Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073582.t1 | RHN66148.1 | 69.7 | 284 | 39 | 1 | 317 | 553 | 11 | 294 | 8.80E-111 | 411 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073582.t1 | A0A396IN20 | 69.7 | 284 | 39 | 1 | 317 | 553 | 11 | 294 | 6.3e-111 | 411.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073582.t1 | MTR_3g053920 | 62.278 | 281 | 91 | 3 | 1 | 267 | 1 | 280 | 8.06e-111 | 332 |
| MS.gene073582.t1 | MTR_6g034215 | 53.521 | 284 | 67 | 3 | 317 | 553 | 11 | 276 | 7.23e-97 | 298 |
| MS.gene073582.t1 | MTR_2g018005 | 52.273 | 220 | 58 | 1 | 317 | 489 | 11 | 230 | 2.30e-72 | 231 |
| MS.gene073582.t1 | MTR_6g009010 | 44.444 | 252 | 109 | 2 | 317 | 537 | 12 | 263 | 1.57e-69 | 224 |
| MS.gene073582.t1 | MTR_2g061500 | 77.444 | 133 | 30 | 0 | 1 | 133 | 1 | 133 | 1.37e-68 | 218 |
| MS.gene073582.t1 | MTR_8g463110 | 67.114 | 149 | 49 | 0 | 405 | 553 | 124 | 272 | 1.04e-62 | 218 |
| MS.gene073582.t1 | MTR_8g463110 | 54.464 | 112 | 49 | 1 | 210 | 319 | 1 | 112 | 1.30e-20 | 96.3 |
| MS.gene073582.t1 | MTR_4g020630 | 47.907 | 215 | 57 | 2 | 386 | 553 | 2 | 208 | 3.14e-55 | 194 |
| MS.gene073582.t1 | MTR_1g100687 | 56.552 | 145 | 61 | 1 | 405 | 547 | 60 | 204 | 1.68e-51 | 176 |
| MS.gene073582.t1 | MTR_4g103530 | 48.969 | 194 | 74 | 3 | 55 | 235 | 1 | 182 | 1.99e-49 | 169 |
| MS.gene073582.t1 | MTR_3g044860 | 54.362 | 149 | 42 | 1 | 405 | 553 | 16 | 138 | 5.70e-49 | 172 |
| MS.gene073582.t1 | MTR_0042s0130 | 38.528 | 231 | 95 | 1 | 366 | 549 | 77 | 307 | 9.52e-45 | 161 |
| MS.gene073582.t1 | MTR_2g078880 | 42.211 | 199 | 53 | 2 | 335 | 486 | 6 | 189 | 6.35e-41 | 147 |
| MS.gene073582.t1 | MTR_1g051330 | 34.630 | 257 | 140 | 5 | 317 | 548 | 168 | 421 | 1.74e-37 | 147 |
| MS.gene073582.t1 | MTR_2g055450 | 35.556 | 225 | 83 | 3 | 371 | 548 | 99 | 308 | 3.45e-36 | 140 |
| MS.gene073582.t1 | MTR_6g460630 | 77.027 | 74 | 17 | 0 | 317 | 390 | 11 | 84 | 1.17e-33 | 126 |
| MS.gene073582.t1 | MTR_6g034715 | 68.675 | 83 | 26 | 0 | 405 | 487 | 52 | 134 | 1.55e-33 | 125 |
| MS.gene073582.t1 | MTR_8g470880 | 56.604 | 106 | 46 | 0 | 405 | 510 | 419 | 524 | 3.36e-33 | 133 |
| MS.gene073582.t1 | MTR_8g069750 | 81.159 | 69 | 13 | 0 | 336 | 404 | 2 | 70 | 2.78e-31 | 122 |
| MS.gene073582.t1 | MTR_0114s0080 | 61.905 | 84 | 32 | 0 | 405 | 488 | 47 | 130 | 7.05e-30 | 114 |
| MS.gene073582.t1 | MTR_2g043870 | 52.688 | 93 | 40 | 1 | 317 | 409 | 84 | 172 | 3.72e-27 | 108 |
| MS.gene073582.t1 | MTR_6g046587 | 37.500 | 184 | 61 | 4 | 380 | 512 | 102 | 282 | 2.96e-26 | 108 |
| MS.gene073582.t1 | MTR_7g011710 | 64.179 | 67 | 24 | 0 | 55 | 121 | 1 | 67 | 3.28e-25 | 102 |
| MS.gene073582.t1 | MTR_8g446890 | 48.649 | 111 | 33 | 2 | 405 | 515 | 33 | 119 | 7.28e-23 | 95.5 |
| MS.gene073582.t1 | MTR_4g044433 | 35.556 | 135 | 40 | 1 | 348 | 435 | 13 | 147 | 3.70e-21 | 90.5 |
| MS.gene073582.t1 | MTR_0112s0060 | 45.098 | 102 | 51 | 2 | 391 | 488 | 8 | 108 | 7.85e-20 | 85.9 |
| MS.gene073582.t1 | MTR_1g036710 | 35.374 | 147 | 82 | 3 | 259 | 398 | 121 | 261 | 7.72e-19 | 87.8 |
| MS.gene073582.t1 | MTR_0123s0050 | 62.000 | 50 | 19 | 0 | 434 | 483 | 1 | 50 | 2.29e-17 | 77.4 |
| MS.gene073582.t1 | MTR_0093s0080 | 51.190 | 84 | 19 | 2 | 405 | 488 | 63 | 124 | 4.85e-17 | 78.6 |
| MS.gene073582.t1 | MTR_1g062290 | 52.632 | 57 | 27 | 0 | 467 | 523 | 1 | 57 | 8.14e-14 | 70.1 |
| MS.gene073582.t1 | MTR_4g033730 | 52.055 | 73 | 27 | 2 | 382 | 454 | 74 | 138 | 1.97e-12 | 65.5 |
| MS.gene073582.t1 | MTR_1g036720 | 32.110 | 109 | 72 | 1 | 7 | 113 | 3 | 111 | 8.73e-12 | 62.4 |
| MS.gene073582.t1 | MTR_0044s0090 | 32.000 | 100 | 66 | 1 | 429 | 528 | 10 | 107 | 1.49e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 136 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCACTTGCTAATAATTTA+TGG | 0.125457 | 1.1:-34151412 | MS.gene073582:CDS |
| CGTAGAGCTGTTATTGATTC+AGG | 0.144428 | 1.1:-34151521 | MS.gene073582:CDS |
| CTGATGACGGTGTCCGTAAT+TGG | 0.248678 | 1.1:-34152590 | MS.gene073582:CDS |
| GTACCAAGCCTTTGTGTAAC+TGG | 0.268243 | 1.1:+34152552 | None:intergenic |
| AGGCCTCCTTGGCTTATAAA+TGG | 0.272197 | 1.1:-34151548 | MS.gene073582:CDS |
| AGTCAATGCTGCACGTGTTT+TGG | 0.284676 | 1.1:-34153011 | MS.gene073582:CDS |
| TCCGCACATAAAGATAATTT+AGG | 0.297190 | 1.1:+34151185 | None:intergenic |
| TGTTGCTGCTGAAGGGGATA+TGG | 0.297746 | 1.1:-34152106 | MS.gene073582:CDS |
