Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035626.t1 | XP_024642377.1 | 83.5 | 395 | 65 | 0 | 10 | 404 | 1 | 395 | 8.30E-173 | 617.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035626.t1 | A0A2K3PIT6 | 41.4 | 676 | 260 | 11 | 1 | 546 | 88 | 757 | 2.8e-130 | 475.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035626.t1 | MTR_0010s0370 | 30.519 | 154 | 106 | 1 | 24 | 176 | 24 | 177 | 1.16e-24 | 101 |
| MS.gene035626.t1 | MTR_0010s0350 | 30.519 | 154 | 106 | 1 | 24 | 176 | 24 | 177 | 1.16e-24 | 101 |
| MS.gene035626.t1 | MTR_0008s0210 | 29.801 | 151 | 62 | 4 | 47 | 188 | 5 | 120 | 3.43e-14 | 70.9 |
| MS.gene035626.t1 | MTR_6g045237 | 27.717 | 184 | 130 | 2 | 31 | 213 | 83 | 264 | 1.18e-13 | 73.9 |
| MS.gene035626.t1 | MTR_6g033215 | 23.429 | 175 | 132 | 2 | 24 | 196 | 119 | 293 | 2.01e-13 | 71.6 |
| MS.gene035626.t1 | MTR_3g436680 | 36.000 | 100 | 63 | 1 | 429 | 527 | 1 | 100 | 5.60e-13 | 72.0 |
| MS.gene035626.t1 | MTR_2g061500 | 29.661 | 118 | 82 | 1 | 10 | 127 | 13 | 129 | 1.02e-12 | 66.2 |
| MS.gene035626.t1 | MTR_7g106180 | 25.301 | 166 | 123 | 1 | 10 | 174 | 1 | 166 | 1.10e-12 | 68.2 |
| MS.gene035626.t1 | MTR_0008s0180 | 31.356 | 118 | 44 | 3 | 73 | 188 | 19 | 101 | 2.82e-12 | 64.7 |
| MS.gene035626.t1 | MTR_4g103530 | 32.653 | 98 | 62 | 1 | 53 | 150 | 1 | 94 | 4.09e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035626.t1 | AT2G01050 | 27.317 | 205 | 131 | 6 | 20 | 213 | 59 | 256 | 7.90e-15 | 77.8 |
| MS.gene035626.t1 | AT5G36228 | 28.497 | 193 | 128 | 4 | 33 | 220 | 38 | 225 | 1.86e-12 | 69.3 |
Find 161 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTTGATTTGGGCTTTAA+TGG | 0.128453 | 8.1:-3094184 | MS.gene035626:CDS |
| CTGATTCTTGATACGATTTC+AGG | 0.136917 | 8.1:-3095656 | MS.gene035626:CDS |
| TTCCCTTTATCTTGGGCTTT+TGG | 0.188445 | 8.1:+3094885 | None:intergenic |
| CTTCTTTCTTCCCTTTATCT+TGG | 0.219562 | 8.1:+3094877 | None:intergenic |
| ATAAATCATTTGTCAAGATT+TGG | 0.258293 | 8.1:-3094052 | MS.gene035626:CDS |
| AGATTGCAATCTTCTTGATT+TGG | 0.266572 | 8.1:-3094194 | MS.gene035626:CDS |
| GATTGCAATCTTCTTGATTT+GGG | 0.271400 | 8.1:-3094193 | MS.gene035626:CDS |
| CAAGCTGAGGTCTGATTTAA+TGG | 0.276798 | 8.1:-3095564 | MS.gene035626:CDS |
| GTTGGGTTCCTTCTTGAATT+CGG | 0.282064 | 8.1:+3095208 | None:intergenic |
| CCCATTCTGTTGTTGTCCCT+TGG | 0.285892 | 8.1:+3095497 | None:intergenic |
| ATTTACACACTGTTCAGTTC+TGG | 0.295335 | 8.1:-3095610 | MS.gene035626:CDS |
| AGAAAGGGTCGCGCGGTTAA+TGG | 0.300622 | 8.1:-3095942 | MS.gene035626:CDS |
| CTGCCATTTGACCATGTAAA+AGG | 0.303905 | 8.1:+3094157 | None:intergenic |
| TTCTTTCTTCCCTTTATCTT+GGG | 0.314050 | 8.1:+3094878 | None:intergenic |
| TTGGGTTCCTTCTTGAATTC+GGG | 0.323018 | 8.1:+3095209 | None:intergenic |
| TAAATCATTTGTCAAGATTT+GGG | 0.325183 | 8.1:-3094051 | MS.gene035626:CDS |
| AAGCCAAAAGCCCAAGATAA+AGG | 0.331158 | 8.1:-3094888 | MS.gene035626:CDS |
| AAGATCAAGCCTATGGTTCT+TGG | 0.356846 | 8.1:-3095262 | MS.gene035626:CDS |
| GACAAATGATTTATCTCAAT+GGG | 0.360248 | 8.1:+3094061 | None:intergenic |
| TGTCCCTTGGATTCACTTCA+AGG | 0.368422 | 8.1:+3095510 | None:intergenic |
| TATTGAGCTGGATGTGTGTT+TGG | 0.371142 | 8.1:-3094008 | MS.gene035626:CDS |
| TTGAATTCGGGCTGAACCTT+TGG | 0.373224 | 8.1:+3095221 | None:intergenic |
| AGCTGGTGCGAAGGATAAAA+AGG | 0.374494 | 8.1:-3094964 | MS.gene035626:CDS |
| AAAGAGACATCTTGTAGATA+TGG | 0.381525 | 8.1:-3094784 | MS.gene035626:CDS |
| GCCACATAGTCTCCTCTGTT+TGG | 0.385591 | 8.1:+3093696 | None:intergenic |
| TTTACACACTGTTCAGTTCT+GGG | 0.386077 | 8.1:-3095609 | MS.gene035626:CDS |
| AAAACATGTTGCATTATTCC+AGG | 0.395090 | 8.1:+3093898 | None:intergenic |
| ATTACAGAGGGTGAAGCTTT+CGG | 0.403093 | 8.1:-3095881 | MS.gene035626:CDS |
| CCCACATTTGTAGCAGAAGT+TGG | 0.403486 | 8.1:+3095361 | None:intergenic |
| ACTCTTTAAACTCAGAATCA+AGG | 0.421337 | 8.1:+3093849 | None:intergenic |
| GGTCTATCGCCACTTTGATT+CGG | 0.423310 | 8.1:+3095465 | None:intergenic |
| TGCGTGAGGAAAACTTGAAC+AGG | 0.424273 | 8.1:+3095732 | None:intergenic |
| TGCTGCTATTTCTATTGAGC+TGG | 0.424722 | 8.1:-3094020 | MS.gene035626:CDS |
| GTCTCTGCTTCGATAACATC+TGG | 0.430084 | 8.1:+3095101 | None:intergenic |
| AGCCAAAAGCCCAAGATAAA+GGG | 0.433479 | 8.1:-3094887 | MS.gene035626:CDS |
| CTCGCTTCAACGGGTTCCTC+AGG | 0.436276 | 8.1:+3095444 | None:intergenic |
| TGACAAATGATTTATCTCAA+TGG | 0.437513 | 8.1:+3094060 | None:intergenic |
| CTTCACATTCCTTCATCTGA+TGG | 0.438724 | 8.1:+3095330 | None:intergenic |
| TGCTACAAATGTGGGAGGAT+TGG | 0.442103 | 8.1:-3095353 | MS.gene035626:CDS |
| CCAAGGGACAACAACAGAAT+GGG | 0.443301 | 8.1:-3095497 | MS.gene035626:CDS |
| TCGGGCTGAACCTTTGGTAA+TGG | 0.444753 | 8.1:+3095227 | None:intergenic |
