AlfalfaGEDB | MS.gene000634

M. sativa cultivar XinJiangDaYe / MS.gene000634

KEGG: -
GO: GO:0003674 GO:0003676 GO:0005488 GO:0008270 GO:0043167 GO:0043169 GO:0046872 GO:0046914 GO:0097159 GO:1901363
PFAM: PF14392.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene000634.t1	XP_024630605.1	43.5	184	92	2	1	173	127	309	5.20E-33	151.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene000634.t1	G7J017	62.5	128	31	1	56	166	153	280	2.4e-32	148.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene85295	MS.gene000634	PPI
MS.gene47792	MS.gene000634	PPI
MS.gene46948	MS.gene000634	PPI
MS.gene025873	MS.gene000634	PPI
MS.gene012019	MS.gene000634	PPI
MS.gene000634	MS.gene80362	PPI
MS.gene000634	MS.gene49057	PPI
MS.gene05358	MS.gene000634	PPI
MS.gene000634	MS.gene89815	PPI
MS.gene93396	MS.gene000634	PPI
MS.gene000634	MS.gene018474	PPI
MS.gene000634	MS.gene048088	PPI
MS.gene000634	MS.gene86868	PPI
MS.gene000634	MS.gene058889	PPI
MS.gene000634	MS.gene96163	PPI
MS.gene010656	MS.gene000634	PPI
MS.gene000629	MS.gene000634	PPI
MS.gene000634	MS.gene034643	PPI
MS.gene41979	MS.gene000634	PPI
MS.gene05319	MS.gene000634	PPI
MS.gene56991	MS.gene000634	PPI
MS.gene000634	MS.gene012889	PPI
MS.gene000634	MS.gene34463	PPI
MS.gene055223	MS.gene000634	PPI
MS.gene000634	MS.gene038757	PPI
MS.gene28545	MS.gene000634	PPI
MS.gene053747	MS.gene000634	PPI
MS.gene000634	MS.gene61499	PPI
MS.gene000634	MS.gene51804	PPI
MS.gene65471	MS.gene000634	PPI
MS.gene000634	MS.gene013644	PPI
MS.gene061850	MS.gene000634	PPI
MS.gene98616	MS.gene000634	PPI
MS.gene042027	MS.gene000634	PPI
MS.gene000634	MS.gene025675	PPI
MS.gene69490	MS.gene000634	PPI
MS.gene000634	MS.gene04970	PPI
MS.gene015248	MS.gene000634	PPI
MS.gene000634	MS.gene71637	PPI
MS.gene000634	MS.gene43924	PPI
MS.gene72520	MS.gene000634	PPI
MS.gene44083	MS.gene000634	PPI
MS.gene013193	MS.gene000634	PPI
MS.gene08106	MS.gene000634	PPI
MS.gene000634	MS.gene022929	PPI
MS.gene000634	MS.gene26433	PPI
MS.gene000634	MS.gene007022	PPI
MS.gene000634	MS.gene69584	PPI
MS.gene000634	MS.gene52349	PPI
MS.gene23521	MS.gene000634	PPI
MS.gene000634	MS.gene021647	PPI
MS.gene000634	MS.gene048342	PPI
MS.gene000634	MS.gene069624	PPI
MS.gene87529	MS.gene000634	PPI
MS.gene024405	MS.gene000634	PPI
MS.gene012748	MS.gene000634	PPI
MS.gene04134	MS.gene000634	PPI
MS.gene83979	MS.gene000634	PPI
MS.gene062067	MS.gene000634	PPI
MS.gene000634	MS.gene073582	PPI
MS.gene000634	MS.gene016719	PPI
MS.gene000634	MS.gene028714	PPI
MS.gene57044	MS.gene000634	PPI
MS.gene000634	MS.gene88393	PPI
MS.gene000634	MS.gene042027	PPI
MS.gene000634	MS.gene048706	PPI
MS.gene000634	MS.gene69586	PPI
MS.gene000634	MS.gene45083	PPI
MS.gene000634	MS.gene049561	PPI
MS.gene038676	MS.gene000634	PPI
MS.gene000634	MS.gene008658	PPI
