AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69586

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69586.t1 MTR_3g053920 59.827 346 73 3 1 346 1 280 1.29e-128 376
MS.gene69586.t1 MTR_2g061500 87.597 129 16 0 1 129 1 129 1.85e-77 239
MS.gene69586.t1 MTR_4g103530 83.505 97 16 0 55 151 1 97 1.24e-54 182
MS.gene69586.t1 MTR_7g011710 68.235 85 27 0 55 139 1 85 3.50e-36 132
MS.gene69586.t1 MTR_6g033215 35.260 173 110 1 29 199 122 294 1.12e-33 129
MS.gene69586.t1 MTR_0010s0370 36.158 177 103 3 8 177 4 177 2.56e-30 117
MS.gene69586.t1 MTR_0010s0350 36.158 177 103 3 8 177 4 177 2.56e-30 117
MS.gene69586.t1 MTR_8g463110 59.322 118 46 1 289 404 1 118 4.49e-28 119
MS.gene69586.t1 MTR_8g463110 50.000 78 39 0 406 483 180 257 2.12e-17 85.9
MS.gene69586.t1 MTR_6g034215 65.385 52 18 0 418 469 196 247 7.34e-14 73.2
MS.gene69586.t1 MTR_1g036720 33.010 103 69 0 11 113 9 111 4.35e-13 66.2
MS.gene69586.t1 MTR_4g020630 55.769 52 23 0 419 470 129 180 3.14e-12 69.3
MS.gene69586.t1 MTR_1g100687 54.000 50 23 0 421 470 133 182 8.34e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69586.t1 AT2G17920 26.267 217 146 6 8 216 9 219 7.26e-18 84.7
MS.gene69586.t1 AT3G31430 27.103 214 144 6 8 215 104 311 9.34e-16 79.0
MS.gene69586.t1 AT3G57587 28.169 142 98 2 77 216 80 219 1.36e-15 79.0
MS.gene69586.t1 AT5G36228 26.154 195 136 4 36 226 39 229 6.01e-15 77.0
MS.gene69586.t1 AT2G41590 28.169 142 98 2 77 216 80 219 6.30e-15 77.0
MS.gene69586.t1 AT2G13450 27.128 188 121 4 36 215 39 218 6.57e-15 77.0
MS.gene69586.t1 AT4G02000 27.941 136 94 2 83 216 6 139 1.64e-13 72.0
MS.gene69586.t1 AT5G25200 25.683 183 132 2 36 216 39 219 1.97e-13 72.4
MS.gene69586.t1 AT5G18636 25.946 185 129 4 36 216 39 219 2.06e-13 72.4
MS.gene69586.t1 AT2G02103 26.230 183 131 2 36 216 39 219 2.32e-13 72.4
MS.gene69586.t1 AT3G47920 27.465 142 99 2 77 216 9 148 2.94e-13 70.9

Find 148 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCAACCTTATGGTGAAAT+TGG 0.236408 3.1:+34410596 None:intergenic
AGACATACGCTCGCTGAAAT+AGG 0.266771 3.1:+34410681 None:intergenic
GCTCGCTGAAATAGGCAAAT+TGG 0.281041 3.1:+34410689 None:intergenic
ATCCGCCACTGCTCGTAAAA+AGG 0.293750 3.1:-34408452 MS.gene69586:CDS
CCTAAGGTCGGTCAAGGTAT+AGG 0.311118 3.1:-34410421 MS.gene69586:CDS
TGCTACTAACCGGTGGTTAC+AGG 0.311368 3.1:-34410095 MS.gene69586:CDS
TGCTGCCCAAAATGCTGCTT+TGG 0.313789 3.1:-34409915 MS.gene69586:CDS
AGTATAGGAAATGTTGTAAT+AGG 0.327492 3.1:-34409659 MS.gene69586:CDS
TCATATCGAGTTCTGGATTC+AGG 0.340405 3.1:-34410473 MS.gene69586:CDS
GGTGACCGCCCTTTGGTGCT+CGG 0.345336 3.1:-34409806 MS.gene69586:CDS
TCATAGCGAAAATGACGTTT+AGG 0.351271 3.1:+34408811 None:intergenic
CGTTGAATCATATCGAGTTC+TGG 0.362336 3.1:-34410480 MS.gene69586:CDS
CGCGGGCAGCATCAACCTTA+TGG 0.370382 3.1:+34410587 None:intergenic
ACAACTTGTTCATCATCTAT+AGG 0.371031 3.1:+34409587 None:intergenic
CTGATGATGGAGTCCGTAGC+TGG 0.379112 3.1:-34410159 MS.gene69586:CDS
CAGGTCCATGGTTTACCGTT+TGG 0.379364 3.1:-34410454 MS.gene69586:CDS
AGGTGAGACCTTCAAGGTTC+AGG 0.380090 3.1:+34410812 None:intergenic
TATCCCAAGATGATGCATAT+TGG 0.383708 3.1:-34408537 MS.gene69586:CDS
GTAGCGATCAGCAACGGATT+TGG 0.386387 3.1:+34410624 None:intergenic
AAGCCTACATCACAAAGAAT+TGG 0.386996 3.1:-34410124 MS.gene69586:CDS
GTGACCGCCCTTTGGTGCTC+GGG 0.391871 3.1:-34409805 MS.gene69586:CDS
CTAAGGTCGGTCAAGGTATA+GGG 0.400863 3.1:-34410420 MS.gene69586:CDS
CTTGTTCCAATTTCACCATA+AGG 0.405419 3.1:-34410602 MS.gene69586:CDS
GGTGCAACATTAACAAGAAT+AGG 0.413706 3.1:+34408853 None:intergenic
TCTGCTTGGTGACCGCCCTT+TGG 0.417738 3.1:-34409813 MS.gene69586:CDS
TGATTCAACGGGACAAAACT+TGG 0.422444 3.1:+34410493 None:intergenic
TTGTTTCATAGCAGTGAGTT+GGG 0.429727 3.1:+34409946 None:intergenic
GTCGCCAATATGCATCATCT+TGG 0.435832 3.1:+34408533 None:intergenic
ACCTTCAAGGTTCAGGTTGG+TGG 0.438585 3.1:+34410819 None:intergenic
ACACGCCACTCTTGTTTCAA+TGG 0.441938 3.1:+34410307 None:intergenic
TGGCGTGTTCGTGCTACTAA+TGG 0.442394 3.1:-34410292 MS.gene69586:CDS
CCTATACCTTGACCGACCTT+AGG 0.444159 3.1:+34410421 None:intergenic
GTTCCAATTCTTTGTGATGT+AGG 0.444612 3.1:+34410121 None:intergenic
AAATGCGTGGCATCTAGAAC+CGG 0.451100 3.1:-34408788 MS.gene69586:CDS
GACCTATGAGACAGTGTTCA+AGG 0.454398 3.1:+34410734 None:intergenic
TTTGAGCTTGAATCTGATGA+TGG 0.454699 3.1:-34410172 MS.gene69586:CDS
GCGACATAGAGGCAGGAATA+GGG 0.454722 3.1:+34410071 None:intergenic