| AATTCAATGTAGATTGGATC+GGG | 0.449470 | 8.1:-3094119 | MS.gene035626:CDS |
| GGAAGAAAGAAGGTGGGAAG+AGG | 0.450579 | 8.1:-3094866 | MS.gene035626:CDS |
| GCACAGTACCTCGCTTCAAC+GGG | 0.451802 | 8.1:+3095435 | None:intergenic |
| TTAAAAGCTCTCACATTGTA+TGG | 0.453048 | 8.1:+3095824 | None:intergenic |
| TGATAGTGTTGTGGAGGTGA+TGG | 0.453288 | 8.1:-3094820 | MS.gene035626:CDS |
| CAAAATGTTGTGCTGGATGC+GGG | 0.456275 | 8.1:-3095062 | MS.gene035626:CDS |
| AGATGTGAAGCAATGGTTAG+AGG | 0.456366 | 8.1:-3093923 | MS.gene035626:CDS |
| GCTTTCGGTCGCACACTAGT+AGG | 0.457940 | 8.1:-3095866 | MS.gene035626:CDS |
| CGGGCAACGTGGCTGAAGGA+AGG | 0.462908 | 8.1:-3093662 | MS.gene035626:CDS |
| TCAAGTAAGTGTTCCGAAGC+AGG | 0.465463 | 8.1:-3095146 | MS.gene035626:CDS |
| AGGAGACTATGTGGCGGCAG+AGG | 0.466468 | 8.1:-3093688 | MS.gene035626:CDS |
| TTACTGCACGTACCTGTGTT+GGG | 0.472852 | 8.1:+3095191 | None:intergenic |
| TATTCTTCAGCCTCCAAGCT+TGG | 0.473869 | 8.1:+3095789 | None:intergenic |
| TGGCAGAATTCAATGTAGAT+TGG | 0.476678 | 8.1:-3094125 | MS.gene035626:CDS |
| TACATGGTCAAATGGCAGAC+AGG | 0.478579 | 8.1:-3094152 | MS.gene035626:CDS |
| TATGTGGCGGCAGAGGAGTC+GGG | 0.485907 | 8.1:-3093681 | MS.gene035626:CDS |
| CGCGCGGTTAATGGAGGAAG+AGG | 0.488790 | 8.1:-3095933 | MS.gene035626:CDS |
| CTTACTGCACGTACCTGTGT+TGG | 0.489768 | 8.1:+3095190 | None:intergenic |
| AGCACAGTACCTCGCTTCAA+CGG | 0.489899 | 8.1:+3095434 | None:intergenic |
| AGCTCCACGGACCTGATTGA+AGG | 0.490618 | 8.1:+3095693 | None:intergenic |
| CTATGTGGCGGCAGAGGAGT+CGG | 0.491237 | 8.1:-3093682 | MS.gene035626:CDS |
| TATCGCCACTTTGATTCGGA+TGG | 0.492017 | 8.1:+3095469 | None:intergenic |
| TAAATCAGACCTCAGCTTGA+GGG | 0.493910 | 8.1:+3095568 | None:intergenic |
| GGGCAACGTGGCTGAAGGAA+GGG | 0.495225 | 8.1:-3093661 | MS.gene035626:CDS |
| AAGCAATGGTTAGAGGCTCC+TGG | 0.496780 | 8.1:-3093916 | MS.gene035626:CDS |
| GCTGAAAACATCCTTCAATC+AGG | 0.497200 | 8.1:-3095704 | MS.gene035626:CDS |
| CTCTTTAAACTCAGAATCAA+GGG | 0.499525 | 8.1:+3093850 | None:intergenic |
| AGCAGACAATGATCCAAGCT+TGG | 0.503615 | 8.1:-3095802 | MS.gene035626:CDS |
| CCACATTTGTAGCAGAAGTT+GGG | 0.504415 | 8.1:+3095362 | None:intergenic |
| GTTCCGGTTTGAAAAGTGTT+GGG | 0.504876 | 8.1:-3093957 | MS.gene035626:CDS |
| GCACACTAGTAGGAAAGATC+TGG | 0.509619 | 8.1:-3095856 | MS.gene035626:CDS |
| CTTCTGATGAATTTATCAAA+CGG | 0.511855 | 8.1:-3094090 | MS.gene035626:CDS |
| AATTCCAGAAAAGAAACCTA+TGG | 0.511930 | 8.1:-3095409 | MS.gene035626:CDS |
| CCCAACTTCTGCTACAAATG+TGG | 0.513168 | 8.1:-3095362 | MS.gene035626:CDS |
| TGAGCTGGATGTGTGTTTGG+AGG | 0.520679 | 8.1:-3094005 | MS.gene035626:CDS |
| TCCAAGGGACAACAACAGAA+TGG | 0.524846 | 8.1:-3095498 | MS.gene035626:CDS |
| CGTACTTGAAGAAAATCCAT+AGG | 0.526483 | 8.1:+3095393 | None:intergenic |
| CTCAGAATCAAGGGATTGCA+TGG | 0.527382 | 8.1:+3093859 | None:intergenic |
| GTGTGTAAATCCAGCTCTGA+AGG | 0.534879 | 8.1:+3095623 | None:intergenic |
| GAATTCAATGTAGATTGGAT+CGG | 0.537470 | 8.1:-3094120 | MS.gene035626:CDS |
| AAAGAAGTGGAGTCGCCAAA+AGG | 0.538026 | 8.1:-3094925 | MS.gene035626:CDS |
| GAAGGTGTGGCTGAAACTCT+AGG | 0.540174 | 8.1:-3095014 | MS.gene035626:CDS |
| TTATCTCAAAAGTCTGCAGC+TGG | 0.541066 | 8.1:-3094981 | MS.gene035626:CDS |
| GAAACAAGCAAGGCTATTGA+AGG | 0.541878 | 8.1:-3095032 | MS.gene035626:CDS |
| GGCAACGTGGCTGAAGGAAG+GGG | 0.543605 | 8.1:-3093660 | MS.gene035626:CDS |
| TGTTCCGGTTTGAAAAGTGT+TGG | 0.544254 | 8.1:-3093958 | MS.gene035626:CDS |
| TGATGAGCAACCTTCAGAGC+TGG | 0.544943 | 8.1:-3095633 | MS.gene035626:CDS |
| AATTCCTTGAAGTGAATCCA+AGG | 0.547581 | 8.1:-3095514 | MS.gene035626:CDS |
| CAAGATAAAGGGAAGAAAGA+AGG | 0.550576 | 8.1:-3094876 | MS.gene035626:CDS |
| ACACTTACTTGAACTAGTTG+AGG | 0.558621 | 8.1:+3095157 | None:intergenic |
| TTCCACCGCATTTCTACTCA+AGG | 0.558648 | 8.1:+3094216 | None:intergenic |
| ACAAAATGTTGTGCTGGATG+CGG | 0.561987 | 8.1:-3095063 | MS.gene035626:CDS |
| GGGTGAAGGAATCACGGTGG+AGG | 0.563521 | 8.1:-3095912 | MS.gene035626:CDS |
| GATAGTGTTGTGGAGGTGAT+GGG | 0.564399 | 8.1:-3094819 | MS.gene035626:CDS |
| AAACTAAGATGAGAAAGAAG+TGG | 0.565569 | 8.1:-3094938 | MS.gene035626:CDS |
| TATCAAGAATCAGCAAGTTA+CGG | 0.566247 | 8.1:+3095666 | None:intergenic |
| TTAAATCAGACCTCAGCTTG+AGG | 0.566841 | 8.1:+3095567 | None:intergenic |
| ATAAAGGGAAGAAAGAAGGT+GGG | 0.567424 | 8.1:-3094872 | MS.gene035626:CDS |
| GAAGAACAAGATCAAGCCTA+TGG | 0.569925 | 8.1:-3095269 | MS.gene035626:CDS |
| GAGGATTGGCCATCAGATGA+AGG | 0.574039 | 8.1:-3095339 | MS.gene035626:CDS |
| GAGTCGGGCAACGTGGCTGA+AGG | 0.574444 | 8.1:-3093666 | MS.gene035626:CDS |
| TAAGTGTTCCGAAGCAGGAG+AGG | 0.576279 | 8.1:-3095141 | MS.gene035626:CDS |
| CCAACTTCTGCTACAAATGT+GGG | 0.579749 | 8.1:-3095361 | MS.gene035626:CDS |
