AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003264

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003264.t1 MTR_6g033215 80.412 194 38 0 2 195 102 295 1.97e-110 339
MS.gene003264.t1 MTR_8g470880 84.459 148 23 0 625 772 377 524 7.10e-84 277
MS.gene003264.t1 MTR_6g053790 49.097 277 79 5 131 405 35 251 7.79e-71 236
MS.gene003264.t1 MTR_1g100687 61.350 163 61 1 625 785 18 180 5.67e-66 219
MS.gene003264.t1 MTR_6g009010 58.385 161 51 1 625 785 105 249 1.47e-61 209
MS.gene003264.t1 MTR_0114s0080 85.321 109 16 0 641 749 21 129 7.50e-60 199
MS.gene003264.t1 MTR_0042s0130 54.598 174 77 1 625 798 121 292 9.23e-58 201
MS.gene003264.t1 MTR_4g020630 58.385 161 59 1 625 785 26 178 2.81e-56 202
MS.gene003264.t1 MTR_2g018005 63.504 137 46 1 619 751 94 230 1.23e-55 191
MS.gene003264.t1 MTR_6g034715 60.448 134 53 0 625 758 10 143 3.26e-55 188
MS.gene003264.t1 MTR_2g055450 58.741 143 59 0 625 767 138 280 1.99e-50 183
MS.gene003264.t1 MTR_6g034215 50.877 171 62 2 619 785 94 246 1.76e-49 177
MS.gene003264.t1 MTR_3g044860 63.559 118 43 0 654 771 3 120 8.59e-48 172
MS.gene003264.t1 MTR_1g051330 43.716 183 102 1 625 807 237 418 5.73e-46 176
MS.gene003264.t1 MTR_2g078880 55.000 140 48 1 625 764 81 205 3.44e-45 161
MS.gene003264.t1 MTR_6g046587 49.333 150 75 1 625 774 132 280 2.58e-42 156
MS.gene003264.t1 MTR_8g463110 57.983 119 50 0 667 785 124 242 2.22e-40 159
MS.gene003264.t1 MTR_4g044433 86.301 73 10 0 625 697 75 147 2.29e-40 145
MS.gene003264.t1 MTR_0093s0080 50.000 126 41 2 625 750 21 124 8.86e-36 132
MS.gene003264.t1 MTR_2g064335 44.118 136 66 1 626 761 18 143 1.89e-27 114
MS.gene003264.t1 MTR_8g446890 40.667 150 60 4 641 790 7 127 1.59e-26 106
MS.gene003264.t1 MTR_0010s0370 33.766 154 102 0 19 172 24 177 2.07e-26 107
MS.gene003264.t1 MTR_0010s0350 33.766 154 102 0 19 172 24 177 2.07e-26 107
MS.gene003264.t1 MTR_8g468010 63.492 63 23 0 110 172 1 63 3.51e-26 105
MS.gene003264.t1 MTR_4g033730 53.261 92 43 0 625 716 47 138 4.70e-26 104
MS.gene003264.t1 MTR_6g053230 29.730 185 91 2 1 182 22 170 1.12e-25 112
MS.gene003264.t1 MTR_8g019640 37.333 150 55 2 641 790 3 113 2.45e-23 103
MS.gene003264.t1 MTR_1g062290 68.852 61 19 0 729 789 1 61 3.46e-22 95.1
MS.gene003264.t1 MTR_1g032270 52.564 78 36 1 93 169 1 78 5.45e-22 93.2
MS.gene003264.t1 MTR_4g075740 41.429 140 62 4 2 140 22 142 5.93e-22 93.6
MS.gene003264.t1 MTR_0112s0060 57.534 73 31 0 678 750 36 108 3.05e-21 90.5
MS.gene003264.t1 MTR_3g024240 35.200 125 79 1 72 194 50 174 6.68e-21 91.7
MS.gene003264.t1 MTR_4g020545 28.019 207 90 6 57 256 80 234 4.20e-19 89.4
MS.gene003264.t1 MTR_0123s0050 66.000 50 17 0 696 745 1 50 5.33e-19 82.4
MS.gene003264.t1 MTR_2g084625 48.718 78 40 0 631 708 24 101 5.41e-18 86.7
MS.gene003264.t1 MTR_8g442690 30.247 162 107 2 625 784 51 208 5.46e-18 88.6
MS.gene003264.t1 MTR_3g053920 31.452 124 78 1 2 125 16 132 1.46e-17 84.3
MS.gene003264.t1 MTR_2g061500 30.579 121 77 1 2 122 16 129 6.77e-15 72.8
MS.gene003264.t1 MTR_3g041640 66.667 42 14 0 110 151 1 42 1.69e-14 72.0
MS.gene003264.t1 MTR_1g054775 32.500 160 106 2 627 785 658 816 3.84e-13 73.9
MS.gene003264.t1 MTR_4g103530 32.584 89 60 0 52 140 5 93 3.85e-12 66.2
MS.gene003264.t1 MTR_7g011710 32.099 81 55 0 52 132 5 85 7.45e-12 64.7
MS.gene003264.t1 MTR_4g122570 36.792 106 66 1 680 785 328 432 9.29e-12 68.9
MS.gene003264.t1 MTR_7g080340 46.429 56 30 0 628 683 4 59 1.41e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003264.t1 AT2G01050 24.044 183 133 3 28 210 80 256 1.23e-13 74.7
MS.gene003264.t1 AT3G31430 25.000 184 134 1 27 210 132 311 1.24e-11 67.4

Find 242 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTTCTTCTAGCAGTTTC+TGG 0.158466 2.4:+60347988 None:intergenic
AGACCAGATTGGGACCTATT+TGG 0.177001 2.4:-60350074 MS.gene003264:CDS
CCATGGATACCACAGAAATT+TGG 0.178210 2.4:-60349882 MS.gene003264:CDS
CATGCTCAGCATTGAGATTC+AGG 0.187783 2.4:+60350199 None:intergenic
CTTTCCAGTCACAAATTATA+TGG 0.199804 2.4:-60349373 MS.gene003264:CDS
GAGCTTTAGTATCCAATTCT+TGG 0.227006 2.4:-60347720 MS.gene003264:CDS
AATACAACCTGGCTCATTTA+TGG 0.229818 2.4:-60348522 MS.gene003264:CDS
GACTTAAAGACAACATTTAT+TGG 0.232275 2.4:+60348785 None:intergenic
CTCCAATCTCGACTTTCTTC+AGG 0.237763 2.4:+60349923 None:intergenic
TGTTGCCCTCCATGGGAATA+AGG 0.248345 2.4:+60350031 None:intergenic
TTTGTGGGCTTACTTGCTTT+TGG 0.259444 2.4:+60349047 None:intergenic
TGTTATGTTTATGGCATTAT+AGG 0.264579 2.4:-60349619 MS.gene003264:CDS
CGATATTTCGGTTCCCAAAT+AGG 0.292205 2.4:+60350060 None:intergenic
CAGATTCACCAATTGCCTTT+TGG 0.300296 2.4:-60349856 MS.gene003264:CDS
GGTTCTGGCCTCCTCTTGAT+TGG 0.303604 2.4:+60349213 None:intergenic
CTGCTGGACCTGTGCCTTGT+AGG 0.318640 2.4:-60350138 MS.gene003264:CDS
TGATCTGACTTTGTTAAATT+CGG 0.323714 2.4:+60349172 None:intergenic
TAGGCGGCTTGGCTCGGCTT+GGG 0.327720 2.4:+60348615 None:intergenic
GGCGGAGGTTTATGCGAATC+AGG 0.331581 2.4:-60349747 MS.gene003264:CDS
GGGGAGGTGCAGAAGCATTA+TGG 0.342734 2.4:-60349090 MS.gene003264:CDS
AAATAACTGCATCCAAGAAT+TGG 0.343002 2.4:+60347708 None:intergenic
TGGATGTTCACAGGATTCTA+TGG 0.353389 2.4:-60348015 MS.gene003264:intron
AGCAGAAGTCGCTCTATTCA+TGG 0.354409 2.4:-60347397 MS.gene003264:CDS
TTTCAGAATTTGCTGTCAAA+TGG 0.355193 2.4:-60348725 MS.gene003264:CDS
TCGCTCTATTCATGGAATTC+AGG 0.361057 2.4:-60347389 MS.gene003264:CDS
CATGGATACCACAGAAATTT+GGG 0.363213 2.4:-60349881 MS.gene003264:CDS
GACCAGATTGGGACCTATTT+GGG 0.364269 2.4:-60350073 MS.gene003264:CDS
GAAGGGGCCCACCAGGGGAC+AGG 0.373664 2.4:-60348952 MS.gene003264:CDS
CTAGTGCTCGCGGCTTCAGT+AGG 0.374697 2.4:-60348499 MS.gene003264:CDS
ACGGGTCCGGTCTTGTTAGA+TGG 0.378456 2.4:-60349276 MS.gene003264:CDS
AAGTTTACCTTGGTGTTTGA+TGG 0.379005 2.4:-60347929 MS.gene003264:CDS
ATAAGGGTCATGCGATATTT+CGG 0.389908 2.4:+60350048 None:intergenic
GTTGTTGTGTCTCAAGCTCT+TGG 0.390786 2.4:-60348578 MS.gene003264:CDS
ACGGTAGTAGCAAGAAGAAA+TGG 0.391828 2.4:-60349555 MS.gene003264:CDS
TTGGTCATTGAGAGGGAAGA+AGG 0.400278 2.4:-60349688 MS.gene003264:CDS
GAGGGAAGCAGGTGGATAAC+AGG 0.401244 2.4:-60349487 MS.gene003264:CDS
TGAGAATGCTTGGAGAATAG+AGG 0.407368 2.4:-60347575 MS.gene003264:CDS
CTCTCCTAGGCGGCTTGGCT+CGG 0.412370 2.4:+60348609 None:intergenic
