AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene012748

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012748.t1 MTR_3g053920 57.803 346 80 3 1 346 1 280 5.19e-128 374
MS.gene012748.t1 MTR_2g061500 85.271 129 19 0 1 129 1 129 4.31e-75 233
MS.gene012748.t1 MTR_4g103530 76.238 101 23 1 55 155 1 100 7.24e-51 172
MS.gene012748.t1 MTR_8g463110 64.602 113 40 0 400 512 244 356 5.50e-44 165
MS.gene012748.t1 MTR_8g463110 59.649 114 44 1 289 400 1 114 1.11e-28 120
MS.gene012748.t1 MTR_4g020630 59.649 114 46 0 399 512 179 292 5.82e-41 154
MS.gene012748.t1 MTR_7g011710 67.059 85 28 0 55 139 1 85 1.50e-35 130
MS.gene012748.t1 MTR_6g033215 33.503 197 124 3 5 199 103 294 2.74e-32 125
MS.gene012748.t1 MTR_7g063500 60.000 85 34 0 416 500 38 122 7.96e-32 119
MS.gene012748.t1 MTR_0010s0370 37.143 175 104 4 8 177 4 177 4.60e-31 119
MS.gene012748.t1 MTR_0010s0350 37.143 175 104 4 8 177 4 177 4.60e-31 119
MS.gene012748.t1 MTR_5g069440 46.667 105 52 2 406 509 41 142 1.22e-24 100
MS.gene012748.t1 MTR_7g056813 56.471 85 35 1 416 500 8 90 4.42e-24 104
MS.gene012748.t1 MTR_6g034215 51.351 74 36 0 403 476 251 324 4.09e-18 85.9
MS.gene012748.t1 MTR_2g063055 34.746 118 76 1 388 504 61 178 5.26e-18 82.4
MS.gene012748.t1 MTR_7g015270 83.333 42 7 0 471 512 99 140 3.54e-16 78.6
MS.gene012748.t1 MTR_1g036720 35.780 109 68 1 7 113 3 111 4.94e-16 74.3
MS.gene012748.t1 MTR_3g044860 53.571 56 26 0 416 471 126 181 2.69e-12 68.2
MS.gene012748.t1 MTR_7g033160 45.000 60 33 0 453 512 4 63 4.20e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012748.t1 AT2G17920 25.701 214 151 5 8 216 9 219 1.26e-17 84.0
MS.gene012748.t1 AT3G31430 29.121 182 123 4 36 215 134 311 1.30e-15 78.6
MS.gene012748.t1 AT3G57587 26.047 215 149 6 8 216 9 219 6.86e-15 76.6
MS.gene012748.t1 AT2G13450 27.041 196 133 5 27 215 26 218 7.64e-15 76.6
MS.gene012748.t1 AT2G41590 25.490 204 148 2 15 216 18 219 7.90e-15 76.6
MS.gene012748.t1 AT5G36228 26.154 195 136 4 36 226 39 229 1.23e-14 75.9
MS.gene012748.t1 AT5G18636 23.368 291 195 7 36 314 39 313 8.90e-14 73.2
MS.gene012748.t1 AT2G02103 26.230 183 131 2 36 216 39 219 1.47e-13 72.8
MS.gene012748.t1 AT5G25200 25.683 183 132 2 36 216 39 219 1.76e-13 72.4
MS.gene012748.t1 AT3G47920 26.761 142 100 2 77 216 9 148 1.56e-12 68.9

Find 136 sgRNAs with CRISPR-Local

