Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05358.t1 | AES70414.1 | 57.8 | 346 | 80 | 3 | 1 | 346 | 1 | 280 | 1.80E-98 | 369.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05358.t1 | O04244 | 27.2 | 136 | 95 | 2 | 83 | 216 | 6 | 139 | 2.6e-10 | 68.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05358.t1 | G7J017 | 57.8 | 346 | 80 | 3 | 1 | 346 | 1 | 280 | 1.3e-98 | 369.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05358.t1 | MTR_3g053920 | 57.803 | 346 | 80 | 3 | 1 | 346 | 1 | 280 | 4.63e-126 | 366 |
MS.gene05358.t1 | MTR_2g061500 | 82.171 | 129 | 23 | 0 | 1 | 129 | 1 | 129 | 5.28e-75 | 231 |
MS.gene05358.t1 | MTR_4g103530 | 80.412 | 97 | 19 | 0 | 55 | 151 | 1 | 97 | 1.78e-52 | 174 |
MS.gene05358.t1 | MTR_4g103530 | 57.812 | 64 | 27 | 0 | 251 | 314 | 119 | 182 | 7.69e-16 | 76.3 |
MS.gene05358.t1 | MTR_7g011710 | 54.400 | 125 | 52 | 2 | 55 | 179 | 1 | 120 | 3.76e-37 | 133 |
MS.gene05358.t1 | MTR_6g033215 | 33.333 | 171 | 112 | 1 | 31 | 199 | 124 | 294 | 7.98e-32 | 123 |
MS.gene05358.t1 | MTR_0010s0370 | 35.955 | 178 | 102 | 4 | 8 | 177 | 4 | 177 | 5.15e-30 | 115 |
MS.gene05358.t1 | MTR_0010s0350 | 35.955 | 178 | 102 | 4 | 8 | 177 | 4 | 177 | 5.15e-30 | 115 |
MS.gene05358.t1 | MTR_8g463110 | 53.913 | 115 | 50 | 2 | 289 | 402 | 1 | 113 | 2.83e-20 | 94.0 |
MS.gene05358.t1 | MTR_1g036720 | 34.862 | 109 | 69 | 1 | 7 | 113 | 3 | 111 | 4.05e-15 | 71.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05358.t1 | AT2G17920 | 28.704 | 216 | 144 | 5 | 7 | 216 | 8 | 219 | 2.01e-18 | 85.9 |
MS.gene05358.t1 | AT2G41590 | 30.556 | 144 | 92 | 3 | 77 | 216 | 80 | 219 | 2.92e-16 | 80.5 |
MS.gene05358.t1 | AT3G57587 | 29.577 | 142 | 96 | 2 | 77 | 216 | 80 | 219 | 4.82e-16 | 79.7 |
MS.gene05358.t1 | AT5G36228 | 29.114 | 158 | 105 | 3 | 75 | 227 | 78 | 233 | 1.35e-15 | 78.2 |
MS.gene05358.t1 | AT3G31430 | 29.474 | 190 | 126 | 5 | 30 | 215 | 126 | 311 | 2.49e-15 | 77.4 |
MS.gene05358.t1 | AT2G13450 | 27.551 | 196 | 132 | 5 | 27 | 215 | 26 | 218 | 3.40e-15 | 77.4 |
MS.gene05358.t1 | AT5G25200 | 28.873 | 142 | 97 | 2 | 77 | 216 | 80 | 219 | 1.43e-14 | 75.1 |
MS.gene05358.t1 | AT2G02103 | 27.869 | 183 | 128 | 2 | 36 | 216 | 39 | 219 | 1.58e-14 | 75.5 |
MS.gene05358.t1 | AT5G18636 | 28.873 | 142 | 97 | 2 | 77 | 216 | 80 | 219 | 1.67e-14 | 75.1 |
MS.gene05358.t1 | AT3G47920 | 28.169 | 142 | 98 | 2 | 77 | 216 | 9 | 148 | 2.31e-14 | 73.9 |
MS.gene05358.t1 | AT4G02000 | 27.206 | 136 | 95 | 2 | 83 | 216 | 6 | 139 | 1.92e-12 | 68.2 |
Find 128 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCTAAACCATATCGATTTC+TGG | 0.153865 | 6.3:+75580822 | MS.gene05358:CDS |
CGGATGATGGCGTGCGAAAC+TGG | 0.210448 | 6.3:+75581143 | MS.gene05358:CDS |
AGCATCCTGTCATTGAAATT+TGG | 0.246745 | 6.3:-75581322 | None:intergenic |
AACCCGTTTGACTGGCTTCC+AGG | 0.249150 | 6.3:-75580648 | None:intergenic |
CGACATACGCTCGCTGAAAT+AGG | 0.271549 | 6.3:-75580621 | None:intergenic |
GCCTGTGGTGCTTGGCTTAC+CGG | 0.276985 | 6.3:+75581504 | MS.gene05358:CDS |
ATTTACTGCTGAAGGGGAAT+TGG | 0.296569 | 6.3:+75581636 | MS.gene05358:CDS |
AAGTGAAGAGACCGAGGTTT+AGG | 0.299912 | 6.3:-75582479 | None:intergenic |
CAGGCTCGGCTTCAAGGTTA+AGG | 0.308666 | 6.3:-75580532 | None:intergenic |
CCTTCAAACCTCAACCTTGC+TGG | 0.317012 | 6.3:+75580482 | MS.gene05358:CDS |
CCCAGAAATCGATATGGTTT+AGG | 0.321505 | 6.3:-75580823 | None:intergenic |
TCGAGGATGGCAGTGGGTTC+AGG | 0.326911 | 6.3:-75580551 | None:intergenic |
TCCTAGACCTTGACCTACTT+TGG | 0.341730 | 6.3:-75580882 | None:intergenic |
CCTAGACCTTGACCTACTTT+GGG | 0.343147 | 6.3:-75580881 | None:intergenic |
CCAGAAATCGATATGGTTTA+GGG | 0.345457 | 6.3:-75580822 | None:intergenic |
TTACCTTGCAACACAGTTGC+TGG | 0.349599 | 6.3:-75581238 | None:intergenic |
TCACACCCAGCATGAGTGAT+AGG | 0.358274 | 6.3:-75581532 | None:intergenic |
TCCAACCAGCCTGTGGTGCT+TGG | 0.358282 | 6.3:+75581496 | MS.gene05358:CDS |
CTTGTTTCAGTTCCATCATA+AGG | 0.363309 | 6.3:+75580700 | MS.gene05358:CDS |
TGCAACACAGTTGCTGGAAT+GGG | 0.368839 | 6.3:-75581232 | None:intergenic |
