Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002590.t1 | XP_024630605.1 | 48.6 | 208 | 99 | 3 | 20 | 227 | 114 | 313 | 7.00E-48 | 201.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002590.t1 | G7J017 | 45.7 | 197 | 56 | 2 | 20 | 216 | 135 | 280 | 1.6e-33 | 152.9 |
TFs/TRs:
Gene ID | Type | Classification |
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Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002590.t1 | MTR_3g053920 | 45.685 | 197 | 56 | 2 | 20 | 216 | 135 | 280 | 6.09e-43 | 148 |
MS.gene002590.t1 | MTR_8g463110 | 57.500 | 120 | 49 | 1 | 159 | 276 | 1 | 120 | 2.51e-30 | 120 |
MS.gene002590.t1 | MTR_4g103530 | 46.875 | 64 | 34 | 0 | 121 | 184 | 119 | 182 | 7.91e-12 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 79 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTAGCTAACACTGCATTT+TGG | 0.177584 | 2.1:+69422966 | None:intergenic |
ATTTGCTGCTGAAGGGGATA+TGG | 0.237024 | 2.1:-69422732 | MS.gene002590:CDS |
CTCAGCTTCCAGCATGTTTA+CGG | 0.284643 | 2.1:-69422882 | MS.gene002590:CDS |
CTGATGATGGTGTTCGCAAC+TGG | 0.302291 | 2.1:-69423216 | MS.gene002590:CDS |
TGCCACTAACCGTTGGTTAC+AGG | 0.307139 | 2.1:-69423152 | MS.gene002590:CDS |
CGCAGGTCTACGACTATAGA+AGG | 0.329435 | 2.1:-69423980 | MS.gene002590:CDS |
TGCGGCTTGGTTGCAGGAAT+AGG | 0.354145 | 2.1:+69423127 | None:intergenic |
GCGGCTTGGTTGCAGGAATA+GGG | 0.357026 | 2.1:+69423128 | None:intergenic |
ATAGTTCCTATATGAGGGTT+CGG | 0.369231 | 2.1:-69423408 | MS.gene002590:CDS |
GTATGTTGCGGCTTGGTTGC+AGG | 0.370665 | 2.1:+69423121 | None:intergenic |
TCAGCTTCCAGCATGTTTAC+GGG | 0.385411 | 2.1:-69422881 | MS.gene002590:CDS |
TGTCACAGGTGTGGTTTGAT+TGG | 0.389607 | 2.1:-69423280 | MS.gene002590:CDS |
GTTCCAATCCGCTGTGCAAC+TGG | 0.392741 | 2.1:+69423178 | None:intergenic |
TAGTTCCTATATGAGGGTTC+GGG | 0.403833 | 2.1:-69423407 | MS.gene002590:CDS |
GTCACAGGTGTGGTTTGATT+GGG | 0.406258 | 2.1:-69423279 | MS.gene002590:CDS |
CAACTCAGGACACACTTTAT+CGG | 0.407301 | 2.1:+69423252 | None:intergenic |
CCATTCATAGTTCCTATATG+AGG | 0.434601 | 2.1:-69423414 | MS.gene002590:CDS |
TCTTCTAAAGGCTTATGATA+AGG | 0.440655 | 2.1:-69423455 | MS.gene002590:intron |
CTGTTATCTTCTTCTTCCAC+AGG | 0.453028 | 2.1:-69422908 | MS.gene002590:CDS |
GCAGTGGAATCATTGAATAA+AGG | 0.463581 | 2.1:+69422827 | None:intergenic |
ACGGGGCGTCAAACGGTGCT+TGG | 0.464938 | 2.1:-69422863 | MS.gene002590:CDS |
TTTGCTGCTGAAGGGGATAT+GGG | 0.478487 | 2.1:-69422731 | MS.gene002590:CDS |
AAACCAGTTGCACAGCGGAT+TGG | 0.482380 | 2.1:-69423181 | MS.gene002590:CDS |
CAATGGTAGCAGCACCTGCT+TGG | 0.483726 | 2.1:+69423095 | None:intergenic |
TTTGAACTTGATGCTGATGA+TGG | 0.484059 | 2.1:-69423229 | MS.gene002590:CDS |
TAGGATCAAGTGTTAGTCAT+GGG | 0.489826 | 2.1:-69422697 | MS.gene002590:CDS |