| AGAACATAAGGCCGAGTTAT+AGG | 0.300389 | 1.1:+34151308 | None:intergenic |
| AGACATAAACTCGCTGAAAT+AGG | 0.304319 | 1.1:+34153111 | None:intergenic |
| CTCTGAACCATATTGACTTT+GGG | 0.306559 | 1.1:-34152910 | MS.gene073582:CDS |
| ACTGAGACACTCGAGGAAAA+TGG | 0.333153 | 1.1:-34152180 | MS.gene073582:CDS |
| ACCATATTGACTTTGGGTTC+AGG | 0.352522 | 1.1:-34152904 | MS.gene073582:intron |
| TTCAAGGATTGCAGCAGTTT+CGG | 0.352785 | 1.1:+34153180 | None:intergenic |
| ATCCTTGAACACTGCTTGAT+TGG | 0.353392 | 1.1:-34153166 | MS.gene073582:CDS |
| ATAACGATCAGACACAAATT+TGG | 0.355821 | 1.1:+34153054 | None:intergenic |
| ACCTGAACCCAAAGTCAATA+TGG | 0.359183 | 1.1:+34152903 | None:intergenic |
| CCTTCAGGTGCTGCTTCTGC+TGG | 0.367909 | 1.1:-34152468 | MS.gene073582:CDS |
| GGTGCAACATTTACAAGTAT+TGG | 0.369665 | 1.1:+34151329 | None:intergenic |
| CCGGATTGAAGTGCCGGATT+AGG | 0.374007 | 1.1:+34151895 | None:intergenic |
| CCTCTGAACCATATTGACTT+TGG | 0.374133 | 1.1:-34152911 | MS.gene073582:CDS |
| AGCTCCTTAAAACCCGATTC+AGG | 0.375581 | 1.1:+34151251 | None:intergenic |
| GCATCTAATTCAAACAATTC+AGG | 0.379243 | 1.1:+34152612 | None:intergenic |
| AAATGCTTGGCAACCTGAAT+CGG | 0.379693 | 1.1:-34151264 | MS.gene073582:CDS |
| CCGTTGAGATTGAGGTTTGA+AGG | 0.394549 | 1.1:+34153250 | None:intergenic |
| TCATATCAGCTCCCCAATTA+CGG | 0.394911 | 1.1:+34152577 | None:intergenic |
| GGCACACCATGAGGCCTCCT+TGG | 0.397254 | 1.1:-34151559 | MS.gene073582:CDS |
| ACTCGCTGAAATAGGCAAAC+TGG | 0.407892 | 1.1:+34153119 | None:intergenic |
| TGGTCGCGTCCTTGCTGATT+GGG | 0.410255 | 1.1:-34153146 | MS.gene073582:CDS |
| AGATGCGATCCATGGCAATA+TGG | 0.412574 | 1.1:+34152960 | None:intergenic |
| TGATGACGGTGTCCGTAATT+GGG | 0.416258 | 1.1:-34152589 | MS.gene073582:CDS |
| GTGATCGTAACCCGCTTGCC+TGG | 0.416512 | 1.1:+34153076 | None:intergenic |
| TGCGGCAAAGTGGCAGGAAT+AGG | 0.419167 | 1.1:+34152501 | None:intergenic |
| TACACTTGGTTTAAAAGTCT+TGG | 0.422119 | 1.1:-34151467 | MS.gene073582:CDS |
| GAAGAACTCCGTTATTTGCT+TGG | 0.423346 | 1.1:-34151828 | MS.gene073582:CDS |
| CCAGGCCGTCCCGTAGTGCT+TGG | 0.427654 | 1.1:-34152237 | MS.gene073582:CDS |
| TTGGTCGCGTCCTTGCTGAT+TGG | 0.429664 | 1.1:-34153147 | MS.gene073582:CDS |
| GTCGACCGCACCGGTAGAGC+CGG | 0.430434 | 1.1:-34151786 | MS.gene073582:CDS |
| CCGCAACAAAATCACCCTTC+AGG | 0.438811 | 1.1:-34152483 | MS.gene073582:CDS |
| ATTGGATAATGATCGGAAAC+AGG | 0.447611 | 1.1:+34151347 | None:intergenic |
| GCGGCAAAGTGGCAGGAATA+GGG | 0.450277 | 1.1:+34152502 | None:intergenic |
| GAAATTGTAAATACTACTCT+TGG | 0.457418 | 1.1:-34151690 | MS.gene073582:intron |
| AGGTTAGACCGTTGAGATTG+AGG | 0.458876 | 1.1:+34153242 | None:intergenic |
| GACCAATCAAGCAGTGTTCA+AGG | 0.459935 | 1.1:+34153164 | None:intergenic |
| AGGAGCTAGTTACTAACTCT+TGG | 0.460322 | 1.1:-34151235 | MS.gene073582:CDS |
| GTAGAGCTGTTATTGATTCA+GGG | 0.464064 | 1.1:-34151520 | MS.gene073582:CDS |
| GTGTACGGATACCCTTCAAC+CGG | 0.466594 | 1.1:+34151485 | None:intergenic |
| CTCCGCGTGCGGTGGAAGAA+AGG | 0.469250 | 1.1:-34151442 | MS.gene073582:CDS |
| TTGTTGCCTTCTTCTTCCAC+AGG | 0.471720 | 1.1:-34152282 | MS.gene073582:CDS |
| GCCATGGATCGCATCTCTCC+TGG | 0.471771 | 1.1:-34152953 | MS.gene073582:CDS |
| AATGCTTGGCAACCTGAATC+GGG | 0.472527 | 1.1:-34151263 | MS.gene073582:CDS |
| TTATCCGATGTCCCGGTTGA+AGG | 0.472998 | 1.1:-34151497 | MS.gene073582:CDS |
| TCGACCGCACCGGTAGAGCC+GGG | 0.483917 | 1.1:-34151785 | MS.gene073582:CDS |
| TTCAGGGTTATCCGATGTCC+CGG | 0.489946 | 1.1:-34151504 | MS.gene073582:CDS |
| ATGTCTCGTGCATGGAAGCC+AGG | 0.499859 | 1.1:-34153094 | MS.gene073582:CDS |
| CCAAGCACTACGGGACGGCC+TGG | 0.502483 | 1.1:+34152237 | None:intergenic |
| GAGTCTCACTTAAGAAAAGT+AGG | 0.506194 | 1.1:+34151871 | None:intergenic |
| CCGATCTTAAGTACCTAATC+CGG | 0.506611 | 1.1:-34151908 | MS.gene073582:CDS |
| TGTCACAGGTGCGGATTGAT+CGG | 0.508385 | 1.1:-34152654 | MS.gene073582:intron |
| TACAAGTATTGGATAATGAT+CGG | 0.509218 | 1.1:+34151340 | None:intergenic |
| CCTAATCCGGCACTTCAATC+CGG | 0.510108 | 1.1:-34151895 | MS.gene073582:CDS |
| AAATGGCGTTTAAGAACATA+AGG | 0.511915 | 1.1:+34151296 | None:intergenic |
| CCGGATTAGGTACTTAAGAT+CGG | 0.513688 | 1.1:+34151908 | None:intergenic |
| CGGATTAGGTACTTAAGATC+GGG | 0.516056 | 1.1:+34151909 | None:intergenic |
| TATCCGATGTCCCGGTTGAA+GGG | 0.518495 | 1.1:-34151496 | MS.gene073582:CDS |
| GGAGAAACTGTTGCTGCTGA+AGG | 0.519025 | 1.1:-34152114 | MS.gene073582:CDS |