TCAAGAGTGGCCAGATGAAT+AGG 0.414947 2.4:+60350096 None:intergenic
TGCTTGCCGCGCCTGTCCCC+TGG 0.416059 2.4:+60348941 None:intergenic
CTAGGCGGCTTGGCTCGGCT+TGG 0.420129 2.4:+60348614 None:intergenic
ATTTCAAATTTGAGAATGCT+TGG 0.422341 2.4:-60347585 MS.gene003264:CDS
CGGTAGTAGCAAGAAGAAAT+GGG 0.426030 2.4:-60349554 MS.gene003264:CDS
ATTATGGAAGCTAATAGAAT+TGG 0.428375 2.4:-60349074 MS.gene003264:CDS
GGGGACCACCTGCTGGTTTG+AGG 0.428654 2.4:+60348895 None:intergenic
TAAATGAGCCAGGTTGTATT+GGG 0.428762 2.4:+60348525 None:intergenic
ATAAATGAGCCAGGTTGTAT+TGG 0.433379 2.4:+60348524 None:intergenic
ACTCCAAGGCGGACCTGAAA+AGG 0.434431 2.4:-60349990 MS.gene003264:CDS
TTGTTGTGTCTCAAGCTCTT+GGG 0.441771 2.4:-60348577 MS.gene003264:CDS
GAGAAGGTTGGAGCTCTTGT+AGG 0.443725 2.4:-60349823 MS.gene003264:CDS
CGTCAAGCCATTCAAGATGC+TGG 0.444182 2.4:-60347829 MS.gene003264:CDS
ATTGGGCTGCGTCCTACAGC+TGG 0.445419 2.4:+60348542 None:intergenic
GCCACTCTTGAGACCAGATT+GGG 0.446698 2.4:-60350084 MS.gene003264:CDS
TGCAGTGATAAGTTTGAAGA+TGG 0.447162 2.4:-60349580 MS.gene003264:CDS
TGCTATCAAATACGAGAAGC+TGG 0.447750 2.4:-60349650 MS.gene003264:CDS
TTCAGAATTTGCTGTCAAAT+GGG 0.450662 2.4:-60348724 MS.gene003264:CDS
GTTGCCCTCCATGGGAATAA+GGG 0.451181 2.4:+60350032 None:intergenic
GCGGCAACAAGGAGGGAAGC+AGG 0.451603 2.4:-60349498 MS.gene003264:CDS
CTCTTGTAGGCTCGCATGTA+GGG 0.452168 2.4:-60349810 MS.gene003264:CDS
TTTCCAGTCACAAATTATAT+GGG 0.452420 2.4:-60349372 MS.gene003264:CDS
CTCCTCTTGATTGGTCCCTT+CGG 0.454776 2.4:+60349222 None:intergenic
TCTTACTCAAGCTGAGCTGC+TGG 0.457970 2.4:-60350154 MS.gene003264:CDS
CCATGAAGCCAAAAGGCAAT+TGG 0.459273 2.4:+60349848 None:intergenic
TGTCAACGGTCCGACGGGTC+CGG 0.463968 2.4:-60349289 MS.gene003264:CDS
TGAAAATTAATGCGGAATCT+AGG 0.464158 2.4:-60349339 MS.gene003264:CDS
TAAGAACTTGTTGCCCTCCA+TGG 0.464673 2.4:+60350023 None:intergenic
TTTATCTCTCCTAGGCGGCT+TGG 0.465127 2.4:+60348604 None:intergenic
GCGGCTTGGCTCGGCTTGGG+AGG 0.465642 2.4:+60348618 None:intergenic
AGCTGACCCACTTGCAGCAC+CGG 0.467204 2.4:+60348655 None:intergenic
ATCCTGAAGAAAGTCGAGAT+TGG 0.467872 2.4:-60349925 MS.gene003264:CDS
ATGACCAACTCTTGTTGTAA+AGG 0.469619 2.4:+60349703 None:intergenic
GGAGGGCTACAAGACCTAAC+TGG 0.469948 2.4:-60347867 MS.gene003264:CDS
CCTTCGGTAGGAATCTCCAT+AGG 0.472814 2.4:+60349238 None:intergenic
AGTTTACCTTGGTGTTTGAT+GGG 0.473140 2.4:-60347928 MS.gene003264:CDS
GATAGCTGGTTGGGTAGTGC+AGG 0.477653 2.4:-60347529 MS.gene003264:CDS
TTCCCAAATAGGTCCCAATC+TGG 0.478042 2.4:+60350071 None:intergenic
CGCGGCTTCAGTAGGGCAGG+TGG 0.478124 2.4:-60348491 MS.gene003264:CDS
GTGGGTCCCCAAATGACAAC+GGG 0.478176 2.4:-60348472 MS.gene003264:CDS
TTTACTTGGTTTAAAAGCTT+AGG 0.479268 2.4:-60347775 MS.gene003264:CDS
GAGGGTGATCACGGTAAGGA+AGG 0.485746 2.4:-60348416 MS.gene003264:CDS
CTTCACGTTGATGAAAAGAA+AGG 0.486227 2.4:-60347889 MS.gene003264:CDS
CTTATTGATGTTCATATGGA+AGG 0.486879 2.4:-60347805 MS.gene003264:CDS
GGTAAACAAGCCTATTCATC+TGG 0.488377 2.4:-60350106 MS.gene003264:CDS
ACTCTGTTGTTGCGAGTCAC+AGG 0.489036 2.4:+60347616 None:intergenic
TTGTTCTCCGCCTTGAGGTA+AGG 0.489197 2.4:+60349529 None:intergenic
TGTGATGATTGTTGAGCAAT+GGG 0.490565 2.4:+60348875 None:intergenic
CCCCTCGTCCCTCCGATCAC+CGG 0.490711 2.4:+60349447 None:intergenic
GGTAAGGAAGGGCAGCAAGC+TGG 0.490861 2.4:-60348404 MS.gene003264:CDS
GCTAGGACCGGTGCTGCAAG+TGG 0.494523 2.4:-60348662 MS.gene003264:CDS
CAAGCCGAGCCAAGCCGCCT+AGG 0.495867 2.4:-60348613 MS.gene003264:CDS
AACAAGAGTTGGTCATTGAG+AGG 0.497363 2.4:-60349696 MS.gene003264:CDS
TGCTTGGAGAATAGAGGAAG+GGG 0.498028 2.4:-60347569 MS.gene003264:CDS
TTCCGGTGATCGGAGGGACG+AGG 0.499509 2.4:-60349449 MS.gene003264:CDS
CCAAATTTCTGTGGTATCCA+TGG 0.499728 2.4:+60349882 None:intergenic
GGCGGCCGGAGTAACAATTC+CGG 0.500874 2.4:-60349466 MS.gene003264:CDS
AGCTCAGCTTGAGTAAGATT+CGG 0.502193 2.4:+60350159 None:intergenic
TTTGACAGAAGGGGCCCACC+AGG 0.502218 2.4:-60348959 MS.gene003264:CDS
AATAAGCCCAGCATCTTGAA+TGG 0.503815 2.4:+60347822 None:intergenic
GGCCCACCAGGGGACAGGCG+CGG 0.504786 2.4:-60348947 MS.gene003264:CDS
AACCCTCTGATAAGCCAGTT+AGG 0.506359 2.4:+60347853 None:intergenic
GTCAAGCCATTCAAGATGCT+GGG 0.506708 2.4:-60347828 MS.gene003264:CDS
TGGGCTTATTGATGTTCATA+TGG 0.507181 2.4:-60347809 MS.gene003264:CDS
GCTCTTGTAGGCTCGCATGT+AGG 0.507994 2.4:-60349811 MS.gene003264:CDS
CTAGACAAATAAGTTTACCT+TGG 0.508059 2.4:-60347939 MS.gene003264:CDS
TTTGGGCCCGTTGTCATTTG+GGG 0.509432 2.4:+60348466 None:intergenic
GAGCAATGGGGACCACCTGC+TGG 0.510726 2.4:+60348888 None:intergenic
GGCCACTCTTGAGACCAGAT+TGG 0.512060 2.4:-60350085 MS.gene003264:CDS
GGTCCGCCTTGGAGTAAAGC+TGG 0.512617 2.4:+60349998 None:intergenic
CGCGTGGAACAATGCTTAGG+AGG 0.513499 2.4:-60348994 MS.gene003264:CDS
CTGCTGGTTTGAGGAATCAA+AGG 0.513701 2.4:+60348904 None:intergenic
CTTTGATTCCTCAAACCAGC+AGG 0.514611 2.4:-60348903 MS.gene003264:CDS
TTGATGTTGTTCGAGATAGC+TGG 0.514869 2.4:-60347543 MS.gene003264:CDS
GTGGACTGAAGTGGACCCTA+TGG 0.516444 2.4:-60349254 MS.gene003264:CDS
TTCTCGTCCATGAAGCCAAA+AGG 0.516938 2.4:+60349841 None:intergenic
CAGCATCTTGAATGGCTTGA+CGG 0.517828 2.4:+60347830 None:intergenic
GGCTTCATGGACGAGAAGGT+TGG 0.518409 2.4:-60349835 MS.gene003264:CDS
GGATTCTTGATCGCAGCCCT+TGG 0.520727 2.4:-60349969 MS.gene003264:CDS
TTCACGTTGATGAAAAGAAA+GGG 0.524371 2.4:-60347888 MS.gene003264:CDS
GCTCGCGGCTTCAGTAGGGC+AGG 0.524920 2.4:-60348494 MS.gene003264:CDS
AGCCCACAAAATTCTACAGC+TGG 0.527788 2.4:-60349034 MS.gene003264:CDS
AATGCTTGGAGAATAGAGGA+AGG 0.527949 2.4:-60347571 MS.gene003264:CDS
CTGAATCTCAATGCTGAGCA+TGG 0.530109 2.4:-60350198 MS.gene003264:CDS
GTTGTTCGAGATAGCTGGTT+GGG 0.530242 2.4:-60347538 MS.gene003264:CDS
AAGAACTTGTTGCCCTCCAT+GGG 0.533451 2.4:+60350024 None:intergenic
TTACCACAACGCGACCTACA+AGG 0.533455 2.4:+60350124 None:intergenic
CTTAGTCCAGCTTTACTCCA+AGG 0.537023 2.4:-60350004 MS.gene003264:CDS
AGGCGCGTGGAACAATGCTT+AGG 0.537227 2.4:-60348997 MS.gene003264:CDS
ACAACTACGGGCCATGGCGG+AGG 0.537762 2.4:-60349762 MS.gene003264:CDS
CTGCTAGAAGAAGAGACTCA+TGG 0.538974 2.4:-60347981 MS.gene003264:CDS
GAAGATAAAACGGCGGGACC+TGG 0.540532 2.4:-60348356 MS.gene003264:intron
TCCGGTGATCGGAGGGACGA+GGG 0.541732 2.4:-60349448 MS.gene003264:CDS
GGGGACAGGCGCGGCAAGCA+AGG 0.541990 2.4:-60348938 MS.gene003264:CDS