TGGGTTCAGGCTCGGCTTCA+AGG | 0.376282 | 6.3:-75580538 | None:intergenic |
TGATTGCAGTTATTTGAGTT+TGG | 0.383927 | 6.3:-75581351 | None:intergenic |
GAATTGGGAAATAATGTAAT+AGG | 0.385489 | 6.3:+75581652 | MS.gene05358:CDS |
CAAGTCCATGGTCTGCCGTT+TGG | 0.386489 | 6.3:+75580848 | MS.gene05358:CDS |
AATTGAGTTTCGGCCATCAT+AGG | 0.391128 | 6.3:-75580927 | None:intergenic |
TTTACTGCTGAAGGGGAATT+GGG | 0.394311 | 6.3:+75581637 | MS.gene05358:CDS |
TCGTATGATGATACTGATAT+TGG | 0.403165 | 6.3:+75581559 | MS.gene05358:CDS |
AGGAGAACATTGTAACCAAA+TGG | 0.403922 | 6.3:-75582459 | None:intergenic |
CTTGCACCCAGAAATCGATA+TGG | 0.406053 | 6.3:-75580829 | None:intergenic |
GCTCGCTGAAATAGGCAAAC+TGG | 0.409343 | 6.3:-75580613 | None:intergenic |
CAAAAGAGCCGTTGCTAGCT+CGG | 0.411344 | 6.3:-75581018 | None:intergenic |
GTGATCGTAACCCGTTTGAC+TGG | 0.414441 | 6.3:-75580656 | None:intergenic |
CCAGCAAGGTTGAGGTTTGA+AGG | 0.420107 | 6.3:-75580482 | None:intergenic |
ATCCTCGAAAACTGCCTGAT+TGG | 0.420785 | 6.3:+75580566 | MS.gene05358:CDS |
CGTCGGATCACTATCCCATT+TGG | 0.425972 | 6.3:+75582444 | MS.gene05358:CDS |
CCCTTCAGCAGTAAATGTAT+TGG | 0.428111 | 6.3:-75581629 | None:intergenic |
GCTTCTAACGCAACTGCTGC+AGG | 0.429101 | 6.3:+75581286 | MS.gene05358:CDS |
AGGCTCGGCTTCAAGGTTAA+GGG | 0.430018 | 6.3:-75580531 | None:intergenic |
GTGCCCACGCGTTGAGCAGC+AGG | 0.430129 | 6.3:-75581181 | None:intergenic |
TGTCACAGGTGTGGGCTGAT+TGG | 0.436701 | 6.3:+75581079 | MS.gene05358:CDS |
ACAAAGCTCGGGACGACACC+AGG | 0.441325 | 6.3:-75580797 | None:intergenic |
CCTAAACCATATCGATTTCT+GGG | 0.441473 | 6.3:+75580823 | MS.gene05358:CDS |
ATGCACTATGAATTGAGTTT+CGG | 0.442519 | 6.3:-75580937 | None:intergenic |
GCTGTCCCTATCACTCATGC+TGG | 0.458844 | 6.3:+75581526 | MS.gene05358:CDS |
GGTACAGGTACTGGCTTCTC+TGG | 0.459272 | 6.3:+75581418 | MS.gene05358:CDS |
TGGTTTAGGGGCACAAAGCT+CGG | 0.468910 | 6.3:-75580809 | None:intergenic |
GAGTTAAACCAGCAAGGTTG+AGG | 0.471146 | 6.3:-75580490 | None:intergenic |
GCGAGCGTATGTCGCGAGCC+TGG | 0.475977 | 6.3:+75580630 | MS.gene05358:CDS |
GGTTTAGGGGCACAAAGCTC+GGG | 0.484462 | 6.3:-75580808 | None:intergenic |
ATGAAACAAGGTACAGGTAC+TGG | 0.486453 | 6.3:+75581409 | MS.gene05358:CDS |
CCGACCTGCTGCTCAACGCG+TGG | 0.490453 | 6.3:+75581177 | MS.gene05358:CDS |
AGCCTGGAAGCCAGTCAAAC+GGG | 0.491071 | 6.3:+75580646 | MS.gene05358:CDS |
TTGCAACACAGTTGCTGGAA+TGG | 0.493144 | 6.3:-75581233 | None:intergenic |
AGGCTGGTTGGACAGCAAGC+TGG | 0.494235 | 6.3:-75581485 | None:intergenic |
GCTTTCGTTATGAGAATGCT+TGG | 0.495139 | 6.3:+75582510 | MS.gene05358:CDS |
ACCAATACATTTACTGCTGA+AGG | 0.495381 | 6.3:+75581628 | MS.gene05358:CDS |
TCATACGGACAAGGTGTGTC+CGG | 0.497073 | 6.3:+75581102 | MS.gene05358:CDS |
CAGCAAGGACACGACCAATC+AGG | 0.497675 | 6.3:-75580580 | None:intergenic |
GGAGAACATTGTAACCAAAT+GGG | 0.503208 | 6.3:-75582458 | None:intergenic |
CGGAATTGAAGAAGAGGAAA+CGG | 0.504798 | 6.3:+75581584 | MS.gene05358:CDS |
GTTGAGGTTTGAAGGATCCA+TGG | 0.507987 | 6.3:-75580474 | None:intergenic |
GATGGCAGTGGGTTCAGGCT+CGG | 0.509683 | 6.3:-75580546 | None:intergenic |
GGATGATGGCGTGCGAAACT+GGG | 0.512209 | 6.3:+75581144 | MS.gene05358:CDS |
GAGCCTGGAAGCCAGTCAAA+CGG | 0.514466 | 6.3:+75580645 | MS.gene05358:CDS |
GGTTTCATTCAACCCAAAGT+AGG | 0.516836 | 6.3:+75580869 | MS.gene05358:CDS |
GTGTCCGGAGCTGTATGAAT+TGG | 0.521204 | 6.3:+75581117 | MS.gene05358:CDS |
GCCGGTAAGCCAAGCACCAC+AGG | 0.522732 | 6.3:-75581505 | None:intergenic |
CAAGGTCTAGGAAGTTTCCT+TGG | 0.524197 | 6.3:+75580893 | MS.gene05358:CDS |
TGGTTTAACTCTGTCTGAGG+AGG | 0.532108 | 6.3:+75580502 | MS.gene05358:CDS |
GATTTCTGGGTGCAAGTCCA+TGG | 0.533388 | 6.3:+75580836 | MS.gene05358:CDS |
TATGAATTGGACTCGGATGA+TGG | 0.534830 | 6.3:+75581130 | MS.gene05358:CDS |
TTGGGTTGAATGAAACCAAA+CGG | 0.543919 | 6.3:-75580863 | None:intergenic |
GTGTGGGCTGATTGGTCATA+CGG | 0.544253 | 6.3:+75581087 | MS.gene05358:CDS |
GAGTGGCATCCACCTTATGA+TGG | 0.544576 | 6.3:-75580712 | None:intergenic |
