AlfalfaGEDB | MS.gene40828

M. sativa cultivar XinJiangDaYe / MS.gene40828

KEGG: -
GO: GO:0003674 GO:0003676 GO:0005488 GO:0008270 GO:0043167 GO:0043169 GO:0046872 GO:0046914 GO:0097159 GO:1901363
PFAM: PF14111.9 PF14392.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene40828.t1	AES70414.1	56.9	346	83	3	1	346	1	280	2.00E-96	362.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene40828.t1	O04244	27.9	136	94	2	83	216	6	139	5.5e-10	67.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene40828.t1	G7J017	56.9	346	83	3	1	346	1	280	1.5e-96	362.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene012748	MS.gene40828	PPI
MS.gene04134	MS.gene40828	PPI
MS.gene83979	MS.gene40828	PPI
MS.gene062067	MS.gene40828	PPI
MS.gene40828	MS.gene59460	PPI
MS.gene40828	MS.gene019165	PPI
MS.gene40828	MS.gene81194	PPI
MS.gene40828	MS.gene060773	PPI
MS.gene40828	MS.gene66650	PPI
MS.gene57044	MS.gene40828	PPI
MS.gene40828	MS.gene038394	PPI
MS.gene049610	MS.gene40828	PPI
MS.gene017586	MS.gene40828	PPI
MS.gene038676	MS.gene40828	PPI
MS.gene40828	MS.gene019001	PPI
MS.gene71637	MS.gene40828	PPI
MS.gene40828	MS.gene53904	PPI
MS.gene042651	MS.gene40828	PPI
MS.gene40828	MS.gene24070	PPI
MS.gene40828	MS.gene73261	PPI
MS.gene40828	MS.gene85538	PPI
MS.gene05576	MS.gene40828	PPI
MS.gene40828	MS.gene26844	PPI
MS.gene40828	MS.gene64178	PPI
MS.gene40828	MS.gene055546	PPI
MS.gene98467	MS.gene40828	PPI
MS.gene40828	MS.gene55209	PPI
MS.gene40828	MS.gene074257	PPI
MS.gene037049	MS.gene40828	PPI
MS.gene40828	MS.gene073573	PPI
MS.gene034643	MS.gene40828	PPI
MS.gene40828	MS.gene44144	PPI
MS.gene40828	MS.gene060718	PPI
MS.gene64130	MS.gene40828	PPI
MS.gene40828	MS.gene068629	PPI
MS.gene40828	MS.gene004417	PPI
MS.gene40828	MS.gene009781	PPI
MS.gene071784	MS.gene40828	PPI
MS.gene061579	MS.gene40828	PPI
MS.gene76420	MS.gene40828	PPI
MS.gene071320	MS.gene40828	PPI
MS.gene81712	MS.gene40828	PPI
MS.gene40828	MS.gene21066	PPI
MS.gene40828	MS.gene009213	PPI
MS.gene40828	MS.gene013890	PPI
MS.gene026680	MS.gene40828	PPI
MS.gene26433	MS.gene40828	PPI
MS.gene40828	MS.gene98127	PPI
MS.gene40828	MS.gene003264	PPI
MS.gene40828	MS.gene054652	PPI
MS.gene042559	MS.gene40828	PPI
MS.gene22200	MS.gene40828	PPI
MS.gene40828	MS.gene55682	PPI
MS.gene26038	MS.gene40828	PPI
MS.gene40828	MS.gene49057	PPI
MS.gene85308	MS.gene40828	PPI
MS.gene40828	MS.gene89815	PPI
MS.gene40828	MS.gene018474	PPI
MS.gene40828	MS.gene048088	PPI
MS.gene40828	MS.gene86868	PPI
MS.gene031967	MS.gene40828	PPI
MS.gene34812	MS.gene40828	PPI
MS.gene02896	MS.gene40828	PPI
MS.gene40828	MS.gene058889	PPI
MS.gene063214	MS.gene40828	PPI
MS.gene55682	MS.gene40828	PPI
MS.gene58419	MS.gene40828	PPI
MS.gene067340	MS.gene40828	PPI
MS.gene65623	MS.gene40828	PPI
MS.gene71675	MS.gene40828	PPI
MS.gene40828	MS.gene012889	PPI
MS.gene40828	MS.gene34463	PPI
MS.gene69495	MS.gene40828	PPI
MS.gene049512	MS.gene40828	PPI
MS.gene29406	MS.gene40828	PPI
MS.gene038623	MS.gene40828	PPI
MS.gene86275	MS.gene40828	PPI
MS.gene05357	MS.gene40828	PPI
MS.gene032311	MS.gene40828	PPI
MS.gene40828	MS.gene61499	PPI
MS.gene40828	MS.gene51804	PPI
MS.gene40828	MS.gene013644	PPI
MS.gene86849	MS.gene40828	PPI
MS.gene072852	MS.gene40828	PPI
MS.gene39956	MS.gene40828	PPI
MS.gene021968	MS.gene40828	PPI
MS.gene09589	MS.gene40828	PPI
MS.gene40828	MS.gene025675	PPI
MS.gene43393	MS.gene40828	PPI
MS.gene057828	MS.gene40828	PPI
MS.gene34197	MS.gene40828	PPI
MS.gene66650	MS.gene40828	PPI
MS.gene005120	MS.gene40828	PPI
MS.gene40828	MS.gene022929	PPI
MS.gene048072	MS.gene40828	PPI
MS.gene40828	MS.gene007022	PPI
MS.gene060386	MS.gene40828	PPI
MS.gene71588	MS.gene40828	PPI
MS.gene04749	MS.gene40828	PPI
MS.gene40828	MS.gene69584	PPI
MS.gene40828	MS.gene52349	PPI
MS.gene05436	MS.gene40828	PPI
MS.gene40828	MS.gene021647	PPI
MS.gene059736	MS.gene40828	PPI
MS.gene70932	MS.gene40828	PPI
MS.gene40828	MS.gene048342	PPI
MS.gene40828	MS.gene069624	PPI
MS.gene42903	MS.gene40828	PPI
MS.gene021965	MS.gene40828	PPI