GTCCTTGAACACTGTCTCAT+AGG 0.463466 3.1:-34410736 MS.gene69586:CDS
GCAGCAGCTTTGTGAGGAGT+TGG 0.463551 3.1:+34410046 None:intergenic
CCCACCAACCTGAACCTTGA+AGG 0.465639 3.1:-34410820 MS.gene69586:CDS
GCATCTAGAACCGGGGTTCA+AGG 0.468927 3.1:-34408779 MS.gene69586:CDS
TACGACCATCATAAGATTTG+AGG 0.472133 3.1:+34410383 None:intergenic
GATTCAAGCTCAAACAAGTC+TGG 0.472786 3.1:+34410181 None:intergenic
GCAGGTAGCCCGAGCACCAA+AGG 0.473186 3.1:+34409797 None:intergenic
TTGGAACCGCTGCTACTAAC+CGG 0.473512 3.1:-34410105 MS.gene69586:CDS
TGCGACATAGAGGCAGGAAT+AGG 0.476608 3.1:+34410070 None:intergenic
TGCACCTACACCTCGGCTAC+AGG 0.477940 3.1:-34408836 MS.gene69586:CDS
CACAAAGCTGCTGCTTCTGA+TGG 0.478792 3.1:-34410037 MS.gene69586:CDS
AGGGCGGTCACCAAGCAGAC+TGG 0.480385 3.1:+34409817 None:intergenic
AGAACTCGATATGATTCAAC+GGG 0.480591 3.1:+34410482 None:intergenic
TGTCACAGGTGTGGACTGTT+GGG 0.481524 3.1:-34410223 MS.gene69586:CDS
TGGTGCTATAGGTGAAGATC+AGG 0.483633 3.1:-34408599 MS.gene69586:intron
ACAAAACTTGGAACGACACC+AGG 0.484815 3.1:+34410505 None:intergenic
CTGGTTCAGACTCAAGGTTA+AGG 0.485928 3.1:+34410770 None:intergenic
TTTGCTGCTGATGGGAGTAT+AGG 0.486659 3.1:-34409674 MS.gene69586:CDS
CAGACAAGGTGAGACCTTCA+AGG 0.488448 3.1:+34410806 None:intergenic
TGAGGTGCGGTCCCCAGCTA+CGG 0.492668 3.1:+34410146 None:intergenic
CTTGTTTCATAGCAGTGAGT+TGG 0.495849 3.1:+34409945 None:intergenic
GTGCAACATTAACAAGAATA+GGG 0.496425 3.1:+34408854 None:intergenic
GCATCAGATTCACTTGAAAA+CGG 0.497368 3.1:+34409770 None:intergenic
TGTTGTACCTGTGGAGGAAG+AGG 0.502378 3.1:+34409844 None:intergenic
GTGGTTCGGATTTGAAGAAA+AGG 0.503559 3.1:-34409730 MS.gene69586:CDS
TTGTCACAGGTGTGGACTGT+TGG 0.503879 3.1:-34410224 MS.gene69586:CDS
GTCATGGACCGTATTTCCCC+TGG 0.504442 3.1:-34410523 MS.gene69586:CDS
CTGCTGCCCTCTTCCTCCAC+AGG 0.506951 3.1:-34409851 MS.gene69586:CDS
GAACGACACCAGGGGAAATA+CGG 0.507266 3.1:+34410515 None:intergenic
TCGCCAATATGCATCATCTT+GGG 0.507860 3.1:+34408534 None:intergenic
GTTTGGCTTCATTCAACCTA+AGG 0.508373 3.1:-34410437 MS.gene69586:CDS
ACGACCATCATAAGATTTGA+GGG 0.513009 3.1:+34410384 None:intergenic
GACAACGCGCAAAGACTCAT+TGG 0.516396 3.1:-34408513 MS.gene69586:CDS
ATGTCTCGTGCATGGAAGCC+AGG 0.520191 3.1:-34410664 MS.gene69586:CDS
CTGTCTCATAGGTCGAGTCC+TGG 0.520328 3.1:-34410725 MS.gene69586:CDS
TAGGATCAAATGTTAGTCAT+GGG 0.524354 3.1:-34409640 MS.gene69586:CDS
CCTTCAAGGTTCAGGTTGGT+GGG 0.525848 3.1:+34410820 None:intergenic
ACAACAGCCTCCAGTCTGCT+TGG 0.526255 3.1:-34409827 MS.gene69586:CDS
CAAGGTATAGGGAGTTTCCT+AGG 0.536775 3.1:-34410409 MS.gene69586:CDS
TGATGATGGAGTCCGTAGCT+GGG 0.536838 3.1:-34410158 MS.gene69586:CDS
TTAACAAAATCCTTGAACCC+CGG 0.537573 3.1:+34408769 None:intergenic
CAGGTAGCCCGAGCACCAAA+GGG 0.541250 3.1:+34409798 None:intergenic
CGCAAAGACTCATTGGTACA+AGG 0.541894 3.1:-34408506 MS.gene69586:CDS
GCTGCCCGCGTTCTTGATGA+AGG 0.544526 3.1:-34410574 MS.gene69586:CDS
GGTACCCTCAAATCTTATGA+TGG 0.547388 3.1:-34410388 MS.gene69586:CDS
TGCCTTCAGCAGTGTTAGCG+CGG 0.547431 3.1:+34410014 None:intergenic
ATAGGATCAAATGTTAGTCA+TGG 0.550331 3.1:-34409641 MS.gene69586:CDS
GAAGTATCATTTGCTGCTGA+TGG 0.551082 3.1:-34409683 MS.gene69586:CDS
CATAAGATTTGAGGGTACCT+AGG 0.551893 3.1:+34410392 None:intergenic
TCACTTGAAAACGGAACAGC+AGG 0.554387 3.1:+34409779 None:intergenic
GCGTTCTTGATGAAGGTCCA+TGG 0.555957 3.1:-34410567 MS.gene69586:CDS
ATCTGATGCTGAAGTACAAG+AGG 0.556269 3.1:-34409756 MS.gene69586:CDS
AGTACAAGAGGAAAGTGGTT+CGG 0.559488 3.1:-34409744 MS.gene69586:CDS
TTCTTTGTGATGTAGGCTTG+AGG 0.561689 3.1:+34410128 None:intergenic
ATAGGGTCATGATCGGAAGC+AGG 0.563188 3.1:+34408871 None:intergenic
ATTGGATCTCGCGATCAGCC+AGG 0.565008 3.1:+34410707 None:intergenic
GTTGGCTGCGACATAGAGGC+AGG 0.568967 3.1:+34410064 None:intergenic
GAGTTCTGGATTCAGGTCCA+TGG 0.571214 3.1:-34410466 MS.gene69586:CDS
GGCCGCGCTAACACTGCTGA+AGG 0.572428 3.1:-34410016 MS.gene69586:CDS
GGCTTCATTCAACCTAAGGT+CGG 0.572612 3.1:-34410433 MS.gene69586:CDS
GGTCTCACCTTGTCTGAGGA+AGG 0.576121 3.1:-34410799 MS.gene69586:CDS
GATGATATGTATGTAACTGC+TGG 0.576587 3.1:-34409611 MS.gene69586:CDS
GATCGGAAGCAGGTGCCACA+AGG 0.577526 3.1:+34408881 None:intergenic
TAGTTCTTATATGAGACTCA+AGG 0.578476 3.1:-34410350 MS.gene69586:CDS
ACTGGAGGCTGTTGTACCTG+TGG 0.579750 3.1:+34409835 None:intergenic
AATGCGTGGCATCTAGAACC+GGG 0.581098 3.1:-34408787 MS.gene69586:CDS