Find 255 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTGAATCACATCGAGTTT+TGG 0.218864 8.1:+658736 MS.gene012748:CDS
CATCCACCTTATGGTGAAAT+TGG 0.242039 8.1:-658620 None:intergenic
TGCCACAGGTGTGGAGTTCT+TGG 0.244477 8.1:+658993 MS.gene012748:CDS
CCTATACCTTGACCTACTTT+TGG 0.251887 8.1:-658795 None:intergenic
AGGTTCATGGTTTACCCTTT+GGG 0.288116 8.1:+658763 MS.gene012748:CDS
CAGGTTCATGGTTTACCCTT+TGG 0.292128 8.1:+658762 MS.gene012748:CDS
GAATTGGGAAACTTTGTAAT+AGG 0.303652 8.1:+659557 MS.gene012748:CDS
CCAAAAGTAGGTCAAGGTAT+AGG 0.305336 8.1:+658795 MS.gene012748:CDS
CAGTTCCGTTCTCTAGGTTA+AGG 0.308245 8.1:-658446 None:intergenic
TTGCTGCCCTCTTCTTCTTC+AGG 0.311022 8.1:+659365 MS.gene012748:CDS
CCGATGATGGAGTTCGTAAC+TGG 0.311235 8.1:+659057 MS.gene012748:CDS
TGATTCAACGGGACAAGGTT+TGG 0.326413 8.1:-658723 None:intergenic
ATTTGCTGCTGATGGGGAAT+TGG 0.326919 8.1:+659541 MS.gene012748:CDS
AGACATACGCTCGCTGAAAT+AGG 0.339311 8.1:-658535 None:intergenic
GAGATACGGCTGCAAGGTTC+TGG 0.346597 8.1:+660609 MS.gene012748:CDS
TGATAACTTTCATATCGTTA+TGG 0.358324 8.1:+658677 MS.gene012748:CDS
CAAAGGAGCAGTGACATCTA+TGG 0.358698 8.1:-658892 None:intergenic
GAAATGCAGCAATACGGTTC+TGG 0.358986 8.1:-659244 None:intergenic
CAAAAGTAGGTCAAGGTATA+GGG 0.367422 8.1:+658796 MS.gene012748:CDS
GGGCAGCAAGTGTACTTTGC+AGG 0.380259 8.1:-659351 None:intergenic
GTCTTAGAACATTGTTTGAT+TGG 0.384724 8.1:+658480 MS.gene012748:CDS
TGTCCCAAGACGATGCATAT+TGG 0.385709 8.1:+660682 MS.gene012748:CDS
ATCGGCAACGACAAGGAAAA+AGG 0.387418 8.1:+660767 MS.gene012748:CDS
TCAGCAAAAGCACTAGGAAA+TGG 0.391820 8.1:-659446 None:intergenic
CAGCAAAAGCACTAGGAAAT+GGG 0.397732 8.1:-659445 None:intergenic
GATTCAACGGGACAAGGTTT+GGG 0.400144 8.1:-658722 None:intergenic
CACGAGTAGCATCCACCTTA+TGG 0.405332 8.1:-658629 None:intergenic
CCCACAAACCTCAACCTTGA+TGG 0.410375 8.1:+658396 MS.gene012748:CDS
AGTTCCGTTCTCTAGGTTAA+GGG 0.413955 8.1:-658445 None:intergenic
GTAGCGATCAGCCACAGATT+TGG 0.415515 8.1:-658592 None:intergenic
ACCATCAAGGTTGAGGTTTG+TGG 0.424563 8.1:-658397 None:intergenic
CCATCAAGGTTGAGGTTTGT+GGG 0.427092 8.1:-658396 None:intergenic
ATGTCTCGCGCTTGGAAGCC+AGG 0.433996 8.1:+658552 MS.gene012748:CDS
TTTGCTGCTGATGGGGAATT+GGG 0.434523 8.1:+659542 MS.gene012748:CDS
CAGTTTCAGTTCCGTTCTCT+AGG 0.434684 8.1:-658452 None:intergenic
GCGCGGAGGACATGACTATC+TGG 0.436180 8.1:+660526 MS.gene012748:CDS
GGTGCTGCTGCTGTTCCTGC+AGG 0.436996 8.1:+659179 MS.gene012748:CDS