MS.gene042651	MS.gene000634	PPI
MS.gene000634	MS.gene63150	PPI
MS.gene000634	MS.gene03936	PPI
MS.gene000634	MS.gene072852	PPI
MS.gene05231	MS.gene000634	PPI
MS.gene000634	MS.gene08708	PPI
MS.gene000634	MS.gene06164	PPI
MS.gene000634	MS.gene50392	PPI
MS.gene000634	MS.gene86275	PPI
MS.gene000634	MS.gene017586	PPI
MS.gene64130	MS.gene000634	PPI
MS.gene000634	MS.gene037634	PPI
MS.gene000634	MS.gene057828	PPI
MS.gene000634	MS.gene071320	PPI
MS.gene000634	MS.gene08606	PPI
MS.gene050679	MS.gene000634	PPI
MS.gene000634	MS.gene000640	PPI
MS.gene20246	MS.gene000634	PPI
MS.gene000634	MS.gene000506	PPI
MS.gene000634	MS.gene98756	PPI
MS.gene071784	MS.gene000634	PPI
MS.gene000634	MS.gene39956	PPI
MS.gene000634	MS.gene028716	PPI
MS.gene000634	MS.gene74639	PPI
MS.gene000634	MS.gene071133	PPI
MS.gene000634	MS.gene64130	PPI
MS.gene000634	MS.gene60266	PPI
MS.gene000634	MS.gene98467	PPI
MS.gene071320	MS.gene000634	PPI
MS.gene000634	MS.gene024522	PPI
MS.gene000634	MS.gene54051	PPI
MS.gene000634	MS.gene22111	PPI
MS.gene000634	MS.gene049610	PPI
MS.gene000634	MS.gene010290	PPI
MS.gene000634	MS.gene37955	PPI
MS.gene000634	MS.gene92517	PPI
MS.gene000634	MS.gene36069	PPI
MS.gene042559	MS.gene000634	PPI
MS.gene22200	MS.gene000634	PPI
MS.gene000634	MS.gene045875	PPI
MS.gene000634	MS.gene010890	PPI
MS.gene000634	MS.gene84790	PPI
MS.gene000634	MS.gene061579	PPI
MS.gene26038	MS.gene000634	PPI
MS.gene85308	MS.gene000634	PPI
MS.gene000634	MS.gene002590	PPI
MS.gene000634	MS.gene41979	PPI
MS.gene34812	MS.gene000634	PPI
MS.gene000634	MS.gene060788	PPI
MS.gene02896	MS.gene000634	PPI
MS.gene000634	MS.gene41643	PPI
MS.gene063214	MS.gene000634	PPI
MS.gene000634	MS.gene77990	PPI
MS.gene000634	MS.gene65546	PPI
MS.gene000634	MS.gene062511	PPI
MS.gene000634	MS.gene027994	PPI
MS.gene000634	MS.gene059269	PPI
MS.gene067340	MS.gene000634	PPI
MS.gene65623	MS.gene000634	PPI
MS.gene000634	MS.gene76420	PPI
MS.gene69495	MS.gene000634	PPI
MS.gene049512	MS.gene000634	PPI
MS.gene000634	MS.gene46353	PPI
MS.gene038623	MS.gene000634	PPI
MS.gene000634	MS.gene51799	PPI
MS.gene05357	MS.gene000634	PPI
MS.gene000634	MS.gene98471	PPI
MS.gene032311	MS.gene000634	PPI
MS.gene000634	MS.gene61651	PPI
MS.gene000634	MS.gene29406	PPI
MS.gene86849	MS.gene000634	PPI
MS.gene000634	MS.gene09023	PPI
MS.gene000634	MS.gene054508	PPI
MS.gene000634	MS.gene025987	PPI
MS.gene000634	MS.gene95960	PPI
MS.gene000634	MS.gene053373	PPI
MS.gene000634	MS.gene043140	PPI
MS.gene39956	MS.gene000634	PPI
MS.gene000634	MS.gene041264	PPI
MS.gene021968	MS.gene000634	PPI
MS.gene09589	MS.gene000634	PPI
MS.gene000634	MS.gene29321	PPI
MS.gene43393	MS.gene000634	PPI
MS.gene000634	MS.gene65474	PPI
MS.gene000634	MS.gene025401	PPI
MS.gene000634	MS.gene015093	PPI
MS.gene000634	MS.gene22730	PPI