| AGCTTGGAGGCTGAAGAATA+CGG | 0.580519 | 8.1:-3095786 | MS.gene035626:CDS |
| TAGTGAAGGGTATACAGATG+TGG | 0.580534 | 8.1:-3095291 | MS.gene035626:CDS |
| GAAACGAGACAAGATAGTGA+AGG | 0.581769 | 8.1:-3095305 | MS.gene035626:CDS |
| AGACAATGATCCAAGCTTGG+AGG | 0.586424 | 8.1:-3095799 | MS.gene035626:CDS |
| GGAAGAGGGTGAAGGAATCA+CGG | 0.588947 | 8.1:-3095918 | MS.gene035626:CDS |
| AAGGGTCGCGCGGTTAATGG+AGG | 0.589860 | 8.1:-3095939 | MS.gene035626:CDS |
| AAGAAGTGGAGTCGCCAAAA+GGG | 0.591046 | 8.1:-3094924 | MS.gene035626:CDS |
| ACATGGTCAAATGGCAGACA+GGG | 0.593981 | 8.1:-3094151 | MS.gene035626:CDS |
| TCAAATGGCAGACAGGGAAG+TGG | 0.594102 | 8.1:-3094145 | MS.gene035626:CDS |
| ATGATCTTCCCCTCAAGCTG+AGG | 0.594999 | 8.1:-3095577 | MS.gene035626:CDS |
| AAGCAAGGCTATTGAAGGTG+TGG | 0.596317 | 8.1:-3095027 | MS.gene035626:CDS |
| GTCCTTGAGTAGAAATGCGG+TGG | 0.597041 | 8.1:-3094218 | MS.gene035626:CDS |
| AAAGTCTGCAGCTGGTGCGA+AGG | 0.597211 | 8.1:-3094973 | MS.gene035626:CDS |
| CGAAGCAGAGACCCCTGTGG+TGG | 0.601397 | 8.1:-3095090 | MS.gene035626:CDS |
| GAGAGCTTCTCCATTACCAA+AGG | 0.602049 | 8.1:-3095237 | MS.gene035626:CDS |
| AAATCAGACCTCAGCTTGAG+GGG | 0.602071 | 8.1:+3095569 | None:intergenic |
| AGCTCTCATCCAAGAACCAT+AGG | 0.602121 | 8.1:+3095253 | None:intergenic |
| TGTGGCTGAAACTCTAGGCT+CGG | 0.605607 | 8.1:-3095009 | MS.gene035626:CDS |
| GGTTCAGCCCGAATTCAAGA+AGG | 0.606975 | 8.1:-3095216 | MS.gene035626:CDS |
| GATAAAGGGAAGAAAGAAGG+TGG | 0.611984 | 8.1:-3094873 | MS.gene035626:CDS |
| CAAATGATTTATCTCAATGG+GGG | 0.615382 | 8.1:+3094063 | None:intergenic |
| TTCAAGAAGGAACCCAACAC+AGG | 0.616610 | 8.1:-3095203 | MS.gene035626:CDS |
| AAACGAGACAAGATAGTGAA+GGG | 0.618430 | 8.1:-3095304 | MS.gene035626:CDS |
| TCAGATGAAGGAATGTGAAG+AGG | 0.619400 | 8.1:-3095327 | MS.gene035626:CDS |
| ACATCCTTCAATCAGGTCCG+TGG | 0.620661 | 8.1:-3095697 | MS.gene035626:CDS |
| GAGGAAGATGTCATTACAGA+GGG | 0.627066 | 8.1:-3095893 | MS.gene035626:CDS |
| ATTGATATCAATAAACCAGA+GGG | 0.635170 | 8.1:-3094759 | MS.gene035626:CDS |
| AGTGTTGTGGAGGTGATGGG+TGG | 0.635186 | 8.1:-3094816 | MS.gene035626:CDS |
| ACAAATGATTTATCTCAATG+GGG | 0.636596 | 8.1:+3094062 | None:intergenic |
| TTCAGAGCTGCTCCAAACAG+AGG | 0.637110 | 8.1:-3093708 | MS.gene035626:intron |
| AAGTTACGGTCGAAGCTCCA+CGG | 0.640050 | 8.1:+3095680 | None:intergenic |
| ATTCCTTGAAGTGAATCCAA+GGG | 0.641062 | 8.1:-3095513 | MS.gene035626:CDS |
| TCCAAACAGAGGAGACTATG+TGG | 0.645176 | 8.1:-3093697 | MS.gene035626:CDS |
| TGATATCAATAAACCAGAGG+GGG | 0.649295 | 8.1:-3094757 | MS.gene035626:intron |
| TTAATGGAGGAAGAGGGTGA+AGG | 0.650501 | 8.1:-3095926 | MS.gene035626:CDS |
| TCTCACATTGTATGGAACAT+CGG | 0.655611 | 8.1:+3095832 | None:intergenic |
| GAAATCCATCCGAATCAAAG+TGG | 0.657517 | 8.1:-3095474 | MS.gene035626:CDS |
| CAAGGGACAACAACAGAATG+GGG | 0.659903 | 8.1:-3095496 | MS.gene035626:CDS |
| CTGAGGAACCCGTTGAAGCG+AGG | 0.663212 | 8.1:-3095443 | MS.gene035626:CDS |
| GGCAGAGGAGTCGGGCAACG+TGG | 0.665271 | 8.1:-3093673 | MS.gene035626:CDS |
| GCGCGGTTAATGGAGGAAGA+GGG | 0.670860 | 8.1:-3095932 | MS.gene035626:CDS |
| TCAAATGAAGAGAAGGCTGG+TGG | 0.671314 | 8.1:-3094265 | MS.gene035626:intron |
| GGGGTCTGAAGAAACAAGCA+AGG | 0.681289 | 8.1:-3095042 | MS.gene035626:CDS |
| TAATGTCACTGATAGTGTTG+TGG | 0.682681 | 8.1:-3094829 | MS.gene035626:CDS |
| TGTCACTGATAGTGTTGTGG+AGG | 0.684951 | 8.1:-3094826 | MS.gene035626:CDS |
| TGATGACAGATGTGAAGCAA+TGG | 0.685826 | 8.1:-3093930 | MS.gene035626:CDS |
| GGAGGAAGATGTCATTACAG+AGG | 0.687356 | 8.1:-3095894 | MS.gene035626:CDS |
| GATTGATATCAATAAACCAG+AGG | 0.688349 | 8.1:-3094760 | MS.gene035626:CDS |
| TCAAAGTGGCGATAGACCTG+AGG | 0.691132 | 8.1:-3095460 | MS.gene035626:CDS |
| AAAATGTTGTGCTGGATGCG+GGG | 0.696546 | 8.1:-3095061 | MS.gene035626:CDS |
| ACTTCTGCTACAAATGTGGG+AGG | 0.700416 | 8.1:-3095358 | MS.gene035626:CDS |
| GCTGTCCTTGAGTAGAAATG+CGG | 0.709983 | 8.1:-3094221 | MS.gene035626:CDS |
| TGGACAAAGAAAGGGTCGCG+CGG | 0.740272 | 8.1:-3095949 | MS.gene035626:CDS |
| TTGATATCAATAAACCAGAG+GGG | 0.742860 | 8.1:-3094758 | MS.gene035626:CDS |
| AAACAGAGGAGACTATGTGG+CGG | 0.745489 | 8.1:-3093694 | MS.gene035626:CDS |
| AGAGGGTGAAGGAATCACGG+TGG | 0.776422 | 8.1:-3095915 | MS.gene035626:CDS |
| TATCGAAGCAGAGACCCCTG+TGG | 0.779443 | 8.1:-3095093 | MS.gene035626:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATCATTTGTCAAGATT+TGG | - | chr8.1:3095554-3095573 | MS.gene035626:CDS | 20.0% |
| !! | TAAATCATTTGTCAAGATTT+GGG | - | chr8.1:3095555-3095574 | MS.gene035626:CDS | 20.0% |
| !!! | TTCTTTTTATTTGTTTCATC+CGG | + | chr8.1:3095242-3095261 | None:intergenic | 20.0% |
| ! | ACAAATGATTTATCTCAATG+GGG | + | chr8.1:3095547-3095566 | None:intergenic | 25.0% |