CAGGACCGTCCAGTGGTACT+TGG 0.444380 8.1:+659410 MS.gene012748:CDS
ACAAGGTTTGGGACAGCACC+GGG 0.445236 8.1:-658711 None:intergenic
GTGATCGTAACCCTCTTGCC+TGG 0.452901 8.1:-658570 None:intergenic
GACTCTAGCTCGAACAAGTC+AGG 0.476880 8.1:-659035 None:intergenic
GACAAGGTTTGGGACAGCAC+CGG 0.479199 8.1:-658712 None:intergenic
TCCGCGCATGACGACAACTT+TGG 0.481806 8.1:-660510 None:intergenic
ACGCCAATATGCATCGTCTT+GGG 0.484231 8.1:-660685 None:intergenic
GGAGAATCATTTGCTGCTGA+TGG 0.485476 8.1:+659533 MS.gene012748:CDS
GACGCCAATATGCATCGTCT+TGG 0.486875 8.1:-660686 None:intergenic
TGTTGGCATGGCAGCAGGAA+TGG 0.497095 8.1:-659147 None:intergenic
GCACTAGGAAATGGGGCAGC+AGG 0.497599 8.1:-659437 None:intergenic
CAAGTACCACTGGACGGTCC+TGG 0.498402 8.1:-659409 None:intergenic
GGGTTCATTCAACCAAAAGT+AGG 0.498715 8.1:+658783 MS.gene012748:CDS
TGAGACACCGGTTTGAGATA+CGG 0.500092 8.1:-659083 None:intergenic
ATCTCAAACCGGTGTCTCAA+AGG 0.500269 8.1:+659087 MS.gene012748:CDS
CCTTATGGTGAAATTGGAAA+AGG 0.500342 8.1:-658614 None:intergenic
AAAACTCGATGTGATTCAAC+GGG 0.504479 8.1:-658734 None:intergenic
GCTCGCTGAAATAGGCGAGT+TGG 0.513103 8.1:-658527 None:intergenic
GCAGTTGAGTCACGGCCTGC+AGG 0.513455 8.1:-659194 None:intergenic
AAGTAAGACCATCAAGGTTG+AGG 0.517109 8.1:-658404 None:intergenic
TTTGGTTGAATGAACCCAAA+GGG 0.522686 8.1:-658777 None:intergenic
AGGAACTGTGGATTGTGTTA+CGG 0.523255 8.1:-658851 None:intergenic
CGATGTGATTCAACGGGACA+AGG 0.525273 8.1:-658728 None:intergenic
CAAAAGCACCATTGCTAGCA+CGG 0.526781 8.1:-658932 None:intergenic
TGCAGCTTCGAATATACTCC+AGG 0.528769 8.1:+659391 MS.gene012748:CDS
ATCTCTCTAGATAATGATGC+AGG 0.528877 8.1:+660801 MS.gene012748:CDS
CTGGGGACCGTATCTCAAAC+CGG 0.530109 8.1:+659076 MS.gene012748:CDS
GAAGAAAAGAAAACGTATGC+TGG 0.531172 8.1:+659499 MS.gene012748:CDS
GGCCACCTTGAGACGCATAT+AGG 0.533474 8.1:-658871 None:intergenic
GCATGTGTTGGCATGGCAGC+AGG 0.533614 8.1:-659152 None:intergenic
TCCAAAGTTGTCGTCATGCG+CGG 0.533852 8.1:+660509 MS.gene012748:CDS
TGCAGTGCCTGAAGAAGAAG+AGG 0.537044 8.1:-659372 None:intergenic
GACTCAACTGCTGAAGGTAC+AGG 0.537711 8.1:+659206 MS.gene012748:CDS
CGTATGCTGGCCCTTCAGAA+TGG 0.538271 8.1:+659512 MS.gene012748:CDS
GCGAGCGTATGTCTCGCGCT+TGG 0.538462 8.1:+658544 MS.gene012748:CDS
CGATGATGGAGTTCGTAACT+GGG 0.538470 8.1:+659058 MS.gene012748:CDS
TTCGAGCTAGAGTCCGATGA+TGG 0.539232 8.1:+659044 MS.gene012748:CDS