CAATACATTTACTGCTGAAG+GGG | 0.545373 | 6.3:+75581630 | MS.gene05358:CDS |
CTGTCCCTATCACTCATGCT+GGG | 0.551325 | 6.3:+75581527 | MS.gene05358:CDS |
CTGTGCCAAATTTCAATGAC+AGG | 0.551379 | 6.3:+75581317 | MS.gene05358:CDS |
GCCAAGCACCACAGGCTGGT+TGG | 0.553708 | 6.3:-75581497 | None:intergenic |
GGAATTGAAGAAGAGGAAAC+GGG | 0.554608 | 6.3:+75581585 | MS.gene05358:CDS |
CGCGTTGAGCAGCAGGTCGG+AGG | 0.558724 | 6.3:-75581174 | None:intergenic |
CTTGCTGTCCAACCAGCCTG+TGG | 0.560301 | 6.3:+75581489 | MS.gene05358:CDS |
CCCAAAGTAGGTCAAGGTCT+AGG | 0.565295 | 6.3:+75580881 | MS.gene05358:CDS |
TGAAACCAAACGGCAGACCA+TGG | 0.572017 | 6.3:-75580853 | None:intergenic |
TGCTGGTTTAACTCTGTCTG+AGG | 0.573494 | 6.3:+75580499 | MS.gene05358:CDS |
GAGTCCAATTCATACAGCTC+CGG | 0.574729 | 6.3:-75581121 | None:intergenic |
CACACCCAGCATGAGTGATA+GGG | 0.579783 | 6.3:-75581531 | None:intergenic |
ATTCAACCCAAAGTAGGTCA+AGG | 0.579948 | 6.3:+75580875 | MS.gene05358:CDS |
TGATGATACTGATATTGGCT+CGG | 0.580065 | 6.3:+75581564 | MS.gene05358:CDS |
GGTTTAACTCTGTCTGAGGA+GGG | 0.582639 | 6.3:+75580503 | MS.gene05358:CDS |
GTAAGCCAAGCACCACAGGC+TGG | 0.583680 | 6.3:-75581501 | None:intergenic |
GGTACTCTTAAGTCCTATGA+TGG | 0.585551 | 6.3:+75580914 | MS.gene05358:CDS |
GCCACTCGTGTCCTCGATGA+CGG | 0.588982 | 6.3:+75580728 | MS.gene05358:CDS |
TTGAGGTTTGAAGGATCCAT+GGG | 0.589313 | 6.3:-75580473 | None:intergenic |
CAAGGTAACAACACTGCTAG+TGG | 0.589750 | 6.3:+75581253 | MS.gene05358:CDS |
CGACCTGCTGCTCAACGCGT+GGG | 0.595269 | 6.3:+75581178 | MS.gene05358:CDS |
CCAATACATTTACTGCTGAA+GGG | 0.596641 | 6.3:+75581629 | MS.gene05358:CDS |
GCACTGCTGCAACAAATCGT+TGG | 0.601202 | 6.3:+75581200 | MS.gene05358:CDS |
GCATGAGTGATAGGGACAGC+CGG | 0.602698 | 6.3:-75581523 | None:intergenic |
TTGGCTCGGAATTGAAGAAG+AGG | 0.607281 | 6.3:+75581578 | MS.gene05358:CDS |
AAATCTTGTAGCACCCGCGT+CGG | 0.608685 | 6.3:+75582427 | MS.gene05358:intron |
GTTTCAGTTCCATCATAAGG+TGG | 0.609100 | 6.3:+75580703 | MS.gene05358:CDS |
GCAACACAGTTGCTGGAATG+GGG | 0.610982 | 6.3:-75581231 | None:intergenic |
ATTGAAATTTGGCACAGCAG+CGG | 0.616691 | 6.3:-75581311 | None:intergenic |
TGGCGTGTCCGAGCTAGCAA+CGG | 0.623098 | 6.3:+75581010 | MS.gene05358:CDS |
GGAGCTGTATGAATTGGACT+CGG | 0.624429 | 6.3:+75581123 | MS.gene05358:CDS |
CTGGTTGGACAGCAAGCTGG+AGG | 0.624541 | 6.3:-75581482 | None:intergenic |
TACAATGTTCTCCTAAACCT+CGG | 0.624670 | 6.3:+75582468 | MS.gene05358:CDS |
GAATTGCATGTTGAGGAAGA+AGG | 0.624933 | 6.3:-75581457 | None:intergenic |
GATGATGGCGTGCGAAACTG+GGG | 0.626728 | 6.3:+75581145 | MS.gene05358:CDS |
ATTCCAGCAACTGTGTTGCA+AGG | 0.627570 | 6.3:+75581235 | MS.gene05358:CDS |
GCTGATTGGTCATACGGACA+AGG | 0.630704 | 6.3:+75581093 | MS.gene05358:CDS |
TGCATACATGCGTATCAAAG+TGG | 0.632998 | 6.3:+75580955 | MS.gene05358:CDS |
GGAGGTCGAATTGCATGTTG+AGG | 0.636992 | 6.3:-75581464 | None:intergenic |
GTGTCCTCGATGACGGTCCG+TGG | 0.638204 | 6.3:+75580735 | MS.gene05358:CDS |
ATGGGATAGTGATCCGACGC+GGG | 0.640778 | 6.3:-75582440 | None:intergenic |
CCACGCGTTGAGCAGCAGGT+CGG | 0.641610 | 6.3:-75581177 | None:intergenic |
GGTAACAACACTGCTAGTGG+TGG | 0.664668 | 6.3:+75581256 | MS.gene05358:CDS |
GCACTGGATCGTATTAACCC+TGG | 0.669762 | 6.3:+75580779 | MS.gene05358:CDS |
CAGACAGAGTTAAACCAGCA+AGG | 0.669821 | 6.3:-75580496 | None:intergenic |
ACTGGATTTCACGATCAGCA+AGG | 0.674576 | 6.3:-75580595 | None:intergenic |
CAGAAATCGATATGGTTTAG+GGG | 0.682672 | 6.3:-75580821 | None:intergenic |
ACAACCACGGACCGTCATCG+AGG | 0.684932 | 6.3:-75580739 | None:intergenic |
TGAAAATTATCATACAACCA+CGG | 0.686260 | 6.3:-75580752 | None:intergenic |
ACCGTCATCGAGGACACGAG+TGG | 0.687648 | 6.3:-75580729 | None:intergenic |
CATAGGACTTAAGAGTACCA+AGG | 0.692155 | 6.3:-75580910 | None:intergenic |
TTAACAAAGTGAAGAGACCG+AGG | 0.699402 | 6.3:-75582485 | None:intergenic |
CAAAGCTCGGGACGACACCA+GGG | 0.707217 | 6.3:-75580796 | None:intergenic |
AATGGGATAGTGATCCGACG+CGG | 0.766044 | 6.3:-75582441 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TCACTTAAGAATAAAATATC+CGG | - | chr6.3:75581870-75581889 | None:intergenic | 20.0% |