MS.gene000634	MS.gene24278	PPI
MS.gene000634	MS.gene000379	PPI
MS.gene000634	MS.gene032299	PPI
MS.gene005120	MS.gene000634	PPI
MS.gene000634	MS.gene009121	PPI
MS.gene048072	MS.gene000634	PPI
MS.gene060386	MS.gene000634	PPI
MS.gene71588	MS.gene000634	PPI
MS.gene04749	MS.gene000634	PPI
MS.gene000634	MS.gene08713	PPI
MS.gene000634	MS.gene70932	PPI
MS.gene000634	MS.gene09517	PPI
MS.gene05436	MS.gene000634	PPI
MS.gene000634	MS.gene87845	PPI
MS.gene059736	MS.gene000634	PPI
MS.gene70932	MS.gene000634	PPI
MS.gene000634	MS.gene85308	PPI
MS.gene000634	MS.gene62249	PPI
MS.gene000634	MS.gene58419	PPI
MS.gene42903	MS.gene000634	PPI
MS.gene81712	MS.gene000634	PPI
MS.gene021965	MS.gene000634	PPI
MS.gene055683	MS.gene000634	PPI
MS.gene042614	MS.gene000634	PPI
MS.gene021555	MS.gene000634	PPI
MS.gene048747	MS.gene000634	PPI
MS.gene000634	MS.gene021555	PPI
MS.gene000634	MS.gene05576	PPI
MS.gene000634	MS.gene044729	PPI
MS.gene000634	MS.gene60390	PPI
MS.gene000634	MS.gene48477	PPI
MS.gene000634	MS.gene039692	PPI
MS.gene000634	MS.gene027169	PPI
MS.gene009121	MS.gene000634	PPI
MS.gene94654	MS.gene000634	PPI
MS.gene000634	MS.gene55682	PPI
MS.gene000634	MS.gene81712	PPI
MS.gene000634	MS.gene019177	PPI
MS.gene031967	MS.gene000634	PPI
MS.gene000634	MS.gene005120	PPI
MS.gene97410	MS.gene000634	PPI
MS.gene83772	MS.gene000634	PPI
MS.gene32415	MS.gene000634	PPI
MS.gene000634	MS.gene055560	PPI
MS.gene035626	MS.gene000634	PPI
MS.gene000634	MS.gene024297	PPI
MS.gene008927	MS.gene000634	PPI
MS.gene045614	MS.gene000634	PPI
MS.gene000634	MS.gene057934	PPI
MS.gene000634	MS.gene37537	PPI
MS.gene000634	MS.gene024841	PPI
MS.gene63762	MS.gene000634	PPI
MS.gene000634	MS.gene069786	PPI
MS.gene71675	MS.gene000634	PPI
MS.gene000634	MS.gene42010	PPI
MS.gene30208	MS.gene000634	PPI
MS.gene000634	MS.gene025158	PPI
MS.gene000634	MS.gene40828	PPI
MS.gene000634	MS.gene27329	PPI
MS.gene000634	MS.gene41393	PPI
MS.gene013676	MS.gene000634	PPI
MS.gene030090	MS.gene000634	PPI
MS.gene95561	MS.gene000634	PPI
MS.gene000634	MS.gene016632	PPI
MS.gene96174	MS.gene000634	PPI
MS.gene018196	MS.gene000634	PPI
MS.gene065627	MS.gene000634	PPI
MS.gene000634	MS.gene40469	PPI
MS.gene57019	MS.gene000634	PPI
MS.gene018745	MS.gene000634	PPI
MS.gene65546	MS.gene000634	PPI
MS.gene000634	MS.gene03149	PPI
MS.gene038098	MS.gene000634	PPI
MS.gene60059	MS.gene000634	PPI
MS.gene34197	MS.gene000634	PPI
MS.gene000634	MS.gene037049	PPI
MS.gene000634	MS.gene042614	PPI
MS.gene008275	MS.gene000634	PPI
MS.gene000634	MS.gene026680	PPI
MS.gene000634	MS.gene34618	PPI
MS.gene064966	MS.gene000634	PPI
MS.gene000634	MS.gene59460	PPI
MS.gene000634	MS.gene019165	PPI
MS.gene000634	MS.gene81194	PPI
MS.gene000634	MS.gene060773	PPI
MS.gene000634	MS.gene66650	PPI
MS.gene000634	MS.gene038394	PPI