MS.gene055683	MS.gene40828	PPI
MS.gene042614	MS.gene40828	PPI
MS.gene40828	MS.gene073582	PPI
MS.gene41643	MS.gene40828	PPI
MS.gene26844	MS.gene40828	PPI
MS.gene021555	MS.gene40828	PPI
MS.gene048747	MS.gene40828	PPI
MS.gene021647	MS.gene40828	PPI
MS.gene40828	MS.gene016719	PPI
MS.gene40828	MS.gene028714	PPI
MS.gene40828	MS.gene88393	PPI
MS.gene40828	MS.gene048706	PPI
MS.gene40828	MS.gene69586	PPI
MS.gene40828	MS.gene45083	PPI
MS.gene40828	MS.gene049561	PPI
MS.gene40828	MS.gene008658	PPI
MS.gene009121	MS.gene40828	PPI
MS.gene40828	MS.gene63150	PPI
MS.gene94654	MS.gene40828	PPI
MS.gene51804	MS.gene40828	PPI
MS.gene36069	MS.gene40828	PPI
MS.gene40828	MS.gene072852	PPI
MS.gene40828	MS.gene08708	PPI
MS.gene97410	MS.gene40828	PPI
MS.gene83772	MS.gene40828	PPI
MS.gene32415	MS.gene40828	PPI
MS.gene40828	MS.gene06164	PPI
MS.gene40828	MS.gene50392	PPI
MS.gene40828	MS.gene86275	PPI
MS.gene40828	MS.gene22730	PPI
MS.gene035626	MS.gene40828	PPI
MS.gene008927	MS.gene40828	PPI
MS.gene045614	MS.gene40828	PPI
MS.gene40828	MS.gene017586	PPI
MS.gene40828	MS.gene037634	PPI
MS.gene40828	MS.gene057828	PPI
MS.gene63762	MS.gene40828	PPI
MS.gene40828	MS.gene08606	PPI
MS.gene30208	MS.gene40828	PPI
MS.gene40828	MS.gene000640	PPI
MS.gene40828	MS.gene000506	PPI
MS.gene40828	MS.gene98756	PPI
MS.gene013676	MS.gene40828	PPI
MS.gene40828	MS.gene028716	PPI
MS.gene40828	MS.gene74639	PPI
MS.gene40828	MS.gene071133	PPI
MS.gene40828	MS.gene60266	PPI
MS.gene030090	MS.gene40828	PPI
MS.gene95561	MS.gene40828	PPI
MS.gene40828	MS.gene98467	PPI
MS.gene96174	MS.gene40828	PPI
MS.gene018196	MS.gene40828	PPI
MS.gene40828	MS.gene024522	PPI
MS.gene40828	MS.gene54051	PPI
MS.gene065627	MS.gene40828	PPI
MS.gene40828	MS.gene22111	PPI
MS.gene40828	MS.gene049610	PPI
MS.gene57019	MS.gene40828	PPI
MS.gene40828	MS.gene010290	PPI
MS.gene018745	MS.gene40828	PPI
MS.gene40828	MS.gene37955	PPI
MS.gene65546	MS.gene40828	PPI
MS.gene40828	MS.gene92517	PPI
MS.gene40828	MS.gene045875	PPI
MS.gene40828	MS.gene010890	PPI
MS.gene40828	MS.gene84790	PPI
MS.gene03936	MS.gene40828	PPI
MS.gene038098	MS.gene40828	PPI
MS.gene60059	MS.gene40828	PPI
MS.gene40828	MS.gene039692	PPI
MS.gene40828	MS.gene002590	PPI
MS.gene28718	MS.gene40828	PPI
MS.gene055560	MS.gene40828	PPI
MS.gene008275	MS.gene40828	PPI
MS.gene40828	MS.gene060788	PPI
MS.gene40828	MS.gene41643	PPI
MS.gene40828	MS.gene77990	PPI
MS.gene038757	MS.gene40828	PPI
MS.gene40828	MS.gene062511	PPI
MS.gene064966	MS.gene40828	PPI
MS.gene40828	MS.gene027994	PPI
MS.gene40828	MS.gene059269	PPI
MS.gene40828	MS.gene46353	PPI
MS.gene43924	MS.gene40828	PPI
MS.gene046089	MS.gene40828	PPI
MS.gene047954	MS.gene40828	PPI
MS.gene35175	MS.gene40828	PPI
MS.gene036423	MS.gene40828	PPI
MS.gene40828	MS.gene51799	PPI
MS.gene40828	MS.gene61651	PPI
MS.gene013644	MS.gene40828	PPI
MS.gene72520	MS.gene40828	PPI
MS.gene66651	MS.gene40828	PPI
MS.gene96109	MS.gene40828	PPI
MS.gene40828	MS.gene09023	PPI
MS.gene40828	MS.gene054508	PPI
MS.gene40828	MS.gene025987	PPI
MS.gene35202	MS.gene40828	PPI
MS.gene40828	MS.gene053373	PPI
MS.gene051449	MS.gene40828	PPI
MS.gene40828	MS.gene043140	PPI
MS.gene63743	MS.gene40828	PPI
MS.gene48477	MS.gene40828	PPI
MS.gene40828	MS.gene29321	PPI
MS.gene045875	MS.gene40828	PPI
MS.gene40828	MS.gene65474	PPI
MS.gene30136	MS.gene40828	PPI
MS.gene40828	MS.gene025401	PPI
MS.gene40828	MS.gene015093	PPI
MS.gene008861	MS.gene40828	PPI
MS.gene61452	MS.gene40828	PPI
MS.gene40828	MS.gene24278	PPI
MS.gene40828	MS.gene000379	PPI
MS.gene40828	MS.gene34618	PPI
MS.gene40828	MS.gene032299	PPI
MS.gene016102	MS.gene40828	PPI
MS.gene46941	MS.gene40828	PPI
MS.gene96541	MS.gene40828	PPI
MS.gene000634	MS.gene40828	PPI
MS.gene85295	MS.gene40828	PPI
MS.gene47792	MS.gene40828	PPI
MS.gene46948	MS.gene40828	PPI
MS.gene98471	MS.gene40828	PPI
MS.gene40828	MS.gene08713	PPI
MS.gene025873	MS.gene40828	PPI
MS.gene012019	MS.gene40828	PPI
MS.gene40828	MS.gene09517	PPI
MS.gene40828	MS.gene87845	PPI
MS.gene05358	MS.gene40828	PPI