! | GAAATTATTGATACTGTACT+TGG | + | chr6.3:75582053-75582072 | MS.gene05358:intron | 25.0% |
! | GAATTGGGAAATAATGTAAT+AGG | + | chr6.3:75581652-75581671 | MS.gene05358:CDS | 25.0% |
! | GTTTGATGAAAATGTTGTAA+AGG | + | chr6.3:75581729-75581748 | MS.gene05358:intron | 25.0% |
! | TATTATGGTTATCCTAATAG+TGG | + | chr6.3:75582095-75582114 | MS.gene05358:intron | 25.0% |
! | TGAAAATTATCATACAACCA+CGG | - | chr6.3:75580755-75580774 | None:intergenic | 25.0% |
!! | ACAACATTTTCATCAAACAA+AGG | - | chr6.3:75581727-75581746 | None:intergenic | 25.0% |
!! | AGATTTTCCAAATATGCATT+AGG | - | chr6.3:75582413-75582432 | None:intergenic | 25.0% |
!! | TGATAATTTTCATATAGCAC+TGG | + | chr6.3:75580763-75580782 | MS.gene05358:CDS | 25.0% |
ATAAGTTATTAGCAAGAGCA+CGG | - | chr6.3:75582376-75582395 | None:intergenic | 30.0% | |
ATGCACTATGAATTGAGTTT+CGG | - | chr6.3:75580940-75580959 | None:intergenic | 30.0% | |
CAAAACTATTAGAGAGTTGA+CGG | - | chr6.3:75582148-75582167 | None:intergenic | 30.0% | |
CATGTTTCCTAATGCATATT+TGG | + | chr6.3:75582403-75582422 | MS.gene05358:intron | 30.0% | |
GATAAATGAGTTTAGTAGCT+TGG | + | chr6.3:75581778-75581797 | MS.gene05358:intron | 30.0% | |
GCTACTAAACTCATTTATCT+AGG | - | chr6.3:75581777-75581796 | None:intergenic | 30.0% | |
TCGTATGATGATACTGATAT+TGG | + | chr6.3:75581559-75581578 | MS.gene05358:CDS | 30.0% | |
TTCAAATCAGGAATTGTACT+CGG | - | chr6.3:75581825-75581844 | None:intergenic | 30.0% | |
! | CTGATTTGAAATACCTAATC+CGG | + | chr6.3:75581835-75581854 | MS.gene05358:intron | 30.0% |
! | TGATTGCAGTTATTTGAGTT+TGG | - | chr6.3:75581354-75581373 | None:intergenic | 30.0% |
!! | AACTCTCTAATAGTTTTGCA+GGG | + | chr6.3:75582150-75582169 | MS.gene05358:intron | 30.0% |
!!! | AATTAGGTGTTTTTTGTCAC+AGG | + | chr6.3:75581065-75581084 | MS.gene05358:CDS | 30.0% |
!!! | ACACGCCATTCTTTTTTTAA+CGG | - | chr6.3:75580998-75581017 | None:intergenic | 30.0% |
ACCAATACATTTACTGCTGA+AGG | + | chr6.3:75581628-75581647 | MS.gene05358:CDS | 35.0% | |
ACTGCTGCAAAAATGAAACA+AGG | + | chr6.3:75581397-75581416 | MS.gene05358:CDS | 35.0% | |
AGACTCTTAAACCAGGTAAA+TGG | - | chr6.3:75582320-75582339 | None:intergenic | 35.0% | |
AGCATCCTGTCATTGAAATT+TGG | - | chr6.3:75581325-75581344 | None:intergenic | 35.0% | |
AGGAGAACATTGTAACCAAA+TGG | - | chr6.3:75582462-75582481 | None:intergenic | 35.0% | |
CAATACATTTACTGCTGAAG+GGG | + | chr6.3:75581630-75581649 | MS.gene05358:CDS | 35.0% | |
CAGAAATCGATATGGTTTAG+GGG | - | chr6.3:75580824-75580843 | None:intergenic | 35.0% | |
CCAATACATTTACTGCTGAA+GGG | + | chr6.3:75581629-75581648 | MS.gene05358:CDS | 35.0% | |
CCAGAAATCGATATGGTTTA+GGG | - | chr6.3:75580825-75580844 | None:intergenic | 35.0% | |
CTAAACTCATTTATCTAGGC+AGG | - | chr6.3:75581773-75581792 | None:intergenic | 35.0% | |
CTTGTTTCAGTTCCATCATA+AGG | + | chr6.3:75580700-75580719 | MS.gene05358:CDS | 35.0% | |
GACTCTTAAACCAGGTAAAT+GGG | - | chr6.3:75582319-75582338 | None:intergenic | 35.0% | |
GATGAAAATGTTGTAAAGGC+AGG | + | chr6.3:75581733-75581752 | MS.gene05358:intron | 35.0% | |
GCAAAAATGAAACAAGGTAC+AGG | + | chr6.3:75581403-75581422 | MS.gene05358:CDS | 35.0% | |
GGAGAACATTGTAACCAAAT+GGG | - | chr6.3:75582461-75582480 | None:intergenic | 35.0% | |
GTGCTCTTGCTAATAACTTA+TGG | + | chr6.3:75582375-75582394 | MS.gene05358:intron | 35.0% | |
GTTTAGTAGCTTGGAATTGT+CGG | + | chr6.3:75581787-75581806 | MS.gene05358:intron | 35.0% | |
TACAATGTTCTCCTAAACCT+CGG | + | chr6.3:75582468-75582487 | MS.gene05358:CDS | 35.0% | |
TCAAATCAGGAATTGTACTC+GGG | - | chr6.3:75581824-75581843 | None:intergenic | 35.0% | |
TCTAGATGCCAATGAGAAAA+GGG | + | chr6.3:75582205-75582224 | MS.gene05358:intron | 35.0% | |
TTCTAGATGCCAATGAGAAA+AGG | + | chr6.3:75582204-75582223 | MS.gene05358:intron | 35.0% | |
TTTACCTGGTTTAAGAGTCT+TGG | + | chr6.3:75582320-75582339 | MS.gene05358:intron | 35.0% | |
TTTAGTAGCTTGGAATTGTC+GGG | + | chr6.3:75581788-75581807 | MS.gene05358:intron | 35.0% | |