ATGGAATGTCAACGGTCCGA+CGG 0.542039 2.4:-60349295 MS.gene003264:CDS
TCTTGATTGGTCCCTTCGGT+AGG 0.543319 2.4:+60349226 None:intergenic
GTCCTAGCAGCTTTGAAAGT+GGG 0.545236 2.4:+60348677 None:intergenic
TTGTGATGATTGTTGAGCAA+TGG 0.547701 2.4:+60348874 None:intergenic
AGCAGAAGGGATGAACGAAA+AGG 0.547926 2.4:-60349134 MS.gene003264:CDS
TCAACCTTTACAACAAGAGT+TGG 0.550599 2.4:-60349707 MS.gene003264:CDS
TGCTGGTTTGAGGAATCAAA+GGG 0.551773 2.4:+60348905 None:intergenic
GCAGGTGGATAACAGGCGGC+CGG 0.554593 2.4:-60349480 MS.gene003264:CDS
TTTACCTTGGTGTTTGATGG+GGG 0.554993 2.4:-60347926 MS.gene003264:CDS
GTTAACAAAGCATTAGCAGA+AGG 0.555344 2.4:-60349148 MS.gene003264:CDS
TTCGTTACATGGAATGTCAA+CGG 0.555490 2.4:-60349303 MS.gene003264:CDS
AAGACAACAACTACGGGCCA+TGG 0.555966 2.4:-60349768 MS.gene003264:CDS
AGGCACTCCTCGTGCTGTGG+AGG 0.556549 2.4:-60347755 MS.gene003264:CDS
ATGCTTGGAGAATAGAGGAA+GGG 0.556662 2.4:-60347570 MS.gene003264:CDS
TGCCGCGCCTGTCCCCTGGT+GGG 0.558005 2.4:+60348945 None:intergenic
TAACAATTCCGGTGATCGGA+GGG 0.559010 2.4:-60349455 MS.gene003264:CDS
GCACTAGCCATAAATGAGCC+AGG 0.560345 2.4:+60348515 None:intergenic
ACTTTCAAAGCTGCTAGGAC+CGG 0.561077 2.4:-60348674 MS.gene003264:CDS
GCGCCCATATAATTTGTGAC+TGG 0.562097 2.4:+60349369 None:intergenic
TTGCCGCGCCTGTCCCCTGG+TGG 0.564079 2.4:+60348944 None:intergenic
AATCAGGGTGGAAATTGCGT+TGG 0.566243 2.4:-60349731 MS.gene003264:CDS
TAGTGCTCGCGGCTTCAGTA+GGG 0.566663 2.4:-60348498 MS.gene003264:CDS
TCGTACTGATACTGCTGAGG+AGG 0.567165 2.4:-60348435 MS.gene003264:CDS
TGGAATGTCAACGGTCCGAC+GGG 0.569722 2.4:-60349294 MS.gene003264:CDS
TCGCATGACCCTTATTCCCA+TGG 0.573201 2.4:-60350040 MS.gene003264:CDS
TTATTGATGTTCATATGGAA+GGG 0.573302 2.4:-60347804 MS.gene003264:CDS
TACAGCTGGTGACAACATGC+AGG 0.573623 2.4:-60349020 MS.gene003264:CDS
GTTTACCTTGGTGTTTGATG+GGG 0.573943 2.4:-60347927 MS.gene003264:CDS
AGGGTGATCACGGTAAGGAA+GGG 0.578571 2.4:-60348415 MS.gene003264:CDS
CTTAGGCACTCCTCGTGCTG+TGG 0.581290 2.4:-60347758 MS.gene003264:CDS
ACAAGAGTTGGTCATTGAGA+GGG 0.582161 2.4:-60349695 MS.gene003264:CDS
AGAGCCGCTAACAAAATCCA+TGG 0.582469 2.4:-60349899 MS.gene003264:CDS
GCGGCTTCAGTAGGGCAGGT+GGG 0.583093 2.4:-60348490 MS.gene003264:CDS
GGAGTAACAATTCCGGTGAT+CGG 0.585185 2.4:-60349459 MS.gene003264:CDS
TTTGATGAAGACAACAACTA+CGG 0.585972 2.4:-60349775 MS.gene003264:CDS
CTGAATTGTTCTCCGCCTTG+AGG 0.586466 2.4:+60349524 None:intergenic
CCGGTGATCGGAGGGACGAG+GGG 0.588160 2.4:-60349447 MS.gene003264:CDS
CTCCCACTTTCAAAGCTGCT+AGG 0.589135 2.4:-60348679 MS.gene003264:CDS
GACAACATGCAGGAGGCGCG+TGG 0.589887 2.4:-60349010 MS.gene003264:CDS
GCTATCAAATACGAGAAGCT+GGG 0.590589 2.4:-60349649 MS.gene003264:CDS
GGTCCTAGCAGCTTTGAAAG+TGG 0.590940 2.4:+60348676 None:intergenic
ACTGCTGAGGAGGGTGATCA+CGG 0.591689 2.4:-60348425 MS.gene003264:CDS
TCAGTAGGCGGCAACAAGGA+GGG 0.592534 2.4:-60349505 MS.gene003264:CDS
ACAACAGCTTTATCTCTCCT+AGG 0.593243 2.4:+60348596 None:intergenic
GTAACAATTCCGGTGATCGG+AGG 0.593835 2.4:-60349456 MS.gene003264:CDS
AAAGCGCGCAAGCCAGCTGT+AGG 0.594081 2.4:-60348554 MS.gene003264:CDS
TCATTTATGGCTAGTGCTCG+CGG 0.597092 2.4:-60348509 MS.gene003264:CDS
CAATTCAGTAGGCGGCAACA+AGG 0.598383 2.4:-60349509 MS.gene003264:CDS
TGAGGAGGGTGATCACGGTA+AGG 0.601522 2.4:-60348420 MS.gene003264:CDS
GACCTAACTGGCTTATCAGA+GGG 0.601725 2.4:-60347855 MS.gene003264:CDS
TTGATGAAGACAACAACTAC+GGG 0.605890 2.4:-60349774 MS.gene003264:CDS
TGACAGAAGGGGCCCACCAG+GGG 0.606799 2.4:-60348957 MS.gene003264:CDS
ATAGGGAAATGATCAGAGGA+TGG 0.607417 2.4:+60347655 None:intergenic
AGTCCACCATCTAACAAGAC+CGG 0.608784 2.4:+60349270 None:intergenic
AAGAATTGGATACTAAAGCT+CGG 0.610900 2.4:+60347722 None:intergenic
TTCAGTAGGCGGCAACAAGG+AGG 0.611027 2.4:-60349506 MS.gene003264:CDS
ATGACCCTTATTCCCATGGA+GGG 0.612850 2.4:-60350036 MS.gene003264:CDS
TGGAACAATGCTTAGGAGGG+AGG 0.614114 2.4:-60348990 MS.gene003264:CDS
GGTCCGGTCTTGTTAGATGG+TGG 0.616998 2.4:-60349273 MS.gene003264:CDS
GCGGAGGTTTATGCGAATCA+GGG 0.618839 2.4:-60349746 MS.gene003264:CDS
CTAGGACCGGTGCTGCAAGT+GGG 0.620980 2.4:-60348661 MS.gene003264:CDS
TGATTCCTCAAACCAGCAGG+TGG 0.621595 2.4:-60348900 MS.gene003264:CDS
TTAACAAAGCATTAGCAGAA+GGG 0.622562 2.4:-60349147 MS.gene003264:CDS
TGTTGTTATCTAACGACCAA+GGG 0.624344 2.4:+60349953 None:intergenic
CTTCGGTAGGAATCTCCATA+GGG 0.626433 2.4:+60349239 None:intergenic
GGTGGGTCCCCAAATGACAA+CGG 0.626555 2.4:-60348473 MS.gene003264:CDS
CAAAATAGGGAAATGATCAG+AGG 0.627319 2.4:+60347651 None:intergenic
TCTATTCATGGAATTCAGGA+TGG 0.630534 2.4:-60347385 MS.gene003264:CDS
CAACGCGACCTACAAGGCAC+AGG 0.630875 2.4:+60350130 None:intergenic
GCAACAAGGAGGGAAGCAGG+TGG 0.633939 2.4:-60349495 MS.gene003264:CDS
TGTTAGATGGTGGACTGAAG+TGG 0.634409 2.4:-60349263 MS.gene003264:CDS
GTCTCGTACTGATACTGCTG+AGG 0.637703 2.4:-60348438 MS.gene003264:CDS
GCGTGGAACAATGCTTAGGA+GGG 0.638189 2.4:-60348993 MS.gene003264:CDS
CTATGGAGATTCCTACCGAA+GGG 0.639804 2.4:-60349237 MS.gene003264:CDS
AGACCTAACTGGCTTATCAG+AGG 0.640787 2.4:-60347856 MS.gene003264:CDS
TACCGAAGGGACCAATCAAG+AGG 0.640957 2.4:-60349224 MS.gene003264:CDS
TCCCAATCTGGTCTCAAGAG+TGG 0.641063 2.4:+60350083 None:intergenic
CCTATGGAGATTCCTACCGA+AGG 0.641771 2.4:-60349238 MS.gene003264:CDS
GAAATGGGGTCCTTACCTCA+AGG 0.642523 2.4:-60349539 MS.gene003264:CDS
AAGGCGGAGAACAATTCAGT+AGG 0.643383 2.4:-60349520 MS.gene003264:CDS
TGTTGTTCGAGATAGCTGGT+TGG 0.645984 2.4:-60347539 MS.gene003264:CDS
ATAGCTGGTTGGGTAGTGCA+GGG 0.646435 2.4:-60347528 MS.gene003264:CDS
CGTTGATGAAAAGAAAGGGA+GGG 0.646452 2.4:-60347884 MS.gene003264:CDS
CATTAAAGTGAAAATTAATG+CGG 0.647033 2.4:-60349347 MS.gene003264:CDS
TCAATGTCAATTGATAATTG+TGG 0.649862 2.4:-60349397 MS.gene003264:CDS
ACGTTGATGAAAAGAAAGGG+AGG 0.652104 2.4:-60347885 MS.gene003264:CDS
ATGTTGTTATCTAACGACCA+AGG 0.654258 2.4:+60349952 None:intergenic
GATAAGTTTGAAGATGGAGA+CGG 0.654530 2.4:-60349574 MS.gene003264:CDS
GCGGAGAACAATTCAGTAGG+CGG 0.660792 2.4:-60349517 MS.gene003264:CDS
GGACGCAGCCCAATACAACC+TGG 0.663662 2.4:-60348533 MS.gene003264:CDS
CGTACTGATACTGCTGAGGA+GGG 0.664793 2.4:-60348434 MS.gene003264:CDS
GGAAGCAGGTGGATAACAGG+CGG 0.666024 2.4:-60349484 MS.gene003264:CDS
TTGACAGAAGGGGCCCACCA+GGG 0.666668 2.4:-60348958 MS.gene003264:CDS