MS.gene000634	MS.gene019001	PPI
MS.gene000634	MS.gene024405	PPI
MS.gene046089	MS.gene000634	PPI
MS.gene000634	MS.gene53904	PPI
MS.gene047954	MS.gene000634	PPI
MS.gene000634	MS.gene24070	PPI
MS.gene35175	MS.gene000634	PPI
MS.gene000634	MS.gene73261	PPI
MS.gene036423	MS.gene000634	PPI
MS.gene000634	MS.gene85538	PPI
MS.gene000634	MS.gene26844	PPI
MS.gene000634	MS.gene64178	PPI
MS.gene000634	MS.gene055546	PPI
MS.gene000634	MS.gene55209	PPI
MS.gene000634	MS.gene96174	PPI
MS.gene000634	MS.gene074257	PPI
MS.gene000634	MS.gene073573	PPI
MS.gene000634	MS.gene28718	PPI
MS.gene66651	MS.gene000634	PPI
MS.gene000634	MS.gene44144	PPI
MS.gene96109	MS.gene000634	PPI
MS.gene000634	MS.gene060718	PPI
MS.gene35202	MS.gene000634	PPI
MS.gene051449	MS.gene000634	PPI
MS.gene000634	MS.gene63743	PPI
MS.gene63743	MS.gene000634	PPI
MS.gene000634	MS.gene068629	PPI
MS.gene000634	MS.gene004417	PPI
MS.gene000634	MS.gene009781	PPI
MS.gene30136	MS.gene000634	PPI
MS.gene008861	MS.gene000634	PPI
MS.gene61452	MS.gene000634	PPI
MS.gene000634	MS.gene21066	PPI
MS.gene000634	MS.gene009213	PPI
MS.gene000634	MS.gene013890	PPI
MS.gene000634	MS.gene98127	PPI
MS.gene016102	MS.gene000634	PPI
MS.gene46941	MS.gene000634	PPI
MS.gene96541	MS.gene000634	PPI
MS.gene000634	MS.gene003264	PPI
MS.gene000634	MS.gene054652	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene000634.t1	MTR_3g053920	59.375	128	35	2	56	166	153	280	2.50e-40	139
MS.gene000634.t1	MTR_8g463110	79.000	100	21	0	129	228	21	120	2.58e-34	129

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 69 sgRNAs with CRISPR-Local

Find 77 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTACCGATACGTTTCAAATT+AGG	0.227389	5.1:-19239606	None:intergenic
CTGACGACGGTGTCCGTAAC+TGG	0.261198	5.1:+19239568	MS.gene000634:CDS
GAATTTGCAGCAGTAGTAAA+AGG	0.292724	5.1:-19239960	None:intergenic
GATGAGGGAAATACAGTAAT+AGG	0.305593	5.1:+19240071	MS.gene000634:CDS
CACCTTCAGCAGTTACATTT+CGG	0.325416	5.1:-19239713	None:intergenic
CTGGTGCTTGGACTGTCTGC+TGG	0.392114	5.1:+19239930	MS.gene000634:CDS
CCTACTTGGCCTCTGGTGCT+TGG	0.396214	5.1:+19239918	MS.gene000634:CDS
TAACTTTAAATATGAAAAGC+TGG	0.406564	5.1:+19239473	MS.gene000634:CDS
CGCGGCACAGCTACGGGAAT+AGG	0.408134	5.1:-19239657	None:intergenic
GACACGCCACTCTTGTTTCA+AGG	0.413036	5.1:-19239421	None:intergenic
GCCAAAGCAAAACAAGGTTC+TGG	0.414080	5.1:+19239825	MS.gene000634:CDS
GGTCCAATCTGCTTCCTACT+TGG	0.416973	5.1:+19239904	MS.gene000634:CDS
CTCTTACCGTCCTCTTCAAC+AGG	0.419316	5.1:+19239873	MS.gene000634:CDS
GCAAATTCTCAAGAGGAAAT+CGG	0.445460	5.1:+19239975	MS.gene000634:CDS
TCTGCTTCCTACTTGGCCTC+TGG	0.449798	5.1:+19239911	MS.gene000634:CDS
GCAGCAGTAGTAAAAGGAAA+TGG	0.452091	5.1:-19239954	None:intergenic
TCGGTACTGCTGCAACCAAC+AGG	0.460210	5.1:+19239622	MS.gene000634:CDS