MS.gene93396	MS.gene40828	PPI
MS.gene40828	MS.gene62249	PPI
MS.gene074257	MS.gene40828	PPI
MS.gene05231	MS.gene40828	PPI
MS.gene010656	MS.gene40828	PPI
MS.gene000629	MS.gene40828	PPI
MS.gene041264	MS.gene40828	PPI
MS.gene41979	MS.gene40828	PPI
MS.gene40828	MS.gene044729	PPI
MS.gene05319	MS.gene40828	PPI
MS.gene56991	MS.gene40828	PPI
MS.gene050679	MS.gene40828	PPI
MS.gene40828	MS.gene95960	PPI
MS.gene40828	MS.gene60390	PPI
MS.gene20246	MS.gene40828	PPI
MS.gene055223	MS.gene40828	PPI
MS.gene40828	MS.gene027169	PPI
MS.gene28545	MS.gene40828	PPI
MS.gene40828	MS.gene019177	PPI
MS.gene053747	MS.gene40828	PPI
MS.gene65471	MS.gene40828	PPI
MS.gene061850	MS.gene40828	PPI
MS.gene40828	MS.gene055560	PPI
MS.gene40828	MS.gene024297	PPI
MS.gene40828	MS.gene057934	PPI
MS.gene40828	MS.gene37537	PPI
MS.gene40828	MS.gene024841	PPI
MS.gene40828	MS.gene069786	PPI
MS.gene073582	MS.gene40828	PPI
MS.gene058889	MS.gene40828	PPI
MS.gene40828	MS.gene42010	PPI
MS.gene40828	MS.gene025158	PPI
MS.gene98616	MS.gene40828	PPI
MS.gene40828	MS.gene27329	PPI
MS.gene40828	MS.gene41393	PPI
MS.gene042027	MS.gene40828	PPI
MS.gene69490	MS.gene40828	PPI
MS.gene40828	MS.gene016632	PPI
MS.gene015248	MS.gene40828	PPI
MS.gene80362	MS.gene40828	PPI
MS.gene44083	MS.gene40828	PPI
MS.gene40828	MS.gene40469	PPI
MS.gene013193	MS.gene40828	PPI
MS.gene40828	MS.gene96163	PPI
MS.gene04970	MS.gene40828	PPI
MS.gene08106	MS.gene40828	PPI
MS.gene40828	MS.gene03149	PPI
MS.gene23521	MS.gene40828	PPI
MS.gene40828	MS.gene037049	PPI
MS.gene87529	MS.gene40828	PPI
MS.gene024405	MS.gene40828	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene40828.t1	MTR_3g053920	56.936	346	83	3	1	346	1	280	2.29e-124	361
MS.gene40828.t1	MTR_2g061500	82.171	129	23	0	1	129	1	129	8.00e-75	229
MS.gene40828.t1	MTR_4g103530	80.412	97	19	0	55	151	1	97	5.53e-52	172
MS.gene40828.t1	MTR_4g103530	56.061	66	29	0	251	316	119	184	3.09e-16	77.0
MS.gene40828.t1	MTR_7g011710	67.045	88	29	0	55	142	1	88	9.97e-37	131
MS.gene40828.t1	MTR_0010s0370	36.517	178	101	4	8	177	4	177	3.93e-30	115
MS.gene40828.t1	MTR_0010s0350	36.517	178	101	4	8	177	4	177	3.93e-30	115
MS.gene40828.t1	MTR_6g033215	32.749	171	113	1	31	199	124	294	1.13e-29	117
MS.gene40828.t1	MTR_8g463110	56.198	121	50	2	289	408	1	119	2.61e-23	102
MS.gene40828.t1	MTR_1g036720	34.862	109	69	1	7	113	3	111	1.22e-15	72.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene40828.t1	AT2G17920	28.372	215	144	5	8	216	9	219	1.12e-17	83.6
MS.gene40828.t1	AT2G41590	29.861	144	93	3	77	216	80	219	4.11e-16	79.7
MS.gene40828.t1	AT3G31430	28.646	192	125	5	30	215	126	311	2.45e-15	77.0
MS.gene40828.t1	AT5G36228	28.481	158	106	3	75	227	78	233	2.53e-15	77.4
MS.gene40828.t1	AT2G13450	28.061	196	131	5	27	215	26	218	4.33e-15	77.0
MS.gene40828.t1	AT3G57587	28.873	142	97	2	77	216	80	219	5.82e-15	76.3
MS.gene40828.t1	AT5G18636	23.902	205	145	5	77	277	80	277	3.46e-14	73.9
MS.gene40828.t1	AT2G02103	27.322	183	129	2	36	216	39	219	6.42e-14	73.2
MS.gene40828.t1	AT5G25200	27.083	144	97	3	77	216	80	219	8.03e-14	72.8
MS.gene40828.t1	AT3G47920	28.169	142	98	2	77	216	9	148	4.08e-13	70.1

Find 124 sgRNAs with CRISPR-Local

Find 136 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCCTAAACCATATCGATTTC+TGG	0.153865	1.2:+59865541	MS.gene40828:CDS
CAGGCTCGGTTTCAAGATTA+AGG	0.191734	1.2:-59865251	None:intergenic
CAAGTCCATGGTTTGCCTTT+TGG	0.220706	1.2:+59865567	MS.gene40828:CDS
AGCATCCTGTCATTGAAATT+TGG	0.246745	1.2:-59866041	None:intergenic
AACCCGTTTGACTGGCTTCC+AGG	0.249150	1.2:-59865367	None:intergenic
CGACATACGCTCGCTGAAAT+AGG	0.271549	1.2:-59865340	None:intergenic
ATTTGCTGCTGAAGGGGAAT+TGG	0.281718	1.2:+59866355	MS.gene40828:CDS
ACCTGTGGTGCTTGGCTTAC+CGG	0.291495	1.2:+59866223	MS.gene40828:CDS
TAGGCATTGATGTTAGTATT+GGG	0.301465	1.2:+59866390	MS.gene40828:CDS
CTGATGATGGTGTACGAAAC+TGG	0.316148	1.2:+59865862	MS.gene40828:CDS
CCTTCAAACCTCAACCTTGC+TGG	0.317012	1.2:+59865201	MS.gene40828:CDS
CCCAGAAATCGATATGGTTT+AGG	0.321505	1.2:-59865542	None:intergenic