ATCTTGTAACCAACGATTGG+TGG 0.539715 8.1:-659123 None:intergenic
TCTCAAACCGGTGTCTCAAA+GGG 0.539767 8.1:+659088 MS.gene012748:CDS
TGGCGCGTCCGTGCTAGCAA+TGG 0.541527 8.1:+658924 MS.gene012748:CDS
GTTGGCATGGCAGCAGGAAT+GGG 0.545697 8.1:-659146 None:intergenic
CAAGGTTTGGGACAGCACCG+GGG 0.548345 8.1:-658710 None:intergenic
GAGAATCATTTGCTGCTGAT+GGG 0.548792 8.1:+659534 MS.gene012748:CDS
CAAATGATTCTCCATTCTGA+AGG 0.551115 8.1:-659523 None:intergenic
GCTACTCGTGTCCTTGAGGA+AGG 0.552375 8.1:+658642 MS.gene012748:CDS
CAAAACTCGATGTGATTCAA+CGG 0.556739 8.1:-658735 None:intergenic
GCAGCACCGTGAGCATGTGT+TGG 0.563625 8.1:-659164 None:intergenic
AAACCGGTGTCTCAAAGGGT+TGG 0.568425 8.1:+659092 MS.gene012748:CDS
CAAAGGGTAAACCATGAACC+TGG 0.568522 8.1:-658761 None:intergenic
GTTCCAACCCTTTGAGACAC+CGG 0.569839 8.1:-659095 None:intergenic
GTGACTGAAATGCAGCAATA+CGG 0.571865 8.1:-659250 None:intergenic
GTGTCCTTGAGGAAGGTCCA+TGG 0.573573 8.1:+658649 MS.gene012748:CDS
GCATCATCAGCAAAAGCACT+AGG 0.574128 8.1:-659452 None:intergenic
GCAGGTAAACCAAGTACCAC+TGG 0.575821 8.1:-659419 None:intergenic
CGCTTGGAAGCCAGGCAAGA+GGG 0.577013 8.1:+658560 MS.gene012748:CDS
TTTCCAATTTCACCATAAGG+TGG 0.577899 8.1:+658617 MS.gene012748:CDS
GGCCGTGACTCAACTGCTGA+AGG 0.577960 8.1:+659200 MS.gene012748:CDS
CAAGGTTCTGGTGAAGAACA+AGG 0.578169 8.1:+660621 MS.gene012748:CDS
AAGGTTTGGGACAGCACCGG+GGG 0.578765 8.1:-658709 None:intergenic
GGGATCTTGTAACCAACGAT+TGG 0.583369 8.1:-659126 None:intergenic
TTCATGCATCGGCAACGACA+AGG 0.585533 8.1:+660760 MS.gene012748:CDS
AAAACTCATTGGTATAAGGA+TGG 0.588913 8.1:+660717 MS.gene012748:CDS
GATGATGCAAATGAAGAGAA+TGG 0.589763 8.1:+659467 MS.gene012748:CDS
AAGGTCGCATGTTTGAACTT+CGG 0.592588 8.1:+660640 MS.gene012748:CDS
GCCATGCCAACACATGCTCA+CGG 0.598118 8.1:+659158 MS.gene012748:CDS
GAACTGCTGCCACCAATCGT+TGG 0.601781 8.1:+659114 MS.gene012748:CDS
GGTCTTACTTTGTCCGACGA+AGG 0.603908 8.1:+658417 MS.gene012748:CDS
TACCTTCAGCAGTTGAGTCA+CGG 0.604424 8.1:-659202 None:intergenic
ACCGTGAGCATGTGTTGGCA+TGG 0.606917 8.1:-659159 None:intergenic
CCAGTTACGAACTCCATCAT+CGG 0.608923 8.1:-659057 None:intergenic
GTAGACATATGCAAGAGATA+CGG 0.609239 8.1:+660595 MS.gene012748:CDS
ATTCAACCAAAAGTAGGTCA+AGG 0.610226 8.1:+658789 MS.gene012748:CDS
CAGTTCCTATATGCGTCTCA+AGG 0.610999 8.1:+658866 MS.gene012748:CDS
GGATGCTACTCGTGTCCTTG+AGG 0.617317 8.1:+658638 MS.gene012748:CDS