| TCACTTAAGAAAAGTAGGTC+CGG | 0.519281 | 1.1:+34151876 | None:intergenic |
| TCAGCATCCAACTTGCTGCC+AGG | 0.519690 | 1.1:-34152255 | MS.gene073582:CDS |
| TTAAGATCGGGAATTGTGCT+CGG | 0.524680 | 1.1:+34151921 | None:intergenic |
| AAGAGTCTCGACAATAGCAT+TGG | 0.527715 | 1.1:+34151376 | None:intergenic |
| TCACTTGAGAATGGAGCAGC+AGG | 0.528382 | 1.1:+34152210 | None:intergenic |
| CATCGTAACCAAGCAAATAA+CGG | 0.531213 | 1.1:+34151820 | None:intergenic |
| TAAGATCGGGAATTGTGCTC+GGG | 0.531280 | 1.1:+34151922 | None:intergenic |
| GTAGGTCCGGATTGAAGTGC+CGG | 0.532703 | 1.1:+34151889 | None:intergenic |
| CCAGCAGAAGCAGCACCTGA+AGG | 0.533612 | 1.1:+34152468 | None:intergenic |
| TGCTGACCAAAATGCAATGT+TGG | 0.537927 | 1.1:-34152346 | MS.gene073582:CDS |
| TTGAAGGGTATCCGTACACT+TGG | 0.540065 | 1.1:-34151481 | MS.gene073582:CDS |
| GCAGGTAAACCAAGCACTAC+GGG | 0.541283 | 1.1:+34152228 | None:intergenic |
| TTGGATGCAGGTGAGAAAAG+AGG | 0.541392 | 1.1:-34151581 | MS.gene073582:intron |
| AGAGTCTCGACAATAGCATT+GGG | 0.544849 | 1.1:+34151377 | None:intergenic |
| TGCATGGAAGCCAGGCAAGC+GGG | 0.545161 | 1.1:-34153086 | MS.gene073582:CDS |
| GGGACGGCCTGGCAGCAAGT+TGG | 0.545222 | 1.1:+34152248 | None:intergenic |
| GTAGTGGAATCACTTGAGAA+TGG | 0.546669 | 1.1:+34152201 | None:intergenic |
| TCTTGGCACTCCGCGTGCGG+TGG | 0.547390 | 1.1:-34151450 | MS.gene073582:CDS |
| CAGCAGAAGCAGCACCTGAA+GGG | 0.547947 | 1.1:+34152469 | None:intergenic |
| GCGAGTTTATGTCTCGTGCA+TGG | 0.548238 | 1.1:-34153102 | MS.gene073582:CDS |
| CGGTCTAACCTTGTCTGAAG+AGG | 0.549059 | 1.1:-34153230 | MS.gene073582:CDS |
| GAGAAACTGTTGCTGCTGAA+GGG | 0.549548 | 1.1:-34152113 | MS.gene073582:CDS |
| ACCAGGAGAGATGCGATCCA+TGG | 0.550067 | 1.1:+34152952 | None:intergenic |
| GAAGTACCTGTGGAAGAAGA+AGG | 0.551152 | 1.1:+34152276 | None:intergenic |
| TGGATGCAGGTGAGAAAAGA+GGG | 0.551849 | 1.1:-34151580 | MS.gene073582:intron |
| ATACCCTTCAACCGGGACAT+CGG | 0.553155 | 1.1:+34151493 | None:intergenic |
| CGACCGCACCGGTAGAGCCG+GGG | 0.556397 | 1.1:-34151784 | MS.gene073582:CDS |
| GTACAGCTGTTACAAACCGT+TGG | 0.557165 | 1.1:-34152533 | MS.gene073582:CDS |
| CTCCTTCAGAAGCTTTGTCT+CGG | 0.557714 | 1.1:+34152445 | None:intergenic |
| GCTAGTTACTAACTCTTGGC+AGG | 0.559786 | 1.1:-34151231 | MS.gene073582:CDS |
| AGCAGGTAAACCAAGCACTA+CGG | 0.562534 | 1.1:+34152227 | None:intergenic |
| CGAAAGCCATTTATAAGCCA+AGG | 0.567843 | 1.1:+34151542 | None:intergenic |
| AAACCAGTTACACAAAGGCT+TGG | 0.570885 | 1.1:-34152555 | MS.gene073582:CDS |
| GGCCGAGACAAAGCTTCTGA+AGG | 0.576719 | 1.1:-34152447 | MS.gene073582:CDS |
| TTCCTCGAGTGTCTCAGTAG+TGG | 0.581801 | 1.1:+34152185 | None:intergenic |
| CGTATGCTGACTCTTCAGAA+TGG | 0.584912 | 1.1:-34152135 | MS.gene073582:CDS |
| ATGAAACTAGGAACGGCACC+AGG | 0.585390 | 1.1:+34152935 | None:intergenic |
| CCAAAATAAAGCTAAACCCC+CGG | 0.588471 | 1.1:+34151767 | None:intergenic |
| TGCTATTGTCGAGACTCTTG+TGG | 0.589676 | 1.1:-34151372 | MS.gene073582:CDS |
| TATAAGCCAAGGAGGCCTCA+TGG | 0.589810 | 1.1:+34151553 | None:intergenic |
| AAGTCTTGGCACTCCGCGTG+CGG | 0.592774 | 1.1:-34151453 | MS.gene073582:CDS |
| TGGTTCAGAGGAATGAAACT+AGG | 0.597964 | 1.1:+34152923 | None:intergenic |
| AGACAAAGCTTCTGAAGGAG+TGG | 0.598270 | 1.1:-34152442 | MS.gene073582:CDS |
| AACCTTTCTTCCACCGCACG+CGG | 0.598898 | 1.1:+34151440 | None:intergenic |
| ACCTAAATTATCTTTATGTG+CGG | 0.599437 | 1.1:-34151186 | MS.gene073582:CDS |
| GGTCTAACCTTGTCTGAAGA+GGG | 0.602109 | 1.1:-34153229 | MS.gene073582:CDS |
| TGAAAACTTCCATATTGCCA+TGG | 0.602431 | 1.1:-34152969 | MS.gene073582:CDS |
| GTGACTGAAATGCAAGCATA+CGG | 0.603828 | 1.1:+34152397 | None:intergenic |
| CCAAAGTCAATATGGTTCAG+AGG | 0.604763 | 1.1:+34152911 | None:intergenic |
| GACAAAGCTTCTGAAGGAGT+GGG | 0.605080 | 1.1:-34152441 | MS.gene073582:CDS |
| GATGACGGTGTCCGTAATTG+GGG | 0.606390 | 1.1:-34152588 | MS.gene073582:CDS |
| GACCGCACCGGTAGAGCCGG+GGG | 0.611655 | 1.1:-34151783 | MS.gene073582:CDS |
| TAAATGTTGCACCTATAACT+CGG | 0.613752 | 1.1:-34151319 | MS.gene073582:CDS |
| CACATAAAGATAATTTAGGT+AGG | 0.614615 | 1.1:+34151189 | None:intergenic |
| AGTTAAACCCTCTTCAGACA+AGG | 0.625083 | 1.1:+34153222 | None:intergenic |
| AGAAACTGTTGCTGCTGAAG+GGG | 0.629121 | 1.1:-34152112 | MS.gene073582:CDS |
| AGAAAAGAGGGCACACCATG+AGG | 0.635510 | 1.1:-34151568 | MS.gene073582:CDS |