| ! | ATTGATATCAATAAACCAGA+GGG | - | chr8.1:3094847-3094866 | MS.gene035626:CDS | 25.0% |
| ! | CTTCTGATGAATTTATCAAA+CGG | - | chr8.1:3095516-3095535 | MS.gene035626:CDS | 25.0% |
| ! | GACAAATGATTTATCTCAAT+GGG | + | chr8.1:3095548-3095567 | None:intergenic | 25.0% |
| ! | GATTTAATGGCGAAAAAAAT+TGG | - | chr8.1:3094055-3094074 | MS.gene035626:CDS | 25.0% |
| ! | TACTCTCTAAACCATATTAT+GGG | - | chr8.1:3095158-3095177 | MS.gene035626:CDS | 25.0% |
| ! | TGACAAATGATTTATCTCAA+TGG | + | chr8.1:3095549-3095568 | None:intergenic | 25.0% |
| ! | TTACTCTCTAAACCATATTA+TGG | - | chr8.1:3095157-3095176 | MS.gene035626:CDS | 25.0% |
| !! | TTAATGGTTATCCTTTTACA+TGG | - | chr8.1:3095438-3095457 | MS.gene035626:CDS | 25.0% |
| !!! | TCTTTTTATTTGTTTCATCC+GGG | + | chr8.1:3095241-3095260 | None:intergenic | 25.0% |
| AAAAAAATTGGAGATCTGGT+AGG | - | chr8.1:3094067-3094086 | MS.gene035626:CDS | 30.0% | |
| AAAACATGTTGCATTATTCC+AGG | + | chr8.1:3095711-3095730 | None:intergenic | 30.0% | |
| AAACTAAGATGAGAAAGAAG+TGG | - | chr8.1:3094668-3094687 | MS.gene035626:intron | 30.0% | |
| AAAGAGACATCTTGTAGATA+TGG | - | chr8.1:3094822-3094841 | MS.gene035626:CDS | 30.0% | |
| AATTCAATGTAGATTGGATC+GGG | - | chr8.1:3095487-3095506 | MS.gene035626:CDS | 30.0% | |
| AATTCCAGAAAAGAAACCTA+TGG | - | chr8.1:3094197-3094216 | MS.gene035626:CDS | 30.0% | |
| ACTCTCTAAACCATATTATG+GGG | - | chr8.1:3095159-3095178 | MS.gene035626:CDS | 30.0% | |
| ACTCTTTAAACTCAGAATCA+AGG | + | chr8.1:3095760-3095779 | None:intergenic | 30.0% | |
| AGATTGCAATCTTCTTGATT+TGG | - | chr8.1:3095412-3095431 | MS.gene035626:CDS | 30.0% | |
| ATGTAGAAAGTGGCAAAAAT+TGG | - | chr8.1:3095192-3095211 | MS.gene035626:CDS | 30.0% | |
| CAAATGATTTATCTCAATGG+GGG | + | chr8.1:3095546-3095565 | None:intergenic | 30.0% | |
| CTCTTTAAACTCAGAATCAA+GGG | + | chr8.1:3095759-3095778 | None:intergenic | 30.0% | |
| GAATTCAATGTAGATTGGAT+CGG | - | chr8.1:3095486-3095505 | MS.gene035626:CDS | 30.0% | |
| GATTGATATCAATAAACCAG+AGG | - | chr8.1:3094846-3094865 | MS.gene035626:CDS | 30.0% | |
| GATTGCAATCTTCTTGATTT+GGG | - | chr8.1:3095413-3095432 | MS.gene035626:CDS | 30.0% | |
| TAGGTTAAAGTCTGATGAAA+TGG | - | chr8.1:3095010-3095029 | MS.gene035626:CDS | 30.0% | |
| TATCAAGAATCAGCAAGTTA+CGG | + | chr8.1:3093943-3093962 | None:intergenic | 30.0% | |
| TATCCTTTCAAATGAAGAGA+AGG | - | chr8.1:3095334-3095353 | MS.gene035626:CDS | 30.0% | |
| TCCAACTTAAGAGTTTCATT+GGG | + | chr8.1:3094899-3094918 | None:intergenic | 30.0% | |
| TTAAAAGCTCTCACATTGTA+TGG | + | chr8.1:3093785-3093804 | None:intergenic | 30.0% | |
| TTCCAACTTAAGAGTTTCAT+TGG | + | chr8.1:3094900-3094919 | None:intergenic | 30.0% | |
| TTCTTTCTTCCCTTTATCTT+GGG | + | chr8.1:3094731-3094750 | None:intergenic | 30.0% | |
| TTGATATCAATAAACCAGAG+GGG | - | chr8.1:3094848-3094867 | MS.gene035626:CDS | 30.0% | |
| ! | AAATCCATAGGTTTCTTTTC+TGG | + | chr8.1:3094204-3094223 | None:intergenic | 30.0% |
| ! | AAGAACATCTGAAATCAGAA+AGG | - | chr8.1:3095781-3095800 | MS.gene035626:CDS | 30.0% |
| ! | TATCCTTTTACATGGTCAAA+TGG | - | chr8.1:3095446-3095465 | MS.gene035626:CDS | 30.0% |
| ! | TGGAGTATTACTGGAATTTA+CGG | - | chr8.1:3095212-3095231 | MS.gene035626:CDS | 30.0% |
| ! | TGGTTTTCTTAATGGAAACT+AGG | - | chr8.1:3094991-3095010 | MS.gene035626:CDS | 30.0% |
| !!! | GCTTTTGGCTTTTGAATTTT+GGG | + | chr8.1:3094709-3094728 | None:intergenic | 30.0% |
| AAACGAGACAAGATAGTGAA+GGG | - | chr8.1:3094302-3094321 | MS.gene035626:intron | 35.0% | |
| AATTCCTTGAAGTGAATCCA+AGG | - | chr8.1:3094092-3094111 | MS.gene035626:CDS | 35.0% | |
| ACACTTACTTGAACTAGTTG+AGG | + | chr8.1:3094452-3094471 | None:intergenic | 35.0% | |
| AGGATTGAAGATGTAGAAAG+TGG | - | chr8.1:3095182-3095201 | MS.gene035626:CDS | 35.0% | |
| ATAAAGGGAAGAAAGAAGGT+GGG | - | chr8.1:3094734-3094753 | MS.gene035626:intron | 35.0% | |
| ATCAATTGTGGATTCTCTTC+TGG | - | chr8.1:3095044-3095063 | MS.gene035626:CDS | 35.0% | |
| ATTCCTTGAAGTGAATCCAA+GGG | - | chr8.1:3094093-3094112 | MS.gene035626:CDS | 35.0% | |
| ATTTACACACTGTTCAGTTC+TGG | - | chr8.1:3093996-3094015 | MS.gene035626:CDS | 35.0% | |
| CAAGATAAAGGGAAGAAAGA+AGG | - | chr8.1:3094730-3094749 | MS.gene035626:intron | 35.0% | |
| CATTACAAAGTTCAGAGAGT+TGG | - | chr8.1:3095865-3095884 | MS.gene035626:CDS | 35.0% | |
| CCAACTTAAGAGTTTCATTG+GGG | + | chr8.1:3094898-3094917 | None:intergenic | 35.0% | |
| CGTACTTGAAGAAAATCCAT+AGG | + | chr8.1:3094216-3094235 | None:intergenic | 35.0% | |
| CTGATTCTTGATACGATTTC+AGG | - | chr8.1:3093950-3093969 | MS.gene035626:CDS | 35.0% | |
| CTTCTTTCTTCCCTTTATCT+TGG | + | chr8.1:3094732-3094751 | None:intergenic | 35.0% | |
| GAGAGTAAGACATAATTGAC+AGG | + | chr8.1:3095145-3095164 | None:intergenic | 35.0% | |