CGAAGGGACCAATCAAGAGG+AGG 0.667266 2.4:-60349221 MS.gene003264:CDS
GTGCCTTGTAGGTCGCGTTG+TGG 0.672685 2.4:-60350127 MS.gene003264:CDS
ATTCGCATAAACCTCCGCCA+TGG 0.672714 2.4:+60349751 None:intergenic
GATCACCGGAATTGTTACTC+CGG 0.672832 2.4:+60349461 None:intergenic
AATCTGTGCCCAAATTTCTG+TGG 0.676335 2.4:+60349873 None:intergenic
CTCGCAACAACAGAGTTGAG+AGG 0.677795 2.4:-60347609 MS.gene003264:CDS
TCTAACAAGACCGGACCCGT+CGG 0.678486 2.4:+60349279 None:intergenic
CATGACCCTTATTCCCATGG+AGG 0.678637 2.4:-60350037 MS.gene003264:CDS
AGCTGGTGACAACATGCAGG+AGG 0.685128 2.4:-60349017 MS.gene003264:CDS
GAGGTTTATGCGAATCAGGG+TGG 0.688788 2.4:-60349743 MS.gene003264:CDS
GGTAGTAGCAAGAAGAAATG+GGG 0.694604 2.4:-60349553 MS.gene003264:CDS
ACAACAACTACGGGCCATGG+CGG 0.708763 2.4:-60349765 MS.gene003264:CDS
AGTCCAGCTTTACTCCAAGG+CGG 0.722612 2.4:-60350001 MS.gene003264:CDS
ACAGCTTTATCTCTCCTAGG+CGG 0.742319 2.4:+60348599 None:intergenic
GTGATGATTGTTGAGCAATG+GGG 0.746910 2.4:+60348876 None:intergenic
ATGGGGTCCTTACCTCAAGG+CGG 0.760082 2.4:-60349536 MS.gene003264:CDS
TAATCATAAGATGACCAGCG+CGG 0.781933 2.4:-60348840 MS.gene003264:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTAAAGTGAAAATTAATG+CGG - chr2.4:60348233-60348252 MS.gene003264:intron 20.0%
!! CTAAAATTAAATTCCTTGTT+CGG - chr2.4:60349320-60349339 MS.gene003264:CDS 20.0%
! ATTAGTGCTAAAATTGAAGA+GGG - chr2.4:60349529-60349548 MS.gene003264:CDS 25.0%
! ATTATGGAAGCTAATAGAAT+TGG - chr2.4:60348506-60348525 MS.gene003264:CDS 25.0%
! ATTTCAAATTTGAGAATGCT+TGG - chr2.4:60349995-60350014 MS.gene003264:CDS 25.0%
! GACTTAAAGACAACATTTAT+TGG + chr2.4:60348798-60348817 None:intergenic 25.0%
! TAATAAGCTTTCAAATTGTG+CGG - chr2.4:60350086-60350105 MS.gene003264:CDS 25.0%
! TATTAGTGCTAAAATTGAAG+AGG - chr2.4:60349528-60349547 MS.gene003264:CDS 25.0%
! TGATCTGACTTTGTTAAATT+CGG + chr2.4:60348411-60348430 None:intergenic 25.0%
! TGTTATGTTTATGGCATTAT+AGG - chr2.4:60347961-60347980 MS.gene003264:CDS 25.0%
! TGTTGAAAGTAATAAAATCG+AGG - chr2.4:60349381-60349400 MS.gene003264:CDS 25.0%
! TTATTGATGTTCATATGGAA+GGG - chr2.4:60349776-60349795 MS.gene003264:CDS 25.0%
! TTTACTTGGTTTAAAAGCTT+AGG - chr2.4:60349805-60349824 MS.gene003264:CDS 25.0%
! TTTCCAGTCACAAATTATAT+GGG - chr2.4:60348208-60348227 MS.gene003264:intron 25.0%
!! AAGCTTTTAAACCAAGTAAA+AGG + chr2.4:60349805-60349824 None:intergenic 25.0%
!! AGCTTTTAAACCAAGTAAAA+GGG + chr2.4:60349804-60349823 None:intergenic 25.0%
!! TCAATGTCAATTGATAATTG+TGG - chr2.4:60348183-60348202 MS.gene003264:intron 25.0%
!!! CGAACAAGGAATTTAATTTT+AGG + chr2.4:60349322-60349341 None:intergenic 25.0%
!!! CTTCAATTTTAGCACTAATA+TGG + chr2.4:60349528-60349547 None:intergenic 25.0%
!!! GAGTTTTGTCTAACAAAATA+GGG + chr2.4:60349945-60349964 None:intergenic 25.0%
!!! GGTAAGTTTTGTTATGTTTA+TGG - chr2.4:60347952-60347971 MS.gene003264:CDS 25.0%
!!! GTTAACTTTTTTTCGTTACA+TGG - chr2.4:60348266-60348285 MS.gene003264:intron 25.0%
!!! TCCAGATTTTGAAGATAAAA+CGG - chr2.4:60349214-60349233 MS.gene003264:CDS 25.0%
AAATAACTGCATCCAAGAAT+TGG + chr2.4:60349875-60349894 None:intergenic 30.0%
AAGAATTGGATACTAAAGCT+CGG + chr2.4:60349861-60349880 None:intergenic 30.0%
CAATAGTTTCAGACAGAAAT+AGG + chr2.4:60349363-60349382 None:intergenic 30.0%
CTAGACAAATAAGTTTACCT+TGG - chr2.4:60349641-60349660 MS.gene003264:CDS 30.0%
CTTATTGATGTTCATATGGA+AGG - chr2.4:60349775-60349794 MS.gene003264:CDS 30.0%
CTTTCCAGTCACAAATTATA+TGG - chr2.4:60348207-60348226 MS.gene003264:intron 30.0%
TAAATTCGGAGCAAAAACTT+TGG + chr2.4:60348397-60348416 None:intergenic 30.0%
TGAAAATTAATGCGGAATCT+AGG - chr2.4:60348241-60348260 MS.gene003264:intron 30.0%
TTTGATGAAGACAACAACTA+CGG - chr2.4:60347805-60347824 MS.gene003264:CDS 30.0%
! ACGAATTTTTGTATGCACAT+GGG - chr2.4:60348469-60348488 MS.gene003264:CDS 30.0%
! AGACTCATGGAATTTTATTC+GGG - chr2.4:60349612-60349631 MS.gene003264:CDS 30.0%
! GAGACTCATGGAATTTTATT+CGG - chr2.4:60349611-60349630 MS.gene003264:CDS 30.0%
! GAGGAATTTCGTTATCTTTT+GGG - chr2.4:60349400-60349419 MS.gene003264:CDS 30.0%
! TTAACAAAGCATTAGCAGAA+GGG - chr2.4:60348433-60348452 MS.gene003264:CDS 30.0%
! TTCACGTTGATGAAAAGAAA+GGG - chr2.4:60349692-60349711 MS.gene003264:CDS 30.0%
!! AGATTTTGAAGATAAAACGG+CGG - chr2.4:60349217-60349236 MS.gene003264:CDS 30.0%
!! GGAGTTTTGTCTAACAAAAT+AGG + chr2.4:60349946-60349965 None:intergenic 30.0%
!! TTCAGAATTTGCTGTCAAAT+GGG - chr2.4:60348856-60348875 MS.gene003264:CDS 30.0%
!! TTTCAGAATTTGCTGTCAAA+TGG - chr2.4:60348855-60348874 MS.gene003264:CDS 30.0%
!!! AAGATTTTCTAGCTTTGCAT+TGG + chr2.4:60349899-60349918 None:intergenic 30.0%
!!! AGATTTTCTAGCTTTGCATT+GGG + chr2.4:60349898-60349917 None:intergenic 30.0%
AATACAACCTGGCTCATTTA+TGG - chr2.4:60349058-60349077 MS.gene003264:CDS 35.0%
AATAGAATTAGTAGAGGTGG+AGG - chr2.4:60349445-60349464 MS.gene003264:CDS 35.0%
ATAAATGAGCCAGGTTGTAT+TGG + chr2.4:60349059-60349078 None:intergenic 35.0%
ATAAGGGTCATGCGATATTT+CGG + chr2.4:60347535-60347554 None:intergenic 35.0%
ATGTTGTTATCTAACGACCA+AGG + chr2.4:60347631-60347650 None:intergenic 35.0%
CAAAATAGGGAAATGATCAG+AGG + chr2.4:60349932-60349951 None:intergenic 35.0%
CATGGATACCACAGAAATTT+GGG - chr2.4:60347699-60347718 MS.gene003264:CDS 35.0%
CCACCTCTACTAATTCTATT+AGG + chr2.4:60349445-60349464 None:intergenic 35.0%
CCTAATAGAATTAGTAGAGG+TGG - chr2.4:60349442-60349461 MS.gene003264:CDS 35.0%
CCTTGTTCGGTATTATAAAC+CGG - chr2.4:60349333-60349352 MS.gene003264:CDS 35.0%
GATAAGTTTGAAGATGGAGA+CGG - chr2.4:60348006-60348025 MS.gene003264:intron 35.0%
GCACCTAATAGAATTAGTAG+AGG - chr2.4:60349439-60349458 MS.gene003264:CDS 35.0%
TAAATGAGCCAGGTTGTATT+GGG + chr2.4:60349058-60349077 None:intergenic 35.0%
TCAACCTTTACAACAAGAGT+TGG - chr2.4:60347873-60347892 MS.gene003264:CDS 35.0%
TCAGACAGAAATAGGATATC+CGG + chr2.4:60349355-60349374 None:intergenic 35.0%
TCTATTCATGGAATTCAGGA+TGG - chr2.4:60350195-60350214 MS.gene003264:CDS 35.0%
TGCAGTGATAAGTTTGAAGA+TGG - chr2.4:60348000-60348019 MS.gene003264:CDS 35.0%
TGGGCTTATTGATGTTCATA+TGG - chr2.4:60349771-60349790 MS.gene003264:CDS 35.0%
TGTGATGATTGTTGAGCAAT+GGG + chr2.4:60348708-60348727 None:intergenic 35.0%
TGTTGTTATCTAACGACCAA+GGG + chr2.4:60347630-60347649 None:intergenic 35.0%