| GTGCATGGAAGCCAGGCAAG+CGG | 0.639734 | 1.1:-34153087 | MS.gene073582:CDS |
| CCTTCAAACCTCAATCTCAA+CGG | 0.640995 | 1.1:-34153250 | MS.gene073582:CDS |
| GAATAGGGTCTTGTAACCAA+CGG | 0.648046 | 1.1:+34152517 | None:intergenic |
| GTTGGATGCTGAAGTACCTG+TGG | 0.655520 | 1.1:+34152266 | None:intergenic |
| GTAAACCAAGCACTACGGGA+CGG | 0.668431 | 1.1:+34152232 | None:intergenic |
| TTTGAATTAGATGCTGATGA+CGG | 0.670107 | 1.1:-34152603 | MS.gene073582:CDS |
| ACTGGATTTCCCAATCAGCA+AGG | 0.670643 | 1.1:+34153137 | None:intergenic |
| CAGAGGAATGAAACTAGGAA+CGG | 0.673417 | 1.1:+34152928 | None:intergenic |
| TGTACGGATACCCTTCAACC+GGG | 0.684627 | 1.1:+34151486 | None:intergenic |
| GTGCGGAAGATATTTCGACA+TGG | 0.688748 | 1.1:-34151169 | MS.gene073582:CDS |
| TTCCACTACTGAGACACTCG+AGG | 0.706174 | 1.1:-34152187 | MS.gene073582:CDS |
| AAGCCATTTATAAGCCAAGG+AGG | 0.716809 | 1.1:+34151545 | None:intergenic |
| ATATGAAACCAGTTACACAA+AGG | 0.719965 | 1.1:-34152560 | MS.gene073582:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTCAAATATGAAAAATT+GGG | - | chr1.1:34151714-34151733 | MS.gene073582:CDS | 10.0% |
| !! | CAATTTCAAATATGAAAAAT+TGG | - | chr1.1:34151713-34151732 | MS.gene073582:CDS | 15.0% |
| ! | ACCTAAATTATCTTTATGTG+CGG | - | chr1.1:34153212-34153231 | MS.gene073582:CDS | 25.0% |
| ! | CACATAAAGATAATTTAGGT+AGG | + | chr1.1:34153212-34153231 | None:intergenic | 25.0% |
| ! | GAAATTGTAAATACTACTCT+TGG | - | chr1.1:34152708-34152727 | MS.gene073582:intron | 25.0% |
| !! | GATATGGAAACTTTTGTAAT+AGG | - | chr1.1:34152308-34152327 | MS.gene073582:CDS | 25.0% |
| !! | GGAGTTCTTCAATTTTATTA+CGG | + | chr1.1:34152560-34152579 | None:intergenic | 25.0% |
| !!! | TACAAGTATTGGATAATGAT+CGG | + | chr1.1:34153061-34153080 | None:intergenic | 25.0% |
| !!! | TGTATTTTTGGTGACTTTAA+TGG | - | chr1.1:34152790-34152809 | MS.gene073582:intron | 25.0% |
| AAATGGCGTTTAAGAACATA+AGG | + | chr1.1:34153105-34153124 | None:intergenic | 30.0% | |
| AATGTAATTGTTGAACCCTT+AGG | - | chr1.1:34152364-34152383 | MS.gene073582:CDS | 30.0% | |
| AGGTGATGAACAAATTGTAA+CGG | - | chr1.1:34152384-34152403 | MS.gene073582:CDS | 30.0% | |
| ATAACGATCAGACACAAATT+TGG | + | chr1.1:34151347-34151366 | None:intergenic | 30.0% | |
| ATAGGTTCAAATGTTAGTCA+TGG | - | chr1.1:34152326-34152345 | MS.gene073582:CDS | 30.0% | |
| ATATGAAACCAGTTACACAA+AGG | - | chr1.1:34151838-34151857 | MS.gene073582:CDS | 30.0% | |
| GCATCTAATTCAAACAATTC+AGG | + | chr1.1:34151789-34151808 | None:intergenic | 30.0% | |
| TAAATACTACTCTTGGTACT+TGG | - | chr1.1:34152715-34152734 | MS.gene073582:intron | 30.0% | |
| TAAATGTTGCACCTATAACT+CGG | - | chr1.1:34153079-34153098 | MS.gene073582:CDS | 30.0% | |
| TACACTTGGTTTAAAAGTCT+TGG | - | chr1.1:34152931-34152950 | MS.gene073582:CDS | 30.0% | |
| TAGGTTCAAATGTTAGTCAT+GGG | - | chr1.1:34152327-34152346 | MS.gene073582:CDS | 30.0% | |
| TCCGCACATAAAGATAATTT+AGG | + | chr1.1:34153216-34153235 | None:intergenic | 30.0% | |
| TTAGGTACATTCAAAGCATA+TGG | - | chr1.1:34151576-34151595 | MS.gene073582:intron | 30.0% | |
| TTTGAATTAGATGCTGATGA+CGG | - | chr1.1:34151795-34151814 | MS.gene073582:CDS | 30.0% | |
| ! | AAGCATTTTCAAAGCGAAAA+TGG | + | chr1.1:34153122-34153141 | None:intergenic | 30.0% |
| ! | AATGCAATGTTGGCTAAAAA+AGG | - | chr1.1:34152062-34152081 | MS.gene073582:intron | 30.0% |
| ! | ACAATTTGTTCATCACCTAA+GGG | + | chr1.1:34152382-34152401 | None:intergenic | 30.0% |
| ! | AGACTTTTAAACCAAGTGTA+CGG | + | chr1.1:34152931-34152950 | None:intergenic | 30.0% |
| ! | ATGTTGGCTAAAAAAGGTAA+TGG | - | chr1.1:34152068-34152087 | MS.gene073582:intron | 30.0% |
| ! | GTGCACTTGCTAATAATTTA+TGG | - | chr1.1:34152986-34153005 | MS.gene073582:CDS | 30.0% |
| ! | TACAATTTGTTCATCACCTA+AGG | + | chr1.1:34152383-34152402 | None:intergenic | 30.0% |
| ! | TGGTGACTTTAATGGTATTT+TGG | - | chr1.1:34152798-34152817 | MS.gene073582:intron | 30.0% |
| ! | TTTTAGCCAACATTGCATTT+TGG | + | chr1.1:34152061-34152080 | None:intergenic | 30.0% |
| !! | TTTAATGGTATTTTGGATGC+AGG | - | chr1.1:34152805-34152824 | MS.gene073582:intron | 30.0% |
| !!! | ATTTTCGCTTTGAAAATGCT+TGG | - | chr1.1:34153121-34153140 | MS.gene073582:CDS | 30.0% |
| AAGTCACCAAAAATACACCA+AGG | + | chr1.1:34152787-34152806 | None:intergenic | 35.0% | |
| AGACATAAACTCGCTGAAAT+AGG | + | chr1.1:34151290-34151309 | None:intergenic | 35.0% | |
| AGGTTCAAATGTTAGTCATG+GGG | - | chr1.1:34152328-34152347 | MS.gene073582:CDS | 35.0% | |