AACAAGAATAGGGTCATGAT+CGG 0.586157 3.1:+34408864 None:intergenic
AGGAGTTGGCTGCGACATAG+AGG 0.587691 3.1:+34410060 None:intergenic
GCTAACACTGCTGAAGGCAA+TGG 0.591118 3.1:-34410010 MS.gene69586:CDS
ATTCAACCTAAGGTCGGTCA+AGG 0.593007 3.1:-34410427 MS.gene69586:CDS
GGAACCTGTAGCCGAGGTGT+AGG 0.594263 3.1:+34408832 None:intergenic
ATGCGTGGCATCTAGAACCG+GGG 0.598375 3.1:-34408786 MS.gene69586:CDS
TTAGGTTGAATGAAGCCAAA+CGG 0.602835 3.1:+34410439 None:intergenic
AGGTTCGTATGCTTGAGCTC+CGG 0.603826 3.1:-34408579 MS.gene69586:CDS
GTTGTACCTGTGGAGGAAGA+GGG 0.604958 3.1:+34409845 None:intergenic
TGAAGGTCTCACCTTGTCTG+AGG 0.607250 3.1:-34410803 MS.gene69586:CDS
TGAAAATTATCATAAAGCCA+TGG 0.609544 3.1:+34410550 None:intergenic
GAGACCTTCAAGGTTCAGGT+TGG 0.610025 3.1:+34410816 None:intergenic
GCGAGCGTATGTCTCGTGCA+TGG 0.610479 3.1:-34410672 MS.gene69586:CDS
GGGACTGAAAAGCCATCATA+CGG 0.611670 3.1:+34409966 None:intergenic
AAGTATCATTTGCTGCTGAT+GGG 0.618174 3.1:-34409682 MS.gene69586:CDS
CAGAACTCGATATGATTCAA+CGG 0.618989 3.1:+34410481 None:intergenic
ATCAAATGTTAGTCATGGGG+GGG 0.619233 3.1:-34409636 MS.gene69586:CDS
GAATAGGGTCCTGTAACCAC+CGG 0.619872 3.1:+34410086 None:intergenic
GATGATGGAGTCCGTAGCTG+GGG 0.622379 3.1:-34410157 MS.gene69586:CDS
AAGACTCATTGGTACAAGGA+TGG 0.626459 3.1:-34408502 MS.gene69586:CDS
GCGGTCACCAAGCAGACTGG+AGG 0.627188 3.1:+34409820 None:intergenic
CGTTTAGGAACCTGTAGCCG+AGG 0.628353 3.1:+34408826 None:intergenic
GACGAGACCTTCCTCAGACA+AGG 0.633356 3.1:+34410792 None:intergenic
TCAGAAGCAGCAGCTTTGTG+AGG 0.639965 3.1:+34410040 None:intergenic
GCTGAAGTACAAGAGGAAAG+TGG 0.644430 3.1:-34409749 MS.gene69586:CDS
AGGATCAAATGTTAGTCATG+GGG 0.645313 3.1:-34409639 MS.gene69586:CDS
GGAGGCTGTTGTACCTGTGG+AGG 0.646117 3.1:+34409838 None:intergenic
TAACCACCGGTTAGTAGCAG+CGG 0.646670 3.1:+34410099 None:intergenic
GAACAAGTAGCGATCAGCAA+CGG 0.646937 3.1:+34410618 None:intergenic
CTGTTCCATTGAAACAAGAG+TGG 0.649479 3.1:-34410312 MS.gene69586:CDS
TGGACCTTCATCAAGAACGC+GGG 0.650501 3.1:+34410570 None:intergenic
TGAAGCCAAACGGTAAACCA+TGG 0.653012 3.1:+34410449 None:intergenic
CAAATGATACTTCATTCTGA+CGG 0.654293 3.1:+34409693 None:intergenic
GGATCAAATGTTAGTCATGG+GGG 0.656706 3.1:-34409638 MS.gene69586:CDS
ATCGGAAGCAGGTGCCACAA+GGG 0.656876 3.1:+34408882 None:intergenic
TTAATGTTGCACCTACACCT+CGG 0.657578 3.1:-34408843 MS.gene69586:CDS
GATCAAATGTTAGTCATGGG+GGG 0.667402 3.1:-34409637 MS.gene69586:CDS
GAACCGCTGCTACTAACCGG+TGG 0.672959 3.1:-34410102 MS.gene69586:CDS
GTAGCCCGAGCACCAAAGGG+CGG 0.673505 3.1:+34409801 None:intergenic
ATGGACCTTCATCAAGAACG+CGG 0.680146 3.1:+34410569 None:intergenic
CAAAACTTGGAACGACACCA+GGG 0.692534 3.1:+34410506 None:intergenic
AAAACTTGGAACGACACCAG+GGG 0.701242 3.1:+34410507 None:intergenic
TGTGATGTAGGCTTGAGGTG+CGG 0.713261 3.1:+34410133 None:intergenic
TGCTACTGTTGAGACCCTTG+TGG 0.717964 3.1:-34408896 MS.gene69586:intron
ACTGTTGGGACATACTGACA+AGG 0.820852 3.1:-34410209 MS.gene69586:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACCTTTAAATATGAAAAACT+TGG - chr3.1:34409022-34409041 MS.gene69586:intron 20.0%
!! TAACAATTTCAACAGTAATA+TGG + chr3.1:34410007-34410026 None:intergenic 20.0%
!!! ACCAAGTTTTTCATATTTAA+AGG + chr3.1:34409026-34409045 None:intergenic 20.0%
!!! AGGATTTTGTTAATAATTCT+TGG - chr3.1:34410516-34410535 MS.gene69586:CDS 20.0%
!!! TGATAATTTTCATATTGTCA+TGG - chr3.1:34408736-34408755 MS.gene69586:intron 20.0%
! AGTATAGGAAATGTTGTAAT+AGG - chr3.1:34409616-34409635 MS.gene69586:CDS 25.0%
! TGAAAATTATCATAAAGCCA+TGG + chr3.1:34408728-34408747 None:intergenic 25.0%
!! TTTTGTTAATAATTCTTGGC+AGG - chr3.1:34410520-34410539 MS.gene69586:CDS 25.0%
!!! GGAGTTCTTCAATTTTATTT+CGG + chr3.1:34409869-34409888 None:intergenic 25.0%
AATCGTAACCAAGCAAAAAA+CGG + chr3.1:34409890-34409909 None:intergenic 30.0%
AGATGATGAACAAGTTGTAA+TGG - chr3.1:34409693-34409712 MS.gene69586:CDS 30.0%
ATAGGATCAAATGTTAGTCA+TGG - chr3.1:34409634-34409653 MS.gene69586:CDS 30.0%
ATTAGGATAGCCATAATAGT+CGG + chr3.1:34410057-34410076 None:intergenic 30.0%
CAAATGATACTTCATTCTGA+CGG + chr3.1:34409585-34409604 None:intergenic 30.0%
GAAATTGTTAACAACACTCT+GGG - chr3.1:34410017-34410036 MS.gene69586:CDS 30.0%
GTGCAACATTAACAAGAATA+GGG + chr3.1:34410424-34410443 None:intergenic 30.0%
TACACTTGGTTTAAAAGTCT+TGG - chr3.1:34410284-34410303 MS.gene69586:CDS 30.0%