ACATCGCATTCTGGGCAGCA+AGG 0.618980 8.1:-659298 None:intergenic
GCGCTTGGAAGCCAGGCAAG+AGG 0.619608 8.1:+658559 MS.gene012748:CDS
TGAAAGTTATCATAAAGCCA+TGG 0.620426 8.1:-658666 None:intergenic
AGTTCTTGGTCACACAGACA+AGG 0.621043 8.1:+659007 MS.gene012748:CDS
AGCAAAAGCACTAGGAAATG+GGG 0.621463 8.1:-659444 None:intergenic
GTTATGGATCATATCTCCCC+CGG 0.623912 8.1:+658693 MS.gene012748:CDS
CGGACAAAGTAAGACCATCA+AGG 0.624527 8.1:-658410 None:intergenic
AAAGCCATGGACCTTCCTCA+AGG 0.630239 8.1:-658653 None:intergenic
ATGCAAGAGATACGGCTGCA+AGG 0.632808 8.1:+660603 MS.gene012748:CDS
GTTAAGGGTGAGACCTTCGT+CGG 0.636712 8.1:-658430 None:intergenic
AAATGATTCTCCATTCTGAA+GGG 0.641506 8.1:-659522 None:intergenic
AGAATCATTTGCTGCTGATG+GGG 0.652526 8.1:+659535 MS.gene012748:CDS
AACTTCGGAAACGTATGCAG+CGG 0.658257 8.1:+660655 MS.gene012748:CDS
AAAGTTGTCGTCATGCGCGG+AGG 0.662405 8.1:+660512 MS.gene012748:CDS
CTCACCCTTAACCTAGAGAA+CGG 0.662426 8.1:+658441 MS.gene012748:CDS
GACCAAGAACTCCACACCTG+TGG 0.670356 8.1:-658995 None:intergenic
TTCCTATATGCGTCTCAAGG+TGG 0.674483 8.1:+658869 MS.gene012748:CDS
GGTTACGATCACCAAATCTG+TGG 0.685127 8.1:+658581 MS.gene012748:CDS
TTTCACGATCAGCTAGCACA+CGG 0.685932 8.1:-658503 None:intergenic
TATACTCCAGGACCGTCCAG+TGG 0.700206 8.1:+659403 MS.gene012748:CDS
GCAGTGCCTGAAGAAGAAGA+GGG 0.701286 8.1:-659371 None:intergenic
TGAGACGCATATAGGAACTG+TGG 0.703416 8.1:-658863 None:intergenic
TAAGTTACAGCATGACATCG+AGG 0.721867 8.1:+660566 MS.gene012748:CDS
GTAAACCAAGTACCACTGGA+CGG 0.724171 8.1:-659415 None:intergenic
GATGATGGAGTTCGTAACTG+GGG 0.735382 8.1:+659059 MS.gene012748:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATTTTAAATATGAAAAACT+TGG + chr8.1:658963-658982 MS.gene012748:CDS 15.0%
!!! GTAGTTCTTCAATTTTATTA+CGG - chr8.1:659813-659832 None:intergenic 20.0%
! AAATGTCTGTTATAGTAAGT+AGG - chr8.1:660402-660421 None:intergenic 25.0%
! ATAGGACAAAATGTTAGTAA+TGG + chr8.1:659575-659594 MS.gene012748:intron 25.0%
! ATGTTAGCAAAAAAAGGTAA+CGG + chr8.1:659317-659336 MS.gene012748:CDS 25.0%
! TAGGACAAAATGTTAGTAAT+GGG + chr8.1:659576-659595 MS.gene012748:intron 25.0%
! TATGAATATCTTTCAACAAC+AGG + chr8.1:660875-660894 MS.gene012748:intron 25.0%
! TGATAACTTTCATATCGTTA+TGG + chr8.1:658677-658696 MS.gene012748:CDS 25.0%
! TGTTGAAAATGTTGATGTAA+CGG + chr8.1:659637-659656 MS.gene012748:intron 25.0%