GTTGTTGCTGCTGCCTCTGT+TGG	0.468674	5.1:+19239690	MS.gene000634:CDS
GGTTCTGGTGCGAACTCTCC+AGG	0.468743	5.1:+19239840	MS.gene000634:CDS
CAGCAGCAACAACATTTGTA+TGG	0.473033	5.1:-19239680	None:intergenic
TGAGATAAGCACCCCAGTTA+CGG	0.479656	5.1:-19239581	None:intergenic
GCAGACAGTCCAAGCACCAG+AGG	0.486586	5.1:-19239927	None:intergenic
TGTAACTGCTGAAGGTGTAC+TGG	0.490437	5.1:+19239719	MS.gene000634:CDS
TCCTCTTCAACAGGTAACTC+AGG	0.492293	5.1:+19239882	MS.gene000634:CDS
TGCAACCAACAGGTGGATAC+AGG	0.492385	5.1:+19239632	MS.gene000634:CDS
TGTATGGCGCGGCACAGCTA+CGG	0.503703	5.1:-19239664	None:intergenic
GTGTGGTGTGCTCGGACATA+CGG	0.504521	5.1:+19239512	MS.gene000634:CDS
CCAAGCACCAGAGGCCAAGT+AGG	0.508320	5.1:-19239918	None:intergenic
AACTTTAAATATGAAAAGCT+GGG	0.509761	5.1:+19239474	MS.gene000634:CDS
TAGGAACAAATGTTAGTCAT+GGG	0.515296	5.1:+19240090	MS.gene000634:CDS
ACATACGGACAAGGTGTGTC+CGG	0.515722	5.1:+19239527	MS.gene000634:CDS
ACCATCCTGTCATTGAAGCT+TGG	0.516139	5.1:-19239744	None:intergenic
GGTAAGAGATGTACCATGCC+TGG	0.518626	5.1:-19239858	None:intergenic
AGGCCAAGTAGGAAGCAGAT+TGG	0.522212	5.1:-19239907	None:intergenic
TGACGACGGTGTCCGTAACT+GGG	0.523857	5.1:+19239569	MS.gene000634:CDS
GAAGAAAATAAAGAGGATGC+TGG	0.533193	5.1:+19240007	MS.gene000634:CDS
TGGTTCCAAGCTTCAATGAC+AGG	0.533487	5.1:+19239739	MS.gene000634:CDS
GTATGGCGCGGCACAGCTAC+GGG	0.534441	5.1:-19239663	None:intergenic
GCTTTCAATTCAAACAGCTC+CGG	0.535106	5.1:-19239546	None:intergenic
TGTCACAGGTGTGGTGTGCT+CGG	0.535855	5.1:+19239504	MS.gene000634:CDS
ATAGGAACAAATGTTAGTCA+TGG	0.543713	5.1:+19240089	MS.gene000634:CDS
ATGAATTGTCACCATTCTGA+AGG	0.545818	5.1:-19240031	None:intergenic
CCCTGAGTTACCTGTTGAAG+AGG	0.550310	5.1:-19239883	None:intergenic
AAGCCTAATTTGAAACGTAT+CGG	0.565791	5.1:+19239603	MS.gene000634:CDS
TACTGCTGCAAATTCTCAAG+AGG	0.568886	5.1:+19239968	MS.gene000634:CDS
CTGAATTGAAGAAAATAAAG+AGG	0.569177	5.1:+19240000	MS.gene000634:CDS
ACACGCCACTCTTGTTTCAA+GGG	0.575839	5.1:-19239420	None:intergenic
CAAAAGTACCATTGTTAGCA+CGG	0.580700	5.1:-19239443	None:intergenic
TGGTGCGAACTCTCCAGGCA+TGG	0.581722	5.1:+19239845	MS.gene000634:CDS
AGGATGCTGGCCCTTCAGAA+TGG	0.591615	5.1:+19240020	MS.gene000634:CDS
AGGATCCTGTATCCACCTGT+TGG	0.607557	5.1:-19239637	None:intergenic
TCCAAGCTTCAATGACAGGA+TGG	0.614971	5.1:+19239743	MS.gene000634:CDS
TTTGCTGCTGATGAGGATGA+GGG	0.616001	5.1:+19240056	MS.gene000634:CDS
AGGAACAAATGTTAGTCATG+GGG	0.621613	5.1:+19240091	MS.gene000634:CDS
GGCCGAAATGTAACTGCTGA+AGG	0.622032	5.1:+19239711	MS.gene000634:CDS
GGAACAAATGTTAGTCATGG+GGG	0.626566	5.1:+19240092	MS.gene000634:CDS
TGGCGTGTCCGTGCTAACAA+TGG	0.633755	5.1:+19239435	MS.gene000634:CDS
GACGACGGTGTCCGTAACTG+GGG	0.635519	5.1:+19239570	MS.gene000634:CDS
TGAATTGTCACCATTCTGAA+GGG	0.638224	5.1:-19240030	None:intergenic