CAAGCAGGTGCTGCTACCAT+TGG | 0.499378 | 2.1:-69423094 | MS.gene002590:CDS |
GACATAGCTGCTGAAGGCAC+TGG | 0.500374 | 2.1:-69423067 | MS.gene002590:CDS |
GTCCTGTAACCAACGGTTAG+TGG | 0.500457 | 2.1:+69423150 | None:intergenic |
GGAGAAACATTTGCTGCTGA+AGG | 0.501019 | 2.1:-69422740 | MS.gene002590:CDS |
CCTCATATAGGAACTATGAA+TGG | 0.506570 | 2.1:+69423414 | None:intergenic |
TGGTAGCAGCACCTGCTTGG+TGG | 0.508317 | 2.1:+69423098 | None:intergenic |
AAATTTAAATATGAGAAACT+TGG | 0.508867 | 2.1:-69423310 | MS.gene002590:CDS |
AGCAGCTATGTCACGGCCAA+TGG | 0.511991 | 2.1:+69423078 | None:intergenic |
AATGCAGTGTTAGCTAGAAA+AGG | 0.514285 | 2.1:-69422962 | MS.gene002590:CDS |
CATGTTTACGGGGCGTCAAA+CGG | 0.514724 | 2.1:-69422870 | MS.gene002590:CDS |
AGGAACTATGAATGGAGTTA+CGG | 0.517846 | 2.1:+69423422 | None:intergenic |
TCATAGCAGTAAGTTGAGAC+TGG | 0.522678 | 2.1:+69423008 | None:intergenic |
TCATTGAATAAAGGAGCAGC+AGG | 0.531018 | 2.1:+69422836 | None:intergenic |
TGATGATGGTGTTCGCAACT+GGG | 0.534002 | 2.1:-69423215 | MS.gene002590:CDS |
AGCAACCCGAACCCTCATAT+AGG | 0.536429 | 2.1:+69423402 | None:intergenic |
TTGACGCCCCGTAAACATGC+TGG | 0.537551 | 2.1:+69422874 | None:intergenic |
TTCCACTGCTGACATATATG+AGG | 0.542902 | 2.1:-69422813 | MS.gene002590:CDS |
TTGGTGGGTATGTTGCGGCT+TGG | 0.543829 | 2.1:+69423114 | None:intergenic |
GAGAAACATTTGCTGCTGAA+GGG | 0.548982 | 2.1:-69422739 | MS.gene002590:CDS |
CCGCAACATACCCACCAAGC+AGG | 0.557074 | 2.1:-69423109 | MS.gene002590:CDS |
TGCCTTCAGCAGCTATGTCA+CGG | 0.557138 | 2.1:+69423071 | None:intergenic |
AGTATGCTGCCTCTTCAGAA+TGG | 0.558138 | 2.1:-69422761 | MS.gene002590:CDS |
GGTAGCAGCACCTGCTTGGT+GGG | 0.559802 | 2.1:+69423099 | None:intergenic |
CATTCATAGTTCCTATATGA+GGG | 0.563726 | 2.1:-69423413 | MS.gene002590:CDS |
GAGACTGGAGAACAAGCATT+CGG | 0.563805 | 2.1:+69423023 | None:intergenic |
AATGTTTCTCCATTCTGAAG+AGG | 0.571792 | 2.1:+69422752 | None:intergenic |
CATATATGAGGAGAATGGCT+CGG | 0.579792 | 2.1:-69422801 | MS.gene002590:CDS |
TGGCGTGTCCGTGCTACTAA+CGG | 0.584231 | 2.1:-69423349 | MS.gene002590:CDS |
GCGACAAAACATGCTGAGGA+AGG | 0.586371 | 2.1:-69424006 | None:intergenic |
ATAGGATCAAGTGTTAGTCA+TGG | 0.588462 | 2.1:-69422698 | MS.gene002590:CDS |
GCTGACATATATGAGGAGAA+TGG | 0.589878 | 2.1:-69422806 | MS.gene002590:CDS |
GAACAGCTGCCACTAACCGT+TGG | 0.593106 | 2.1:-69423159 | MS.gene002590:CDS |
GTGTTAGCTAGAAAAGGTAA+TGG | 0.593233 | 2.1:-69422956 | MS.gene002590:CDS |
AGAAACATTTGCTGCTGAAG+GGG | 0.608288 | 2.1:-69422738 | MS.gene002590:CDS |
CGTAAACATGCTGGAAGCTG+AGG | 0.609006 | 2.1:+69422883 | None:intergenic |
CGACTATAGAAGGGGAACAA+AGG | 0.610038 | 2.1:-69423970 | MS.gene002590:intron |