TAGGATCAAATGTTAGTCAT+GGG - chr3.1:34409635-34409654 MS.gene69586:CDS 30.0%
TAGTTCTTATATGAGACTCA+AGG - chr3.1:34408925-34408944 MS.gene69586:intron 30.0%
TCCAAAATTATCTTCATGTG+CGG - chr3.1:34410565-34410584 MS.gene69586:CDS 30.0%
TGAAATTGTTAACAACACTC+TGG - chr3.1:34410016-34410035 MS.gene69586:CDS 30.0%
TTTAGATGCAAGTGAGAAAA+GGG - chr3.1:34410169-34410188 MS.gene69586:CDS 30.0%
! AAATTTTCATGACCGTATGA+TGG - chr3.1:34409297-34409316 MS.gene69586:intron 30.0%
! ACAACTTGTTCATCATCTAT+AGG + chr3.1:34409691-34409710 None:intergenic 30.0%
! AGACTTTTAAACCAAGTGTA+CGG + chr3.1:34410284-34410303 None:intergenic 30.0%
! ATAAACGTTGCATTCTTTTC+CGG + chr3.1:34410718-34410737 None:intergenic 30.0%
! TTTTAGATGCAAGTGAGAAA+AGG - chr3.1:34410168-34410187 MS.gene69586:CDS 30.0%
!!! AACTTGGTATTTTTTGTCAC+AGG - chr3.1:34409038-34409057 MS.gene69586:intron 30.0%
AAAATTATCTTCATGTGCGG+AGG - chr3.1:34410568-34410587 MS.gene69586:CDS 35.0%
AACAAGAATAGGGTCATGAT+CGG + chr3.1:34410414-34410433 None:intergenic 35.0%
AAGCCTACATCACAAAGAAT+TGG - chr3.1:34409151-34409170 MS.gene69586:intron 35.0%
ACGACCATCATAAGATTTGA+GGG + chr3.1:34408894-34408913 None:intergenic 35.0%
AGAACTCGATATGATTCAAC+GGG + chr3.1:34408796-34408815 None:intergenic 35.0%
AGGATCAAATGTTAGTCATG+GGG - chr3.1:34409636-34409655 MS.gene69586:CDS 35.0%
CAGAACTCGATATGATTCAA+CGG + chr3.1:34408797-34408816 None:intergenic 35.0%
CATCAACCTTATGGTGAAAT+TGG + chr3.1:34408682-34408701 None:intergenic 35.0%
CTTGTTCCAATTTCACCATA+AGG - chr3.1:34408673-34408692 MS.gene69586:intron 35.0%
GACTATTATGGCTATCCTAA+TGG - chr3.1:34410056-34410075 MS.gene69586:CDS 35.0%
GATGATATGTATGTAACTGC+TGG - chr3.1:34409664-34409683 MS.gene69586:CDS 35.0%
GCAGACAATTACAAAACACA+CGG - chr3.1:34410651-34410670 MS.gene69586:CDS 35.0%
GCATCAGATTCACTTGAAAA+CGG + chr3.1:34409508-34409527 None:intergenic 35.0%
GCTTTGGCTAAAAAAGGTAA+TGG - chr3.1:34409376-34409395 MS.gene69586:intron 35.0%
GGTGCAACATTAACAAGAAT+AGG + chr3.1:34410425-34410444 None:intergenic 35.0%
GTGCTCTTGCAAATGATTTA+TGG - chr3.1:34410339-34410358 MS.gene69586:CDS 35.0%
GTGTCTCACTTAGGAATAAA+AGG + chr3.1:34409839-34409858 None:intergenic 35.0%
GTTCCAATTCTTTGTGATGT+AGG + chr3.1:34409157-34409176 None:intergenic 35.0%
TACGACCATCATAAGATTTG+AGG + chr3.1:34408895-34408914 None:intergenic 35.0%
TATCCCAAGATGATGCATAT+TGG - chr3.1:34410738-34410757 MS.gene69586:CDS 35.0%
TATTATGGCTATCCTAATGG+AGG - chr3.1:34410059-34410078 MS.gene69586:CDS 35.0%
TCACTTAGGAATAAAAGGTC+CGG + chr3.1:34409834-34409853 None:intergenic 35.0%
TCATAGCGAAAATGACGTTT+AGG + chr3.1:34410467-34410486 None:intergenic 35.0%
TTAACAAAATCCTTGAACCC+CGG + chr3.1:34410509-34410528 None:intergenic 35.0%
TTAACAACACTCTGGGTAAT+TGG - chr3.1:34410024-34410043 MS.gene69586:CDS 35.0%
TTAGATGCAAGTGAGAAAAG+GGG - chr3.1:34410170-34410189 MS.gene69586:CDS 35.0%
TTGTCGAAGAAAATTCCAAG+CGG + chr3.1:34410096-34410115 None:intergenic 35.0%
TTGTTTCATAGCAGTGAGTT+GGG + chr3.1:34409332-34409351 None:intergenic 35.0%
TTTGAGCTTGAATCTGATGA+TGG - chr3.1:34409103-34409122 MS.gene69586:intron 35.0%
! AAGTATCATTTGCTGCTGAT+GGG - chr3.1:34409593-34409612 MS.gene69586:CDS 35.0%
! ATTTTCGCTATGAAAATGCG+TGG - chr3.1:34410474-34410493 MS.gene69586:CDS 35.0%
! CAACTGTCTTCTCAATTTTC+AGG - chr3.1:34410113-34410132 MS.gene69586:CDS 35.0%
! GTGTGTTTTGTAATTGTCTG+CGG + chr3.1:34410652-34410671 None:intergenic 35.0%
! TCCGCACATGAAGATAATTT+TGG + chr3.1:34410569-34410588 None:intergenic 35.0%
! TTTAGCCAAAGCAGCATTTT+GGG + chr3.1:34409368-34409387 None:intergenic 35.0%
! TTTTAGCCAAAGCAGCATTT+TGG + chr3.1:34409369-34409388 None:intergenic 35.0%
!! AATGCTGCTTTGGCTAAAAA+AGG - chr3.1:34409370-34409389 MS.gene69586:intron 35.0%
!! TTAGGTTGAATGAAGCCAAA+CGG + chr3.1:34408839-34408858 None:intergenic 35.0%
AAATCTCCTAAGATGCACCA+TGG + chr3.1:34410140-34410159 None:intergenic 40.0%
AAGACTCATTGGTACAAGGA+TGG - chr3.1:34410773-34410792 MS.gene69586:CDS 40.0%
AAGCCATTGATAAGCCATTG+GGG + chr3.1:34410209-34410228 None:intergenic 40.0%
AGTACAAGAGGAAAGTGGTT+CGG - chr3.1:34409531-34409550 MS.gene69586:intron 40.0%
ATCAAATGTTAGTCATGGGG+GGG - chr3.1:34409639-34409658 MS.gene69586:CDS 40.0%
ATCTGATGCTGAAGTACAAG+AGG - chr3.1:34409519-34409538 MS.gene69586:intron 40.0%
CAATTACAAAACACACGGCT+TGG - chr3.1:34410656-34410675 MS.gene69586:CDS 40.0%
CCAAAATAAAGCTAAACCCC+CGG + chr3.1:34409943-34409962 None:intergenic 40.0%