! | CGGATTAGGTATTTCAAATC+AGG | - | chr6.3:75581837-75581856 | None:intergenic | 35.0% |
! | CTGTGCCGTTAAAAAAAGAA+TGG | + | chr6.3:75580990-75581009 | MS.gene05358:CDS | 35.0% |
! | TGATGATACTGATATTGGCT+CGG | + | chr6.3:75581564-75581583 | MS.gene05358:CDS | 35.0% |
!! | ATAGGCACTGATGTTAGTAT+TGG | + | chr6.3:75581670-75581689 | MS.gene05358:intron | 35.0% |
!! | CAACTCTCTAATAGTTTTGC+AGG | + | chr6.3:75582149-75582168 | MS.gene05358:intron | 35.0% |
!! | CCTAAACCATATCGATTTCT+GGG | + | chr6.3:75580823-75580842 | MS.gene05358:CDS | 35.0% |
!! | TAGGCACTGATGTTAGTATT+GGG | + | chr6.3:75581671-75581690 | MS.gene05358:intron | 35.0% |
!! | TTGGGTTGAATGAAACCAAA+CGG | - | chr6.3:75580866-75580885 | None:intergenic | 35.0% |
AAATATCCGGATTGAAGTGC+CGG | - | chr6.3:75581857-75581876 | None:intergenic | 40.0% | |
AAATCTCCCAAAATGCACCA+CGG | - | chr6.3:75582176-75582195 | None:intergenic | 40.0% | |
AACTATTAGAGAGTTGACGG+AGG | - | chr6.3:75582145-75582164 | None:intergenic | 40.0% | |
AATTGAGTTTCGGCCATCAT+AGG | - | chr6.3:75580930-75580949 | None:intergenic | 40.0% | |
AGGTCTCCATGGCTTATTAA+TGG | + | chr6.3:75582239-75582258 | MS.gene05358:intron | 40.0% | |
ATGAAACAAGGTACAGGTAC+TGG | + | chr6.3:75581409-75581428 | MS.gene05358:CDS | 40.0% | |
ATTCAACCCAAAGTAGGTCA+AGG | + | chr6.3:75580875-75580894 | MS.gene05358:CDS | 40.0% | |
ATTGAAATTTGGCACAGCAG+CGG | - | chr6.3:75581314-75581333 | None:intergenic | 40.0% | |
ATTTACTGCTGAAGGGGAAT+TGG | + | chr6.3:75581636-75581655 | MS.gene05358:CDS | 40.0% | |
CCCAGAAATCGATATGGTTT+AGG | - | chr6.3:75580826-75580845 | None:intergenic | 40.0% | |
CCCTTCAGCAGTAAATGTAT+TGG | - | chr6.3:75581632-75581651 | None:intergenic | 40.0% | |
CGAAAGCCATTAATAAGCCA+TGG | - | chr6.3:75582248-75582267 | None:intergenic | 40.0% | |
CGGAATTGAAGAAGAGGAAA+CGG | + | chr6.3:75581584-75581603 | MS.gene05358:CDS | 40.0% | |
CTAACCTTTCTTCGATAGCA+CGG | - | chr6.3:75582352-75582371 | None:intergenic | 40.0% | |
CTAGATGCCAATGAGAAAAG+GGG | + | chr6.3:75582206-75582225 | MS.gene05358:intron | 40.0% | |
CTGTGCCAAATTTCAATGAC+AGG | + | chr6.3:75581317-75581336 | MS.gene05358:CDS | 40.0% | |
GAATTGCATGTTGAGGAAGA+AGG | - | chr6.3:75581460-75581479 | None:intergenic | 40.0% | |
GCTTTCGTTATGAGAATGCT+TGG | + | chr6.3:75582510-75582529 | MS.gene05358:CDS | 40.0% | |
GGAATTGAAGAAGAGGAAAC+GGG | + | chr6.3:75581585-75581604 | MS.gene05358:CDS | 40.0% | |
GGTACTCTTAAGTCCTATGA+TGG | + | chr6.3:75580914-75580933 | MS.gene05358:CDS | 40.0% | |
GGTTTCATTCAACCCAAAGT+AGG | + | chr6.3:75580869-75580888 | MS.gene05358:CDS | 40.0% | |
GTAAATGGGTACCCTTCAAA+CGG | - | chr6.3:75582305-75582324 | None:intergenic | 40.0% | |
GTTTCAGTTCCATCATAAGG+TGG | + | chr6.3:75580703-75580722 | MS.gene05358:CDS | 40.0% | |
TAACCTTTCTTCGATAGCAC+GGG | - | chr6.3:75582351-75582370 | None:intergenic | 40.0% | |
TAGATGCCAATGAGAAAAGG+GGG | + | chr6.3:75582207-75582226 | MS.gene05358:intron | 40.0% | |
TATGAATTGGACTCGGATGA+TGG | + | chr6.3:75581130-75581149 | MS.gene05358:CDS | 40.0% | |
TGCATACATGCGTATCAAAG+TGG | + | chr6.3:75580955-75580974 | MS.gene05358:CDS | 40.0% | |
TGTCTGATGTTCCGTTTGAA+GGG | + | chr6.3:75582291-75582310 | MS.gene05358:intron | 40.0% | |
TTAACAAAGTGAAGAGACCG+AGG | - | chr6.3:75582488-75582507 | None:intergenic | 40.0% | |
TTAGTAGCTTGGAATTGTCG+GGG | + | chr6.3:75581789-75581808 | MS.gene05358:intron | 40.0% | |
TTGATACTGTACTTGGTCCT+TGG | + | chr6.3:75582060-75582079 | MS.gene05358:intron | 40.0% | |
TTGTCTGATGTTCCGTTTGA+AGG | + | chr6.3:75582290-75582309 | MS.gene05358:intron | 40.0% | |
TTTACTGCTGAAGGGGAATT+GGG | + | chr6.3:75581637-75581656 | MS.gene05358:CDS | 40.0% | |
! | CGACAAACTGTTCTAGATTC+TGG | + | chr6.3:75582266-75582285 | MS.gene05358:intron | 40.0% |
!! | AGGCACTGATGTTAGTATTG+GGG | + | chr6.3:75581672-75581691 | MS.gene05358:intron | 40.0% |
!! | CATAGGACTTAAGAGTACCA+AGG | - | chr6.3:75580913-75580932 | None:intergenic | 40.0% |
!! | CCCTAAACCATATCGATTTC+TGG | + | chr6.3:75580822-75580841 | MS.gene05358:CDS | 40.0% |