GCAGGTCTACGACTATAGAA+GGG | 0.610615 | 2.1:-69423979 | MS.gene002590:CDS |
GGCCGTGACATAGCTGCTGA+AGG | 0.620040 | 2.1:-69423073 | MS.gene002590:CDS |
CAAACTCTCCGTTAGTAGCA+CGG | 0.620332 | 2.1:+69423341 | None:intergenic |
CATGCTGAGGAAGGAAACGC+AGG | 0.624035 | 2.1:-69423997 | MS.gene002590:CDS |
CTCCTCATATATGTCAGCAG+TGG | 0.624189 | 2.1:+69422811 | None:intergenic |
CAGCTTCCAGCATGTTTACG+GGG | 0.630384 | 2.1:-69422880 | MS.gene002590:CDS |
GCTGGAAGCTGAGGTACCTG+TGG | 0.633738 | 2.1:+69422892 | None:intergenic |
AGGATCAAGTGTTAGTCATG+GGG | 0.635486 | 2.1:-69422696 | MS.gene002590:CDS |
GCATCAAGTTCAAACAACTC+AGG | 0.644756 | 2.1:+69423238 | None:intergenic |
CCTGCTTGGTGGGTATGTTG+CGG | 0.644912 | 2.1:+69423109 | None:intergenic |
AAAGGCGACAAAACATGCTG+AGG | 0.646771 | 2.1:-69424010 | None:intergenic |
CAGGTCTACGACTATAGAAG+GGG | 0.659949 | 2.1:-69423978 | MS.gene002590:CDS |
GGATCAAGTGTTAGTCATGG+GGG | 0.666670 | 2.1:-69422695 | MS.gene002590:CDS |
GAATAGGGTCCTGTAACCAA+CGG | 0.675018 | 2.1:+69423143 | None:intergenic |
GATGATGGTGTTCGCAACTG+GGG | 0.687202 | 2.1:-69423214 | MS.gene002590:CDS |
GATCAAGTGTTAGTCATGGG+GGG | 0.688376 | 2.1:-69422694 | MS.gene002590:CDS |
ATTTGAAACCAGTTGCACAG+CGG | 0.731294 | 2.1:-69423186 | MS.gene002590:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATAATGAAAATTAAATTGA+AGG | + | chr2.1:69422822-69422841 | None:intergenic | 10.0% |
!!! | AAACTATCATATTTTAAAAA+AGG | - | chr2.1:69423069-69423088 | MS.gene002590:CDS | 10.0% |
!!! | AACTATCATATTTTAAAAAA+GGG | - | chr2.1:69423070-69423089 | MS.gene002590:CDS | 10.0% |
!!! | TTTTTAGTTTAAAAATATGA+TGG | - | chr2.1:69423038-69423057 | MS.gene002590:CDS | 10.0% |
!! | AAATTTAAATATGAGAAACT+TGG | - | chr2.1:69423362-69423381 | MS.gene002590:CDS | 15.0% |
!! | TAGAAAATAATAATGCTTAT+AGG | - | chr2.1:69423133-69423152 | MS.gene002590:CDS | 15.0% |
!!! | ATTTTAGATCAAATATTTGA+CGG | + | chr2.1:69422893-69422912 | None:intergenic | 15.0% |
CATTCATAGTTCCTATATGA+GGG | - | chr2.1:69423259-69423278 | MS.gene002590:CDS | 30.0% | |
TAGATCAAATATTTGACGGA+GGG | + | chr2.1:69422889-69422908 | None:intergenic | 30.0% | |
TTAGATCAAATATTTGACGG+AGG | + | chr2.1:69422890-69422909 | None:intergenic | 30.0% | |
! | GATATGGGCAATTTTGTAAT+AGG | - | chr2.1:69423956-69423975 | MS.gene002590:intron | 30.0% |
! | TCTTCTAAAGGCTTATGATA+AGG | - | chr2.1:69423217-69423236 | MS.gene002590:CDS | 30.0% |
! | TTATCATAAGCCTTTAGAAG+AGG | + | chr2.1:69423218-69423237 | None:intergenic | 30.0% |
!! | GTGATATGTTTTAAATGACG+TGG | + | chr2.1:69423009-69423028 | None:intergenic | 30.0% |
AATGCAGTGTTAGCTAGAAA+AGG | - | chr2.1:69423710-69423729 | MS.gene002590:intron | 35.0% | |
AGGAACTATGAATGGAGTTA+CGG | + | chr2.1:69423253-69423272 | None:intergenic | 35.0% | |