CGTTGAATCATATCGAGTTC+TGG - chr3.1:34408795-34408814 MS.gene69586:CDS 40.0%
CTGTTCCATTGAAACAAGAG+TGG - chr3.1:34408963-34408982 MS.gene69586:intron 40.0%
CTTGTTTCATAGCAGTGAGT+TGG + chr3.1:34409333-34409352 None:intergenic 40.0%
GAAGCCATTGATAAGCCATT+GGG + chr3.1:34410210-34410229 None:intergenic 40.0%
GATCAAATGTTAGTCATGGG+GGG - chr3.1:34409638-34409657 MS.gene69586:CDS 40.0%
GATGAACAAGTTGTAATGGC+AGG - chr3.1:34409697-34409716 MS.gene69586:CDS 40.0%
GATTCAAGCTCAAACAAGTC+TGG + chr3.1:34409097-34409116 None:intergenic 40.0%
GGATCAAATGTTAGTCATGG+GGG - chr3.1:34409637-34409656 MS.gene69586:CDS 40.0%
GGTACCCTCAAATCTTATGA+TGG - chr3.1:34408887-34408906 MS.gene69586:intron 40.0%
TCGCCAATATGCATCATCTT+GGG + chr3.1:34410744-34410763 None:intergenic 40.0%
TGATTCAACGGGACAAAACT+TGG + chr3.1:34408785-34408804 None:intergenic 40.0%
TTAATGTTGCACCTACACCT+CGG - chr3.1:34410432-34410451 MS.gene69586:CDS 40.0%
TTCTTTGTGATGTAGGCTTG+AGG + chr3.1:34409150-34409169 None:intergenic 40.0%
! GAAGTATCATTTGCTGCTGA+TGG - chr3.1:34409592-34409611 MS.gene69586:CDS 40.0%
! GACGAAATTTAAGACCCCAA+TGG - chr3.1:34410192-34410211 MS.gene69586:CDS 40.0%
! GTGGTTCGGATTTGAAGAAA+AGG - chr3.1:34409545-34409564 MS.gene69586:intron 40.0%
! GTTTGGCTTCATTCAACCTA+AGG - chr3.1:34408838-34408857 MS.gene69586:CDS 40.0%
!! CATAAGATTTGAGGGTACCT+AGG + chr3.1:34408886-34408905 None:intergenic 40.0%
!! TCATATCGAGTTCTGGATTC+AGG - chr3.1:34408802-34408821 MS.gene69586:CDS 40.0%
!!! CTTCTCAATTTTCAGGTCCA+TGG - chr3.1:34410120-34410139 MS.gene69586:CDS 40.0%
!!! GAAGAACTCCGTTTTTTGCT+TGG - chr3.1:34409879-34409898 MS.gene69586:CDS 40.0%
!!! GGTATTTTTTGTCACAGGTG+TGG - chr3.1:34409043-34409062 MS.gene69586:intron 40.0%
AAAACTTGGAACGACACCAG+GGG + chr3.1:34408771-34408790 None:intergenic 45.0%
ACAAAACTTGGAACGACACC+AGG + chr3.1:34408773-34408792 None:intergenic 45.0%
ACTGTTGGGACATACTGACA+AGG - chr3.1:34409066-34409085 MS.gene69586:intron 45.0%
AGACATACGCTCGCTGAAAT+AGG + chr3.1:34408597-34408616 None:intergenic 45.0%
AGACCCCAATGGCTTATCAA+TGG - chr3.1:34410203-34410222 MS.gene69586:CDS 45.0%
ATGGACCTTCATCAAGAACG+CGG + chr3.1:34408709-34408728 None:intergenic 45.0%
ATTCAACCTAAGGTCGGTCA+AGG - chr3.1:34408848-34408867 MS.gene69586:CDS 45.0%
CAAAACTTGGAACGACACCA+GGG + chr3.1:34408772-34408791 None:intergenic 45.0%
CAAGGTATAGGGAGTTTCCT+AGG - chr3.1:34408866-34408885 MS.gene69586:CDS 45.0%
CCGACCTTAAATACCTAGTC+CGG - chr3.1:34409799-34409818 MS.gene69586:CDS 45.0%
CGCAAAGACTCATTGGTACA+AGG - chr3.1:34410769-34410788 MS.gene69586:CDS 45.0%
CTAAGGTCGGTCAAGGTATA+GGG - chr3.1:34408855-34408874 MS.gene69586:CDS 45.0%
CTGAATCAAGAACCGCTTGA+CGG + chr3.1:34410232-34410251 None:intergenic 45.0%
CTGGTTCAGACTCAAGGTTA+AGG + chr3.1:34408508-34408527 None:intergenic 45.0%
GAACAAGTAGCGATCAGCAA+CGG + chr3.1:34408660-34408679 None:intergenic 45.0%
GACCTATGAGACAGTGTTCA+AGG + chr3.1:34408544-34408563 None:intergenic 45.0%
GCTACTAGACTCATTCACCT+AGG + chr3.1:34409741-34409760 None:intergenic 45.0%
GCTCGCTGAAATAGGCAAAT+TGG + chr3.1:34408589-34408608 None:intergenic 45.0%
GCTGAAGTACAAGAGGAAAG+TGG - chr3.1:34409526-34409545 MS.gene69586:intron 45.0%
GGAAGCCATTGATAAGCCAT+TGG + chr3.1:34410211-34410230 None:intergenic 45.0%
GGCTTCATTCAACCTAAGGT+CGG - chr3.1:34408842-34408861 MS.gene69586:CDS 45.0%
GGGACTGAAAAGCCATCATA+CGG + chr3.1:34409312-34409331 None:intergenic 45.0%
GGTGAATGAGTCTAGTAGCT+TGG - chr3.1:34409742-34409761 MS.gene69586:CDS 45.0%
GTCCTTGAACACTGTCTCAT+AGG - chr3.1:34408539-34408558 MS.gene69586:CDS 45.0%
GTCGCCAATATGCATCATCT+TGG + chr3.1:34410745-34410764 None:intergenic 45.0%
GTCTAGTAGCTTGGAATTGC+CGG - chr3.1:34409751-34409770 MS.gene69586:CDS 45.0%
TATCAATGGCTTCCGTCAAG+CGG - chr3.1:34410217-34410236 MS.gene69586:CDS 45.0%
TCACTTGAAAACGGAACAGC+AGG + chr3.1:34409499-34409518 None:intergenic 45.0%
TCTAGTAGCTTGGAATTGCC+GGG - chr3.1:34409752-34409771 MS.gene69586:CDS 45.0%
TGAAGCCAAACGGTAAACCA+TGG + chr3.1:34408829-34408848 None:intergenic 45.0%
TTAAGGTCGGGAATTGCACT+CGG + chr3.1:34409789-34409808 None:intergenic 45.0%
! AAATGCGTGGCATCTAGAAC+CGG - chr3.1:34410487-34410506 MS.gene69586:CDS 45.0%
! ACACGCCACTCTTGTTTCAA+TGG + chr3.1:34408971-34408990 None:intergenic 45.0%
! AGTGCCGGACTAGGTATTTA+AGG + chr3.1:34409806-34409825 None:intergenic 45.0%
