCTCAAGAAGGAGGAGTGTTCACAAACCCTTGGCTGAGAAGACAAGAAACAGGTGCACAAAGGCAGAAAGGTGGGGAACGTCCAGCTTGCAGTAAGATTCATAGTCGAGTCGGGAAAGTCAAGATTGGTAGAAACTCTGTCACAAAGGAGCTGATATTTGCAAAATACATTGGGGCACAAAACAGCAGCAATGAATGGATTATTTTTGACCCTTTCAGTGCAGATTTCAATGCTTGGCCAGTCGTGGAAGTCGCTGCTGCTGAACCAGGCCCAAACATACTCCAACTAGCAGGAACGGGAGAACCTTCTGAAGTGCGTGCTGAACAGGAAGAGGATGAGGCCAGAATTGCAAGGTTGGTGCATGAAGCAAGATTGAAGAACCCAATACAAACTATGGAGATTCCTGTTCTTGTGCAACAACAAAATACTCAGATTGCTGCCAGCTTAATTAACTGTCAACCTATGGGGCAGGTTAGGATGACTGCTGCGCTGCCACTCAAAATAAGCACAAAAGATGATGGTTTAAAACAGCTGAAGCGAAGCCGGGTTGATGATTCAGGTGCTGAAGTGGAAGTTTCTGATGTTGATGCTGTTCAGACAAACATAGGTTCTCTAGCAATAGATAGTCAGGAAATTGTAATAAGAGATAACTGTCTGTTTGAAAGCGATAATGTAATGGCAGAGCCTGGTCACCAGGCCCGCCAAGGAAAATGAGTTTTATTGTATGGAACTGTCGGGGCCTGGGCAGCCCGAGCACAGTTCCCACTCTGAAGTACCTTATCCGAACATACAAACCGGAAGGAATATTTCTGTCTGAAACAGTGGCAGCTTTAAATAAAATTGAAGAATTAAAGTATATTTTGTCTTTCGATTCTTGTTTTACGGTTGATAGAATTGGTAGGGGAGGAGGCTTGGCTTTTCTTTGGAAAAATTCTGCTAACTGTACTATTACAAATTTCTCTCAAAATCACATTGATGTTGAAGTGGATGATTTGTTGATTGGAAAATGGCGATTGACTGGTTTTTATGGGATGCCAGAAAATGGAAGAAGAAAAGAATCGTGGGCTTTCTTAAAAAATCTAGCAAGAACTTCTTCTTTACCATAGTGTGTTATCGGAGATTTCAACGACATATTGGCATCTGAAGAGAAGAAAGGTAGGTCAGAGAGAGCTCCTTGGCTGATCCGTGGTTTCAGGCAAGCAGTGTTGGACGCGGGTCTGTTTGACTTACACATGACTGGTTATGCTTTCACTTGGTTCAAAAGTCTCGGTACCGCTAGAGCTGTTGAAGAGAAGCTAGACAGAGCACTTGTAAATTCTGATTGGTGTAACATGTTCCCAAATGCAGGTGTTGAATGCCTTTCGACGACATCTTCTGATCATTACCCATTGTGGCTCACTTGCAAATCGGTTACTGCTGTCAACAGAAATCCAAAACGCTTTAAGTTTGAAAATGCATGGCTCACTGAACCTGATTTTAAGCAACAAGTGCAGCAACGCTGGAAGCTCTATCCTGAAGAAGGTATCACGCAAAAATTGAGTTATTGCGCCGAAGACCTGACTGATTGGAGTCGTAATAACAACAATTTTCGCAGTGACATCAGTAAAGTTCAAAAGAAAATAG
Protein sequence

>MS.gene96163.t1

MEIGRRSAGISSIFYGKAGIHKIFHPGKQSIITRNSLKYFGIHESCAIYVRKNKYGGWVVGGVWWLVSSFMYETYTHCNSIRIFNTNYDEYKSIWTVLSLLNPVSCTFTKALQDIPCCMSPSHTRFGAILHLYYHEIKGAKGGDALAAFLTSKGNLMLSNGTEMLLLVSQLSALWHVCIMLRNIEQGRRERRRYRRLYLPIHDSQLNVIKTEDTQEVNAISGWQTEKEICLVNKLAHLWQPDKQMDATLIENNRFLFQFFDQGEMERVLHTGPWHFDSYPMLLRKLQFGENPLTMPIDTMDIWIQAHNLPFGFMAESMGHLLGNHVGKLLKYDFNNNYGTWRKYMRLRVTMNVNEPLKQCLEFEREGADPVTVVFKYENLGNFCYICGLLGHTDAFCPKRFEAGFIEGPKKWGPSLKAEFQGPQEGGVFTNPWLRRQETGAQRQKGGERPACSKIHSRVGKVKIGRNSVTKELIFAKYIGAQNSSNEWIIFDPFSADFNAWPVVEVAAAEPGPNILQLAGTGEPSEVRAEQEEDEARIARLVHEARLKNPIQTMEIPVLVQQQNTQIAASLINCQPMGQVRMTAALPLKISTKDDGLKQLKRSRVDDSGAEVEVSDVDAVQTNIGVECLSTTSSDHYPLWLTCKSVTAVNRNPKRFKFENAWLTEPDFKQQVQQRWKLYPEEVTSVKFKRK