| AGTCACCAAAAATACACCAA+GGG | + | chr1.1:34152786-34152805 | None:intergenic | 35.0% | |
| ATTGGATAATGATCGGAAAC+AGG | + | chr1.1:34153054-34153073 | None:intergenic | 35.0% | |
| CATCGTAACCAAGCAAATAA+CGG | + | chr1.1:34152581-34152600 | None:intergenic | 35.0% | |
| GAGTCTCACTTAAGAAAAGT+AGG | + | chr1.1:34152530-34152549 | None:intergenic | 35.0% | |
| GGATTTATCCAACCAAAAGT+AGG | - | chr1.1:34151534-34151553 | MS.gene073582:CDS | 35.0% | |
| GGTGCAACATTTACAAGTAT+TGG | + | chr1.1:34153072-34153091 | None:intergenic | 35.0% | |
| TCACTTAAGAAAAGTAGGTC+CGG | + | chr1.1:34152525-34152544 | None:intergenic | 35.0% | |
| TGAAAACTTCCATATTGCCA+TGG | - | chr1.1:34151429-34151448 | MS.gene073582:CDS | 35.0% | |
| TTTGGTTGGATAAATCCGAA+TGG | + | chr1.1:34151531-34151550 | None:intergenic | 35.0% | |
| ! | ATGGAAGTTTTCATACAACC+AGG | + | chr1.1:34151422-34151441 | None:intergenic | 35.0% |
| ! | CTTTTCTTAAGTGAGACTCT+AGG | - | chr1.1:34152531-34152550 | MS.gene073582:CDS | 35.0% |
| ! | TGGAAGTTTTCATACAACCA+GGG | + | chr1.1:34151421-34151440 | None:intergenic | 35.0% |
| !! | CTCTGAACCATATTGACTTT+GGG | - | chr1.1:34151488-34151507 | MS.gene073582:CDS | 35.0% |
| !! | GTAGAGCTGTTATTGATTCA+GGG | - | chr1.1:34152878-34152897 | MS.gene073582:intron | 35.0% |
| !!! | AATTGGGTGTTTTTTGTCAC+AGG | - | chr1.1:34151730-34151749 | MS.gene073582:CDS | 35.0% |
| AAACCAGTTACACAAAGGCT+TGG | - | chr1.1:34151843-34151862 | MS.gene073582:CDS | 40.0% | |
| AAATGCTTGGCAACCTGAAT+CGG | - | chr1.1:34153134-34153153 | MS.gene073582:CDS | 40.0% | |
| AAGAGTCTCGACAATAGCAT+TGG | + | chr1.1:34153025-34153044 | None:intergenic | 40.0% | |
| AAGCCATTTATAAGCCAAGG+AGG | + | chr1.1:34152856-34152875 | None:intergenic | 40.0% | |
| ACCTGAACCCAAAGTCAATA+TGG | + | chr1.1:34151498-34151517 | None:intergenic | 40.0% | |
| AGAACATAAGGCCGAGTTAT+AGG | + | chr1.1:34153093-34153112 | None:intergenic | 40.0% | |
| AGAGTCTCGACAATAGCATT+GGG | + | chr1.1:34153024-34153043 | None:intergenic | 40.0% | |
| AGGAGCTAGTTACTAACTCT+TGG | - | chr1.1:34153163-34153182 | MS.gene073582:CDS | 40.0% | |
| AGGAGCTATGGATAGTGTTT+CGG | + | chr1.1:34151605-34151624 | None:intergenic | 40.0% | |
| AGTTAAACCCTCTTCAGACA+AGG | + | chr1.1:34151179-34151198 | None:intergenic | 40.0% | |
| ATCCAACCAAAAGTAGGTCA+AGG | - | chr1.1:34151540-34151559 | MS.gene073582:CDS | 40.0% | |
| ATCCTTGAACACTGCTTGAT+TGG | - | chr1.1:34151232-34151251 | MS.gene073582:CDS | 40.0% | |
| CAAGGTATAGGAAGCTTCTT+AGG | - | chr1.1:34151558-34151577 | MS.gene073582:CDS | 40.0% | |
| CAGAGGAATGAAACTAGGAA+CGG | + | chr1.1:34151473-34151492 | None:intergenic | 40.0% | |
| CCAAAAGTAGGTCAAGGTAT+AGG | - | chr1.1:34151546-34151565 | MS.gene073582:CDS | 40.0% | |
| CCAAAATAAAGCTAAACCCC+CGG | + | chr1.1:34152634-34152653 | None:intergenic | 40.0% | |
| CCAAAGTCAATATGGTTCAG+AGG | + | chr1.1:34151490-34151509 | None:intergenic | 40.0% | |
| CCGATCTTAAGTACCTAATC+CGG | - | chr1.1:34152490-34152509 | MS.gene073582:CDS | 40.0% | |
| CCTTCAAACCTCAATCTCAA+CGG | - | chr1.1:34151148-34151167 | MS.gene073582:CDS | 40.0% | |
| CGAAAGCCATTTATAAGCCA+AGG | + | chr1.1:34152859-34152878 | None:intergenic | 40.0% | |
| GAAGAACTCCGTTATTTGCT+TGG | - | chr1.1:34152570-34152589 | MS.gene073582:CDS | 40.0% | |
| GATGAACAAATTGTAACGGC+AGG | - | chr1.1:34152388-34152407 | MS.gene073582:CDS | 40.0% | |
| GCTACTAGGCTCATTTATCT+AGG | + | chr1.1:34152432-34152451 | None:intergenic | 40.0% | |
| GGCTACTATGGTTATCCTAA+CGG | - | chr1.1:34152747-34152766 | MS.gene073582:intron | 40.0% | |
| GGTTCAAATGTTAGTCATGG+GGG | - | chr1.1:34152329-34152348 | MS.gene073582:CDS | 40.0% | |
| GTGACTGAAATGCAAGCATA+CGG | + | chr1.1:34152004-34152023 | None:intergenic | 40.0% | |
| GTTAGGATAACCATAGTAGC+CGG | + | chr1.1:34152748-34152767 | None:intergenic | 40.0% | |
| GTTCAAATGTTAGTCATGGG+GGG | - | chr1.1:34152330-34152349 | MS.gene073582:CDS | 40.0% | |
| TACTATGGTTATCCTAACGG+AGG | - | chr1.1:34152750-34152769 | MS.gene073582:intron | 40.0% | |
| TCATATCAGCTCCCCAATTA+CGG | + | chr1.1:34151824-34151843 | None:intergenic | 40.0% | |
| TGCTGACCAAAATGCAATGT+TGG | - | chr1.1:34152052-34152071 | MS.gene073582:intron | 40.0% | |
| TGGTTCAGAGGAATGAAACT+AGG | + | chr1.1:34151478-34151497 | None:intergenic | 40.0% | |
| TTAAGATCGGGAATTGTGCT+CGG | + | chr1.1:34152480-34152499 | None:intergenic | 40.0% | |