!! ATTTTCGTTATGAAAATGCT+TGG + chr8.1:660418-660437 MS.gene012748:intron 25.0%
!! TCAACATTTTCAACAAAAAG+CGG - chr8.1:659632-659651 None:intergenic 25.0%
AAAACTCATTGGTATAAGGA+TGG + chr8.1:660717-660736 MS.gene012748:CDS 30.0%
AAATGATTCTCCATTCTGAA+GGG - chr8.1:659525-659544 None:intergenic 30.0%
AACAAAGTTACTAGTGAACA+AGG + chr8.1:660825-660844 MS.gene012748:intron 30.0%
AATAGGATAATGATCAGATG+CGG - chr8.1:660352-660371 None:intergenic 30.0%
AATGCGATGTTAGCAAAAAA+AGG + chr8.1:659311-659330 MS.gene012748:CDS 30.0%
AGGACAAAATGTTAGTAATG+GGG + chr8.1:659577-659596 MS.gene012748:intron 30.0%
GAAATCATTGACACTATTCT+TGG + chr8.1:659961-659980 MS.gene012748:intron 30.0%
GAATTGGGAAACTTTGTAAT+AGG + chr8.1:659557-659576 MS.gene012748:CDS 30.0%
GTCTTAGAACATTGTTTGAT+TGG + chr8.1:658480-658499 MS.gene012748:CDS 30.0%
TGAAAGTTATCATAAAGCCA+TGG - chr8.1:658669-658688 None:intergenic 30.0%
! AGATTTTCTACAGATGCATT+TGG - chr8.1:660321-660340 None:intergenic 30.0%
!! CAACTTTCTAATAGTTTTGC+AGG + chr8.1:660057-660076 MS.gene012748:intron 30.0%
!!! TACGAAGTTTTTTCATGCAT+CGG + chr8.1:660749-660768 MS.gene012748:CDS 30.0%
AAAACTCGATGTGATTCAAC+GGG - chr8.1:658737-658756 None:intergenic 35.0%
ATAGGATAATGATCAGATGC+GGG - chr8.1:660351-660370 None:intergenic 35.0%
ATCTCTCTAGATAATGATGC+AGG + chr8.1:660801-660820 MS.gene012748:CDS 35.0%
ATTCAACCAAAAGTAGGTCA+AGG + chr8.1:658789-658808 MS.gene012748:CDS 35.0%
CAAAACTCGATGTGATTCAA+CGG - chr8.1:658738-658757 None:intergenic 35.0%
CAAAAGTAGGTCAAGGTATA+GGG + chr8.1:658796-658815 MS.gene012748:CDS 35.0%
CAAATGATTCTCCATTCTGA+AGG - chr8.1:659526-659545 None:intergenic 35.0%
CCTTATGGTGAAATTGGAAA+AGG - chr8.1:658617-658636 None:intergenic 35.0%
CGCAAAAACTCATTGGTATA+AGG + chr8.1:660713-660732 MS.gene012748:CDS 35.0%
CTAGAGTCTCACTTAAGAAA+AGG - chr8.1:659786-659805 None:intergenic 35.0%
GAAGAAAAGAAAACGTATGC+TGG + chr8.1:659499-659518 MS.gene012748:CDS 35.0%
GAAGAACTACGTTATTTGCT+TGG + chr8.1:659823-659842 MS.gene012748:intron 35.0%
GATGATGCAAATGAAGAGAA+TGG + chr8.1:659467-659486 MS.gene012748:CDS 35.0%
GGACAAAATGTTAGTAATGG+GGG + chr8.1:659578-659597 MS.gene012748:intron 35.0%
GTAGACATATGCAAGAGATA+CGG + chr8.1:660595-660614 MS.gene012748:CDS 35.0%
TCACTTAAGAAAAGGATGTC+CGG - chr8.1:659778-659797 None:intergenic 35.0%
TTATGAAAATGCTTGGCACT+TGG + chr8.1:660425-660444 MS.gene012748:intron 35.0%