| GGAAAAACAAAATGTTGTGC+TGG | - | chr8.1:3094537-3094556 | MS.gene035626:intron | 35.0% | |
| TCAATTGTGGATTCTCTTCT+GGG | - | chr8.1:3095045-3095064 | MS.gene035626:CDS | 35.0% | |
| TCCATTAAGAAAACCACTTG+AGG | + | chr8.1:3094987-3095006 | None:intergenic | 35.0% | |
| TCTCACATTGTATGGAACAT+CGG | + | chr8.1:3093777-3093796 | None:intergenic | 35.0% | |
| TGATATCAATAAACCAGAGG+GGG | - | chr8.1:3094849-3094868 | MS.gene035626:CDS | 35.0% | |
| TGGCAGAATTCAATGTAGAT+TGG | - | chr8.1:3095481-3095500 | MS.gene035626:CDS | 35.0% | |
| TTTACACACTGTTCAGTTCT+GGG | - | chr8.1:3093997-3094016 | MS.gene035626:CDS | 35.0% | |
| ! | AGAAAACCACTTGAGGATTT+TGG | + | chr8.1:3094980-3094999 | None:intergenic | 35.0% |
| ! | GGAGTATTACTGGAATTTAC+GGG | - | chr8.1:3095213-3095232 | MS.gene035626:CDS | 35.0% |
| ! | GGATTTTCTTCAAGTACGAA+AGG | - | chr8.1:3094218-3094237 | MS.gene035626:CDS | 35.0% |
| ! | GGCAAAAATTGGAGTATTAC+TGG | - | chr8.1:3095203-3095222 | MS.gene035626:CDS | 35.0% |
| ! | TAATGTCACTGATAGTGTTG+TGG | - | chr8.1:3094777-3094796 | MS.gene035626:CDS | 35.0% |
| ! | TCCTCAAGTGGTTTTCTTAA+TGG | - | chr8.1:3094983-3095002 | MS.gene035626:CDS | 35.0% |
| !! | AACTCTTAAGTTGGAATTGC+AGG | - | chr8.1:3094904-3094923 | MS.gene035626:CDS | 35.0% |
| !! | ACTCTTAAGTTGGAATTGCA+GGG | - | chr8.1:3094905-3094924 | MS.gene035626:CDS | 35.0% |
| !! | CTTCTTGATTTGGGCTTTAA+TGG | - | chr8.1:3095422-3095441 | MS.gene035626:CDS | 35.0% |
| !! | TGATGGATTTGGCAAAGAAA+GGG | - | chr8.1:3095082-3095101 | MS.gene035626:CDS | 35.0% |
| !! | TTTGTTCCTTGTGATGGATT+TGG | - | chr8.1:3095071-3095090 | MS.gene035626:CDS | 35.0% |
| !! | TTTGTTGAGAAGCCTTATTC+CGG | - | chr8.1:3095271-3095290 | MS.gene035626:CDS | 35.0% |
| !!! | ACATTTTGTTTTTCCACCAC+AGG | + | chr8.1:3094532-3094551 | None:intergenic | 35.0% |
| !!! | ATTTTGTTTTTCCACCACAG+GGG | + | chr8.1:3094530-3094549 | None:intergenic | 35.0% |
| !!! | CATTTTGTTTTTCCACCACA+GGG | + | chr8.1:3094531-3094550 | None:intergenic | 35.0% |
| !!! | GGCTTTTGGCTTTTGAATTT+TGG | + | chr8.1:3094710-3094729 | None:intergenic | 35.0% |
| !!! | TTTGAATTTTGGGACCCTTT+TGG | + | chr8.1:3094699-3094718 | None:intergenic | 35.0% |
| AACCACATATCCTCATCAAC+CGG | + | chr8.1:3095293-3095312 | None:intergenic | 40.0% | |
| AAGATCAAGCCTATGGTTCT+TGG | - | chr8.1:3094344-3094363 | MS.gene035626:intron | 40.0% | |
| AAGCCAAAAGCCCAAGATAA+AGG | - | chr8.1:3094718-3094737 | MS.gene035626:intron | 40.0% | |
| ACAAAATGTTGTGCTGGATG+CGG | - | chr8.1:3094543-3094562 | MS.gene035626:intron | 40.0% | |
| AGATGTGAAGCAATGGTTAG+AGG | - | chr8.1:3095683-3095702 | MS.gene035626:CDS | 40.0% | |
| AGCCAAAAGCCCAAGATAAA+GGG | - | chr8.1:3094719-3094738 | MS.gene035626:intron | 40.0% | |
| ATTACAGAGGGTGAAGCTTT+CGG | - | chr8.1:3093725-3093744 | MS.gene035626:intron | 40.0% | |
| CAAGCTGAGGTCTGATTTAA+TGG | - | chr8.1:3094042-3094061 | MS.gene035626:CDS | 40.0% | |
| CAGCCTTCTCTTCATTTGAA+AGG | + | chr8.1:3095340-3095359 | None:intergenic | 40.0% | |
| CCAACTTCTGCTACAAATGT+GGG | - | chr8.1:3094245-3094264 | MS.gene035626:CDS | 40.0% | |
| CCACATTTGTAGCAGAAGTT+GGG | + | chr8.1:3094247-3094266 | None:intergenic | 40.0% | |
| CCCCAATGAAACTCTTAAGT+TGG | - | chr8.1:3094895-3094914 | MS.gene035626:CDS | 40.0% | |
| CTCTAAACCATATTATGGGG+AGG | - | chr8.1:3095162-3095181 | MS.gene035626:CDS | 40.0% | |
| CTTAAGAGTTTCATTGGGGT+AGG | + | chr8.1:3094894-3094913 | None:intergenic | 40.0% | |
| CTTCAATCCTCCCCATAATA+TGG | + | chr8.1:3095172-3095191 | None:intergenic | 40.0% | |
| CTTCACATTCCTTCATCTGA+TGG | + | chr8.1:3094279-3094298 | None:intergenic | 40.0% | |
| CTTTCAAATGAAGAGAAGGC+TGG | - | chr8.1:3095338-3095357 | MS.gene035626:CDS | 40.0% | |
| GAAACAAGCAAGGCTATTGA+AGG | - | chr8.1:3094574-3094593 | MS.gene035626:intron | 40.0% | |
| GAAACCCAACTCAATAACCA+CGG | - | chr8.1:3095818-3095837 | MS.gene035626:CDS | 40.0% | |
| GAAACGAGACAAGATAGTGA+AGG | - | chr8.1:3094301-3094320 | MS.gene035626:intron | 40.0% | |
| GAAATCCATCCGAATCAAAG+TGG | - | chr8.1:3094132-3094151 | MS.gene035626:CDS | 40.0% | |
| GAAGAACAAGATCAAGCCTA+TGG | - | chr8.1:3094337-3094356 | MS.gene035626:intron | 40.0% | |
| GAGAGAGTCAGAATCAATTG+TGG | - | chr8.1:3095032-3095051 | MS.gene035626:CDS | 40.0% | |
| GAGGAAGATGTCATTACAGA+GGG | - | chr8.1:3093713-3093732 | MS.gene035626:intron | 40.0% | |
| GATAAAGGGAAGAAAGAAGG+TGG | - | chr8.1:3094733-3094752 | MS.gene035626:intron | 40.0% | |
| GCTGAAAACATCCTTCAATC+AGG | - | chr8.1:3093902-3093921 | MS.gene035626:CDS | 40.0% | |
| GGCGAAAAAAATTGGAGATC+TGG | - | chr8.1:3094063-3094082 | MS.gene035626:CDS | 40.0% | |
| GTTGGGTTCCTTCTTGAATT+CGG | + | chr8.1:3094401-3094420 | None:intergenic | 40.0% | |