ACAAAGCTCGGGACGACGTC+GGG	0.323687	1.2:-59865516	None:intergenic
TCGAGAATGGCAGTGGGTTC+AGG	0.326911	1.2:-59865270	None:intergenic
TCCTAGACCTTGACCTACTT+TGG	0.341730	1.2:-59865601	None:intergenic
CCTAGACCTTGACCTACTTT+GGG	0.343147	1.2:-59865600	None:intergenic
CCAGAAATCGATATGGTTTA+GGG	0.345457	1.2:-59865541	None:intergenic
CTTGTTTCAGTTCCATCATA+AGG	0.363309	1.2:+59865419	MS.gene40828:CDS
ATTCTCGAAAACTGTTTGAT+TGG	0.382332	1.2:+59865285	MS.gene40828:CDS
TGATTGCAGTTATTTGAGTT+TGG	0.383927	1.2:-59866070	None:intergenic
GAATTGGGAAACAATGTAAT+AGG	0.387482	1.2:+59866371	MS.gene40828:CDS
TTACCTTGCGACATAGTTGC+AGG	0.387784	1.2:-59865957	None:intergenic
TCTCATGATGATACCGATAC+TGG	0.390725	1.2:+59866278	MS.gene40828:CDS
AATTGTGTTCCGGCCATCAT+AGG	0.392406	1.2:-59865646	None:intergenic
CTTGCACCCAGAAATCGATA+TGG	0.406053	1.2:-59865548	None:intergenic
TTTGCTGCTGAAGGGGAATT+GGG	0.409241	1.2:+59866356	MS.gene40828:CDS
GCTCGCTGAAATAGGCAAAC+TGG	0.409343	1.2:-59865332	None:intergenic
GCTTCCAATGCAACTGCTGC+AGG	0.410939	1.2:+59866005	MS.gene40828:CDS
GTGATCGTAACCCGTTTGAC+TGG	0.416613	1.2:-59865375	None:intergenic
GCGACATAGTTGCAGGAATA+GGG	0.417434	1.2:-59865950	None:intergenic
CCAGCAAGGTTGAGGTTTGA+AGG	0.420107	1.2:-59865201	None:intergenic
TGCGACATAGTTGCAGGAAT+AGG	0.423523	1.2:-59865951	None:intergenic
TGTCACAGGTGTGGGCTGAT+TGG	0.436701	1.2:+59865798	MS.gene40828:CDS
TCCAACCAACCTGTGGTGCT+TGG	0.438236	1.2:+59866215	MS.gene40828:CDS
CCTAAACCATATCGATTTCT+GGG	0.441473	1.2:+59865542	MS.gene40828:CDS
GCTGTCCCTACCACACATGC+TGG	0.442170	1.2:+59866245	MS.gene40828:CDS
ATAGGCATTGATGTTAGTAT+TGG	0.444192	1.2:+59866389	MS.gene40828:CDS
AGGCTCGGTTTCAAGATTAA+GGG	0.445673	1.2:-59865250	None:intergenic
CTGGTTCTGAATTGAAGAAA+AGG	0.450429	1.2:+59866297	MS.gene40828:CDS
GTGCCAACACGTTGAGCAGC+AGG	0.454461	1.2:-59865900	None:intergenic
AGGCACTATGAATTGTGTTC+CGG	0.463677	1.2:-59865656	None:intergenic
TGGTTTAGGGGCACAAAGCT+CGG	0.468910	1.2:-59865528	None:intergenic
GAGTTAAACCAGCAAGGTTG+AGG	0.471146	1.2:-59865209	None:intergenic
GCGAGCGTATGTCGCGAGCC+TGG	0.475977	1.2:+59865349	MS.gene40828:CDS
GGTATAGGTACTGGTTTCTC+TGG	0.478677	1.2:+59866137	MS.gene40828:CDS
GGTTTAGGGGCACAAAGCTC+GGG	0.484462	1.2:-59865527	None:intergenic
ACAACCACGGACCTTCATCT+AGG	0.489467	1.2:-59865458	None:intergenic
AGCCTGGAAGCCAGTCAAAC+GGG	0.491071	1.2:+59865365	MS.gene40828:CDS
GATTTCTGGGTGCAAGTCCA+TGG	0.495937	1.2:+59865555	MS.gene40828:CDS
TCATACAGACAAGGTGTGTC+CGG	0.496709	1.2:+59865821	MS.gene40828:CDS
TTGGGTTGAATGAATCCAAA+AGG	0.497922	1.2:-59865582	None:intergenic
ATGAAACAAGGTATAGGTAC+TGG	0.504880	1.2:+59866128	MS.gene40828:CDS
GTTGAGGTTTGAAGGATCCA+TGG	0.507987	1.2:-59865193	None:intergenic
CAAAAGAGCCGTTGCTAGCA+CGG	0.508271	1.2:-59865737	None:intergenic
GCATGTGTGGTAGGGACAGC+CGG	0.513664	1.2:-59866242	None:intergenic
GAGCCTGGAAGCCAGTCAAA+CGG	0.514466	1.2:+59865364	MS.gene40828:CDS
GGCACCTGCAGCAGTTGCAT+TGG	0.516522	1.2:-59866009	None:intergenic
GGATTCATTCAACCCAAAGT+AGG	0.516836	1.2:+59865588	MS.gene40828:CDS
CTGAATTGAAGAAAAGGAAA+CGG	0.519643	1.2:+59866303	MS.gene40828:CDS
GCCAAGCACCACAGGTTGGT+TGG	0.519799	1.2:-59866216	None:intergenic
GTGTCCGGAGCTGTATGAAT+TGG	0.521204	1.2:+59865836	MS.gene40828:CDS
CTTCAATTCAGAACCAGTAT+CGG	0.523702	1.2:-59866291	None:intergenic
CAAGGTCTAGGAAGTTTCCT+TGG	0.524197	1.2:+59865612	MS.gene40828:CDS
AGGCATTGATGTTAGTATTG+GGG	0.524483	1.2:+59866391	MS.gene40828:CDS
CGACCTGCTGCTCAACGTGT+TGG	0.525821	1.2:+59865897	MS.gene40828:CDS
AATGGCAGTGGGTTCAGGCT+CGG	0.526571	1.2:-59865265	None:intergenic
ACCAACACATTTGCTGCTGA+AGG	0.529001	1.2:+59866347	MS.gene40828:CDS
AGGTTGGTTGGACAGCAAGC+TGG	0.529398	1.2:-59866204	None:intergenic
CTGTCCCTACCACACATGCT+GGG	0.531757	1.2:+59866246	MS.gene40828:CDS
TGGTTTAACTCTGTCTGAGG+AGG	0.532108	1.2:+59865221	MS.gene40828:CDS
CAACACATTTGCTGCTGAAG+GGG	0.533197	1.2:+59866349	MS.gene40828:CDS
TGATGATGGTGTACGAAACT+GGG	0.533607	1.2:+59865863	MS.gene40828:CDS
CTCCTAAGTCCTATGATGGC+CGG	0.535617	1.2:+59865637	MS.gene40828:CDS