! CCGGACTAGGTATTTAAGGT+CGG + chr3.1:34409802-34409821 None:intergenic 45.0%
! CGGACTAGGTATTTAAGGTC+GGG + chr3.1:34409801-34409820 None:intergenic 45.0%
! GTGATCGTGACATTTTTGCC+TGG + chr3.1:34408632-34408651 None:intergenic 45.0%
! TACCTTTTTACGAGCAGTGG+CGG + chr3.1:34410828-34410847 None:intergenic 45.0%
! TGTTTTCATGTAGACCGCAC+CGG - chr3.1:34409912-34409931 MS.gene69586:CDS 45.0%
! TTTGCTGCTGATGGGAGTAT+AGG - chr3.1:34409601-34409620 MS.gene69586:CDS 45.0%
!! TGGTGCTATAGGTGAAGATC+AGG - chr3.1:34410676-34410695 MS.gene69586:CDS 45.0%
!!! CCGGGGGTTTAGCTTTATTT+TGG - chr3.1:34409940-34409959 MS.gene69586:CDS 45.0%
!!! CGTTTTCTGGTTCAGACTCA+AGG + chr3.1:34408514-34408533 None:intergenic 45.0%
AAAGGTCCGGATTGAAGTGC+CGG + chr3.1:34409821-34409840 None:intergenic 50.0%
AATGGCAGGTCCTGATGATC+AGG - chr3.1:34409711-34409730 MS.gene69586:CDS 50.0%
AGGGTCTCAACAGTAGCATG+CGG + chr3.1:34410377-34410396 None:intergenic 50.0%
AGGTGAGACCTTCAAGGTTC+AGG + chr3.1:34408466-34408485 None:intergenic 50.0%
AGGTTCGTATGCTTGAGCTC+CGG - chr3.1:34410696-34410715 MS.gene69586:CDS 50.0%
ATAGCCTTCGACTGGAACGT+CGG + chr3.1:34410261-34410280 None:intergenic 50.0%
ATAGGGTCATGATCGGAAGC+AGG + chr3.1:34410407-34410426 None:intergenic 50.0%
ATCCGCCACTGCTCGTAAAA+AGG - chr3.1:34410823-34410842 MS.gene69586:CDS 50.0%
CAGACAAGGTGAGACCTTCA+AGG + chr3.1:34408472-34408491 None:intergenic 50.0%
CAGGTCCATGGTTTACCGTT+TGG - chr3.1:34408821-34408840 MS.gene69586:CDS 50.0%
CCTAAGGTCGGTCAAGGTAT+AGG - chr3.1:34408854-34408873 MS.gene69586:CDS 50.0%
CCTATACCTTGACCGACCTT+AGG + chr3.1:34408857-34408876 None:intergenic 50.0%
CGTCAAGCGGTTCTTGATTC+AGG - chr3.1:34410230-34410249 MS.gene69586:CDS 50.0%
CTAGACTCATTCACCTAGGC+AGG + chr3.1:34409737-34409756 None:intergenic 50.0%
CTAGTAGCTTGGAATTGCCG+GGG - chr3.1:34409753-34409772 MS.gene69586:CDS 50.0%
GAACGACACCAGGGGAAATA+CGG + chr3.1:34408763-34408782 None:intergenic 50.0%
GAATAGGGTCCTGTAACCAC+CGG + chr3.1:34409192-34409211 None:intergenic 50.0%
GACAACGCGCAAAGACTCAT+TGG - chr3.1:34410762-34410781 MS.gene69586:CDS 50.0%
GAGACCTTCAAGGTTCAGGT+TGG + chr3.1:34408462-34408481 None:intergenic 50.0%
GCGACATAGAGGCAGGAATA+GGG + chr3.1:34409207-34409226 None:intergenic 50.0%
GCGTTCTTGATGAAGGTCCA+TGG - chr3.1:34408708-34408727 MS.gene69586:intron 50.0%
GCTAACACTGCTGAAGGCAA+TGG - chr3.1:34409265-34409284 MS.gene69586:intron 50.0%
GCTGATCTACGACCTCCATT+AGG + chr3.1:34410074-34410093 None:intergenic 50.0%
GGTGAGCTAGTGTCTCACTT+AGG + chr3.1:34409848-34409867 None:intergenic 50.0%
GTTGTACCTGTGGAGGAAGA+GGG + chr3.1:34409433-34409452 None:intergenic 50.0%
TAAGGTCGGGAATTGCACTC+GGG + chr3.1:34409788-34409807 None:intergenic 50.0%
TCAGGTCCATGGTGCATCTT+AGG - chr3.1:34410131-34410150 MS.gene69586:CDS 50.0%
TCGAAGGCTATCCGTACACT+TGG - chr3.1:34410270-34410289 MS.gene69586:CDS 50.0%
TGAAGGTCTCACCTTGTCTG+AGG - chr3.1:34408472-34408491 MS.gene69586:CDS 50.0%
TGCGACATAGAGGCAGGAAT+AGG + chr3.1:34409208-34409227 None:intergenic 50.0%
TGCTACTAACCGGTGGTTAC+AGG - chr3.1:34409180-34409199 MS.gene69586:intron 50.0%
TGCTACTGTTGAGACCCTTG+TGG - chr3.1:34410379-34410398 MS.gene69586:CDS 50.0%
TGGACCTTCATCAAGAACGC+GGG + chr3.1:34408708-34408727 None:intergenic 50.0%
TGTGATGTAGGCTTGAGGTG+CGG + chr3.1:34409145-34409164 None:intergenic 50.0%
TGTTGTACCTGTGGAGGAAG+AGG + chr3.1:34409434-34409453 None:intergenic 50.0%
TTATCCGACGTTCCAGTCGA+AGG - chr3.1:34410254-34410273 MS.gene69586:CDS 50.0%
TTCATGTGCGGAGGACATGT+GGG - chr3.1:34410577-34410596 MS.gene69586:CDS 50.0%
TTGGAACCGCTGCTACTAAC+CGG - chr3.1:34409170-34409189 MS.gene69586:intron 50.0%
! AATGCGTGGCATCTAGAACC+GGG - chr3.1:34410488-34410507 MS.gene69586:CDS 50.0%
! CACAAAGCTGCTGCTTCTGA+TGG - chr3.1:34409238-34409257 MS.gene69586:intron 50.0%
! GTAGCGATCAGCAACGGATT+TGG + chr3.1:34408654-34408673 None:intergenic 50.0%
! TAACCACCGGTTAGTAGCAG+CGG + chr3.1:34409179-34409198 None:intergenic 50.0%
! TCAAGGACAGCAGCGTTTTC+TGG + chr3.1:34408527-34408546 None:intergenic 50.0%
! TCAGAAGCAGCAGCTTTGTG+AGG + chr3.1:34409238-34409257 None:intergenic 50.0%
! TGCTGCCCAAAATGCTGCTT+TGG - chr3.1:34409360-34409379 MS.gene69586:intron 50.0%
! TGGCGCGTTACCGACTATTA+TGG - chr3.1:34410044-34410063 MS.gene69586:CDS 50.0%
! TGGCGTGTTCGTGCTACTAA+TGG - chr3.1:34408983-34409002 MS.gene69586:intron 50.0%
! TGTCACAGGTGTGGACTGTT+GGG - chr3.1:34409052-34409071 MS.gene69586:intron 50.0%