| TTCAAGGATTGCAGCAGTTT+CGG | + | chr1.1:34151221-34151240 | None:intergenic | 40.0% | |
| ! | CCGGATTAGGTACTTAAGAT+CGG | + | chr1.1:34152493-34152512 | None:intergenic | 40.0% |
| ! | CCTATACCTTGACCTACTTT+TGG | + | chr1.1:34151549-34151568 | None:intergenic | 40.0% |
| ! | CGGATTAGGTACTTAAGATC+GGG | + | chr1.1:34152492-34152511 | None:intergenic | 40.0% |
| ! | GAATAGGGTCTTGTAACCAA+CGG | + | chr1.1:34151884-34151903 | None:intergenic | 40.0% |
| ! | GTAGTGGAATCACTTGAGAA+TGG | + | chr1.1:34152200-34152219 | None:intergenic | 40.0% |
| !! | ACCATATTGACTTTGGGTTC+AGG | - | chr1.1:34151494-34151513 | MS.gene073582:CDS | 40.0% |
| !! | CCTCTGAACCATATTGACTT+TGG | - | chr1.1:34151487-34151506 | MS.gene073582:CDS | 40.0% |
| !! | CGTAGAGCTGTTATTGATTC+AGG | - | chr1.1:34152877-34152896 | MS.gene073582:intron | 40.0% |
| !! | GTAATGGTGTGCTTTTTGCT+TGG | - | chr1.1:34152084-34152103 | MS.gene073582:intron | 40.0% |
| !! | TACCTTGACCTACTTTTGGT+TGG | + | chr1.1:34151545-34151564 | None:intergenic | 40.0% |
| AATGCTTGGCAACCTGAATC+GGG | - | chr1.1:34153135-34153154 | MS.gene073582:CDS | 45.0% | |
| ACTCGCTGAAATAGGCAAAC+TGG | + | chr1.1:34151282-34151301 | None:intergenic | 45.0% | |
| ACTGAGACACTCGAGGAAAA+TGG | - | chr1.1:34152218-34152237 | MS.gene073582:CDS | 45.0% | |
| ACTGGATTTCCCAATCAGCA+AGG | + | chr1.1:34151264-34151283 | None:intergenic | 45.0% | |
| AGAAACTGTTGCTGCTGAAG+GGG | - | chr1.1:34152286-34152305 | MS.gene073582:CDS | 45.0% | |
| AGATGCGATCCATGGCAATA+TGG | + | chr1.1:34151441-34151460 | None:intergenic | 45.0% | |
| AGCAGGTAAACCAAGCACTA+CGG | + | chr1.1:34152174-34152193 | None:intergenic | 45.0% | |
| AGCTCCTTAAAACCCGATTC+AGG | + | chr1.1:34153150-34153169 | None:intergenic | 45.0% | |
| AGGCCTCCTTGGCTTATAAA+TGG | - | chr1.1:34152850-34152869 | MS.gene073582:intron | 45.0% | |
| AGGTTAGACCGTTGAGATTG+AGG | + | chr1.1:34151159-34151178 | None:intergenic | 45.0% | |
| ATAGCTCCTACATGCGTGTT+AGG | - | chr1.1:34151616-34151635 | MS.gene073582:intron | 45.0% | |
| CCGTTGAGATTGAGGTTTGA+AGG | + | chr1.1:34151151-34151170 | None:intergenic | 45.0% | |
| CTAGGCTCATTTATCTAGGC+AGG | + | chr1.1:34152428-34152447 | None:intergenic | 45.0% | |
| CTTGGTACTTGGAGACTTAC+CGG | - | chr1.1:34152726-34152745 | MS.gene073582:intron | 45.0% | |
| GACCAATCAAGCAGTGTTCA+AGG | + | chr1.1:34151237-34151256 | None:intergenic | 45.0% | |
| GAGAAACTGTTGCTGCTGAA+GGG | - | chr1.1:34152285-34152304 | MS.gene073582:CDS | 45.0% | |
| GATAAATGAGCCTAGTAGCG+TGG | - | chr1.1:34152433-34152452 | MS.gene073582:CDS | 45.0% | |
| GCTAGTTACTAACTCTTGGC+AGG | - | chr1.1:34153167-34153186 | MS.gene073582:CDS | 45.0% | |
| GGTCTAACCTTGTCTGAAGA+GGG | - | chr1.1:34151169-34151188 | MS.gene073582:CDS | 45.0% | |
| GTACAGCTGTTACAAACCGT+TGG | - | chr1.1:34151865-34151884 | MS.gene073582:CDS | 45.0% | |
| GTACCAAGCCTTTGTGTAAC+TGG | + | chr1.1:34151849-34151868 | None:intergenic | 45.0% | |
| GTGCGGAAGATATTTCGACA+TGG | - | chr1.1:34153229-34153248 | MS.gene073582:CDS | 45.0% | |
| TAACACGCATGTAGGAGCTA+TGG | + | chr1.1:34151617-34151636 | None:intergenic | 45.0% | |
| TAAGATCGGGAATTGTGCTC+GGG | + | chr1.1:34152479-34152498 | None:intergenic | 45.0% | |
| TAGCTCCTACATGCGTGTTA+GGG | - | chr1.1:34151617-34151636 | MS.gene073582:intron | 45.0% | |
| TGCTATTGTCGAGACTCTTG+TGG | - | chr1.1:34153026-34153045 | MS.gene073582:CDS | 45.0% | |
| TGGATGCAGGTGAGAAAAGA+GGG | - | chr1.1:34152818-34152837 | MS.gene073582:intron | 45.0% | |
| TTGGATGCAGGTGAGAAAAG+AGG | - | chr1.1:34152817-34152836 | MS.gene073582:intron | 45.0% | |
| TTGTTGCCTTCTTCTTCCAC+AGG | - | chr1.1:34152116-34152135 | MS.gene073582:CDS | 45.0% | |
| ! | AGACAAAGCTTCTGAAGGAG+TGG | - | chr1.1:34151956-34151975 | MS.gene073582:intron | 45.0% |
| ! | AGTCAATGCTGCACGTGTTT+TGG | - | chr1.1:34151387-34151406 | MS.gene073582:CDS | 45.0% |
| ! | CCTGAAGGGTGATTTTGTTG+CGG | + | chr1.1:34151918-34151937 | None:intergenic | 45.0% |
| ! | CTCCTTCAGAAGCTTTGTCT+CGG | + | chr1.1:34151956-34151975 | None:intergenic | 45.0% |
| ! | GAAGTACCTGTGGAAGAAGA+AGG | + | chr1.1:34152125-34152144 | None:intergenic | 45.0% |
| ! | GACAAAGCTTCTGAAGGAGT+GGG | - | chr1.1:34151957-34151976 | MS.gene073582:intron | 45.0% |
| ! | GCAACCTGAATCGGGTTTTA+AGG | - | chr1.1:34153143-34153162 | MS.gene073582:CDS | 45.0% |
| ! | GTGATTTTGTTGCGGCAAAG+TGG | + | chr1.1:34151910-34151929 | None:intergenic | 45.0% |