CCTCTTCAACAGGTAACTCA+GGG	0.640759	5.1:+19239883	MS.gene000634:CDS
GCAACAACATTTGTATGGCG+CGG	0.643692	5.1:-19239675	None:intergenic
GTACTGCTGCAACCAACAGG+TGG	0.653037	5.1:+19239625	MS.gene000634:CDS
CTGTTCCCTTGAAACAAGAG+TGG	0.655372	5.1:+19239415	MS.gene000634:CDS
TAGGCTGCCAAAGCAAAACA+AGG	0.657259	5.1:+19239819	MS.gene000634:intron
GAACAAATGTTAGTCATGGG+GGG	0.666834	5.1:+19240093	MS.gene000634:CDS
GAGTTACCTGTTGAAGAGGA+CGG	0.671052	5.1:-19239879	None:intergenic
TGTGCTCGGACATACGGACA+AGG	0.675926	5.1:+19239518	MS.gene000634:CDS
AGTTACATTTCGGCCAACAG+AGG	0.697810	5.1:-19239703	None:intergenic
TTTGAATTGAAAGCTGACGA+CGG	0.717213	5.1:+19239555	MS.gene000634:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AACTTTAAATATGAAAAGCT+GGG	+	chr5.1:19239474-19239493	MS.gene000634:CDS	20.0%
!!	TAACTTTAAATATGAAAAGC+TGG	+	chr5.1:19239473-19239492	MS.gene000634:CDS	20.0%
!	CTGAATTGAAGAAAATAAAG+AGG	+	chr5.1:19240000-19240019	MS.gene000634:CDS	25.0%
	ATAGGAACAAATGTTAGTCA+TGG	+	chr5.1:19240089-19240108	MS.gene000634:CDS	30.0%
	TAGGAACAAATGTTAGTCAT+GGG	+	chr5.1:19240090-19240109	MS.gene000634:CDS	30.0%
!	AAGCCTAATTTGAAACGTAT+CGG	+	chr5.1:19239603-19239622	MS.gene000634:CDS	30.0%
	AGGAACAAATGTTAGTCATG+GGG	+	chr5.1:19240091-19240110	MS.gene000634:CDS	35.0%
	ATCACTGCAATCAAACATGA+TGG	+	chr5.1:19239783-19239802	MS.gene000634:intron	35.0%
	ATGAATTGTCACCATTCTGA+AGG	-	chr5.1:19240034-19240053	None:intergenic	35.0%
	CATGTTTGATTGCAGTGATT+TGG	-	chr5.1:19239782-19239801	None:intergenic	35.0%
	GAAGAAAATAAAGAGGATGC+TGG	+	chr5.1:19240007-19240026	MS.gene000634:CDS	35.0%
	GAATTTGCAGCAGTAGTAAA+AGG	-	chr5.1:19239963-19239982	None:intergenic	35.0%
	GATGAGGGAAATACAGTAAT+AGG	+	chr5.1:19240071-19240090	MS.gene000634:CDS	35.0%
	GCAAATTCTCAAGAGGAAAT+CGG	+	chr5.1:19239975-19239994	MS.gene000634:CDS	35.0%
	TGAATTGTCACCATTCTGAA+GGG	-	chr5.1:19240033-19240052	None:intergenic	35.0%
	TTTGAATTGAAAGCTGACGA+CGG	+	chr5.1:19239555-19239574	MS.gene000634:CDS	35.0%
!	GTACCGATACGTTTCAAATT+AGG	-	chr5.1:19239609-19239628	None:intergenic	35.0%
!!	CAAAAGTACCATTGTTAGCA+CGG	-	chr5.1:19239446-19239465	None:intergenic	35.0%
	CACCTTCAGCAGTTACATTT+CGG	-	chr5.1:19239716-19239735	None:intergenic	40.0%
	CAGCAGCAACAACATTTGTA+TGG	-	chr5.1:19239683-19239702	None:intergenic	40.0%
	GAACAAATGTTAGTCATGGG+GGG	+	chr5.1:19240093-19240112	MS.gene000634:CDS	40.0%
	GCAGCAGTAGTAAAAGGAAA+TGG	-	chr5.1:19239957-19239976	None:intergenic	40.0%
	GCTTTCAATTCAAACAGCTC+CGG	-	chr5.1:19239549-19239568	None:intergenic	40.0%
	GGAACAAATGTTAGTCATGG+GGG	+	chr5.1:19240092-19240111	MS.gene000634:CDS	40.0%
	TACTGCTGCAAATTCTCAAG+AGG	+	chr5.1:19239968-19239987	MS.gene000634:CDS	40.0%
!	TTCATCTTTTGCTGCTGATG+AGG	+	chr5.1:19240049-19240068	MS.gene000634:CDS	40.0%