!!! | GTGTTTTTTGTCACAGGTGT+GGG | + | chr6.3:75581071-75581090 | MS.gene05358:CDS | 40.0% |
AACCTTTCTTCGATAGCACG+GGG | - | chr6.3:75582350-75582369 | None:intergenic | 45.0% | |
AAGTGAAGAGACCGAGGTTT+AGG | - | chr6.3:75582482-75582501 | None:intergenic | 45.0% | |
ACTGGATTTCACGATCAGCA+AGG | - | chr6.3:75580598-75580617 | None:intergenic | 45.0% | |
ATCCTCGAAAACTGCCTGAT+TGG | + | chr6.3:75580566-75580585 | MS.gene05358:CDS | 45.0% | |
ATTCCAGCAACTGTGTTGCA+AGG | + | chr6.3:75581235-75581254 | MS.gene05358:CDS | 45.0% | |
CAAGGTAACAACACTGCTAG+TGG | + | chr6.3:75581253-75581272 | MS.gene05358:CDS | 45.0% | |
CAAGGTCTAGGAAGTTTCCT+TGG | + | chr6.3:75580893-75580912 | MS.gene05358:CDS | 45.0% | |
CAGACAGAGTTAAACCAGCA+AGG | - | chr6.3:75580499-75580518 | None:intergenic | 45.0% | |
CCTAGACCTTGACCTACTTT+GGG | - | chr6.3:75580884-75580903 | None:intergenic | 45.0% | |
CTTGCACCCAGAAATCGATA+TGG | - | chr6.3:75580832-75580851 | None:intergenic | 45.0% | |
GAAGAGCTTCGTTGTTTGCT+TGG | + | chr6.3:75581915-75581934 | MS.gene05358:intron | 45.0% | |
GAGTCCAATTCATACAGCTC+CGG | - | chr6.3:75581124-75581143 | None:intergenic | 45.0% | |
GAGTTAAACCAGCAAGGTTG+AGG | - | chr6.3:75580493-75580512 | None:intergenic | 45.0% | |
GCAGTTCGTCTACCACTATT+AGG | - | chr6.3:75582110-75582129 | None:intergenic | 45.0% | |
GGAGCTGTATGAATTGGACT+CGG | + | chr6.3:75581123-75581142 | MS.gene05358:CDS | 45.0% | |
GGTTTAACTCTGTCTGAGGA+GGG | + | chr6.3:75580503-75580522 | MS.gene05358:CDS | 45.0% | |
TAATAACCAGTGACTCGCCA+AGG | - | chr6.3:75582080-75582099 | None:intergenic | 45.0% | |
TCCTAGACCTTGACCTACTT+TGG | - | chr6.3:75580885-75580904 | None:intergenic | 45.0% | |
TGCAACACAGTTGCTGGAAT+GGG | - | chr6.3:75581235-75581254 | None:intergenic | 45.0% | |
TGGTTTAACTCTGTCTGAGG+AGG | + | chr6.3:75580502-75580521 | MS.gene05358:CDS | 45.0% | |
TGTGCCAAGACTCTTAAACC+AGG | - | chr6.3:75582327-75582346 | None:intergenic | 45.0% | |
TTACCTTGCAACACAGTTGC+TGG | - | chr6.3:75581241-75581260 | None:intergenic | 45.0% | |
TTGCAACACAGTTGCTGGAA+TGG | - | chr6.3:75581236-75581255 | None:intergenic | 45.0% | |
! | CACTGATGTTAGTATTGGGG+GGG | + | chr6.3:75581675-75581694 | MS.gene05358:intron | 45.0% |
! | GCACTGATGTTAGTATTGGG+GGG | + | chr6.3:75581674-75581693 | MS.gene05358:intron | 45.0% |
! | TGGCGAGTCACTGGTTATTA+TGG | + | chr6.3:75582080-75582099 | MS.gene05358:intron | 45.0% |
!! | AATCAGGCAGTTTTCGAGGA+TGG | - | chr6.3:75580567-75580586 | None:intergenic | 45.0% |
!! | GGCACTGATGTTAGTATTGG+GGG | + | chr6.3:75581673-75581692 | MS.gene05358:intron | 45.0% |
!! | TGCTGGTTTAACTCTGTCTG+AGG | + | chr6.3:75580499-75580518 | MS.gene05358:CDS | 45.0% |
!! | TTGAAGGGTACCCATTTACC+TGG | + | chr6.3:75582306-75582325 | MS.gene05358:intron | 45.0% |
!! | TTGGCTCGGAATTGAAGAAG+AGG | + | chr6.3:75581578-75581597 | MS.gene05358:CDS | 45.0% |
!!! | GGTGTTTTTTGTCACAGGTG+TGG | + | chr6.3:75581070-75581089 | MS.gene05358:CDS | 45.0% |
!!! | AATTTTAAATATGAAAAATT+AGG | + | chr6.3:75581049-75581068 | MS.gene05358:CDS | 5.0% |
AAATCTTGTAGCACCCGCGT+CGG | + | chr6.3:75582427-75582446 | MS.gene05358:intron | 50.0% | |
AATGGGATAGTGATCCGACG+CGG | - | chr6.3:75582444-75582463 | None:intergenic | 50.0% | |
AGGCTCGGCTTCAAGGTTAA+GGG | - | chr6.3:75580534-75580553 | None:intergenic | 50.0% | |
CAAAAGAGCCGTTGCTAGCT+CGG | - | chr6.3:75581021-75581040 | None:intergenic | 50.0% | |
CACACCCAGCATGAGTGATA+GGG | - | chr6.3:75581534-75581553 | None:intergenic | 50.0% | |
CCAGCAAGGTTGAGGTTTGA+AGG | - | chr6.3:75580485-75580504 | None:intergenic | 50.0% | |
CCCAAAGTAGGTCAAGGTCT+AGG | + | chr6.3:75580881-75580900 | MS.gene05358:CDS | 50.0% | |
CCTAATCCGGCACTTCAATC+CGG | + | chr6.3:75581848-75581867 | MS.gene05358:intron | 50.0% | |
CCTTCAAACCTCAACCTTGC+TGG | + | chr6.3:75580482-75580501 | MS.gene05358:CDS | 50.0% | |
CGACATACGCTCGCTGAAAT+AGG | - | chr6.3:75580624-75580643 | None:intergenic | 50.0% | |
CGTCGGATCACTATCCCATT+TGG | + | chr6.3:75582444-75582463 | MS.gene05358:CDS | 50.0% | |