| TAAATCAGACCTCAGCTTGA+GGG | + | chr8.1:3094041-3094060 | None:intergenic | 40.0% | |
| TATCCTCATCAACCGGAATA+AGG | + | chr8.1:3095286-3095305 | None:intergenic | 40.0% | |
| TATTGAGCTGGATGTGTGTT+TGG | - | chr8.1:3095598-3095617 | MS.gene035626:CDS | 40.0% | |
| TCAGATGAAGGAATGTGAAG+AGG | - | chr8.1:3094279-3094298 | MS.gene035626:intron | 40.0% | |
| TCTTTGCCAAATCCATCACA+AGG | + | chr8.1:3095080-3095099 | None:intergenic | 40.0% | |
| TGATGACAGATGTGAAGCAA+TGG | - | chr8.1:3095676-3095695 | MS.gene035626:CDS | 40.0% | |
| TTAAATCAGACCTCAGCTTG+AGG | + | chr8.1:3094042-3094061 | None:intergenic | 40.0% | |
| TTATCTCAAAAGTCTGCAGC+TGG | - | chr8.1:3094625-3094644 | MS.gene035626:intron | 40.0% | |
| TTGGGTTCCTTCTTGAATTC+GGG | + | chr8.1:3094400-3094419 | None:intergenic | 40.0% | |
| ! | CCACTTGAGGATTTTGGATA+CGG | + | chr8.1:3094974-3094993 | None:intergenic | 40.0% |
| ! | CTGCCATTTGACCATGTAAA+AGG | + | chr8.1:3095452-3095471 | None:intergenic | 40.0% |
| ! | TAGTGAAGGGTATACAGATG+TGG | - | chr8.1:3094315-3094334 | MS.gene035626:intron | 40.0% |
| ! | TGTTCCGGTTTGAAAAGTGT+TGG | - | chr8.1:3095648-3095667 | MS.gene035626:CDS | 40.0% |
| ! | TTCCCTTTATCTTGGGCTTT+TGG | + | chr8.1:3094724-3094743 | None:intergenic | 40.0% |
| ! | TTTTCAAACCGGAACACATG+AGG | + | chr8.1:3095644-3095663 | None:intergenic | 40.0% |
| !! | CTCTTAAGTTGGAATTGCAG+GGG | - | chr8.1:3094906-3094925 | MS.gene035626:CDS | 40.0% |
| !! | GTGATGGATTTGGCAAAGAA+AGG | - | chr8.1:3095081-3095100 | MS.gene035626:CDS | 40.0% |
| !! | GTTCCGGTTTGAAAAGTGTT+GGG | - | chr8.1:3095649-3095668 | MS.gene035626:CDS | 40.0% |
| !! | TCTTAAGTTGGAATTGCAGG+GGG | - | chr8.1:3094907-3094926 | MS.gene035626:CDS | 40.0% |
| !! | TGCTGCTATTTCTATTGAGC+TGG | - | chr8.1:3095586-3095605 | MS.gene035626:CDS | 40.0% |
| !!! | AGCTGCAGACTTTTGAGATA+AGG | + | chr8.1:3094626-3094645 | None:intergenic | 40.0% |
| !!! | AGGATATGTGGTTTTGTTGC+GGG | - | chr8.1:3095300-3095319 | MS.gene035626:CDS | 40.0% |
| !!! | GAGGATATGTGGTTTTGTTG+CGG | - | chr8.1:3095299-3095318 | MS.gene035626:CDS | 40.0% |
| AAAATGTTGTGCTGGATGCG+GGG | - | chr8.1:3094545-3094564 | MS.gene035626:intron | 45.0% | |
| AAACAGAGGAGACTATGTGG+CGG | - | chr8.1:3095912-3095931 | MS.gene035626:CDS | 45.0% | |
| AAAGAAGTGGAGTCGCCAAA+AGG | - | chr8.1:3094681-3094700 | MS.gene035626:intron | 45.0% | |
| AAATCAGACCTCAGCTTGAG+GGG | + | chr8.1:3094040-3094059 | None:intergenic | 45.0% | |
| AAGAAGTGGAGTCGCCAAAA+GGG | - | chr8.1:3094682-3094701 | MS.gene035626:intron | 45.0% | |
| AAGAGTTTCATTGGGGTAGG+AGG | + | chr8.1:3094891-3094910 | None:intergenic | 45.0% | |
| AAGCAAGGCTATTGAAGGTG+TGG | - | chr8.1:3094579-3094598 | MS.gene035626:intron | 45.0% | |
| ACATGGTCAAATGGCAGACA+GGG | - | chr8.1:3095455-3095474 | MS.gene035626:CDS | 45.0% | |
| ACTTCTGCTACAAATGTGGG+AGG | - | chr8.1:3094248-3094267 | MS.gene035626:CDS | 45.0% | |
| AGACAATGATCCAAGCTTGG+AGG | - | chr8.1:3093807-3093826 | MS.gene035626:intron | 45.0% | |
| AGCAGACAATGATCCAAGCT+TGG | - | chr8.1:3093804-3093823 | MS.gene035626:intron | 45.0% | |
| AGCTCTCATCCAAGAACCAT+AGG | + | chr8.1:3094356-3094375 | None:intergenic | 45.0% | |
| AGCTGGTGCGAAGGATAAAA+AGG | - | chr8.1:3094642-3094661 | MS.gene035626:intron | 45.0% | |
| AGCTTGGAGGCTGAAGAATA+CGG | - | chr8.1:3093820-3093839 | MS.gene035626:intron | 45.0% | |
| CAAAATGTTGTGCTGGATGC+GGG | - | chr8.1:3094544-3094563 | MS.gene035626:intron | 45.0% | |
| CAAGGGACAACAACAGAATG+GGG | - | chr8.1:3094110-3094129 | MS.gene035626:CDS | 45.0% | |
| CCAAGGGACAACAACAGAAT+GGG | - | chr8.1:3094109-3094128 | MS.gene035626:CDS | 45.0% | |
| CCCAACTTCTGCTACAAATG+TGG | - | chr8.1:3094244-3094263 | MS.gene035626:CDS | 45.0% | |
| CCCACATTTGTAGCAGAAGT+TGG | + | chr8.1:3094248-3094267 | None:intergenic | 45.0% | |
| CCGTATCCAAAATCCTCAAG+TGG | - | chr8.1:3094971-3094990 | MS.gene035626:CDS | 45.0% | |
| CGAAAAAGCCTCATGTGTTC+CGG | - | chr8.1:3095633-3095652 | MS.gene035626:CDS | 45.0% | |
| CTCAGAATCAAGGGATTGCA+TGG | + | chr8.1:3095750-3095769 | None:intergenic | 45.0% | |
| GAGAGCTTCTCCATTACCAA+AGG | - | chr8.1:3094369-3094388 | MS.gene035626:intron | 45.0% | |
| GATACGGTTGAGCCTTAACA+AGG | + | chr8.1:3094958-3094977 | None:intergenic | 45.0% | |
| GATAGTGTTGTGGAGGTGAT+GGG | - | chr8.1:3094787-3094806 | MS.gene035626:CDS | 45.0% | |
| GCACACTAGTAGGAAAGATC+TGG | - | chr8.1:3093750-3093769 | MS.gene035626:intron | 45.0% | |
| GCTGTCCTTGAGTAGAAATG+CGG | - | chr8.1:3095385-3095404 | MS.gene035626:CDS | 45.0% | |
| GGAGGAAGATGTCATTACAG+AGG | - | chr8.1:3093712-3093731 | MS.gene035626:intron | 45.0% | |
| GGGTTGTTTGTTCCTTGTGA+TGG | - | chr8.1:3095065-3095084 | MS.gene035626:CDS | 45.0% | |