TTCGTTACATGGAATGTCAA+CGG - chr2.4:60348277-60348296 MS.gene003264:intron 35.0%
TTGATGAAGACAACAACTAC+GGG - chr2.4:60347806-60347825 MS.gene003264:CDS 35.0%
TTGTGATGATTGTTGAGCAA+TGG + chr2.4:60348709-60348728 None:intergenic 35.0%
! ATGACCAACTCTTGTTGTAA+AGG + chr2.4:60347880-60347899 None:intergenic 35.0%
! CGAATTTTTGTATGCACATG+GGG - chr2.4:60348470-60348489 MS.gene003264:CDS 35.0%
! CGAGGAATTTCGTTATCTTT+TGG - chr2.4:60349399-60349418 MS.gene003264:CDS 35.0%
! CTTCACGTTGATGAAAAGAA+AGG - chr2.4:60349691-60349710 MS.gene003264:CDS 35.0%
! CTTTCTTTTCATCAACGTGA+AGG + chr2.4:60349693-60349712 None:intergenic 35.0%
! GAATTTTTGTATGCACATGG+GGG - chr2.4:60348471-60348490 MS.gene003264:CDS 35.0%
! GACGAATTTTTGTATGCACA+TGG - chr2.4:60348468-60348487 MS.gene003264:CDS 35.0%
! GACTCATGGAATTTTATTCG+GGG - chr2.4:60349613-60349632 MS.gene003264:CDS 35.0%
! GAGCTTTAGTATCCAATTCT+TGG - chr2.4:60349860-60349879 MS.gene003264:CDS 35.0%
! GTATCCATGGATTTTGTTAG+CGG + chr2.4:60347688-60347707 None:intergenic 35.0%
! GTTAACAAAGCATTAGCAGA+AGG - chr2.4:60348432-60348451 MS.gene003264:CDS 35.0%
!! AAAAACTTTGGTTCTGGTTC+TGG + chr2.4:60348385-60348404 None:intergenic 35.0%
!! AAGTTTACCTTGGTGTTTGA+TGG - chr2.4:60349651-60349670 MS.gene003264:CDS 35.0%
!! AGTTTACCTTGGTGTTTGAT+GGG - chr2.4:60349652-60349671 MS.gene003264:CDS 35.0%
!! GATTTTGAAGATAAAACGGC+GGG - chr2.4:60349218-60349237 MS.gene003264:CDS 35.0%
!! GCCGTTTTATCTTCAAAATC+TGG + chr2.4:60349218-60349237 None:intergenic 35.0%
!! TAATTTTAGGAATTACGCGC+AGG + chr2.4:60349309-60349328 None:intergenic 35.0%
!!! ATCAGTACGAGACCTTTTTT+TGG + chr2.4:60349135-60349154 None:intergenic 35.0%
!!! TCAGTACGAGACCTTTTTTT+GGG + chr2.4:60349134-60349153 None:intergenic 35.0%
AACTCATTGCAACAAGCTTC+AGG - chr2.4:60350131-60350150 MS.gene003264:CDS 40.0%
AATAAGCCCAGCATCTTGAA+TGG + chr2.4:60349761-60349780 None:intergenic 40.0%
AATCTGTGCCCAAATTTCTG+TGG + chr2.4:60347710-60347729 None:intergenic 40.0%
AATGCTTGGAGAATAGAGGA+AGG - chr2.4:60350009-60350028 MS.gene003264:CDS 40.0%
ACGGTAGTAGCAAGAAGAAA+TGG - chr2.4:60348025-60348044 MS.gene003264:intron 40.0%
AGCTCAGCTTGAGTAAGATT+CGG + chr2.4:60347424-60347443 None:intergenic 40.0%
AGTGCTAAAATTGAAGAGGG+CGG - chr2.4:60349532-60349551 MS.gene003264:CDS 40.0%
ATAGGGAAATGATCAGAGGA+TGG + chr2.4:60349928-60349947 None:intergenic 40.0%
ATCCTGAAGAAAGTCGAGAT+TGG - chr2.4:60347655-60347674 MS.gene003264:CDS 40.0%
ATGCTTGGAGAATAGAGGAA+GGG - chr2.4:60350010-60350029 MS.gene003264:CDS 40.0%
ATTCCATGCTACGATACTCA+TGG + chr2.4:60349269-60349288 None:intergenic 40.0%
CCAAATTTCTGTGGTATCCA+TGG + chr2.4:60347701-60347720 None:intergenic 40.0%
CCATGGATACCACAGAAATT+TGG - chr2.4:60347698-60347717 MS.gene003264:CDS 40.0%
CCGGTTTATAATACCGAACA+AGG + chr2.4:60349336-60349355 None:intergenic 40.0%
CGATATTTCGGTTCCCAAAT+AGG + chr2.4:60347523-60347542 None:intergenic 40.0%
CGGTAGTAGCAAGAAGAAAT+GGG - chr2.4:60348026-60348045 MS.gene003264:intron 40.0%
GCTATCAAATACGAGAAGCT+GGG - chr2.4:60347931-60347950 MS.gene003264:CDS 40.0%
GGTAAACAAGCCTATTCATC+TGG - chr2.4:60347474-60347493 MS.gene003264:intron 40.0%
GGTAGTAGCAAGAAGAAATG+GGG - chr2.4:60348027-60348046 MS.gene003264:intron 40.0%
GTGATGATTGTTGAGCAATG+GGG + chr2.4:60348707-60348726 None:intergenic 40.0%
TAAGCTTTCAAATTGTGCGG+AGG - chr2.4:60350089-60350108 MS.gene003264:CDS 40.0%
TAATCATAAGATGACCAGCG+CGG - chr2.4:60348740-60348759 MS.gene003264:CDS 40.0%
TCGCTCTATTCATGGAATTC+AGG - chr2.4:60350191-60350210 MS.gene003264:CDS 40.0%
TCTCTTCTTCTAGCAGTTTC+TGG + chr2.4:60349595-60349614 None:intergenic 40.0%
TGAGAATGCTTGGAGAATAG+AGG - chr2.4:60350005-60350024 MS.gene003264:CDS 40.0%
TGCTATCAAATACGAGAAGC+TGG - chr2.4:60347930-60347949 MS.gene003264:CDS 40.0%
TGGATGTTCACAGGATTCTA+TGG - chr2.4:60349565-60349584 MS.gene003264:CDS 40.0%
TTGATGTTGTTCGAGATAGC+TGG - chr2.4:60350037-60350056 MS.gene003264:CDS 40.0%
TTGTTGTGTCTCAAGCTCTT+GGG - chr2.4:60349003-60349022 MS.gene003264:CDS 40.0%
! AACAAGAGTTGGTCATTGAG+AGG - chr2.4:60347884-60347903 MS.gene003264:CDS 40.0%
! ACAACAGCTTTATCTCTCCT+AGG + chr2.4:60348987-60349006 None:intergenic 40.0%
! ACAAGAGTTGGTCATTGAGA+GGG - chr2.4:60347885-60347904 MS.gene003264:CDS 40.0%
! ACGTTGATGAAAAGAAAGGG+AGG - chr2.4:60349695-60349714 MS.gene003264:CDS 40.0%
! CACCAGCTGTAGAATTTTGT+GGG + chr2.4:60348551-60348570 None:intergenic 40.0%
! CAGATTCACCAATTGCCTTT+TGG - chr2.4:60347724-60347743 MS.gene003264:CDS 40.0%
! CGTTGATGAAAAGAAAGGGA+GGG - chr2.4:60349696-60349715 MS.gene003264:CDS 40.0%
! TCACCAGCTGTAGAATTTTG+TGG + chr2.4:60348552-60348571 None:intergenic 40.0%
! TGCGATCAAGAATCCTTTTC+AGG + chr2.4:60347606-60347625 None:intergenic 40.0%
! TTTGTGGGCTTACTTGCTTT+TGG + chr2.4:60348536-60348555 None:intergenic 40.0%
!! AGGATGCAGATTTTGACAGA+AGG - chr2.4:60348610-60348629 MS.gene003264:CDS 40.0%
!! GATGCAGATTTTGACAGAAG+GGG - chr2.4:60348612-60348631 MS.gene003264:CDS 40.0%
!! GGATGCAGATTTTGACAGAA+GGG - chr2.4:60348611-60348630 MS.gene003264:CDS 40.0%
!! GTTTACCTTGGTGTTTGATG+GGG - chr2.4:60349653-60349672 MS.gene003264:CDS 40.0%
!! TGCTGGTTTGAGGAATCAAA+GGG + chr2.4:60348678-60348697 None:intergenic 40.0%
!! TTGTGGGCTTACTTGCTTTT+GGG + chr2.4:60348535-60348554 None:intergenic 40.0%
!! TTTACCTTGGTGTTTGATGG+GGG - chr2.4:60349654-60349673 MS.gene003264:CDS 40.0%
!!! CGCTTTATTTTGGCGTAACA+CGG - chr2.4:60349471-60349490 MS.gene003264:CDS 40.0%
AACCCTCTGATAAGCCAGTT+AGG + chr2.4:60349730-60349749 None:intergenic 45.0%
AAGGCGGAGAACAATTCAGT+AGG - chr2.4:60348060-60348079 MS.gene003264:intron 45.0%
AATCAGGGTGGAAATTGCGT+TGG - chr2.4:60347849-60347868 MS.gene003264:CDS 45.0%
ACTTTCAAAGCTGCTAGGAC+CGG - chr2.4:60348906-60348925 MS.gene003264:CDS 45.0%
AGACCAGATTGGGACCTATT+TGG - chr2.4:60347506-60347525 MS.gene003264:intron 45.0%
AGAGCCGCTAACAAAATCCA+TGG - chr2.4:60347681-60347700 MS.gene003264:CDS 45.0%
AGCAGAAGGGATGAACGAAA+AGG - chr2.4:60348446-60348465 MS.gene003264:CDS 45.0%
AGCAGAAGTCGCTCTATTCA+TGG - chr2.4:60350183-60350202 MS.gene003264:CDS 45.0%
AGCCCACAAAATTCTACAGC+TGG - chr2.4:60348546-60348565 MS.gene003264:CDS 45.0%
AGTCCACCATCTAACAAGAC+CGG + chr2.4:60348313-60348332 None:intergenic 45.0%