! TTGTCACAGGTGTGGACTGT+TGG - chr3.1:34409051-34409070 MS.gene69586:intron 50.0%
!! AACACACGGCTTGGTGCTAT+AGG - chr3.1:34410665-34410684 MS.gene69586:CDS 50.0%
!! ACCTTCAAGGTTCAGGTTGG+TGG + chr3.1:34408459-34408478 None:intergenic 50.0%
!! CCTTCAAGGTTCAGGTTGGT+GGG + chr3.1:34408458-34408477 None:intergenic 50.0%
!! GAGTTCTGGATTCAGGTCCA+TGG - chr3.1:34408809-34408828 MS.gene69586:CDS 50.0%
!! TGATGATGGAGTCCGTAGCT+GGG - chr3.1:34409117-34409136 MS.gene69586:intron 50.0%
AACCTCTCTTCCACTGCACG+TGG + chr3.1:34410314-34410333 None:intergenic 55.0%
ACAACAGCCTCCAGTCTGCT+TGG - chr3.1:34409448-34409467 MS.gene69586:intron 55.0%
ACTGGAGGCTGTTGTACCTG+TGG + chr3.1:34409443-34409462 None:intergenic 55.0%
AGCTAAACCCCCGGATCTAC+CGG + chr3.1:34409934-34409953 None:intergenic 55.0%
AGGAGTTGGCTGCGACATAG+AGG + chr3.1:34409218-34409237 None:intergenic 55.0%
ATGTCTCGTGCATGGAAGCC+AGG - chr3.1:34408611-34408630 MS.gene69586:intron 55.0%
ATTGGATCTCGCGATCAGCC+AGG + chr3.1:34408571-34408590 None:intergenic 55.0%
CCCACCAACCTGAACCTTGA+AGG - chr3.1:34408455-34408474 MS.gene69586:CDS 55.0%
CCTAGTCCGGCACTTCAATC+CGG - chr3.1:34409812-34409831 MS.gene69586:CDS 55.0%
CGTTTAGGAACCTGTAGCCG+AGG + chr3.1:34410452-34410471 None:intergenic 55.0%
CTGTCTCATAGGTCGAGTCC+TGG - chr3.1:34408550-34408569 MS.gene69586:CDS 55.0%
CTTCATGTGCGGAGGACATG+TGG - chr3.1:34410576-34410595 MS.gene69586:CDS 55.0%
GACGAGACCTTCCTCAGACA+AGG + chr3.1:34408486-34408505 None:intergenic 55.0%
GGGTCTCAACAGTAGCATGC+GGG + chr3.1:34410376-34410395 None:intergenic 55.0%
GGTCTCACCTTGTCTGAGGA+AGG - chr3.1:34408476-34408495 MS.gene69586:CDS 55.0%
GTCATGGACCGTATTTCCCC+TGG - chr3.1:34408752-34408771 MS.gene69586:intron 55.0%
GTGTACGGATAGCCTTCGAC+TGG + chr3.1:34410269-34410288 None:intergenic 55.0%
TCTTGGTACTCCACGTGCAG+TGG - chr3.1:34410301-34410320 MS.gene69586:CDS 55.0%
TGCCTTCAGCAGTGTTAGCG+CGG + chr3.1:34409264-34409283 None:intergenic 55.0%
! ATCGGAAGCAGGTGCCACAA+GGG + chr3.1:34410396-34410415 None:intergenic 55.0%
! ATGCGTGGCATCTAGAACCG+GGG - chr3.1:34410489-34410508 MS.gene69586:CDS 55.0%
! GCAGCAGCTTTGTGAGGAGT+TGG + chr3.1:34409232-34409251 None:intergenic 55.0%
! GCATCTAGAACCGGGGTTCA+AGG - chr3.1:34410496-34410515 MS.gene69586:CDS 55.0%
!! CTGATGATGGAGTCCGTAGC+TGG - chr3.1:34409116-34409135 MS.gene69586:intron 55.0%
!! GATGATGGAGTCCGTAGCTG+GGG - chr3.1:34409118-34409137 MS.gene69586:intron 55.0%
CAGGTAGCCCGAGCACCAAA+GGG + chr3.1:34409480-34409499 None:intergenic 60.0%
CCTAGGCAGGCCTGATCATC+AGG + chr3.1:34409724-34409743 None:intergenic 60.0%
CCTGATGATCAGGCCTGCCT+AGG - chr3.1:34409721-34409740 MS.gene69586:CDS 60.0%
CGCGGGCAGCATCAACCTTA+TGG + chr3.1:34408691-34408710 None:intergenic 60.0%
CTCCACGTGCAGTGGAAGAG+AGG - chr3.1:34410309-34410328 MS.gene69586:CDS 60.0%
GAACCGCTGCTACTAACCGG+TGG - chr3.1:34409173-34409192 MS.gene69586:intron 60.0%
GAGGTCGTAGATCAGCCGCT+TGG - chr3.1:34410078-34410097 MS.gene69586:CDS 60.0%
GCGAGCGTATGTCTCGTGCA+TGG - chr3.1:34408603-34408622 MS.gene69586:intron 60.0%
GCTGCCCGCGTTCTTGATGA+AGG - chr3.1:34408701-34408720 MS.gene69586:intron 60.0%
GCTTGGAATTGCCGGGGTGT+AGG - chr3.1:34409759-34409778 MS.gene69586:CDS 60.0%
GGAACCTGTAGCCGAGGTGT+AGG + chr3.1:34410446-34410465 None:intergenic 60.0%
GGAGGCTGTTGTACCTGTGG+AGG + chr3.1:34409440-34409459 None:intergenic 60.0%
GTTGGCTGCGACATAGAGGC+AGG + chr3.1:34409214-34409233 None:intergenic 60.0%
TGCACCTACACCTCGGCTAC+AGG - chr3.1:34410439-34410458 MS.gene69586:CDS 60.0%
! GATCGGAAGCAGGTGCCACA+AGG + chr3.1:34410397-34410416 None:intergenic 60.0%
! GTAGACCGCACCGGTAGATC+CGG - chr3.1:34409921-34409940 MS.gene69586:CDS 60.0%
! TAGACCGCACCGGTAGATCC+GGG - chr3.1:34409922-34409941 MS.gene69586:CDS 60.0%
! TCTGCTTGGTGACCGCCCTT+TGG - chr3.1:34409462-34409481 MS.gene69586:intron 60.0%
!! CCGGATTGAAGTGCCGGACT+AGG + chr3.1:34409815-34409834 None:intergenic 60.0%
AACCCCCGGATCTACCGGTG+CGG + chr3.1:34409929-34409948 None:intergenic 65.0%
AGGGCGGTCACCAAGCAGAC+TGG + chr3.1:34409461-34409480 None:intergenic 65.0%
CACTCGGGCTACCTACACCC+CGG + chr3.1:34409773-34409792 None:intergenic 65.0%
CTGCTGCCCTCTTCCTCCAC+AGG - chr3.1:34409424-34409443 MS.gene69586:intron 65.0%
GCAGGTAGCCCGAGCACCAA+AGG + chr3.1:34409481-34409500 None:intergenic 65.0%
GCGGTCACCAAGCAGACTGG+AGG + chr3.1:34409458-34409477 None:intergenic 65.0%