ATAGGATCAAGTGTTAGTCA+TGG | - | chr2.1:69423974-69423993 | MS.gene002590:CDS | 35.0% | |
ATAGTTCCTATATGAGGGTT+CGG | - | chr2.1:69423264-69423283 | MS.gene002590:CDS | 35.0% | |
CCATTCATAGTTCCTATATG+AGG | - | chr2.1:69423258-69423277 | MS.gene002590:CDS | 35.0% | |
CCTCATATAGGAACTATGAA+TGG | + | chr2.1:69423261-69423280 | None:intergenic | 35.0% | |
GCAGTGGAATCATTGAATAA+AGG | + | chr2.1:69423848-69423867 | None:intergenic | 35.0% | |
GTGAGATTTGGATTTAGAAG+AGG | - | chr2.1:69422785-69422804 | MS.gene002590:CDS | 35.0% | |
GTGTTAGCTAGAAAAGGTAA+TGG | - | chr2.1:69423716-69423735 | MS.gene002590:intron | 35.0% | |
GTTGAAAAACTACATCGTAG+AGG | - | chr2.1:69422761-69422780 | MS.gene002590:CDS | 35.0% | |
TAGGATCAAGTGTTAGTCAT+GGG | - | chr2.1:69423975-69423994 | MS.gene002590:CDS | 35.0% | |
TTTGAACTTGATGCTGATGA+TGG | - | chr2.1:69423443-69423462 | MS.gene002590:CDS | 35.0% | |
! | AATGTTTCTCCATTCTGAAG+AGG | + | chr2.1:69423923-69423942 | None:intergenic | 35.0% |
! | TCTAGCTAACACTGCATTTT+GGG | + | chr2.1:69423708-69423727 | None:intergenic | 35.0% |
!! | TTCTAGCTAACACTGCATTT+TGG | + | chr2.1:69423709-69423728 | None:intergenic | 35.0% |
!!! | AACTTGGTGTATTTTGTCAC+AGG | - | chr2.1:69423378-69423397 | MS.gene002590:CDS | 35.0% |
AGGATCAAGTGTTAGTCATG+GGG | - | chr2.1:69423976-69423995 | MS.gene002590:CDS | 40.0% | |
CAACTCAGGACACACTTTAT+CGG | + | chr2.1:69423423-69423442 | None:intergenic | 40.0% | |
CATATATGAGGAGAATGGCT+CGG | - | chr2.1:69423871-69423890 | MS.gene002590:intron | 40.0% | |
CTGTTATCTTCTTCTTCCAC+AGG | - | chr2.1:69423764-69423783 | MS.gene002590:intron | 40.0% | |
GCATCAAGTTCAAACAACTC+AGG | + | chr2.1:69423437-69423456 | None:intergenic | 40.0% | |
GCTGACATATATGAGGAGAA+TGG | - | chr2.1:69423866-69423885 | MS.gene002590:intron | 40.0% | |
TAGTTCCTATATGAGGGTTC+GGG | - | chr2.1:69423265-69423284 | MS.gene002590:CDS | 40.0% | |
TCATTGAATAAAGGAGCAGC+AGG | + | chr2.1:69423839-69423858 | None:intergenic | 40.0% | |
TTCCACTGCTGACATATATG+AGG | - | chr2.1:69423859-69423878 | MS.gene002590:intron | 40.0% | |
! | AGAAACATTTGCTGCTGAAG+GGG | - | chr2.1:69423934-69423953 | MS.gene002590:intron | 40.0% |
! | ATTTGAAACCAGTTGCACAG+CGG | - | chr2.1:69423486-69423505 | MS.gene002590:intron | 40.0% |
! | GAGAAACATTTGCTGCTGAA+GGG | - | chr2.1:69423933-69423952 | MS.gene002590:intron | 40.0% |
! | TCATAGCAGTAAGTTGAGAC+TGG | + | chr2.1:69423667-69423686 | None:intergenic | 40.0% |
!! | ACGATGTAGTTTTTCAACGC+CGG | + | chr2.1:69422759-69422778 | None:intergenic | 40.0% |
AGTATGCTGCCTCTTCAGAA+TGG | - | chr2.1:69423911-69423930 | MS.gene002590:intron | 45.0% | |
CAAACTCTCCGTTAGTAGCA+CGG | + | chr2.1:69423334-69423353 | None:intergenic | 45.0% | |