TTTCCAATTTCACCATAAGG+TGG + chr8.1:658617-658636 MS.gene012748:CDS 35.0%
TTTGGTTGAATGAACCCAAA+GGG - chr8.1:658780-658799 None:intergenic 35.0%
! ACAAAATGTTAGTAATGGGG+GGG + chr8.1:659580-659599 MS.gene012748:intron 35.0%
! CCTTTTCCAATTTCACCATA+AGG + chr8.1:658614-658633 MS.gene012748:CDS 35.0%
! GACAAAATGTTAGTAATGGG+GGG + chr8.1:659579-659598 MS.gene012748:intron 35.0%
! GTTGAATCACATCGAGTTTT+GGG + chr8.1:658737-658756 MS.gene012748:CDS 35.0%
! TTTTAGATGCAAGTGAGAAG+CGG + chr8.1:660112-660131 MS.gene012748:intron 35.0%
! TTTTGCTAACATCGCATTCT+GGG - chr8.1:659309-659328 None:intergenic 35.0%
! TTTTTGCTAACATCGCATTC+TGG - chr8.1:659310-659329 None:intergenic 35.0%
!! TTTTGGTTGAATGAACCCAA+AGG - chr8.1:658781-658800 None:intergenic 35.0%
!!! CAAGGTATAGGGAGTTTTTT+AGG + chr8.1:658807-658826 MS.gene012748:CDS 35.0%
!!! GAGTTTTTTAGGCACTCTTA+AGG + chr8.1:658818-658837 MS.gene012748:CDS 35.0%
AACACGAAATCCGTAAAACC+CGG - chr8.1:660453-660472 None:intergenic 40.0%
AAGGTCGCATGTTTGAACTT+CGG + chr8.1:660640-660659 MS.gene012748:CDS 40.0%
AAGTAAGACCATCAAGGTTG+AGG - chr8.1:658407-658426 None:intergenic 40.0%
AATCCATTAATGAGCCAAGG+AGG - chr8.1:660153-660172 None:intergenic 40.0%
AATTCCAAGCAGCAATTCGA+CGG - chr8.1:660029-660048 None:intergenic 40.0%
AGACTCTTGAACCATGTGAA+CGG - chr8.1:660228-660247 None:intergenic 40.0%
AGGTTCATGGTTTACCCTTT+GGG + chr8.1:658763-658782 MS.gene012748:CDS 40.0%
AGTTCCGTTCTCTAGGTTAA+GGG - chr8.1:658448-658467 None:intergenic 40.0%
ATCTTGTAACCAACGATTGG+TGG - chr8.1:659126-659145 None:intergenic 40.0%
CATCCACCTTATGGTGAAAT+TGG - chr8.1:658623-658642 None:intergenic 40.0%
CCAAAAGTAGGTCAAGGTAT+AGG + chr8.1:658795-658814 MS.gene012748:CDS 40.0%
CGAAATCCATTAATGAGCCA+AGG - chr8.1:660156-660175 None:intergenic 40.0%
CGGATTTCGTGTTTGATTCT+TGG + chr8.1:660460-660479 MS.gene012748:intron 40.0%
GAAAATGTTGATGTAACGGC+AGG + chr8.1:659641-659660 MS.gene012748:intron 40.0%
GGGTTCATTCAACCAAAAGT+AGG + chr8.1:658783-658802 MS.gene012748:CDS 40.0%
GTGACTGAAATGCAGCAATA+CGG - chr8.1:659253-659272 None:intergenic 40.0%
TAAGTTACAGCATGACATCG+AGG + chr8.1:660566-660585 MS.gene012748:CDS 40.0%
TAATACCCAGTAACTCTCCA+AGG - chr8.1:659988-660007 None:intergenic 40.0%
TATTATGGCTATCCGAATGG+TGG + chr8.1:660003-660022 MS.gene012748:intron 40.0%
TGGAGAGTTACTGGGTATTA+TGG + chr8.1:659988-660007 MS.gene012748:intron 40.0%