GGCCGCGCTAACACTGCTGA+AGG - chr3.1:34409259-34409278 MS.gene69586:intron 65.0%
GTAGCCCGAGCACCAAAGGG+CGG + chr3.1:34409477-34409496 None:intergenic 65.0%
TGAGGTGCGGTCCCCAGCTA+CGG + chr3.1:34409132-34409151 None:intergenic 65.0%
! AGACCGCACCGGTAGATCCG+GGG - chr3.1:34409923-34409942 MS.gene69586:CDS 65.0%
!! GGTGACCGCCCTTTGGTGCT+CGG - chr3.1:34409469-34409488 MS.gene69586:intron 65.0%
!! GTGACCGCCCTTTGGTGCTC+GGG - chr3.1:34409470-34409489 MS.gene69586:intron 65.0%
GTGCGGAGGACATGTGGGCG+TGG - chr3.1:34410582-34410601 MS.gene69586:CDS 70.0%
! GACCGCACCGGTAGATCCGG+GGG - chr3.1:34409924-34409943 MS.gene69586:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 34408449 34410848 34408449 ID=MS.gene69586
chr3.1 mRNA 34408449 34410848 34408449 ID=MS.gene69586.t1;Parent=MS.gene69586
chr3.1 exon 34409592 34410848 34409592 ID=MS.gene69586.t1.exon1;Parent=MS.gene69586.t1
chr3.1 CDS 34409592 34410848 34409592 ID=cds.MS.gene69586.t1;Parent=MS.gene69586.t1
chr3.1 exon 34408756 34408905 34408756 ID=MS.gene69586.t1.exon2;Parent=MS.gene69586.t1
chr3.1 CDS 34408756 34408905 34408756 ID=cds.MS.gene69586.t1;Parent=MS.gene69586.t1
chr3.1 exon 34408449 34408610 34408449 ID=MS.gene69586.t1.exon3;Parent=MS.gene69586.t1
chr3.1 CDS 34408449 34408610 34408449 ID=cds.MS.gene69586.t1;Parent=MS.gene69586.t1
Gene Sequence

>MS.gene69586

ATGGATCCCACCAACCTGAACCTTGAAGGTCTCACCTTGTCTGAGGAAGGTCTCGTCCTTAACCTTGAGTCTGAACCAGAAAACGCTGCTGTCCTTGAACACTGTCTCATAGGTCGAGTCCTGGCTGATCGCGAGATCCAATTTGCCTATTTCAGCGAGCGTATGTCTCGTGCATGGAAGCCAGGCAAAAATGTCACGATCACCAAATCCGTTGCTGATCGCTACTTGTTCCAATTTCACCATAAGGTTGATGCTGCCCGCGTTCTTGATGAAGGTCCATGGCTTTATGATAATTTTCATATTGTCATGGACCGTATTTCCCCTGGTGTCGTTCCAAGTTTTGTCCCGTTGAATCATATCGAGTTCTGGATTCAGGTCCATGGTTTACCGTTTGGCTTCATTCAACCTAAGGTCGGTCAAGGTATAGGGAGTTTCCTAGGTACCCTCAAATCTTATGATGGTCGTAACACTATTCATAGTTCTTATATGAGACTCAAGGTTGCTATCGACGTCACTGTTCCATTGAAACAAGAGTGGCGTGTTCGTGCTACTAATGGCGAATTTGTTACTGTAACCTTTAAATATGAAAAACTTGGTATTTTTTGTCACAGGTGTGGACTGTTGGGACATACTGACAAGGTGTGTCCAGACTTGTTTGAGCTTGAATCTGATGATGGAGTCCGTAGCTGGGGACCGCACCTCAAGCCTACATCACAAAGAATTGGAACCGCTGCTACTAACCGGTGGTTACAGGACCCTATTCCTGCCTCTATGTCGCAGCCAACTCCTCACAAAGCTGCTGCTTCTGATGGCCGCGCTAACACTGCTGAAGGCAATGGAAACAATGCAAATTTTCATGACCGTATGATGGCTTTTCAGTCCCAACTCACTGCTATGAAACAAGATGTTCTTGCTGCCCAAAATGCTGCTTTGGCTAAAAAAGGTAATGGTGTGATTTCTGCTTGCAAAGTGCATCTGCTGCCCTCTTCCTCCACAGGTACAACAGCCTCCAGTCTGCTTGGTGACCGCCCTTTGGTGCTCGGGCTACCTGCTGTTCCGTTTTCAAGTGAATCTGATGCTGAAGTACAAGAGGAAAGTGGTTCGGATTTGAAGAAAAGGAAGCGTATGCTATACCGTCAGAATGAAGTATCATTTGCTGCTGATGGGAGTATAGGAAATGTTGTAATAGGATCAAATGTTAGTCATGGGGGGGATGATGATATGTATGTAACTGCTGGTCCTATAGATGATGAACAAGTTGTAATGGCAGGTCCTGATGATCAGGCCTGCCTAGGTGAATGAGTCTAGTAGCTTGGAATTGCCGGGGTGTAGGTAGCCCGAGTGCAATTCCCGACCTTAAATACCTAGTCCGGCACTTCAATCCGGACCTTTTATTCCTAAGTGAGACACTAGCTCACCGAAATAAAATTGAAGAACTCCGTTTTTTGCTTGGTTACGATTCTTGTTTTCATGTAGACCGCACCGGTAGATCCGGGGGTTTAGCTTTATTTTGGAAAGACTCTTTACATTGTCAGCTTGTAAATTTTTCTAACAACCATATTACTGTTGAAATTGTTAACAACACTCTGGGTAATTGGCGCGTTACCGACTATTATGGCTATCCTAATGGAGGTCGTAGATCAGCCGCTTGGAATTTTCTTCGACAACTGTCTTCTCAATTTTCAGGTCCATGGTGCATCTTAGGAGATTTTAATGATATTTTAGATGCAAGTGAGAAAAGGGGACGAAATTTAAGACCCCAATGGCTTATCAATGGCTTCCGTCAAGCGGTTCTTGATTCAGGTTTATCCGACGTTCCAGTCGAAGGCTATCCGTACACTTGGTTTAAAAGTCTTGGTACTCCACGTGCAGTGGAAGAGAGGTTAGATCGTGCTCTTGCAAATGATTTATGGTTTAATATTTTCCCGCATGCTACTGTTGAGACCCTTGTGGCACCTGCTTCCGATCATGACCCTATTCTTGTTAATGTTGCACCTACACCTCGGCTACAGGTTCCTAAACGTCATTTTCGCTATGAAAATGCGTGGCATCTAGAACCGGGGTTCAAGGATTTTGTTAATAATTCTTGGCAGGTTTACTCTACAAGTACTCTTCATCCAAAATTATCTTCATGTGCGGAGGACATGTGGGCGTGGAAGAAAACTCATTGTCACAAATTACAAAAAGACATTGAAGATTGCCGCAGACAATTACAAAACACACGGCTTGGTGCTATAGGTGAAGATCAGGTTCGTATGCTTGAGCTCCGGAAAAGAATGCAACGTTTATTATCCCAAGATGATGCATATTGGCGACAACGCGCAAAGACTCATTGGTACAAGGATGGTGATCGTAACACAAAATTTTTTCATGCATCCGCCACTGCTCGTAAAAAGGTAA
Protein sequence

>MS.gene69586.t1

MDPTNLNLEGLTLSEEGLVLNLESEPENAAVLEHCLIGRVLADREIQFAYFSERMSRAWKPGKNVTITKSVADRYLFQFHHKVDAARVLDEGPWLYDNFHIVMDRISPGVVPSFVPLNHIEFWIQVHGLPFGFIQPKVGQGIGSFLGTLKSYDGRNTIHSSYMRLKVAIDVTVPLKQEWRVRATNGEFVTVTFKYEKLGIFCHRCGLLGHTDKVCPDLFELESDDGVRSWGPHLKPTSQRIGTAATNRWLQDPIPASMSQPTPHKAAASDGRANTAEGNGNNANFHDRMMAFQSQLTAMKQDVLAAQNAALAKKGNGVISACKVHLLPSSSTGTTASSLLGDRPLVLGLPAVPFSSESDAEVQEESGSDLKKRKRMLYRQNEVSFAADGSIGNVVIGSNVSHGGDDDMYVTAGPIDDEQTLVAPASDHDPILVNVAPTPRLQVPKRHFRYENAWHLEPGFKDFVNNSWQVKIRFVCLSSGKECNVYYPKMMHIGDNAQRLIGTRMVIVTQNFFMHPPLLVKR