CAGGTCTACGACTATAGAAG+GGG | - | chr2.1:69422694-69422713 | MS.gene002590:CDS | 45.0% | |
CGACTATAGAAGGGGAACAA+AGG | - | chr2.1:69422702-69422721 | MS.gene002590:CDS | 45.0% | |
CTCAGCTTCCAGCATGTTTA+CGG | - | chr2.1:69423790-69423809 | MS.gene002590:intron | 45.0% | |
CTCCTCATATATGTCAGCAG+TGG | + | chr2.1:69423864-69423883 | None:intergenic | 45.0% | |
GAATAGGGTCCTGTAACCAA+CGG | + | chr2.1:69423532-69423551 | None:intergenic | 45.0% | |
GAGACTGGAGAACAAGCATT+CGG | + | chr2.1:69423652-69423671 | None:intergenic | 45.0% | |
GATCAAGTGTTAGTCATGGG+GGG | - | chr2.1:69423978-69423997 | MS.gene002590:CDS | 45.0% | |
GCAGGTCTACGACTATAGAA+GGG | - | chr2.1:69422693-69422712 | MS.gene002590:CDS | 45.0% | |
GGATCAAGTGTTAGTCATGG+GGG | - | chr2.1:69423977-69423996 | MS.gene002590:CDS | 45.0% | |
GTCACAGGTGTGGTTTGATT+GGG | - | chr2.1:69423393-69423412 | MS.gene002590:CDS | 45.0% | |
TCAGCTTCCAGCATGTTTAC+GGG | - | chr2.1:69423791-69423810 | MS.gene002590:intron | 45.0% | |
TGTCACAGGTGTGGTTTGAT+TGG | - | chr2.1:69423392-69423411 | MS.gene002590:CDS | 45.0% | |
TGTTGACGCACCTCTTCTAA+AGG | - | chr2.1:69423205-69423224 | MS.gene002590:CDS | 45.0% | |
TTTGCTGCTGAAGGGGATAT+GGG | - | chr2.1:69423941-69423960 | MS.gene002590:intron | 45.0% | |
! | ATTTGCTGCTGAAGGGGATA+TGG | - | chr2.1:69423940-69423959 | MS.gene002590:intron | 45.0% |
! | CATCGTAGAGGTGTGAGATT+TGG | - | chr2.1:69422773-69422792 | MS.gene002590:CDS | 45.0% |
! | GGAGAAACATTTGCTGCTGA+AGG | - | chr2.1:69423932-69423951 | MS.gene002590:intron | 45.0% |
! | GGTGTATTTTGTCACAGGTG+TGG | - | chr2.1:69423383-69423402 | MS.gene002590:CDS | 45.0% |
!! | TGATGATGGTGTTCGCAACT+GGG | - | chr2.1:69423457-69423476 | MS.gene002590:intron | 45.0% |
!!! | ACACGCCACTCTTTTTTCAG+CGG | + | chr2.1:69423311-69423330 | None:intergenic | 45.0% |
AAACCAGTTGCACAGCGGAT+TGG | - | chr2.1:69423491-69423510 | MS.gene002590:intron | 50.0% | |
ACGAATTCTCATCGCCTCAC+CGG | - | chr2.1:69422737-69422756 | MS.gene002590:CDS | 50.0% | |
AGCAACCCGAACCCTCATAT+AGG | + | chr2.1:69423273-69423292 | None:intergenic | 50.0% | |
CAGCTTCCAGCATGTTTACG+GGG | - | chr2.1:69423792-69423811 | MS.gene002590:intron | 50.0% | |
CGCAGGTCTACGACTATAGA+AGG | - | chr2.1:69422692-69422711 | MS.gene002590:CDS | 50.0% | |
CGTAAACATGCTGGAAGCTG+AGG | + | chr2.1:69423792-69423811 | None:intergenic | 50.0% | |
CTGCTCCGCTGAAAAAAGAG+TGG | - | chr2.1:69423303-69423322 | MS.gene002590:CDS | 50.0% | |
GAAGGGGAACAAAGGTGAAG+CGG | - | chr2.1:69422710-69422729 | MS.gene002590:CDS | 50.0% | |
GTCCTGTAACCAACGGTTAG+TGG | + | chr2.1:69423525-69423544 | None:intergenic | 50.0% | |
TGCCTTCAGCAGCTATGTCA+CGG | + | chr2.1:69423604-69423623 | None:intergenic | 50.0% | |
! | CATGTTTACGGGGCGTCAAA+CGG | - | chr2.1:69423802-69423821 | MS.gene002590:intron | 50.0% |