ATGACAACGGGCCCAAAAAA+AGG - chr2.4:60349120-60349139 MS.gene003264:CDS 45.0%
ATGACCCTTATTCCCATGGA+GGG - chr2.4:60347544-60347563 MS.gene003264:CDS 45.0%
CAGCATCTTGAATGGCTTGA+CGG + chr2.4:60349753-60349772 None:intergenic 45.0%
CCATGAAGCCAAAAGGCAAT+TGG + chr2.4:60347735-60347754 None:intergenic 45.0%
CTATGGAGATTCCTACCGAA+GGG - chr2.4:60348343-60348362 MS.gene003264:intron 45.0%
CTCCAATCTCGACTTTCTTC+AGG + chr2.4:60347660-60347679 None:intergenic 45.0%
CTGAATCTCAATGCTGAGCA+TGG - chr2.4:60347382-60347401 MS.gene003264:CDS 45.0%
CTGCTAGAAGAAGAGACTCA+TGG - chr2.4:60349599-60349618 MS.gene003264:CDS 45.0%
CTTAGTCCAGCTTTACTCCA+AGG - chr2.4:60347576-60347595 MS.gene003264:CDS 45.0%
CTTCGGTAGGAATCTCCATA+GGG + chr2.4:60348344-60348363 None:intergenic 45.0%
CTTTGATTCCTCAAACCAGC+AGG - chr2.4:60348677-60348696 MS.gene003264:CDS 45.0%
GACCAGATTGGGACCTATTT+GGG - chr2.4:60347507-60347526 MS.gene003264:intron 45.0%
GATCACCGGAATTGTTACTC+CGG + chr2.4:60348122-60348141 None:intergenic 45.0%
GGAGTAACAATTCCGGTGAT+CGG - chr2.4:60348121-60348140 MS.gene003264:intron 45.0%
GTCAAGCCATTCAAGATGCT+GGG - chr2.4:60349752-60349771 MS.gene003264:CDS 45.0%
GTTGTTCGAGATAGCTGGTT+GGG - chr2.4:60350042-60350061 MS.gene003264:CDS 45.0%
GTTGTTGTGTCTCAAGCTCT+TGG - chr2.4:60349002-60349021 MS.gene003264:CDS 45.0%
TAACAATTCCGGTGATCGGA+GGG - chr2.4:60348125-60348144 MS.gene003264:intron 45.0%
TCAAGAGTGGCCAGATGAAT+AGG + chr2.4:60347487-60347506 None:intergenic 45.0%
TCATTTATGGCTAGTGCTCG+CGG - chr2.4:60349071-60349090 MS.gene003264:CDS 45.0%
TGCTTGGAGAATAGAGGAAG+GGG - chr2.4:60350011-60350030 MS.gene003264:CDS 45.0%
TGTTGTTCGAGATAGCTGGT+TGG - chr2.4:60350041-60350060 MS.gene003264:CDS 45.0%
TTCCCAAATAGGTCCCAATC+TGG + chr2.4:60347512-60347531 None:intergenic 45.0%
TTCTCGTCCATGAAGCCAAA+AGG + chr2.4:60347742-60347761 None:intergenic 45.0%
TTGGTCATTGAGAGGGAAGA+AGG - chr2.4:60347892-60347911 MS.gene003264:CDS 45.0%
! ACAGCTTTATCTCTCCTAGG+CGG + chr2.4:60348984-60349003 None:intergenic 45.0%
! AGACCTAACTGGCTTATCAG+AGG - chr2.4:60349724-60349743 MS.gene003264:CDS 45.0%
! CAATTTTCTGTATTCCGCGC+TGG + chr2.4:60348757-60348776 None:intergenic 45.0%
! CATGCTCAGCATTGAGATTC+AGG + chr2.4:60347384-60347403 None:intergenic 45.0%
! CGGAGCAAAAACTTTGGTTC+TGG + chr2.4:60348391-60348410 None:intergenic 45.0%
! GACCTAACTGGCTTATCAGA+GGG - chr2.4:60349725-60349744 MS.gene003264:CDS 45.0%
! GCGCCCATATAATTTGTGAC+TGG + chr2.4:60348214-60348233 None:intergenic 45.0%
! TTTTTGTATGCACATGGGGG+AGG - chr2.4:60348474-60348493 MS.gene003264:CDS 45.0%
!! AAGAACTTGTTGCCCTCCAT+GGG + chr2.4:60347559-60347578 None:intergenic 45.0%
!! AGCATGGAATTGCCGATTCT+TGG - chr2.4:60349279-60349298 MS.gene003264:CDS 45.0%
!! CTGCTGGTTTGAGGAATCAA+AGG + chr2.4:60348679-60348698 None:intergenic 45.0%
!! GCATGGAATTGCCGATTCTT+GGG - chr2.4:60349280-60349299 MS.gene003264:CDS 45.0%
!! GTCCTAGCAGCTTTGAAAGT+GGG + chr2.4:60348906-60348925 None:intergenic 45.0%
!! TAAGAACTTGTTGCCCTCCA+TGG + chr2.4:60347560-60347579 None:intergenic 45.0%
!! TGTTAGATGGTGGACTGAAG+TGG - chr2.4:60348317-60348336 MS.gene003264:intron 45.0%
!! TTTTGGGCCCGTTGTCATTT+GGG + chr2.4:60349118-60349137 None:intergenic 45.0%
!! TTTTTGGGCCCGTTGTCATT+TGG + chr2.4:60349119-60349138 None:intergenic 45.0%
!!! CCAATTGCCTTTTGGCTTCA+TGG - chr2.4:60347732-60347751 MS.gene003264:CDS 45.0%
!!! GTGGAGGCATCGCTTTATTT+TGG - chr2.4:60349461-60349480 MS.gene003264:CDS 45.0%
!!! TGGAAGGGTACCCTTTTACT+TGG - chr2.4:60349791-60349810 MS.gene003264:CDS 45.0%
!!! TTTTGGCTTCATGGACGAGA+AGG - chr2.4:60347741-60347760 MS.gene003264:CDS 45.0%
AAGACAACAACTACGGGCCA+TGG - chr2.4:60347812-60347831 MS.gene003264:CDS 50.0%
AAGTCCCCCATCAAACACCA+AGG + chr2.4:60349661-60349680 None:intergenic 50.0%
AATTGAAGAGGGCGGTGGTA+TGG - chr2.4:60349540-60349559 MS.gene003264:CDS 50.0%
ACGATACTCATGGCTCTCAG+CGG + chr2.4:60349259-60349278 None:intergenic 50.0%
ACTCTGTTGTTGCGAGTCAC+AGG + chr2.4:60349967-60349986 None:intergenic 50.0%
AGGGTGATCACGGTAAGGAA+GGG - chr2.4:60349165-60349184 MS.gene003264:CDS 50.0%
AGTCCAGCTTTACTCCAAGG+CGG - chr2.4:60347579-60347598 MS.gene003264:CDS 50.0%
ATAGCTGGTTGGGTAGTGCA+GGG - chr2.4:60350052-60350071 MS.gene003264:CDS 50.0%
ATGGAATGTCAACGGTCCGA+CGG - chr2.4:60348285-60348304 MS.gene003264:intron 50.0%
ATTCGCATAAACCTCCGCCA+TGG + chr2.4:60347832-60347851 None:intergenic 50.0%
CAATTCAGTAGGCGGCAACA+AGG - chr2.4:60348071-60348090 MS.gene003264:intron 50.0%
CATGACCCTTATTCCCATGG+AGG - chr2.4:60347543-60347562 MS.gene003264:CDS 50.0%
CCTATGGAGATTCCTACCGA+AGG - chr2.4:60348342-60348361 MS.gene003264:intron 50.0%
CCTTCGGTAGGAATCTCCAT+AGG + chr2.4:60348345-60348364 None:intergenic 50.0%
CGTCAAGCCATTCAAGATGC+TGG - chr2.4:60349751-60349770 MS.gene003264:CDS 50.0%
CTCCCACTTTCAAAGCTGCT+AGG - chr2.4:60348901-60348920 MS.gene003264:CDS 50.0%
CTCGCAACAACAGAGTTGAG+AGG - chr2.4:60349971-60349990 MS.gene003264:CDS 50.0%
CTCTTGTAGGCTCGCATGTA+GGG - chr2.4:60347770-60347789 MS.gene003264:CDS 50.0%
CTGAATTGTTCTCCGCCTTG+AGG + chr2.4:60348059-60348078 None:intergenic 50.0%
GAAATGGGGTCCTTACCTCA+AGG - chr2.4:60348041-60348060 MS.gene003264:intron 50.0%
GAGAAGGTTGGAGCTCTTGT+AGG - chr2.4:60347757-60347776 MS.gene003264:CDS 50.0%
GAGGTTTATGCGAATCAGGG+TGG - chr2.4:60347837-60347856 MS.gene003264:CDS 50.0%
GCACTAGCCATAAATGAGCC+AGG + chr2.4:60349068-60349087 None:intergenic 50.0%
GCCACTCTTGAGACCAGATT+GGG - chr2.4:60347496-60347515 MS.gene003264:intron 50.0%
GCGGAGAACAATTCAGTAGG+CGG - chr2.4:60348063-60348082 MS.gene003264:intron 50.0%
GCGGAGGTTTATGCGAATCA+GGG - chr2.4:60347834-60347853 MS.gene003264:CDS 50.0%
GCGTGGAACAATGCTTAGGA+GGG - chr2.4:60348587-60348606 MS.gene003264:CDS 50.0%
GCTAAAATTGAAGAGGGCGG+TGG - chr2.4:60349535-60349554 MS.gene003264:CDS 50.0%
GTAACAATTCCGGTGATCGG+AGG - chr2.4:60348124-60348143 MS.gene003264:intron 50.0%
GTTGCCCTCCATGGGAATAA+GGG + chr2.4:60347551-60347570 None:intergenic 50.0%
TACAGCTGGTGACAACATGC+AGG - chr2.4:60348560-60348579 MS.gene003264:CDS 50.0%
TACCGAAGGGACCAATCAAG+AGG - chr2.4:60348356-60348375 MS.gene003264:intron 50.0%
TCCCAATCTGGTCTCAAGAG+TGG + chr2.4:60347500-60347519 None:intergenic 50.0%
TCGCATGACCCTTATTCCCA+TGG - chr2.4:60347540-60347559 MS.gene003264:CDS 50.0%