CTGTCCCTATCACTCATGCT+GGG | + | chr6.3:75581527-75581546 | MS.gene05358:CDS | 50.0% | |
GAGTGGCATCCACCTTATGA+TGG | - | chr6.3:75580715-75580734 | None:intergenic | 50.0% | |
GCAACACAGTTGCTGGAATG+GGG | - | chr6.3:75581234-75581253 | None:intergenic | 50.0% | |
GCACTGCTGCAACAAATCGT+TGG | + | chr6.3:75581200-75581219 | MS.gene05358:CDS | 50.0% | |
GCACTGGATCGTATTAACCC+TGG | + | chr6.3:75580779-75580798 | MS.gene05358:CDS | 50.0% | |
GCTCGCTGAAATAGGCAAAC+TGG | - | chr6.3:75580616-75580635 | None:intergenic | 50.0% | |
GCTTGGAATTGTCGGGGTAT+AGG | + | chr6.3:75581795-75581814 | MS.gene05358:intron | 50.0% | |
GGAGGTCGAATTGCATGTTG+AGG | - | chr6.3:75581467-75581486 | None:intergenic | 50.0% | |
GGTAACAACACTGCTAGTGG+TGG | + | chr6.3:75581256-75581275 | MS.gene05358:CDS | 50.0% | |
GTGATCGTAACCCGTTTGAC+TGG | - | chr6.3:75580659-75580678 | None:intergenic | 50.0% | |
GTGTCCGGAGCTGTATGAAT+TGG | + | chr6.3:75581117-75581136 | MS.gene05358:CDS | 50.0% | |
TCACACCCAGCATGAGTGAT+AGG | - | chr6.3:75581535-75581554 | None:intergenic | 50.0% | |
TCATACGGACAAGGTGTGTC+CGG | + | chr6.3:75581102-75581121 | MS.gene05358:CDS | 50.0% | |
TGAAACCAAACGGCAGACCA+TGG | - | chr6.3:75580856-75580875 | None:intergenic | 50.0% | |
TGTGTTCATGTAGACCGCAC+CGG | + | chr6.3:75581948-75581967 | MS.gene05358:intron | 50.0% | |
! | AGAAAAGGGGGCGCAACTTA+AGG | + | chr6.3:75582219-75582238 | MS.gene05358:intron | 50.0% |
! | GACCAATCAGGCAGTTTTCG+AGG | - | chr6.3:75580571-75580590 | None:intergenic | 50.0% |
! | GATTTCTGGGTGCAAGTCCA+TGG | + | chr6.3:75580836-75580855 | MS.gene05358:CDS | 50.0% |
! | GCTGATTGGTCATACGGACA+AGG | + | chr6.3:75581093-75581112 | MS.gene05358:CDS | 50.0% |
! | GTGTGGGCTGATTGGTCATA+CGG | + | chr6.3:75581087-75581106 | MS.gene05358:CDS | 50.0% |
! | TGGTTTAGGGGCACAAAGCT+CGG | - | chr6.3:75580812-75580831 | None:intergenic | 50.0% |
!! | CAGTTTTCGAGGATGGCAGT+GGG | - | chr6.3:75580560-75580579 | None:intergenic | 50.0% |
!! | CTAATAGTTTTGCAGGGCCG+TGG | + | chr6.3:75582156-75582175 | MS.gene05358:intron | 50.0% |
!!! | GCGGGGGTCTTGCTTTATTT+TGG | + | chr6.3:75581976-75581995 | MS.gene05358:intron | 50.0% |
AGCCTGGAAGCCAGTCAAAC+GGG | + | chr6.3:75580646-75580665 | MS.gene05358:CDS | 55.0% | |
ATGGGATAGTGATCCGACGC+GGG | - | chr6.3:75582443-75582462 | None:intergenic | 55.0% | |
CAAGTCCATGGTCTGCCGTT+TGG | + | chr6.3:75580848-75580867 | MS.gene05358:CDS | 55.0% | |
CACCCCGTGCTATCGAAGAA+AGG | + | chr6.3:75582345-75582364 | MS.gene05358:intron | 55.0% | |
CAGCAAGGACACGACCAATC+AGG | - | chr6.3:75580583-75580602 | None:intergenic | 55.0% | |
CAGGCTCGGCTTCAAGGTTA+AGG | - | chr6.3:75580535-75580554 | None:intergenic | 55.0% | |
GAGCCTGGAAGCCAGTCAAA+CGG | + | chr6.3:75580645-75580664 | MS.gene05358:CDS | 55.0% | |
GCATGAGTGATAGGGACAGC+CGG | - | chr6.3:75581526-75581545 | None:intergenic | 55.0% | |
GCTGTCCCTATCACTCATGC+TGG | + | chr6.3:75581526-75581545 | MS.gene05358:CDS | 55.0% | |
GCTTCTAACGCAACTGCTGC+AGG | + | chr6.3:75581286-75581305 | MS.gene05358:CDS | 55.0% | |
GGCGCAACTTAAGGTCTCCA+TGG | + | chr6.3:75582228-75582247 | MS.gene05358:intron | 55.0% | |
GTGGTAGACGAACTGCTGCT+TGG | + | chr6.3:75582114-75582133 | MS.gene05358:intron | 55.0% | |
! | GATGATGGCGTGCGAAACTG+GGG | + | chr6.3:75581145-75581164 | MS.gene05358:CDS | 55.0% |
! | GGATGATGGCGTGCGAAACT+GGG | + | chr6.3:75581144-75581163 | MS.gene05358:CDS | 55.0% |
! | GGTTTAGGGGCACAAAGCTC+GGG | - | chr6.3:75580811-75580830 | None:intergenic | 55.0% |
! | GTTGCGCCCCCTTTTCTCAT+TGG | - | chr6.3:75582216-75582235 | None:intergenic | 55.0% |
! | TGTCACAGGTGTGGGCTGAT+TGG | + | chr6.3:75581079-75581098 | MS.gene05358:CDS | 55.0% |
!! | AACCCGTTTGACTGGCTTCC+AGG | - | chr6.3:75580651-75580670 | None:intergenic | 55.0% |
!! | CCGGATTGAAGTGCCGGATT+AGG | - | chr6.3:75581851-75581870 | None:intergenic | 55.0% |
!! | GCAGTTTTCGAGGATGGCAG+TGG | - | chr6.3:75580561-75580580 | None:intergenic | 55.0% |
!! | GGTACAGGTACTGGCTTCTC+TGG | + | chr6.3:75581418-75581437 | MS.gene05358:CDS | 55.0% |