| ! | TGACTTTGGGTTCAGGTTCA+TGG | - | chr1.1:34151501-34151520 | MS.gene073582:CDS | 45.0% |
| !! | CAAAAGCACCGTTAGAAGCA+CGG | + | chr1.1:34151686-34151705 | None:intergenic | 45.0% |
| !! | CGTATGCTGACTCTTCAGAA+TGG | - | chr1.1:34152263-34152282 | MS.gene073582:CDS | 45.0% |
| !! | GAACGCCCTTGGTGTATTTT+TGG | - | chr1.1:34152778-34152797 | MS.gene073582:intron | 45.0% |
| !! | TGATGACGGTGTCCGTAATT+GGG | - | chr1.1:34151809-34151828 | MS.gene073582:CDS | 45.0% |
| !! | TTGAAGGGTATCCGTACACT+TGG | - | chr1.1:34152917-34152936 | MS.gene073582:CDS | 45.0% |
| !!! | ACACGCCACTCTTTTTTCAG+CGG | + | chr1.1:34151663-34151682 | None:intergenic | 45.0% |
| !!! | CCGGGGGTTTAGCTTTATTT+TGG | - | chr1.1:34152631-34152650 | MS.gene073582:CDS | 45.0% |
| !!! | GGTGTTTTTTGTCACAGGTG+CGG | - | chr1.1:34151735-34151754 | MS.gene073582:CDS | 45.0% |
| ATACCCTTCAACCGGGACAT+CGG | + | chr1.1:34152908-34152927 | None:intergenic | 50.0% | |
| ATGAAACTAGGAACGGCACC+AGG | + | chr1.1:34151466-34151485 | None:intergenic | 50.0% | |
| CAGGTTCATGGTCTGCCATT+CGG | - | chr1.1:34151513-34151532 | MS.gene073582:CDS | 50.0% | |
| CCGCAACAAAATCACCCTTC+AGG | - | chr1.1:34151915-34151934 | MS.gene073582:CDS | 50.0% | |
| CCTAATCCGGCACTTCAATC+CGG | - | chr1.1:34152503-34152522 | MS.gene073582:CDS | 50.0% | |
| CCTAGTAGCGTGGAATTGTC+GGG | - | chr1.1:34152443-34152462 | MS.gene073582:CDS | 50.0% | |
| CGGTCTAACCTTGTCTGAAG+AGG | - | chr1.1:34151168-34151187 | MS.gene073582:CDS | 50.0% | |
| CTAGTAGCGTGGAATTGTCG+GGG | - | chr1.1:34152444-34152463 | MS.gene073582:CDS | 50.0% | |
| CTGTCCCGCTGAAAAAAGAG+TGG | - | chr1.1:34151655-34151674 | MS.gene073582:intron | 50.0% | |
| GCAGGTAAACCAAGCACTAC+GGG | + | chr1.1:34152173-34152192 | None:intergenic | 50.0% | |
| GCCTAGTAGCGTGGAATTGT+CGG | - | chr1.1:34152442-34152461 | MS.gene073582:CDS | 50.0% | |
| GCGAGTTTATGTCTCGTGCA+TGG | - | chr1.1:34151296-34151315 | MS.gene073582:CDS | 50.0% | |
| GGAGAAACTGTTGCTGCTGA+AGG | - | chr1.1:34152284-34152303 | MS.gene073582:CDS | 50.0% | |
| GTAAACCAAGCACTACGGGA+CGG | + | chr1.1:34152169-34152188 | None:intergenic | 50.0% | |
| GTGTACGGATACCCTTCAAC+CGG | + | chr1.1:34152916-34152935 | None:intergenic | 50.0% | |
| TATAAGCCAAGGAGGCCTCA+TGG | + | chr1.1:34152848-34152867 | None:intergenic | 50.0% | |
| TATCCGATGTCCCGGTTGAA+GGG | - | chr1.1:34152902-34152921 | MS.gene073582:intron | 50.0% | |
| TCACTTGAGAATGGAGCAGC+AGG | + | chr1.1:34152191-34152210 | None:intergenic | 50.0% | |
| TGTACGGATACCCTTCAACC+GGG | + | chr1.1:34152915-34152934 | None:intergenic | 50.0% | |
| TGTTGCTGCTGAAGGGGATA+TGG | - | chr1.1:34152292-34152311 | MS.gene073582:CDS | 50.0% | |
| TTATCCGATGTCCCGGTTGA+AGG | - | chr1.1:34152901-34152920 | MS.gene073582:intron | 50.0% | |
| TTCAGGGTTATCCGATGTCC+CGG | - | chr1.1:34152894-34152913 | MS.gene073582:intron | 50.0% | |
| TTCCACTACTGAGACACTCG+AGG | - | chr1.1:34152211-34152230 | MS.gene073582:CDS | 50.0% | |
| TTCCTCGAGTGTCTCAGTAG+TGG | + | chr1.1:34152216-34152235 | None:intergenic | 50.0% | |
| ! | AGAAAAGAGGGCACACCATG+AGG | - | chr1.1:34152830-34152849 | MS.gene073582:intron | 50.0% |
| ! | GATGACGGTGTCCGTAATTG+GGG | - | chr1.1:34151810-34151829 | MS.gene073582:CDS | 50.0% |
| ! | GTTGGATGCTGAAGTACCTG+TGG | + | chr1.1:34152135-34152154 | None:intergenic | 50.0% |
| ! | TGGAGACTTACCGGCTACTA+TGG | - | chr1.1:34152735-34152754 | MS.gene073582:intron | 50.0% |
| ! | TGTCACAGGTGCGGATTGAT+CGG | - | chr1.1:34151744-34151763 | MS.gene073582:CDS | 50.0% |
| ! | TGTTTTCATGTCGACCGCAC+CGG | - | chr1.1:34152603-34152622 | MS.gene073582:CDS | 50.0% |
| ! | TTTTGTTGCGGCAAAGTGGC+AGG | + | chr1.1:34151906-34151925 | None:intergenic | 50.0% |
| !! | CTGATGACGGTGTCCGTAAT+TGG | - | chr1.1:34151808-34151827 | MS.gene073582:CDS | 50.0% |
| !!! | CACGCCACTCTTTTTTCAGC+GGG | + | chr1.1:34151662-34151681 | None:intergenic | 50.0% |
| AACCTTTCTTCCACCGCACG+CGG | + | chr1.1:34152961-34152980 | None:intergenic | 55.0% | |
| ACCAGGAGAGATGCGATCCA+TGG | + | chr1.1:34151449-34151468 | None:intergenic | 55.0% | |
| ATGTCTCGTGCATGGAAGCC+AGG | - | chr1.1:34151304-34151323 | MS.gene073582:CDS | 55.0% | |
| CAGCAGAAGCAGCACCTGAA+GGG | + | chr1.1:34151932-34151951 | None:intergenic | 55.0% | |
| CAGCGGGACAGTGACATCAA+TGG | + | chr1.1:34151646-34151665 | None:intergenic | 55.0% | |
| CCCGACAATTCCACGCTACT+AGG | + | chr1.1:34152446-34152465 | None:intergenic | 55.0% | |