TATGAATTGGACTCTGATGA+TGG	0.543306	1.2:+59865849	MS.gene40828:CDS
GAGTGGCATCCACCTTATGA+TGG	0.544576	1.2:-59865431	None:intergenic
GGCATTGATGTTAGTATTGG+GGG	0.548557	1.2:+59866392	MS.gene40828:CDS
GCCGGTAAGCCAAGCACCAC+AGG	0.548921	1.2:-59866224	None:intergenic
CTGTGCCAAATTTCAATGAC+AGG	0.551379	1.2:+59866036	MS.gene40828:CDS
TGATAACTTTCATATAGCAC+TGG	0.552206	1.2:+59865482	MS.gene40828:CDS
GCCACTCGTGTCCTAGATGA+AGG	0.553709	1.2:+59865447	MS.gene40828:CDS
GCACTGCTGCAACAAATCGT+TGG	0.554627	1.2:+59865919	MS.gene40828:CDS
CACAAAGCTCGGGACGACGT+CGG	0.562119	1.2:-59865517	None:intergenic
CCCTTCAGCAGCAAATGTGT+TGG	0.563529	1.2:-59866348	None:intergenic
CCCAAAGTAGGTCAAGGTCT+AGG	0.565295	1.2:+59865600	MS.gene40828:CDS
GAGTCCAATTCATACAGCTC+CGG	0.566714	1.2:-59865840	None:intergenic
TCACACCCAGCATGTGTGGT+AGG	0.567245	1.2:-59866251	None:intergenic
TGCTGGTTTAACTCTGTCTG+AGG	0.573494	1.2:+59865218	MS.gene40828:CDS
CCAACACATTTGCTGCTGAA+GGG	0.580009	1.2:+59866348	MS.gene40828:CDS
GGTTTAACTCTGTCTGAGGA+GGG	0.582639	1.2:+59865222	MS.gene40828:CDS
ATGTGTTGGTAGCATTCTGA+AGG	0.584524	1.2:-59866334	None:intergenic
CACACCCAGCATGTGTGGTA+GGG	0.585474	1.2:-59866250	None:intergenic
GGTACTCCTAAGTCCTATGA+TGG	0.585551	1.2:+59865633	MS.gene40828:CDS
TTGAGGTTTGAAGGATCCAT+GGG	0.589313	1.2:-59865192	None:intergenic
TGGCGTGTCCGTGCTAGCAA+CGG	0.590091	1.2:+59865729	MS.gene40828:CDS
CAAGGTAACAATACTGCTAG+TGG	0.591921	1.2:+59865972	MS.gene40828:CDS
TTCATCACACCCAGCATGTG+TGG	0.595941	1.2:-59866255	None:intergenic
TTCCGGCCATCATAGGACTT+AGG	0.598914	1.2:-59865639	None:intergenic
CTTGCTGTCCAACCAACCTG+TGG	0.600306	1.2:+59866208	MS.gene40828:CDS
GCATTGATGTTAGTATTGGG+GGG	0.602232	1.2:+59866393	MS.gene40828:CDS
GAATTGCATGTGGAGGAAGA+AGG	0.603344	1.2:-59866176	None:intergenic
GTTTCAGTTCCATCATAAGG+TGG	0.609100	1.2:+59865422	MS.gene40828:CDS
ATTCAACCCAAAGTAGGTCA+AGG	0.610510	1.2:+59865594	MS.gene40828:CDS
CACGTTGAGCAGCAGGTCGG+AGG	0.612061	1.2:-59865893	None:intergenic
ATTGAAATTTGGCACAGCAG+CGG	0.616691	1.2:-59866030	None:intergenic
TGAATCCAAAAGGCAAACCA+TGG	0.619002	1.2:-59865572	None:intergenic
ATTCCTGCAACTATGTCGCA+AGG	0.631537	1.2:+59865954	MS.gene40828:CDS
GGTAACAATACTGCTAGTGG+TGG	0.644999	1.2:+59865975	MS.gene40828:CDS
TGCCTACATGCGTATCAAAG+TGG	0.646742	1.2:+59865674	MS.gene40828:CDS
TTGGTTGGACAGCAAGCTGG+AGG	0.648414	1.2:-59866201	None:intergenic
GGAGGTCGAATTGCATGTGG+AGG	0.654577	1.2:-59866183	None:intergenic
GCTGGAGGTCGAATTGCATG+TGG	0.656858	1.2:-59866186	None:intergenic
CAGACAGAGTTAAACCAGCA+AGG	0.669821	1.2:-59865215	None:intergenic
TAACGGCACAGTAACATCAG+CGG	0.674059	1.2:-59865697	None:intergenic
GTGTCCTAGATGAAGGTCCG+TGG	0.675720	1.2:+59865454	MS.gene40828:CDS
GTAAGCCAAGCACCACAGGT+TGG	0.677944	1.2:-59866220	None:intergenic
CAGAAATCGATATGGTTTAG+GGG	0.682672	1.2:-59865540	None:intergenic
CAAAGCTCGGGACGACGTCG+GGG	0.683751	1.2:-59865515	None:intergenic
ACCTTCATCTAGGACACGAG+TGG	0.684214	1.2:-59865448	None:intergenic
CATAGGACTTAGGAGTACCA+AGG	0.688811	1.2:-59865629	None:intergenic
GGCCACTTTGATACGCATGT+AGG	0.689340	1.2:-59865676	None:intergenic
CAACACGTTGAGCAGCAGGT+CGG	0.691694	1.2:-59865896	None:intergenic
GATGATGGTGTACGAAACTG+GGG	0.710399	1.2:+59865864	MS.gene40828:CDS
GCTGATTGGTCATACAGACA+AGG	0.713586	1.2:+59865812	MS.gene40828:CDS
TGAAAGTTATCATACAACCA+CGG	0.735906	1.2:-59865471	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	ATTCTCGAAAACTGTTTGAT+TGG	+	chr1.2:59865285-59865304	MS.gene40828:CDS	30.0%
	CTGAATTGAAGAAAAGGAAA+CGG	+	chr1.2:59866303-59866322	MS.gene40828:CDS	30.0%
	GAATTGGGAAACAATGTAAT+AGG	+	chr1.2:59866371-59866390	MS.gene40828:CDS	30.0%
	GCAAAAATGAAACAAGGTAT+AGG	+	chr1.2:59866122-59866141	MS.gene40828:CDS	30.0%
	TGAAAGTTATCATACAACCA+CGG	-	chr1.2:59865474-59865493	None:intergenic	30.0%
	TGATAACTTTCATATAGCAC+TGG	+	chr1.2:59865482-59865501	MS.gene40828:CDS	30.0%
!	TGATTGCAGTTATTTGAGTT+TGG	-	chr1.2:59866073-59866092	None:intergenic	30.0%
!!	AATCAAACAGTTTTCGAGAA+TGG	-	chr1.2:59865286-59865305	None:intergenic	30.0%