!!!	ACCAGAACCTTGTTTTGCTT+TGG	-	chr5.1:19239829-19239848	None:intergenic	40.0%
	ACCATCCTGTCATTGAAGCT+TGG	-	chr5.1:19239747-19239766	None:intergenic	45.0%
	AGTTACATTTCGGCCAACAG+AGG	-	chr5.1:19239706-19239725	None:intergenic	45.0%
	CCTCTTCAACAGGTAACTCA+GGG	+	chr5.1:19239883-19239902	MS.gene000634:CDS	45.0%
	CTGTTCCCTTGAAACAAGAG+TGG	+	chr5.1:19239415-19239434	MS.gene000634:CDS	45.0%
	GAGTTACCTGTTGAAGAGGA+CGG	-	chr5.1:19239882-19239901	None:intergenic	45.0%
	GCAACAACATTTGTATGGCG+CGG	-	chr5.1:19239678-19239697	None:intergenic	45.0%
	GCCAAAGCAAAACAAGGTTC+TGG	+	chr5.1:19239825-19239844	MS.gene000634:CDS	45.0%
	TAGGCTGCCAAAGCAAAACA+AGG	+	chr5.1:19239819-19239838	MS.gene000634:intron	45.0%
	TCCAAGCTTCAATGACAGGA+TGG	+	chr5.1:19239743-19239762	MS.gene000634:CDS	45.0%
	TCCTCTTCAACAGGTAACTC+AGG	+	chr5.1:19239882-19239901	MS.gene000634:CDS	45.0%
	TGAGATAAGCACCCCAGTTA+CGG	-	chr5.1:19239584-19239603	None:intergenic	45.0%
	TGGTTCCAAGCTTCAATGAC+AGG	+	chr5.1:19239739-19239758	MS.gene000634:CDS	45.0%
	TTTGCTGCTGATGAGGATGA+GGG	+	chr5.1:19240056-19240075	MS.gene000634:CDS	45.0%
!	ACACGCCACTCTTGTTTCAA+GGG	-	chr5.1:19239423-19239442	None:intergenic	45.0%
!	TGATGGTCTTGCTGCTCAAT+AGG	+	chr5.1:19239800-19239819	MS.gene000634:intron	45.0%
!	TGTAACTGCTGAAGGTGTAC+TGG	+	chr5.1:19239719-19239738	MS.gene000634:CDS	45.0%
!	TTTTGCTGCTGATGAGGATG+AGG	+	chr5.1:19240055-19240074	MS.gene000634:CDS	45.0%
!!!	AGCTGGGTGTTTTTTGTCAC+AGG	+	chr5.1:19239490-19239509	MS.gene000634:CDS	45.0%
!!!	GGTGTTTTTTGTCACAGGTG+TGG	+	chr5.1:19239495-19239514	MS.gene000634:CDS	45.0%
	ACATACGGACAAGGTGTGTC+CGG	+	chr5.1:19239527-19239546	MS.gene000634:CDS	50.0%
	AGGATCCTGTATCCACCTGT+TGG	-	chr5.1:19239640-19239659	None:intergenic	50.0%
	AGGCCAAGTAGGAAGCAGAT+TGG	-	chr5.1:19239910-19239929	None:intergenic	50.0%
	CCCTGAGTTACCTGTTGAAG+AGG	-	chr5.1:19239886-19239905	None:intergenic	50.0%
	CTCTTACCGTCCTCTTCAAC+AGG	+	chr5.1:19239873-19239892	MS.gene000634:CDS	50.0%
	GGCCGAAATGTAACTGCTGA+AGG	+	chr5.1:19239711-19239730	MS.gene000634:CDS	50.0%
	GGTAAGAGATGTACCATGCC+TGG	-	chr5.1:19239861-19239880	None:intergenic	50.0%
	GGTCCAATCTGCTTCCTACT+TGG	+	chr5.1:19239904-19239923	MS.gene000634:CDS	50.0%
	TGCAACCAACAGGTGGATAC+AGG	+	chr5.1:19239632-19239651	MS.gene000634:CDS	50.0%
!	GACACGCCACTCTTGTTTCA+AGG	-	chr5.1:19239424-19239443	None:intergenic	50.0%
	AGGATGCTGGCCCTTCAGAA+TGG	+	chr5.1:19240020-19240039	MS.gene000634:CDS	55.0%
	GTACTGCTGCAACCAACAGG+TGG	+	chr5.1:19239625-19239644	MS.gene000634:CDS	55.0%
	GTGTGGTGTGCTCGGACATA+CGG	+	chr5.1:19239512-19239531	MS.gene000634:CDS	55.0%
	GTTGTTGCTGCTGCCTCTGT+TGG	+	chr5.1:19239690-19239709	MS.gene000634:CDS	55.0%
	TCGGTACTGCTGCAACCAAC+AGG	+	chr5.1:19239622-19239641	MS.gene000634:CDS	55.0%
	TCTGCTTCCTACTTGGCCTC+TGG	+	chr5.1:19239911-19239930	MS.gene000634:CDS	55.0%