| GTCTCTGCTTCGATAACATC+TGG | + | chr8.1:3094508-3094527 | None:intergenic | 45.0% | |
| TACATGGTCAAATGGCAGAC+AGG | - | chr8.1:3095454-3095473 | MS.gene035626:CDS | 45.0% | |
| TACTGGAATTTACGGGTACC+CGG | - | chr8.1:3095220-3095239 | MS.gene035626:CDS | 45.0% | |
| TATCAAGAGAACCATCCCAC+AGG | + | chr8.1:3095844-3095863 | None:intergenic | 45.0% | |
| TATTCTTCAGCCTCCAAGCT+TGG | + | chr8.1:3093820-3093839 | None:intergenic | 45.0% | |
| TCAAATGAAGAGAAGGCTGG+TGG | - | chr8.1:3095341-3095360 | MS.gene035626:CDS | 45.0% | |
| TCAAGTAAGTGTTCCGAAGC+AGG | - | chr8.1:3094460-3094479 | MS.gene035626:intron | 45.0% | |
| TCCAAACAGAGGAGACTATG+TGG | - | chr8.1:3095909-3095928 | MS.gene035626:CDS | 45.0% | |
| TCCAAGGGACAACAACAGAA+TGG | - | chr8.1:3094108-3094127 | MS.gene035626:CDS | 45.0% | |
| TGCGTGAGGAAAACTTGAAC+AGG | + | chr8.1:3093877-3093896 | None:intergenic | 45.0% | |
| TGCTACAAATGTGGGAGGAT+TGG | - | chr8.1:3094253-3094272 | MS.gene035626:CDS | 45.0% | |
| TGGTATAGCGCTTATGTGGA+TGG | - | chr8.1:3095109-3095128 | MS.gene035626:CDS | 45.0% | |
| TGTCCCTTGGATTCACTTCA+AGG | + | chr8.1:3094099-3094118 | None:intergenic | 45.0% | |
| TTAATGGAGGAAGAGGGTGA+AGG | - | chr8.1:3093680-3093699 | MS.gene035626:CDS | 45.0% | |
| TTACTGCACGTACCTGTGTT+GGG | + | chr8.1:3094418-3094437 | None:intergenic | 45.0% | |
| TTCAAGAAGGAACCCAACAC+AGG | - | chr8.1:3094403-3094422 | MS.gene035626:intron | 45.0% | |
| TTCCACCGCATTTCTACTCA+AGG | + | chr8.1:3095393-3095412 | None:intergenic | 45.0% | |
| TTGAATTCGGGCTGAACCTT+TGG | + | chr8.1:3094388-3094407 | None:intergenic | 45.0% | |
| ! | CAGCCCAACACTTTTCAAAC+CGG | + | chr8.1:3095655-3095674 | None:intergenic | 45.0% |
| ! | GATAACATCTGGCGCTTTTG+AGG | + | chr8.1:3094497-3094516 | None:intergenic | 45.0% |
| ! | GGTCTATCGCCACTTTGATT+CGG | + | chr8.1:3094144-3094163 | None:intergenic | 45.0% |
| ! | GTGTGTAAATCCAGCTCTGA+AGG | + | chr8.1:3093986-3094005 | None:intergenic | 45.0% |
| ! | TGATAGTGTTGTGGAGGTGA+TGG | - | chr8.1:3094786-3094805 | MS.gene035626:CDS | 45.0% |
| ! | TGTCACTGATAGTGTTGTGG+AGG | - | chr8.1:3094780-3094799 | MS.gene035626:CDS | 45.0% |
| !! | AAGCCTTATTCCGGTTGATG+AGG | - | chr8.1:3095280-3095299 | MS.gene035626:CDS | 45.0% |
| !! | TATCGCCACTTTGATTCGGA+TGG | + | chr8.1:3094140-3094159 | None:intergenic | 45.0% |
| !! | TTCCGGTTGATGAGGATATG+TGG | - | chr8.1:3095288-3095307 | MS.gene035626:CDS | 45.0% |
| !!! | GGATATGTGGTTTTGTTGCG+GGG | - | chr8.1:3095301-3095320 | MS.gene035626:CDS | 45.0% |
| AACTCAATAACCACGGCCTG+TGG | - | chr8.1:3095825-3095844 | MS.gene035626:CDS | 50.0% | |
| AAGCAATGGTTAGAGGCTCC+TGG | - | chr8.1:3095690-3095709 | MS.gene035626:CDS | 50.0% | |
| AAGTTACGGTCGAAGCTCCA+CGG | + | chr8.1:3093929-3093948 | None:intergenic | 50.0% | |
| AAGTTGGAATTGCAGGGGGT+TGG | - | chr8.1:3094911-3094930 | MS.gene035626:CDS | 50.0% | |
| ACAGGCCGTGGTTATTGAGT+TGG | + | chr8.1:3095826-3095845 | None:intergenic | 50.0% | |
| ACATCCTTCAATCAGGTCCG+TGG | - | chr8.1:3093909-3093928 | MS.gene035626:CDS | 50.0% | |
| ACTCAATAACCACGGCCTGT+GGG | - | chr8.1:3095826-3095845 | MS.gene035626:CDS | 50.0% | |
| AGCACAGTACCTCGCTTCAA+CGG | + | chr8.1:3094175-3094194 | None:intergenic | 50.0% | |
| AGTTGGAATTGCAGGGGGTT+GGG | - | chr8.1:3094912-3094931 | MS.gene035626:CDS | 50.0% | |
| ATGATCTTCCCCTCAAGCTG+AGG | - | chr8.1:3094029-3094048 | MS.gene035626:CDS | 50.0% | |
| CAGGCCGTGGTTATTGAGTT+GGG | + | chr8.1:3095825-3095844 | None:intergenic | 50.0% | |
| CAGGTGGTATAGCGCTTATG+TGG | - | chr8.1:3095105-3095124 | MS.gene035626:CDS | 50.0% | |
| CCCATTCTGTTGTTGTCCCT+TGG | + | chr8.1:3094112-3094131 | None:intergenic | 50.0% | |
| CTTACTGCACGTACCTGTGT+TGG | + | chr8.1:3094419-3094438 | None:intergenic | 50.0% | |
| GCCACATAGTCTCCTCTGTT+TGG | + | chr8.1:3095913-3095932 | None:intergenic | 50.0% | |
| GGAAGAAAGAAGGTGGGAAG+AGG | - | chr8.1:3094740-3094759 | MS.gene035626:intron | 50.0% | |
| GGAAGAGGGTGAAGGAATCA+CGG | - | chr8.1:3093688-3093707 | MS.gene035626:CDS | 50.0% | |
| GGATTTGGCAAAGAAAGGGC+AGG | - | chr8.1:3095086-3095105 | MS.gene035626:CDS | 50.0% | |
| GGGGTCTGAAGAAACAAGCA+AGG | - | chr8.1:3094564-3094583 | MS.gene035626:intron | 50.0% | |
| GGTTCAGCCCGAATTCAAGA+AGG | - | chr8.1:3094390-3094409 | MS.gene035626:intron | 50.0% | |
| GTCCTTGAGTAGAAATGCGG+TGG | - | chr8.1:3095388-3095407 | MS.gene035626:CDS | 50.0% | |
| TAAGTGTTCCGAAGCAGGAG+AGG | - | chr8.1:3094465-3094484 | MS.gene035626:intron | 50.0% | |
| TCAAAGTGGCGATAGACCTG+AGG | - | chr8.1:3094146-3094165 | MS.gene035626:CDS | 50.0% | |
| TCAAATGGCAGACAGGGAAG+TGG | - | chr8.1:3095461-3095480 | MS.gene035626:CDS | 50.0% | |
| TCGGGCTGAACCTTTGGTAA+TGG | + | chr8.1:3094382-3094401 | None:intergenic | 50.0% | |