!!	ATAGGCATTGATGTTAGTAT+TGG	+	chr1.2:59866389-59866408	MS.gene40828:CDS	30.0%
!!	TAGGCATTGATGTTAGTATT+GGG	+	chr1.2:59866390-59866409	MS.gene40828:CDS	30.0%
!!!	ACACGCCATTCTTTTTTTAA+CGG	-	chr1.2:59865717-59865736	None:intergenic	30.0%
	ACCACTGCAAAAATGAAACA+AGG	+	chr1.2:59866116-59866135	MS.gene40828:CDS	35.0%
	AGCATCCTGTCATTGAAATT+TGG	-	chr1.2:59866044-59866063	None:intergenic	35.0%
	ATGAAACAAGGTATAGGTAC+TGG	+	chr1.2:59866128-59866147	MS.gene40828:CDS	35.0%
	CAGAAATCGATATGGTTTAG+GGG	-	chr1.2:59865543-59865562	None:intergenic	35.0%
	CCAGAAATCGATATGGTTTA+GGG	-	chr1.2:59865544-59865563	None:intergenic	35.0%
	CTTCAATTCAGAACCAGTAT+CGG	-	chr1.2:59866294-59866313	None:intergenic	35.0%
	CTTGTTTCAGTTCCATCATA+AGG	+	chr1.2:59865419-59865438	MS.gene40828:CDS	35.0%
	TATGAATTGGACTCTGATGA+TGG	+	chr1.2:59865849-59865868	MS.gene40828:CDS	35.0%
!	CTGTGCCGTTAAAAAAAGAA+TGG	+	chr1.2:59865709-59865728	MS.gene40828:CDS	35.0%
!!	ACCTTGTTTCATTTTTGCAG+TGG	-	chr1.2:59866120-59866139	None:intergenic	35.0%
!!	AGGCATTGATGTTAGTATTG+GGG	+	chr1.2:59866391-59866410	MS.gene40828:CDS	35.0%
!!	CCTAAACCATATCGATTTCT+GGG	+	chr1.2:59865542-59865561	MS.gene40828:CDS	35.0%
!!	CTGGTTCTGAATTGAAGAAA+AGG	+	chr1.2:59866297-59866316	MS.gene40828:CDS	35.0%
!!	TTGGGTTGAATGAATCCAAA+AGG	-	chr1.2:59865585-59865604	None:intergenic	35.0%
!!!	AATTGGGTGTTTTTTGTCAC+AGG	+	chr1.2:59865784-59865803	MS.gene40828:CDS	35.0%
	AGGCACTATGAATTGTGTTC+CGG	-	chr1.2:59865659-59865678	None:intergenic	40.0%
	ATTCAACCCAAAGTAGGTCA+AGG	+	chr1.2:59865594-59865613	MS.gene40828:CDS	40.0%
	ATTGAAATTTGGCACAGCAG+CGG	-	chr1.2:59866033-59866052	None:intergenic	40.0%
	CAAGGTAACAATACTGCTAG+TGG	+	chr1.2:59865972-59865991	MS.gene40828:CDS	40.0%
	CCCAGAAATCGATATGGTTT+AGG	-	chr1.2:59865545-59865564	None:intergenic	40.0%
	CTGTGCCAAATTTCAATGAC+AGG	+	chr1.2:59866036-59866055	MS.gene40828:CDS	40.0%
	GGATTCATTCAACCCAAAGT+AGG	+	chr1.2:59865588-59865607	MS.gene40828:CDS	40.0%
	GTTTCAGTTCCATCATAAGG+TGG	+	chr1.2:59865422-59865441	MS.gene40828:CDS	40.0%
	TCTCATGATGATACCGATAC+TGG	+	chr1.2:59866278-59866297	MS.gene40828:CDS	40.0%
	TGAATCCAAAAGGCAAACCA+TGG	-	chr1.2:59865575-59865594	None:intergenic	40.0%
!	AGGCTCGGTTTCAAGATTAA+GGG	-	chr1.2:59865253-59865272	None:intergenic	40.0%
!	GCATTGATGTTAGTATTGGG+GGG	+	chr1.2:59866393-59866412	MS.gene40828:CDS	40.0%
!!	ATGTGTTGGTAGCATTCTGA+AGG	-	chr1.2:59866337-59866356	None:intergenic	40.0%
!!	CCCTAAACCATATCGATTTC+TGG	+	chr1.2:59865541-59865560	MS.gene40828:CDS	40.0%
!!	GGCATTGATGTTAGTATTGG+GGG	+	chr1.2:59866392-59866411	MS.gene40828:CDS	40.0%
!!	GTTTCATTTTTGCAGTGGTC+TGG	-	chr1.2:59866115-59866134	None:intergenic	40.0%
!!	TGATGATGGTGTACGAAACT+GGG	+	chr1.2:59865863-59865882	MS.gene40828:CDS	40.0%
!!!	GTGTTTTTTGTCACAGGTGT+GGG	+	chr1.2:59865790-59865809	MS.gene40828:CDS	40.0%
	AATTGTGTTCCGGCCATCAT+AGG	-	chr1.2:59865649-59865668	None:intergenic	45.0%
	ATTCCTGCAACTATGTCGCA+AGG	+	chr1.2:59865954-59865973	MS.gene40828:CDS	45.0%
	CAAGGTCTAGGAAGTTTCCT+TGG	+	chr1.2:59865612-59865631	MS.gene40828:CDS	45.0%
	CAGACAGAGTTAAACCAGCA+AGG	-	chr1.2:59865218-59865237	None:intergenic	45.0%
	CCTAGACCTTGACCTACTTT+GGG	-	chr1.2:59865603-59865622	None:intergenic	45.0%
	CTTGCACCCAGAAATCGATA+TGG	-	chr1.2:59865551-59865570	None:intergenic	45.0%
	GAATTGCATGTGGAGGAAGA+AGG	-	chr1.2:59866179-59866198	None:intergenic	45.0%
	GAGTCCAATTCATACAGCTC+CGG	-	chr1.2:59865843-59865862	None:intergenic	45.0%
	GAGTTAAACCAGCAAGGTTG+AGG	-	chr1.2:59865212-59865231	None:intergenic	45.0%
	GCGACATAGTTGCAGGAATA+GGG	-	chr1.2:59865953-59865972	None:intergenic	45.0%
	GGTAACAATACTGCTAGTGG+TGG	+	chr1.2:59865975-59865994	MS.gene40828:CDS	45.0%
	GGTACTCCTAAGTCCTATGA+TGG	+	chr1.2:59865633-59865652	MS.gene40828:CDS	45.0%
	GGTTTAACTCTGTCTGAGGA+GGG	+	chr1.2:59865222-59865241	MS.gene40828:CDS	45.0%
	TAACGGCACAGTAACATCAG+CGG	-	chr1.2:59865700-59865719	None:intergenic	45.0%
	TCATACAGACAAGGTGTGTC+CGG	+	chr1.2:59865821-59865840	MS.gene40828:CDS	45.0%