TCTTACTCAAGCTGAGCTGC+TGG - chr2.4:60347426-60347445 MS.gene003264:intron 50.0%
TGATTCCTCAAACCAGCAGG+TGG - chr2.4:60348680-60348699 MS.gene003264:CDS 50.0%
TGGAACAATGCTTAGGAGGG+AGG - chr2.4:60348590-60348609 MS.gene003264:CDS 50.0%
TGTTGCCCTCCATGGGAATA+AGG + chr2.4:60347552-60347571 None:intergenic 50.0%
TTACCACAACGCGACCTACA+AGG + chr2.4:60347459-60347478 None:intergenic 50.0%
TTGTTCTCCGCCTTGAGGTA+AGG + chr2.4:60348054-60348073 None:intergenic 50.0%
TTTATCTCTCCTAGGCGGCT+TGG + chr2.4:60348979-60348998 None:intergenic 50.0%
! AACTTTTCCTCCACAGCACG+AGG + chr2.4:60349835-60349854 None:intergenic 50.0%
! CGTACTGATACTGCTGAGGA+GGG - chr2.4:60349146-60349165 MS.gene003264:CDS 50.0%
! CTCCTCTTGATTGGTCCCTT+CGG + chr2.4:60348361-60348380 None:intergenic 50.0%
! GAGCCATGAGTATCGTAGCA+TGG - chr2.4:60349263-60349282 MS.gene003264:CDS 50.0%
! GTCTCGTACTGATACTGCTG+AGG - chr2.4:60349142-60349161 MS.gene003264:CDS 50.0%
! GTGCGGAGGATCTAAAGCAT+TGG - chr2.4:60350103-60350122 MS.gene003264:CDS 50.0%
! TCGTACTGATACTGCTGAGG+AGG - chr2.4:60349145-60349164 MS.gene003264:CDS 50.0%
! TCTTGATTGGTCCCTTCGGT+AGG + chr2.4:60348357-60348376 None:intergenic 50.0%
! TTTGGGCCCGTTGTCATTTG+GGG + chr2.4:60349117-60349136 None:intergenic 50.0%
!! GGTATGGACTGGATGTTCAC+AGG - chr2.4:60349556-60349575 MS.gene003264:CDS 50.0%
!! GGTCCTAGCAGCTTTGAAAG+TGG + chr2.4:60348907-60348926 None:intergenic 50.0%
!!! AATCCTTTTCAGGTCCGCCT+TGG + chr2.4:60347596-60347615 None:intergenic 50.0%
ACAACAACTACGGGCCATGG+CGG - chr2.4:60347815-60347834 MS.gene003264:CDS 55.0%
ACTCCAAGGCGGACCTGAAA+AGG - chr2.4:60347590-60347609 MS.gene003264:CDS 55.0%
ACTGCTGAGGAGGGTGATCA+CGG - chr2.4:60349155-60349174 MS.gene003264:CDS 55.0%
AGCTGGTGACAACATGCAGG+AGG - chr2.4:60348563-60348582 MS.gene003264:CDS 55.0%
AGGCGCGTGGAACAATGCTT+AGG - chr2.4:60348583-60348602 MS.gene003264:CDS 55.0%
ATGGGGTCCTTACCTCAAGG+CGG - chr2.4:60348044-60348063 MS.gene003264:intron 55.0%
CGAAGGGACCAATCAAGAGG+AGG - chr2.4:60348359-60348378 MS.gene003264:CDS 55.0%
CGATACTCATGGCTCTCAGC+GGG + chr2.4:60349258-60349277 None:intergenic 55.0%
CGCGCAGGTTTCCCAAGAAT+CGG + chr2.4:60349294-60349313 None:intergenic 55.0%
CGCGTGGAACAATGCTTAGG+AGG - chr2.4:60348586-60348605 MS.gene003264:CDS 55.0%
GAAGATAAAACGGCGGGACC+TGG - chr2.4:60349224-60349243 MS.gene003264:CDS 55.0%
GAGGGAAGCAGGTGGATAAC+AGG - chr2.4:60348093-60348112 MS.gene003264:intron 55.0%
GAGGGTGATCACGGTAAGGA+AGG - chr2.4:60349164-60349183 MS.gene003264:CDS 55.0%
GATAGCTGGTTGGGTAGTGC+AGG - chr2.4:60350051-60350070 MS.gene003264:CDS 55.0%
GCTCTTGTAGGCTCGCATGT+AGG - chr2.4:60347769-60347788 MS.gene003264:CDS 55.0%
GGAAGCAGGTGGATAACAGG+CGG - chr2.4:60348096-60348115 MS.gene003264:intron 55.0%
GGAGGGCTACAAGACCTAAC+TGG - chr2.4:60349713-60349732 MS.gene003264:CDS 55.0%
GGATTCTTGATCGCAGCCCT+TGG - chr2.4:60347611-60347630 MS.gene003264:CDS 55.0%
GGCCACTCTTGAGACCAGAT+TGG - chr2.4:60347495-60347514 MS.gene003264:intron 55.0%
GGCGGAGGTTTATGCGAATC+AGG - chr2.4:60347833-60347852 MS.gene003264:CDS 55.0%
GGCTTCATGGACGAGAAGGT+TGG - chr2.4:60347745-60347764 MS.gene003264:CDS 55.0%
GGTGGGTCCCCAAATGACAA+CGG - chr2.4:60349107-60349126 MS.gene003264:CDS 55.0%
GTGGGTCCCCAAATGACAAC+GGG - chr2.4:60349108-60349127 MS.gene003264:CDS 55.0%
TAGTGCTCGCGGCTTCAGTA+GGG - chr2.4:60349082-60349101 MS.gene003264:CDS 55.0%
TCAGTAGGCGGCAACAAGGA+GGG - chr2.4:60348075-60348094 MS.gene003264:intron 55.0%
TCTAACAAGACCGGACCCGT+CGG + chr2.4:60348304-60348323 None:intergenic 55.0%
TGAGGAGGGTGATCACGGTA+AGG - chr2.4:60349160-60349179 MS.gene003264:CDS 55.0%
TGGAATGTCAACGGTCCGAC+GGG - chr2.4:60348286-60348305 MS.gene003264:intron 55.0%
TTCAGTAGGCGGCAACAAGG+AGG - chr2.4:60348074-60348093 MS.gene003264:intron 55.0%
! GGTTCTGGCCTCCTCTTGAT+TGG + chr2.4:60348370-60348389 None:intergenic 55.0%
! GTGGACTGAAGTGGACCCTA+TGG - chr2.4:60348326-60348345 MS.gene003264:intron 55.0%
!! ACGGGTCCGGTCTTGTTAGA+TGG - chr2.4:60348304-60348323 MS.gene003264:intron 55.0%
!! GGGGAGGTGCAGAAGCATTA+TGG - chr2.4:60348490-60348509 MS.gene003264:CDS 55.0%
!! GGTCCGGTCTTGTTAGATGG+TGG - chr2.4:60348307-60348326 MS.gene003264:intron 55.0%
AAAGCGCGCAAGCCAGCTGT+AGG - chr2.4:60349026-60349045 MS.gene003264:CDS 60.0%
AAGAGGGCGGTGGTATGGAC+TGG - chr2.4:60349545-60349564 MS.gene003264:CDS 60.0%
AGCTGACCCACTTGCAGCAC+CGG + chr2.4:60348928-60348947 None:intergenic 60.0%
ATTGGGCTGCGTCCTACAGC+TGG + chr2.4:60349041-60349060 None:intergenic 60.0%
CAACGCGACCTACAAGGCAC+AGG + chr2.4:60347453-60347472 None:intergenic 60.0%
CTAGTGCTCGCGGCTTCAGT+AGG - chr2.4:60349081-60349100 MS.gene003264:CDS 60.0%
CTGCTGGACCTGTGCCTTGT+AGG - chr2.4:60347442-60347461 MS.gene003264:intron 60.0%
CTTAGGCACTCCTCGTGCTG+TGG - chr2.4:60349822-60349841 MS.gene003264:CDS 60.0%
GCAACAAGGAGGGAAGCAGG+TGG - chr2.4:60348085-60348104 MS.gene003264:intron 60.0%
GGACGCAGCCCAATACAACC+TGG - chr2.4:60349047-60349066 MS.gene003264:CDS 60.0%
GGCGGCCGGAGTAACAATTC+CGG - chr2.4:60348114-60348133 MS.gene003264:intron 60.0%
GGTAAGGAAGGGCAGCAAGC+TGG - chr2.4:60349176-60349195 MS.gene003264:CDS 60.0%
GGTCCGCCTTGGAGTAAAGC+TGG + chr2.4:60347585-60347604 None:intergenic 60.0%
GTGCCTTGTAGGTCGCGTTG+TGG - chr2.4:60347453-60347472 MS.gene003264:intron 60.0%
TTGACAGAAGGGGCCCACCA+GGG - chr2.4:60348622-60348641 MS.gene003264:CDS 60.0%
TTTGACAGAAGGGGCCCACC+AGG - chr2.4:60348621-60348640 MS.gene003264:CDS 60.0%
!! CTAGGACCGGTGCTGCAAGT+GGG - chr2.4:60348919-60348938 MS.gene003264:CDS 60.0%
ACAACTACGGGCCATGGCGG+AGG - chr2.4:60347818-60347837 MS.gene003264:CDS 65.0%
AGGCACTCCTCGTGCTGTGG+AGG - chr2.4:60349825-60349844 MS.gene003264:CDS 65.0%
GAGCAATGGGGACCACCTGC+TGG + chr2.4:60348695-60348714 None:intergenic 65.0%
GCAGGTGGATAACAGGCGGC+CGG - chr2.4:60348100-60348119 MS.gene003264:intron 65.0%
GCGGCAACAAGGAGGGAAGC+AGG - chr2.4:60348082-60348101 MS.gene003264:intron 65.0%
GCGGCTTCAGTAGGGCAGGT+GGG - chr2.4:60349090-60349109 MS.gene003264:CDS 65.0%
TCCGGTGATCGGAGGGACGA+GGG - chr2.4:60348132-60348151 MS.gene003264:intron 65.0%
TGACAGAAGGGGCCCACCAG+GGG - chr2.4:60348623-60348642 MS.gene003264:CDS 65.0%
TGTCAACGGTCCGACGGGTC+CGG - chr2.4:60348291-60348310 MS.gene003264:intron 65.0%