| TGAGCTGGATGTGTGTTTGG+AGG | - | chr8.1:3095601-3095620 | MS.gene035626:CDS | 50.0% | |
| TGATGAGCAACCTTCAGAGC+TGG | - | chr8.1:3093973-3093992 | MS.gene035626:CDS | 50.0% | |
| TGTGGCTGAAACTCTAGGCT+CGG | - | chr8.1:3094597-3094616 | MS.gene035626:intron | 50.0% | |
| TTCAGAGCTGCTCCAAACAG+AGG | - | chr8.1:3095898-3095917 | MS.gene035626:CDS | 50.0% | |
| TTTGGCAAAGAAAGGGCAGG+TGG | - | chr8.1:3095089-3095108 | MS.gene035626:CDS | 50.0% | |
| ! | CAATAAACCAGAGGGGGTGT+TGG | - | chr8.1:3094855-3094874 | MS.gene035626:CDS | 50.0% |
| ! | GAAGGTGTGGCTGAAACTCT+AGG | - | chr8.1:3094592-3094611 | MS.gene035626:intron | 50.0% |
| ! | GGTTTTCTCCTCTCCTGCTT+CGG | + | chr8.1:3094476-3094495 | None:intergenic | 50.0% |
| ! | GTTTTCAGCATCTCTGCGTG+AGG | + | chr8.1:3093891-3093910 | None:intergenic | 50.0% |
| ! | TTCATTGGGGTAGGAGGTGT+TGG | + | chr8.1:3094885-3094904 | None:intergenic | 50.0% |
| !! | GAGGATTGGCCATCAGATGA+AGG | - | chr8.1:3094267-3094286 | MS.gene035626:intron | 50.0% |
| !! | GGGCAATTCGAGCCTTGTTA+AGG | - | chr8.1:3094943-3094962 | MS.gene035626:CDS | 50.0% |
| AAAGTCTGCAGCTGGTGCGA+AGG | - | chr8.1:3094633-3094652 | MS.gene035626:intron | 55.0% | |
| AACAAGGCTCGAATTGCCCG+AGG | + | chr8.1:3094942-3094961 | None:intergenic | 55.0% | |
| AATAACCACGGCCTGTGGGA+TGG | - | chr8.1:3095830-3095849 | MS.gene035626:CDS | 55.0% | |
| ACAAGGCTCGAATTGCCCGA+GGG | + | chr8.1:3094941-3094960 | None:intergenic | 55.0% | |
| AGAAAGGGTCGCGCGGTTAA+TGG | - | chr8.1:3093664-3093683 | MS.gene035626:CDS | 55.0% | |
| AGAGGGTGAAGGAATCACGG+TGG | - | chr8.1:3093691-3093710 | MS.gene035626:CDS | 55.0% | |
| AGCTCCACGGACCTGATTGA+AGG | + | chr8.1:3093916-3093935 | None:intergenic | 55.0% | |
| GCACAGTACCTCGCTTCAAC+GGG | + | chr8.1:3094174-3094193 | None:intergenic | 55.0% | |
| GCGCGGTTAATGGAGGAAGA+GGG | - | chr8.1:3093674-3093693 | MS.gene035626:CDS | 55.0% | |
| GCTTTCGGTCGCACACTAGT+AGG | - | chr8.1:3093740-3093759 | MS.gene035626:intron | 55.0% | |
| GTTGGAATTGCAGGGGGTTG+GGG | - | chr8.1:3094913-3094932 | MS.gene035626:CDS | 55.0% | |
| TATCGAAGCAGAGACCCCTG+TGG | - | chr8.1:3094513-3094532 | MS.gene035626:intron | 55.0% | |
| TGGACAAAGAAAGGGTCGCG+CGG | - | chr8.1:3093657-3093676 | MS.gene035626:CDS | 55.0% | |
| !! | AGTGTTGTGGAGGTGATGGG+TGG | - | chr8.1:3094790-3094809 | MS.gene035626:CDS | 55.0% |
| AAGGGTCGCGCGGTTAATGG+AGG | - | chr8.1:3093667-3093686 | MS.gene035626:CDS | 60.0% | |
| AGGAGACTATGTGGCGGCAG+AGG | - | chr8.1:3095918-3095937 | MS.gene035626:CDS | 60.0% | |
| CGCGCGGTTAATGGAGGAAG+AGG | - | chr8.1:3093673-3093692 | MS.gene035626:CDS | 60.0% | |
| CTATGTGGCGGCAGAGGAGT+CGG | - | chr8.1:3095924-3095943 | MS.gene035626:CDS | 60.0% | |
| CTGAGGAACCCGTTGAAGCG+AGG | - | chr8.1:3094163-3094182 | MS.gene035626:CDS | 60.0% | |
| GGCAACGTGGCTGAAGGAAG+GGG | - | chr8.1:3095946-3095965 | MS.gene035626:CDS | 60.0% | |
| GGGCAACGTGGCTGAAGGAA+GGG | - | chr8.1:3095945-3095964 | MS.gene035626:CDS | 60.0% | |
| GGGTGAAGGAATCACGGTGG+AGG | - | chr8.1:3093694-3093713 | MS.gene035626:CDS | 60.0% | |
| TATGTGGCGGCAGAGGAGTC+GGG | - | chr8.1:3095925-3095944 | MS.gene035626:CDS | 60.0% | |
| TGGTCATCCAACACCCCCTC+TGG | + | chr8.1:3094865-3094884 | None:intergenic | 60.0% | |
| ! | CTCGCTTCAACGGGTTCCTC+AGG | + | chr8.1:3094165-3094184 | None:intergenic | 60.0% |
| CGAAGCAGAGACCCCTGTGG+TGG | - | chr8.1:3094516-3094535 | MS.gene035626:intron | 65.0% | |
| CGGGCAACGTGGCTGAAGGA+AGG | - | chr8.1:3095944-3095963 | MS.gene035626:CDS | 65.0% | |
| GAGAACCATCCCACAGGCCG+TGG | + | chr8.1:3095838-3095857 | None:intergenic | 65.0% | |
| GAGTCGGGCAACGTGGCTGA+AGG | - | chr8.1:3095940-3095959 | MS.gene035626:CDS | 65.0% | |
| CAGGGGGTTGGGGAACCCTC+GGG | - | chr8.1:3094923-3094942 | MS.gene035626:CDS | 70.0% | |
| GCAGGGGGTTGGGGAACCCT+CGG | - | chr8.1:3094922-3094941 | MS.gene035626:CDS | 70.0% | |
| GGCAGAGGAGTCGGGCAACG+TGG | - | chr8.1:3095933-3095952 | MS.gene035626:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 3093656 | 3095972 | 3093656 | ID=MS.gene035626 |
| chr8.1 | mRNA | 3093656 | 3095972 | 3093656 | ID=MS.gene035626.t1;Parent=MS.gene035626 |
| chr8.1 | exon | 3094758 | 3095972 | 3094758 | ID=MS.gene035626.t1.exon1;Parent=MS.gene035626.t1 |
| chr8.1 | CDS | 3094758 | 3095972 | 3094758 | ID=cds.MS.gene035626.t1;Parent=MS.gene035626.t1 |
| chr8.1 | exon | 3093851 | 3094272 | 3093851 | ID=MS.gene035626.t1.exon2;Parent=MS.gene035626.t1 |
| chr8.1 | CDS | 3093851 | 3094272 | 3093851 | ID=cds.MS.gene035626.t1;Parent=MS.gene035626.t1 |
| chr8.1 | exon | 3093656 | 3093725 | 3093656 | ID=MS.gene035626.t1.exon3;Parent=MS.gene035626.t1 |
| chr8.1 | CDS | 3093656 | 3093725 | 3093656 | ID=cds.MS.gene035626.t1;Parent=MS.gene035626.t1 |
| Gene Sequence |
| Protein sequence |