	TCCTAGACCTTGACCTACTT+TGG	-	chr1.2:59865604-59865623	None:intergenic	45.0%
	TGCCTACATGCGTATCAAAG+TGG	+	chr1.2:59865674-59865693	MS.gene40828:CDS	45.0%
	TGCGACATAGTTGCAGGAAT+AGG	-	chr1.2:59865954-59865973	None:intergenic	45.0%
	TGGTTTAACTCTGTCTGAGG+AGG	+	chr1.2:59865221-59865240	MS.gene40828:CDS	45.0%
	TTACCTTGCGACATAGTTGC+AGG	-	chr1.2:59865960-59865979	None:intergenic	45.0%
	TTTGCTGCTGAAGGGGAATT+GGG	+	chr1.2:59866356-59866375	MS.gene40828:CDS	45.0%
!	ACCAACACATTTGCTGCTGA+AGG	+	chr1.2:59866347-59866366	MS.gene40828:CDS	45.0%
!	ATTTGCTGCTGAAGGGGAAT+TGG	+	chr1.2:59866355-59866374	MS.gene40828:CDS	45.0%
!	CAACACATTTGCTGCTGAAG+GGG	+	chr1.2:59866349-59866368	MS.gene40828:CDS	45.0%
!	CAGGCTCGGTTTCAAGATTA+AGG	-	chr1.2:59865254-59865273	None:intergenic	45.0%
!	CCAACACATTTGCTGCTGAA+GGG	+	chr1.2:59866348-59866367	MS.gene40828:CDS	45.0%
!	GATGATGGTGTACGAAACTG+GGG	+	chr1.2:59865864-59865883	MS.gene40828:CDS	45.0%
!	GCTGATTGGTCATACAGACA+AGG	+	chr1.2:59865812-59865831	MS.gene40828:CDS	45.0%
!!	ACAGTTTTCGAGAATGGCAG+TGG	-	chr1.2:59865280-59865299	None:intergenic	45.0%
!!	CAAGTCCATGGTTTGCCTTT+TGG	+	chr1.2:59865567-59865586	MS.gene40828:CDS	45.0%
!!	CAGTTTTCGAGAATGGCAGT+GGG	-	chr1.2:59865279-59865298	None:intergenic	45.0%
!!	CATAGGACTTAGGAGTACCA+AGG	-	chr1.2:59865632-59865651	None:intergenic	45.0%
!!	CTGATGATGGTGTACGAAAC+TGG	+	chr1.2:59865862-59865881	MS.gene40828:CDS	45.0%
!!	GGTATAGGTACTGGTTTCTC+TGG	+	chr1.2:59866137-59866156	MS.gene40828:CDS	45.0%
!!	TGCTGGTTTAACTCTGTCTG+AGG	+	chr1.2:59865218-59865237	MS.gene40828:CDS	45.0%
!!!	GGTGTTTTTTGTCACAGGTG+TGG	+	chr1.2:59865789-59865808	MS.gene40828:CDS	45.0%
!!!	AATTTTAAATATGAAAAATT+GGG	+	chr1.2:59865768-59865787	MS.gene40828:CDS	5.0%
!!!	TAATTTTAAATATGAAAAAT+TGG	+	chr1.2:59865767-59865786	MS.gene40828:CDS	5.0%
	ACAACCACGGACCTTCATCT+AGG	-	chr1.2:59865461-59865480	None:intergenic	50.0%
	CAAAAGAGCCGTTGCTAGCA+CGG	-	chr1.2:59865740-59865759	None:intergenic	50.0%
	CCAGCAAGGTTGAGGTTTGA+AGG	-	chr1.2:59865204-59865223	None:intergenic	50.0%
	CCCAAAGTAGGTCAAGGTCT+AGG	+	chr1.2:59865600-59865619	MS.gene40828:CDS	50.0%
	CCCTTCAGCAGCAAATGTGT+TGG	-	chr1.2:59866351-59866370	None:intergenic	50.0%
	CCTTCAAACCTCAACCTTGC+TGG	+	chr1.2:59865201-59865220	MS.gene40828:CDS	50.0%
	CGACATACGCTCGCTGAAAT+AGG	-	chr1.2:59865343-59865362	None:intergenic	50.0%
	CTCCTAAGTCCTATGATGGC+CGG	+	chr1.2:59865637-59865656	MS.gene40828:CDS	50.0%
	GAGTGGCATCCACCTTATGA+TGG	-	chr1.2:59865434-59865453	None:intergenic	50.0%
	GCACTGCTGCAACAAATCGT+TGG	+	chr1.2:59865919-59865938	MS.gene40828:CDS	50.0%
	GCTCGCTGAAATAGGCAAAC+TGG	-	chr1.2:59865335-59865354	None:intergenic	50.0%
	GTGATCGTAACCCGTTTGAC+TGG	-	chr1.2:59865378-59865397	None:intergenic	50.0%
	GTGTCCGGAGCTGTATGAAT+TGG	+	chr1.2:59865836-59865855	MS.gene40828:CDS	50.0%
	TTCATCACACCCAGCATGTG+TGG	-	chr1.2:59866258-59866277	None:intergenic	50.0%
	TTCCGGCCATCATAGGACTT+AGG	-	chr1.2:59865642-59865661	None:intergenic	50.0%
!	ACCTTCATCTAGGACACGAG+TGG	-	chr1.2:59865451-59865470	None:intergenic	50.0%
!	GATTTCTGGGTGCAAGTCCA+TGG	+	chr1.2:59865555-59865574	MS.gene40828:CDS	50.0%
!	GGCCACTTTGATACGCATGT+AGG	-	chr1.2:59865679-59865698	None:intergenic	50.0%
!	TGGTTTAGGGGCACAAAGCT+CGG	-	chr1.2:59865531-59865550	None:intergenic	50.0%
	ACCTGTGGTGCTTGGCTTAC+CGG	+	chr1.2:59866223-59866242	MS.gene40828:CDS	55.0%
	AGCCTGGAAGCCAGTCAAAC+GGG	+	chr1.2:59865365-59865384	MS.gene40828:CDS	55.0%
	CAACACGTTGAGCAGCAGGT+CGG	-	chr1.2:59865899-59865918	None:intergenic	55.0%
	CACACCCAGCATGTGTGGTA+GGG	-	chr1.2:59866253-59866272	None:intergenic	55.0%
	CTGTCCCTACCACACATGCT+GGG	+	chr1.2:59866246-59866265	MS.gene40828:CDS	55.0%
	GAGCCTGGAAGCCAGTCAAA+CGG	+	chr1.2:59865364-59865383	MS.gene40828:CDS	55.0%
	GCCACTCGTGTCCTAGATGA+AGG	+	chr1.2:59865447-59865466	MS.gene40828:CDS	55.0%
	GCTGGAGGTCGAATTGCATG+TGG	-	chr1.2:59866189-59866208	None:intergenic	55.0%
	GCTTCCAATGCAACTGCTGC+AGG	+	chr1.2:59866005-59866024	MS.gene40828:CDS	55.0%
	GGAGGTCGAATTGCATGTGG+AGG	-	chr1.2:59866186-59866205	None:intergenic	55.0%