AAAGGCAGGCCCTGCTGATC+AGG | + | chr6.3:75581747-75581766 | MS.gene05358:intron | 60.0% | |
ACAAAGCTCGGGACGACACC+AGG | - | chr6.3:75580800-75580819 | None:intergenic | 60.0% | |
ACAACCACGGACCGTCATCG+AGG | - | chr6.3:75580742-75580761 | None:intergenic | 60.0% | |
ACCGTCATCGAGGACACGAG+TGG | - | chr6.3:75580732-75580751 | None:intergenic | 60.0% | |
CAAAGCTCGGGACGACACCA+GGG | - | chr6.3:75580799-75580818 | None:intergenic | 60.0% | |
CTAGGCAGGCCTGATCAGCA+GGG | - | chr6.3:75581759-75581778 | None:intergenic | 60.0% | |
CTGGTTGGACAGCAAGCTGG+AGG | - | chr6.3:75581485-75581504 | None:intergenic | 60.0% | |
CTTGGTCCTTGGCGAGTCAC+TGG | + | chr6.3:75582071-75582090 | MS.gene05358:intron | 60.0% | |
GCCACTCGTGTCCTCGATGA+CGG | + | chr6.3:75580728-75580747 | MS.gene05358:CDS | 60.0% | |
GCCTGTGGTGCTTGGCTTAC+CGG | + | chr6.3:75581504-75581523 | MS.gene05358:CDS | 60.0% | |
GTAAGCCAAGCACCACAGGC+TGG | - | chr6.3:75581504-75581523 | None:intergenic | 60.0% | |
TCCAACCAGCCTGTGGTGCT+TGG | + | chr6.3:75581496-75581515 | MS.gene05358:CDS | 60.0% | |
TCTAGGCAGGCCTGATCAGC+AGG | - | chr6.3:75581760-75581779 | None:intergenic | 60.0% | |
TGGCGTGTCCGAGCTAGCAA+CGG | + | chr6.3:75581010-75581029 | MS.gene05358:CDS | 60.0% | |
TGGGTTCAGGCTCGGCTTCA+AGG | - | chr6.3:75580541-75580560 | None:intergenic | 60.0% | |
! | AGGCTGGTTGGACAGCAAGC+TGG | - | chr6.3:75581488-75581507 | None:intergenic | 60.0% |
! | CATGTAGACCGCACCGGTAG+AGG | + | chr6.3:75581954-75581973 | MS.gene05358:intron | 60.0% |
! | CGGATGATGGCGTGCGAAAC+TGG | + | chr6.3:75581143-75581162 | MS.gene05358:CDS | 60.0% |
! | CTTGCTGTCCAACCAGCCTG+TGG | + | chr6.3:75581489-75581508 | MS.gene05358:CDS | 60.0% |
! | GATGGCAGTGGGTTCAGGCT+CGG | - | chr6.3:75580549-75580568 | None:intergenic | 60.0% |
! | GCAGGGCCGTGGTGCATTTT+GGG | + | chr6.3:75582167-75582186 | MS.gene05358:intron | 60.0% |
! | TCGAGGATGGCAGTGGGTTC+AGG | - | chr6.3:75580554-75580573 | None:intergenic | 60.0% |
! | TGCAGGGCCGTGGTGCATTT+TGG | + | chr6.3:75582166-75582185 | MS.gene05358:intron | 60.0% |
AGCAAGACCCCCGCCTCTAC+CGG | - | chr6.3:75581970-75581989 | None:intergenic | 65.0% | |
CCACGCGTTGAGCAGCAGGT+CGG | - | chr6.3:75581180-75581199 | None:intergenic | 65.0% | |
CGACCTGCTGCTCAACGCGT+GGG | + | chr6.3:75581178-75581197 | MS.gene05358:CDS | 65.0% | |
GCCAAGCACCACAGGCTGGT+TGG | - | chr6.3:75581500-75581519 | None:intergenic | 65.0% | |
GCCGGTAAGCCAAGCACCAC+AGG | - | chr6.3:75581508-75581527 | None:intergenic | 65.0% | |
! | GTAGACCGCACCGGTAGAGG+CGG | + | chr6.3:75581957-75581976 | MS.gene05358:intron | 65.0% |
! | GTGTCCTCGATGACGGTCCG+TGG | + | chr6.3:75580735-75580754 | MS.gene05358:CDS | 65.0% |
! | TAGACCGCACCGGTAGAGGC+GGG | + | chr6.3:75581958-75581977 | MS.gene05358:intron | 65.0% |
CCGACCTGCTGCTCAACGCG+TGG | + | chr6.3:75581177-75581196 | MS.gene05358:CDS | 70.0% | |
CGCGTTGAGCAGCAGGTCGG+AGG | - | chr6.3:75581177-75581196 | None:intergenic | 70.0% | |
GCGAGCGTATGTCGCGAGCC+TGG | + | chr6.3:75580630-75580649 | MS.gene05358:CDS | 70.0% | |
GTGCCCACGCGTTGAGCAGC+AGG | - | chr6.3:75581184-75581203 | None:intergenic | 70.0% | |
! | AGACCGCACCGGTAGAGGCG+GGG | + | chr6.3:75581959-75581978 | MS.gene05358:intron | 70.0% |
GACCCCCGCCTCTACCGGTG+CGG | - | chr6.3:75581965-75581984 | None:intergenic | 75.0% | |
! | GACCGCACCGGTAGAGGCGG+GGG | + | chr6.3:75581960-75581979 | MS.gene05358:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.3 | gene | 75580476 | 75582539 | 75580476 | ID=MS.gene05358 |
chr6.3 | mRNA | 75580476 | 75582539 | 75580476 | ID=MS.gene05358.t1;Parent=MS.gene05358 |
chr6.3 | exon | 75580476 | 75581681 | 75580476 | ID=MS.gene05358.t1.exon1;Parent=MS.gene05358.t1 |
chr6.3 | CDS | 75580476 | 75581681 | 75580476 | ID=cds.MS.gene05358.t1;Parent=MS.gene05358.t1 |
chr6.3 | exon | 75582438 | 75582539 | 75582438 | ID=MS.gene05358.t1.exon2;Parent=MS.gene05358.t1 |
chr6.3 | CDS | 75582438 | 75582539 | 75582438 | ID=cds.MS.gene05358.t1;Parent=MS.gene05358.t1 |
Gene Sequence |
Protein sequence |