| GCGGCAAAGTGGCAGGAATA+GGG | + | chr1.1:34151899-34151918 | None:intergenic | 55.0% | |
| GGCAACCCTAACACGCATGT+AGG | + | chr1.1:34151625-34151644 | None:intergenic | 55.0% | |
| GGCCGAGACAAAGCTTCTGA+AGG | - | chr1.1:34151951-34151970 | MS.gene073582:intron | 55.0% | |
| GTAGGTCCGGATTGAAGTGC+CGG | + | chr1.1:34152512-34152531 | None:intergenic | 55.0% | |
| TGCGGCAAAGTGGCAGGAAT+AGG | + | chr1.1:34151900-34151919 | None:intergenic | 55.0% | |
| TGGCGTGTCCGTGCTTCTAA+CGG | - | chr1.1:34151675-34151694 | MS.gene073582:intron | 55.0% | |
| TTGGTCGCGTCCTTGCTGAT+TGG | - | chr1.1:34151251-34151270 | MS.gene073582:CDS | 55.0% | |
| ! | AACGGCAGGCTCTGATGATC+AGG | - | chr1.1:34152402-34152421 | MS.gene073582:CDS | 55.0% |
| ! | TGGTCGCGTCCTTGCTGATT+GGG | - | chr1.1:34151252-34151271 | MS.gene073582:CDS | 55.0% |
| !! | CCGGATTGAAGTGCCGGATT+AGG | + | chr1.1:34152506-34152525 | None:intergenic | 55.0% |
| !! | GCTGCACGTGTTTTGGACGA+GGG | - | chr1.1:34151394-34151413 | MS.gene073582:CDS | 55.0% |
| !! | TCAGCATCCAACTTGCTGCC+AGG | - | chr1.1:34152143-34152162 | MS.gene073582:CDS | 55.0% |
| !! | TGCTGCACGTGTTTTGGACG+AGG | - | chr1.1:34151393-34151412 | MS.gene073582:CDS | 55.0% |
| AAGTCTTGGCACTCCGCGTG+CGG | - | chr1.1:34152945-34152964 | MS.gene073582:CDS | 60.0% | |
| AGCTAAACCCCCGGCTCTAC+CGG | + | chr1.1:34152625-34152644 | None:intergenic | 60.0% | |
| CCAGCAGAAGCAGCACCTGA+AGG | + | chr1.1:34151933-34151952 | None:intergenic | 60.0% | |
| GCCATGGATCGCATCTCTCC+TGG | - | chr1.1:34151445-34151464 | MS.gene073582:CDS | 60.0% | |
| GCGTGGAATTGTCGGGGTGT+AGG | - | chr1.1:34152450-34152469 | MS.gene073582:CDS | 60.0% | |
| GGCGTTCTACGACCTCCGTT+AGG | + | chr1.1:34152765-34152784 | None:intergenic | 60.0% | |
| GTGATCGTAACCCGCTTGCC+TGG | + | chr1.1:34151325-34151344 | None:intergenic | 60.0% | |
| GTGCATGGAAGCCAGGCAAG+CGG | - | chr1.1:34151311-34151330 | MS.gene073582:CDS | 60.0% | |
| TGCATGGAAGCCAGGCAAGC+GGG | - | chr1.1:34151312-34151331 | MS.gene073582:CDS | 60.0% | |
| !! | CCTTCAGGTGCTGCTTCTGC+TGG | - | chr1.1:34151930-34151949 | MS.gene073582:intron | 60.0% |
| !! | GTGTTTTGGACGAGGGTCCC+TGG | - | chr1.1:34151401-34151420 | MS.gene073582:CDS | 60.0% |
| CGGAGGTCGTAGAACGCCCT+TGG | - | chr1.1:34152767-34152786 | MS.gene073582:intron | 65.0% | |
| CTCCGCGTGCGGTGGAAGAA+AGG | - | chr1.1:34152956-34152975 | MS.gene073582:CDS | 65.0% | |
| GGCACACCATGAGGCCTCCT+TGG | - | chr1.1:34152839-34152858 | MS.gene073582:intron | 65.0% | |
| AACCCCCGGCTCTACCGGTG+CGG | + | chr1.1:34152620-34152639 | None:intergenic | 70.0% | |
| CCAAGCACTACGGGACGGCC+TGG | + | chr1.1:34152164-34152183 | None:intergenic | 70.0% | |
| CCAGGCCGTCCCGTAGTGCT+TGG | - | chr1.1:34152161-34152180 | MS.gene073582:CDS | 70.0% | |
| GGGACGGCCTGGCAGCAAGT+TGG | + | chr1.1:34152153-34152172 | None:intergenic | 70.0% | |
| TCTTGGCACTCCGCGTGCGG+TGG | - | chr1.1:34152948-34152967 | MS.gene073582:CDS | 70.0% | |
| ! | GTCGACCGCACCGGTAGAGC+CGG | - | chr1.1:34152612-34152631 | MS.gene073582:CDS | 70.0% |
| ! | TCGACCGCACCGGTAGAGCC+GGG | - | chr1.1:34152613-34152632 | MS.gene073582:CDS | 70.0% |
| ! | CGACCGCACCGGTAGAGCCG+GGG | - | chr1.1:34152614-34152633 | MS.gene073582:CDS | 75.0% |
| ! | GACCGCACCGGTAGAGCCGG+GGG | - | chr1.1:34152615-34152634 | MS.gene073582:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 34151142 | 34153278 | 34151142 | ID=MS.gene073582 |
| chr1.1 | mRNA | 34151142 | 34153278 | 34151142 | ID=MS.gene073582.t1;Parent=MS.gene073582 |
| chr1.1 | exon | 34152905 | 34153278 | 34152905 | ID=MS.gene073582.t1.exon1;Parent=MS.gene073582.t1 |
| chr1.1 | CDS | 34152905 | 34153278 | 34152905 | ID=cds.MS.gene073582.t1;Parent=MS.gene073582.t1 |
| chr1.1 | exon | 34152091 | 34152668 | 34152091 | ID=MS.gene073582.t1.exon2;Parent=MS.gene073582.t1 |
| chr1.1 | CDS | 34152091 | 34152668 | 34152091 | ID=cds.MS.gene073582.t1;Parent=MS.gene073582.t1 |
| chr1.1 | exon | 34151691 | 34151948 | 34151691 | ID=MS.gene073582.t1.exon3;Parent=MS.gene073582.t1 |
| chr1.1 | CDS | 34151691 | 34151948 | 34151691 | ID=cds.MS.gene073582.t1;Parent=MS.gene073582.t1 |
| chr1.1 | exon | 34151142 | 34151593 | 34151142 | ID=MS.gene073582.t1.exon4;Parent=MS.gene073582.t1 |
| chr1.1 | CDS | 34151142 | 34151593 | 34151142 | ID=cds.MS.gene073582.t1;Parent=MS.gene073582.t1 |
| Gene Sequence |
| Protein sequence |