	GTAAGCCAAGCACCACAGGT+TGG	-	chr1.2:59866223-59866242	None:intergenic	55.0%
	GTGTCCTAGATGAAGGTCCG+TGG	+	chr1.2:59865454-59865473	MS.gene40828:CDS	55.0%
	TCACACCCAGCATGTGTGGT+AGG	-	chr1.2:59866254-59866273	None:intergenic	55.0%
	TCCAACCAACCTGTGGTGCT+TGG	+	chr1.2:59866215-59866234	MS.gene40828:CDS	55.0%
	TTGGTTGGACAGCAAGCTGG+AGG	-	chr1.2:59866204-59866223	None:intergenic	55.0%
!	AATGGCAGTGGGTTCAGGCT+CGG	-	chr1.2:59865268-59865287	None:intergenic	55.0%
!	AGGTTGGTTGGACAGCAAGC+TGG	-	chr1.2:59866207-59866226	None:intergenic	55.0%
!	CTTGCTGTCCAACCAACCTG+TGG	+	chr1.2:59866208-59866227	MS.gene40828:CDS	55.0%
!	GGTTTAGGGGCACAAAGCTC+GGG	-	chr1.2:59865530-59865549	None:intergenic	55.0%
!	TCGAGAATGGCAGTGGGTTC+AGG	-	chr1.2:59865273-59865292	None:intergenic	55.0%
!	TGTCACAGGTGTGGGCTGAT+TGG	+	chr1.2:59865798-59865817	MS.gene40828:CDS	55.0%
!!	AACCCGTTTGACTGGCTTCC+AGG	-	chr1.2:59865370-59865389	None:intergenic	55.0%
	ACAAAGCTCGGGACGACGTC+GGG	-	chr1.2:59865519-59865538	None:intergenic	60.0%
	CACAAAGCTCGGGACGACGT+CGG	-	chr1.2:59865520-59865539	None:intergenic	60.0%
	CGACCTGCTGCTCAACGTGT+TGG	+	chr1.2:59865897-59865916	MS.gene40828:CDS	60.0%
	GCATGTGTGGTAGGGACAGC+CGG	-	chr1.2:59866245-59866264	None:intergenic	60.0%
	GCTGTCCCTACCACACATGC+TGG	+	chr1.2:59866245-59866264	MS.gene40828:CDS	60.0%
	GGCACCTGCAGCAGTTGCAT+TGG	-	chr1.2:59866012-59866031	None:intergenic	60.0%
	GTGCCAACACGTTGAGCAGC+AGG	-	chr1.2:59865903-59865922	None:intergenic	60.0%
	TGGCGTGTCCGTGCTAGCAA+CGG	+	chr1.2:59865729-59865748	MS.gene40828:CDS	60.0%
!!	GCCAAGCACCACAGGTTGGT+TGG	-	chr1.2:59866219-59866238	None:intergenic	60.0%
	CAAAGCTCGGGACGACGTCG+GGG	-	chr1.2:59865518-59865537	None:intergenic	65.0%
	CACGTTGAGCAGCAGGTCGG+AGG	-	chr1.2:59865896-59865915	None:intergenic	65.0%
	GCCGGTAAGCCAAGCACCAC+AGG	-	chr1.2:59866227-59866246	None:intergenic	65.0%
	GCGAGCGTATGTCGCGAGCC+TGG	+	chr1.2:59865349-59865368	MS.gene40828:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	59865195	59866421	59865195	ID=MS.gene40828
chr1.2	mRNA	59865195	59866421	59865195	ID=MS.gene40828.t1;Parent=MS.gene40828
chr1.2	exon	59865195	59866421	59865195	ID=MS.gene40828.t1.exon1;Parent=MS.gene40828.t1
chr1.2	CDS	59865195	59866421	59865195	ID=cds.MS.gene40828.t1;Parent=MS.gene40828.t1

Gene Sequence

>MS.gene40828

ATGGATCCTTCAAACCTCAACCTTGCTGGTTTAACTCTGTCTGAGGAGGGTCTAACCCTTAATCTTGAAACCGAGCCTGAACCCACTGCCATTCTCGAAAACTGTTTGATTGGTCGTGTTCTCGCTGATCGTGAAATCCAGTTTGCCTATTTCAGCGAGCGTATGTCGCGAGCCTGGAAGCCAGTCAAACGGGTTACGATCACGAAATCTGTTGCAGATCGTTTCTTGTTTCAGTTCCATCATAAGGTGGATGCCACTCGTGTCCTAGATGAAGGTCCGTGGTTGTATGATAACTTTCATATAGCACTGGATCGTATTAACCCCGACGTCGTCCCGAGCTTTGTGCCCCTAAACCATATCGATTTCTGGGTGCAAGTCCATGGTTTGCCTTTTGGATTCATTCAACCCAAAGTAGGTCAAGGTCTAGGAAGTTTCCTTGGTACTCCTAAGTCCTATGATGGCCGGAACACAATTCATAGTGCCTACATGCGTATCAAAGTGGCCGCTGATGTTACTGTGCCGTTAAAAAAAGAATGGCGTGTCCGTGCTAGCAACGGCTCTTTTGTGACTGTTAATTTTAAATATGAAAAATTGGGTGTTTTTTGTCACAGGTGTGGGCTGATTGGTCATACAGACAAGGTGTGTCCGGAGCTGTATGAATTGGACTCTGATGATGGTGTACGAAACTGGGGAGTTTACCTCCGACCTGCTGCTCAACGTGTTGGCACTGCTGCAACAAATCGTTGGCTTCAAGACCCTATTCCTGCAACTATGTCGCAAGGTAACAATACTGCTAGTGGTGGATTCGATGCTTCCAATGCAACTGCTGCAGGTGCCGCTGCTGTGCCAAATTTCAATGACAGGATGCTTGCTGTCCAAACTCAAATAACTGCAATCAAGCATGACATGCTCGCTGTCCAGACCACTGCAAAAATGAAACAAGGTATAGGTACTGGTTTCTCTGGTAAACTGCATTATCTGCCTTCTTCCTCCACATGCAATTCGACCTCCAGCTTGCTGTCCAACCAACCTGTGGTGCTTGGCTTACCGGCTGTCCCTACCACACATGCTGGGTGTGATGAATCTCATGATGATACCGATACTGGTTCTGAATTGAAGAAAAGGAAACGGATGTTGAACCTTCAGAATGCTACCAACACATTTGCTGCTGAAGGGGAATTGGGAAACAATGTAATAGGCATTGATGTTAGTATTGGGGGGATGTAG

Protein sequence

>MS.gene40828.t1

MDPSNLNLAGLTLSEEGLTLNLETEPEPTAILENCLIGRVLADREIQFAYFSERMSRAWKPVKRVTITKSVADRFLFQFHHKVDATRVLDEGPWLYDNFHIALDRINPDVVPSFVPLNHIDFWVQVHGLPFGFIQPKVGQGLGSFLGTPKSYDGRNTIHSAYMRIKVAADVTVPLKKEWRVRASNGSFVTVNFKYEKLGVFCHRCGLIGHTDKVCPELYELDSDDGVRNWGVYLRPAAQRVGTAATNRWLQDPIPATMSQGNNTASGGFDASNATAAGAAAVPNFNDRMLAVQTQITAIKHDMLAVQTTAKMKQGIGTGFSGKLHYLPSSSTCNSTSSLLSNQPVVLGLPAVPTTHAGCDESHDDTDTGSELKKRKRMLNLQNATNTFAAEGELGNNVIGIDVSIGGM