! | GATGATGGTGTTCGCAACTG+GGG | - | chr2.1:69423458-69423477 | MS.gene002590:intron | 50.0% |
! | TGCCACTAACCGTTGGTTAC+AGG | - | chr2.1:69423520-69423539 | MS.gene002590:intron | 50.0% |
!! | CTGATGATGGTGTTCGCAAC+TGG | - | chr2.1:69423456-69423475 | MS.gene002590:intron | 50.0% |
!! | GTAGTTTTTCAACGCCGGTG+AGG | + | chr2.1:69422754-69422773 | None:intergenic | 50.0% |
AGCAGCTATGTCACGGCCAA+TGG | + | chr2.1:69423597-69423616 | None:intergenic | 55.0% | |
CAATGGTAGCAGCACCTGCT+TGG | + | chr2.1:69423580-69423599 | None:intergenic | 55.0% | |
GAACAGCTGCCACTAACCGT+TGG | - | chr2.1:69423513-69423532 | MS.gene002590:intron | 55.0% | |
GTTCCAATCCGCTGTGCAAC+TGG | + | chr2.1:69423497-69423516 | None:intergenic | 55.0% | |
TTGACGCCCCGTAAACATGC+TGG | + | chr2.1:69423801-69423820 | None:intergenic | 55.0% | |
! | CCTGCTTGGTGGGTATGTTG+CGG | + | chr2.1:69423566-69423585 | None:intergenic | 55.0% |
! | GACATAGCTGCTGAAGGCAC+TGG | - | chr2.1:69423605-69423624 | MS.gene002590:intron | 55.0% |
! | TGGCGTGTCCGTGCTACTAA+CGG | - | chr2.1:69423323-69423342 | MS.gene002590:CDS | 55.0% |
! | TTGGTGGGTATGTTGCGGCT+TGG | + | chr2.1:69423561-69423580 | None:intergenic | 55.0% |
!! | CAAGCAGGTGCTGCTACCAT+TGG | - | chr2.1:69423578-69423597 | MS.gene002590:intron | 55.0% |
!! | GCGGCTTGGTTGCAGGAATA+GGG | + | chr2.1:69423547-69423566 | None:intergenic | 55.0% |
!! | GTATGTTGCGGCTTGGTTGC+AGG | + | chr2.1:69423554-69423573 | None:intergenic | 55.0% |
!! | TGCGGCTTGGTTGCAGGAAT+AGG | + | chr2.1:69423548-69423567 | None:intergenic | 55.0% |
CCGCAACATACCCACCAAGC+AGG | - | chr2.1:69423563-69423582 | MS.gene002590:intron | 60.0% | |
GGCCGTGACATAGCTGCTGA+AGG | - | chr2.1:69423599-69423618 | MS.gene002590:intron | 60.0% | |
GGTAGCAGCACCTGCTTGGT+GGG | + | chr2.1:69423576-69423595 | None:intergenic | 60.0% | |
TGGTAGCAGCACCTGCTTGG+TGG | + | chr2.1:69423577-69423596 | None:intergenic | 60.0% | |
! | GCTGGAAGCTGAGGTACCTG+TGG | + | chr2.1:69423783-69423802 | None:intergenic | 60.0% |
! | ACGGGGCGTCAAACGGTGCT+TGG | - | chr2.1:69423809-69423828 | MS.gene002590:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 69422676 | 69424018 | 69422676 | ID=MS.gene002590 |
chr2.1 | mRNA | 69422676 | 69424018 | 69422676 | ID=MS.gene002590.t1;Parent=MS.gene002590 |
chr2.1 | exon | 69423971 | 69424018 | 69423971 | ID=MS.gene002590.t1.exon1;Parent=MS.gene002590.t1 |
chr2.1 | CDS | 69423971 | 69424018 | 69423971 | ID=cds.MS.gene002590.t1;Parent=MS.gene002590.t1 |
chr2.1 | exon | 69422676 | 69423467 | 69422676 | ID=MS.gene002590.t1.exon2;Parent=MS.gene002590.t1 |
chr2.1 | CDS | 69422676 | 69423467 | 69422676 | ID=cds.MS.gene002590.t1;Parent=MS.gene002590.t1 |
Gene Sequence |
Protein sequence |