TTCCGGTGATCGGAGGGACG+AGG - chr2.4:60348131-60348150 MS.gene003264:intron 65.0%
! CTCTCCTAGGCGGCTTGGCT+CGG + chr2.4:60348974-60348993 None:intergenic 65.0%
! GACAACATGCAGGAGGCGCG+TGG - chr2.4:60348570-60348589 MS.gene003264:CDS 65.0%
!! GCTAGGACCGGTGCTGCAAG+TGG - chr2.4:60348918-60348937 MS.gene003264:CDS 65.0%
!! GGGGACCACCTGCTGGTTTG+AGG + chr2.4:60348688-60348707 None:intergenic 65.0%
!! TAGGCGGCTTGGCTCGGCTT+GGG + chr2.4:60348968-60348987 None:intergenic 65.0%
AACGGCGGGACCTGGTAGCC+AGG - chr2.4:60349232-60349251 MS.gene003264:CDS 70.0%
CAAGCCGAGCCAAGCCGCCT+AGG - chr2.4:60348967-60348986 MS.gene003264:CDS 70.0%
CCCCTCGTCCCTCCGATCAC+CGG + chr2.4:60348136-60348155 None:intergenic 70.0%
CCGGTGATCGGAGGGACGAG+GGG - chr2.4:60348133-60348152 MS.gene003264:intron 70.0%
CGCGGCTTCAGTAGGGCAGG+TGG - chr2.4:60349089-60349108 MS.gene003264:CDS 70.0%
CTCATGGCTCTCAGCGGGCC+TGG + chr2.4:60349253-60349272 None:intergenic 70.0%
GCTCGCGGCTTCAGTAGGGC+AGG - chr2.4:60349086-60349105 MS.gene003264:CDS 70.0%
TCTCAGCGGGCCTGGCTACC+AGG + chr2.4:60349245-60349264 None:intergenic 70.0%
!! CTAGGCGGCTTGGCTCGGCT+TGG + chr2.4:60348969-60348988 None:intergenic 70.0%
GAAGGGGCCCACCAGGGGAC+AGG - chr2.4:60348628-60348647 MS.gene003264:CDS 75.0%
GGGGACAGGCGCGGCAAGCA+AGG - chr2.4:60348642-60348661 MS.gene003264:CDS 75.0%
TGCCGCGCCTGTCCCCTGGT+GGG + chr2.4:60348638-60348657 None:intergenic 75.0%
TGCTTGCCGCGCCTGTCCCC+TGG + chr2.4:60348642-60348661 None:intergenic 75.0%
TTGCCGCGCCTGTCCCCTGG+TGG + chr2.4:60348639-60348658 None:intergenic 75.0%
!! GCGGCTTGGCTCGGCTTGGG+AGG + chr2.4:60348965-60348984 None:intergenic 75.0%
! GGCCCACCAGGGGACAGGCG+CGG - chr2.4:60348633-60348652 MS.gene003264:CDS 80.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 60347373 60350229 60347373 ID=MS.gene003264
chr2.4 mRNA 60347373 60350229 60347373 ID=MS.gene003264.t1;Parent=MS.gene003264
chr2.4 exon 60348357 60350229 60348357 ID=MS.gene003264.t1.exon1;Parent=MS.gene003264.t1
chr2.4 CDS 60348357 60350229 60348357 ID=cds.MS.gene003264.t1;Parent=MS.gene003264.t1
chr2.4 exon 60347522 60348024 60347522 ID=MS.gene003264.t1.exon2;Parent=MS.gene003264.t1
chr2.4 CDS 60347522 60348024 60347522 ID=cds.MS.gene003264.t1;Parent=MS.gene003264.t1
chr2.4 exon 60347373 60347429 60347373 ID=MS.gene003264.t1.exon3;Parent=MS.gene003264.t1
chr2.4 CDS 60347373 60347429 60347373 ID=cds.MS.gene003264.t1;Parent=MS.gene003264.t1
Gene Sequence

>MS.gene003264

ATGGAGAACCTGAATCTCAATGCTGAGCATGGAGCTGATTCTCAACGACCGAATCTTACTCAAGCTGAGCTGCTGGACCTGTGCCTTGTAGGTCGCGTTGTGGTAAACAAGCCTATTCATCTGGCCACTCTTGAGACCAGATTGGGACCTATTTGGGAACCGAAATATCGCATGACCCTTATTCCCATGGAGGGCAACAAGTTCTTAGTCCAGCTTTACTCCAAGGCGGACCTGAAAAGGATTCTTGATCGCAGCCCTTGGTCGTTAGATAACAACATGATCATCCTGAAGAAAGTCGAGATTGGAGAAGAGCCGCTAACAAAATCCATGGATACCACAGAAATTTGGGCACAGATTCACCAATTGCCTTTTGGCTTCATGGACGAGAAGGTTGGAGCTCTTGTAGGCTCGCATGTAGGGAAGATGATTAAGTTTGATGAAGACAACAACTACGGGCCATGGCGGAGGTTTATGCGAATCAGGGTGGAAATTGCGTTGGATCAACCTTTACAACAAGAGTTGGTCATTGAGAGGGAAGAAGGAGATAGTATACGTCTTGCTATCAAATACGAGAAGCTGGGTAAGTTTTGTTATGTTTATGGCATTATAGGTCACTCTGAAAGCTTCTGCAGTGATAAGTTTGAAGATGGAGACGGTAGTAGCAAGAAGAAATGGGGTCCTTACCTCAAGGCGGAGAACAATTCAGTAGGCGGCAACAAGGAGGGAAGCAGGTGGATAACAGGCGGCCGGAGTAACAATTCCGGTGATCGGAGGGACGAGGGGACAACAATTAATGCTAATAATCATCACTCAATGTCAATTGATAATTGTGGTCTTTCCAGTCACAAATTATATGGGCGCATTAAAGTGAAAATTAATGCGGAATCTAGGTCGTTAACTTTTTTTCGTTACATGGAATGTCAACGGTCCGACGGGTCCGGTCTTGTTAGATGGTGGACTGAAGTGGACCCTATGGAGATTCCTACCGAAGGGACCAATCAAGAGGAGGCCAGAACCAGAACCAAAGTTTTTGCTCCGAATTTAACAAAGTCAGATCATGTTAACAAAGCATTAGCAGAAGGGATGAACGAAAAGGACGAATTTTTGTATGCACATGGGGGAGGTGCAGAAGCATTATGGAAGCTAATAGAATTGGAAGCCCAAAAGCAAGTAAGCCCACAAAATTCTACAGCTGGTGACAACATGCAGGAGGCGCGTGGAACAATGCTTAGGAGGGAGGATGCAGATTTTGACAGAAGGGGCCCACCAGGGGACAGGCGCGGCAAGCAAGGTCAACTTGCTCCCTTTGATTCCTCAAACCAGCAGGTGGTCCCCATTGCTCAACAATCATCACAACAATTAATGTTTAATCATAAGATGACCAGCGCGGAATACAGAAAATTGTTTGACAAGAATGCTGTGCCAATAAATGTTGTCTTTAAGTCTAATCATACTGTCATAAAAGTGCAAAAAGTTGATCAGTTTCAGAATTTGCTGTCAAATGGGAATGAAGAGCAATCAATTGTGTCTCCCACTTTCAAAGCTGCTAGGACCGGTGCTGCAAGTGGGTCAGCTAGAGACAAAAACTGCCTCCCAAGCCGAGCCAAGCCGCCTAGGAGAGATAAAGCTGTTGTTGTGTCTCAAGCTCTTGGGAAAGCGCGCAAGCCAGCTGTAGGACGCAGCCCAATACAACCTGGCTCATTTATGGCTAGTGCTCGCGGCTTCAGTAGGGCAGGTGGGTCCCCAAATGACAACGGGCCCAAAAAAAGGTCTCGTACTGATACTGCTGAGGAGGGTGATCACGGTAAGGAAGGGCAGCAAGCTGGAGCTGTCTACAACAATCCAGATTTTGAAGATAAAACGGCGGGACCTGGTAGCCAGGCCCGCTGAGAGCCATGAGTATCGTAGCATGGAATTGCCGATTCTTGGGAAACCTGCGCGTAATTCCTAAAATTAAATTCCTTGTTCGGTATTATAAACCGGATATCCTATTTCTGTCTGAAACTATTGTTGAAAGTAATAAAATCGAGGAATTTCGTTATCTTTTGGGTTATGATTCTTGTTTTGCACCTAATAGAATTAGTAGAGGTGGAGGCATCGCTTTATTTTGGCGTAACACGGTTAATTGCAGTATTATTAATTACTCGAATAACCATATTAGTGCTAAAATTGAAGAGGGCGGTGGTATGGACTGGATGTTCACAGGATTCTATGGATATCCAGAAACTGCTAGAAGAAGAGACTCATGGAATTTTATTCGGGGTCTTGCTAGACAAATAAGTTTACCTTGGTGTTTGATGGGGGACTTTAATGATATCCTTCACGTTGATGAAAAGAAAGGGAGGGCTACAAGACCTAACTGGCTTATCAGAGGGTTCCGTCAAGCCATTCAAGATGCTGGGCTTATTGATGTTCATATGGAAGGGTACCCTTTTACTTGGTTTAAAAGCTTAGGCACTCCTCGTGCTGTGGAGGAAAAGTTAGACCGAGCTTTAGTATCCAATTCTTGGATGCAGTTATTTCCCAATGCAAAGCTAGAAAATCTTGTTGCTCCATCCTCTGATCATTTCCCTATTTTGTTAGACAAAACTCCTGTGACTCGCAACAACAGAGTTGAGAGGAATTTCAAATTTGAGAATGCTTGGAGAATAGAGGAAGGGGTGTTTGATGTTGTTCGAGATAGCTGGTTGGGTAGTGCAGGGAGTAATGTTACTAATAAGCTTTCAAATTGTGCGGAGGATCTAAAGCATTGGAGTAAAACTCATTGCAACAAGCTTCAGGTTGATATCGAAAATTGTAGAAAACAACTCAGCAGAAGTCGCTCTATTCATGGAATTCAGGATGGCACTTACTTTGA
Protein sequence

>MS.gene003264.t1

MENLNLNAEHGADSQRPNLTQAELLDLCLVGRVVVNKPIHLATLETRLGPIWEPKYRMTLIPMEGNKFLVQLYSKADLKRILDRSPWSLDNNMIILKKVEIGEEPLTKSMDTTEIWAQIHQLPFGFMDEKVGALVGSHVGKMIKFDEDNNYGPWRRFMRIRVEIALDQPLQQELVIEREEGDSIRLAIKYEKLGKFCYVYGIIGHSESFCSDKFEDGDGSSKKKWGPYLKAENNSVGGNKEGSRWITGGRSNNSGDRRDEGTTINANNHHSMSIDNCGLSSHKLYGRIKVKINAESRSLTFFRYMECQRSDGSGLVRWWTEVDPMEIPTEGTNQEEARTRTKVFAPNLTKSDHVNKALAEGMNEKDEFLYAHGGGAEALWKLIELEAQKQVSPQNSTAGDNMQEARGTMLRREDADFDRRGPPGDRRGKQGQLAPFDSSNQQVVPIAQQSSQQLMFNHKMTSAEYRKLFDKNAVPINVVFKSNHTVIKVQKVDQFQNLLSNGNEEQSIVSPTFKAARTGAASGSARDKNCLPSRAKPPRRDKAVVVSQALGKARKPAVGRSPIQPGSFMASARGFSRAGGSPNDNGPKKRSRTDTAEEGDHGKEGQQAGAVYNNPDFEDKTAGPGFYGYPETARRRDSWNFIRGLARQISLPWCLMGDFNDILHVDEKKGRATRPNWLIRGFRQAIQDAGLIDVHMEGYPFTWFKSLGTPRAVEEKLDRALVSNSWMQLFPNAKLENLVAPSSDHFPILLDKTPVTRNNRVERNFKFENAWRIEEGVFDVVRDSWLGSAGSNKTTQQKSLYSWNSGWHLL