	TGACGACGGTGTCCGTAACT+GGG	+	chr5.1:19239569-19239588	MS.gene000634:CDS	55.0%
	TGGCGTGTCCGTGCTAACAA+TGG	+	chr5.1:19239435-19239454	MS.gene000634:CDS	55.0%
	TGTCACAGGTGTGGTGTGCT+CGG	+	chr5.1:19239504-19239523	MS.gene000634:CDS	55.0%
	TGTGCTCGGACATACGGACA+AGG	+	chr5.1:19239518-19239537	MS.gene000634:CDS	55.0%
	CCAAGCACCAGAGGCCAAGT+AGG	-	chr5.1:19239921-19239940	None:intergenic	60.0%
	CCTACTTGGCCTCTGGTGCT+TGG	+	chr5.1:19239918-19239937	MS.gene000634:CDS	60.0%
	CTGACGACGGTGTCCGTAAC+TGG	+	chr5.1:19239568-19239587	MS.gene000634:CDS	60.0%
	CTGGTGCTTGGACTGTCTGC+TGG	+	chr5.1:19239930-19239949	MS.gene000634:CDS	60.0%
	GACGACGGTGTCCGTAACTG+GGG	+	chr5.1:19239570-19239589	MS.gene000634:CDS	60.0%
	GCAGACAGTCCAAGCACCAG+AGG	-	chr5.1:19239930-19239949	None:intergenic	60.0%
	TGGTGCGAACTCTCCAGGCA+TGG	+	chr5.1:19239845-19239864	MS.gene000634:CDS	60.0%
	TGTATGGCGCGGCACAGCTA+CGG	-	chr5.1:19239667-19239686	None:intergenic	60.0%
!	GGTTCTGGTGCGAACTCTCC+AGG	+	chr5.1:19239840-19239859	MS.gene000634:CDS	60.0%
	CGCGGCACAGCTACGGGAAT+AGG	-	chr5.1:19239660-19239679	None:intergenic	65.0%
	GTATGGCGCGGCACAGCTAC+GGG	-	chr5.1:19239666-19239685	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.1	gene	19239387	19240127	19239387	ID=MS.gene000634
chr5.1	mRNA	19239387	19240127	19239387	ID=MS.gene000634.t1;Parent=MS.gene000634
chr5.1	exon	19239387	19239770	19239387	ID=MS.gene000634.t1.exon1;Parent=MS.gene000634.t1
chr5.1	CDS	19239387	19239770	19239387	ID=cds.MS.gene000634.t1;Parent=MS.gene000634.t1
chr5.1	exon	19239822	19240127	19239822	ID=MS.gene000634.t1.exon2;Parent=MS.gene000634.t1
chr5.1	CDS	19239822	19240127	19239822	ID=cds.MS.gene000634.t1;Parent=MS.gene000634.t1

Gene Sequence

>MS.gene000634

ATGCGTATCTGTGTTGCAATTGATGTGACTGTTCCCTTGAAACAAGAGTGGCGTGTCCGTGCTAACAATGGTACTTTTGTTACTGTTAACTTTAAATATGAAAAGCTGGGTGTTTTTTGTCACAGGTGTGGTGTGCTCGGACATACGGACAAGGTGTGTCCGGAGCTGTTTGAATTGAAAGCTGACGACGGTGTCCGTAACTGGGGTGCTTATCTCAAGCCTAATTTGAAACGTATCGGTACTGCTGCAACCAACAGGTGGATACAGGATCCTATTCCCGTAGCTGTGCCGCGCCATACAAATGTTGTTGCTGCTGCCTCTGTTGGCCGAAATGTAACTGCTGAAGGTGTACTGGTTCCAAGCTTCAATGACAGGATGGTAGCTGTACAGAACCAAATCACTGCAATCAAACATGATGGTCTTGCTGCTCAATAGGCTGCCAAAGCAAAACAAGGTTCTGGTGCGAACTCTCCAGGCATGGTACATCTCTTACCGTCCTCTTCAACAGGTAACTCAGGGTCCAATCTGCTTCCTACTTGGCCTCTGGTGCTTGGACTGTCTGCTGGTCCATTTCCTTTTACTACTGCTGCAAATTCTCAAGAGGAAATCGGCTCTGAATTGAAGAAAATAAAGAGGATGCTGGCCCTTCAGAATGGTGACAATTCATCTTTTGCTGCTGATGAGGATGAGGGAAATACAGTAATAGGAACAAATGTTAGTCATGGGGGGATGATGATATGA

Protein sequence

>MS.gene000634.t1

MRICVAIDVTVPLKQEWRVRANNGTFVTVNFKYEKLGVFCHRCGVLGHTDKVCPELFELKADDGVRNWGAYLKPNLKRIGTAATNRWIQDPIPVAVPRHTNVVAAASVGRNVTAEGVLVPSFNDRMVAAAKAKQGSGANSPGMVHLLPSSSTGNSGSNLLPTWPLVLGLSAGPFPFTTAANSQEEIGSELKKIKRMLALQNGDNSSFAADEDEGNTVIGTNVSHGGMMI