TGTCAGATGTACCTTTCGAA+GGG + chr8.1:660199-660218 MS.gene012748:intron 40.0%
TTCACATGGTTCAAGAGTCT+TGG + chr8.1:660228-660247 MS.gene012748:intron 40.0%
TTGACACTATTCTTGGTCCT+TGG + chr8.1:659968-659987 MS.gene012748:intron 40.0%
TTGTCAGATGTACCTTTCGA+AGG + chr8.1:660198-660217 MS.gene012748:intron 40.0%
TTTAGATGCAAGTGAGAAGC+GGG + chr8.1:660113-660132 MS.gene012748:intron 40.0%
TTTCGTGTTTGATTCTTGGC+AGG + chr8.1:660464-660483 MS.gene012748:intron 40.0%
! AGAATCATTTGCTGCTGATG+GGG + chr8.1:659535-659554 MS.gene012748:CDS 40.0%
! AGGAACTGTGGATTGTGTTA+CGG - chr8.1:658854-658873 None:intergenic 40.0%
! CCTATACCTTGACCTACTTT+TGG - chr8.1:658798-658817 None:intergenic 40.0%
! CGTTGAATCACATCGAGTTT+TGG + chr8.1:658736-658755 MS.gene012748:CDS 40.0%
! CTGCTCCTTTGAAAAAAGAC+TGG + chr8.1:658904-658923 MS.gene012748:CDS 40.0%
! GAAAGGTACATCTGACAAAC+CGG - chr8.1:660196-660215 None:intergenic 40.0%
! GAGAATCATTTGCTGCTGAT+GGG + chr8.1:659534-659553 MS.gene012748:CDS 40.0%
!! AGCAAAAGCACTAGGAAATG+GGG - chr8.1:659447-659466 None:intergenic 40.0%
!! CAGCAAAAGCACTAGGAAAT+GGG - chr8.1:659448-659467 None:intergenic 40.0%
!! CTAATAGTTTTGCAGGTCCT+TGG + chr8.1:660064-660083 MS.gene012748:intron 40.0%
!! GGAGAGCATTGCAACAAAAT+AGG - chr8.1:660369-660388 None:intergenic 40.0%
!! TCAGCAAAAGCACTAGGAAA+TGG - chr8.1:659449-659468 None:intergenic 40.0%
AAATGCTTGGCACTTGGAAC+CGG + chr8.1:660431-660450 MS.gene012748:intron 45.0%
AACTTCGGAAACGTATGCAG+CGG + chr8.1:660655-660674 MS.gene012748:CDS 45.0%
AAGTCCCCAAAAATGCACCA+AGG - chr8.1:660084-660103 None:intergenic 45.0%
ACCATCAAGGTTGAGGTTTG+TGG - chr8.1:658400-658419 None:intergenic 45.0%
ACGCCAATATGCATCGTCTT+GGG - chr8.1:660688-660707 None:intergenic 45.0%
AGACATACGCTCGCTGAAAT+AGG - chr8.1:658538-658557 None:intergenic 45.0%
AGTTCTTGGTCACACAGACA+AGG + chr8.1:659007-659026 MS.gene012748:CDS 45.0%
ATCGGCAACGACAAGGAAAA+AGG + chr8.1:660767-660786 MS.gene012748:CDS 45.0%
ATCTCAAACCGGTGTCTCAA+AGG + chr8.1:659087-659106 MS.gene012748:CDS 45.0%
CAAAGGAGCAGTGACATCTA+TGG - chr8.1:658895-658914 None:intergenic 45.0%
CAAAGGGTAAACCATGAACC+TGG - chr8.1:658764-658783 None:intergenic 45.0%
CAGGTTCATGGTTTACCCTT+TGG + chr8.1:658762-658781 MS.gene012748:CDS 45.0%
CAGTTCCGTTCTCTAGGTTA+AGG - chr8.1:658449-658468 None:intergenic 45.0%
CAGTTCCTATATGCGTCTCA+AGG + chr8.1:658866-658885 MS.gene012748:CDS 45.0%
CAGTTTCAGTTCCGTTCTCT+AGG - chr8.1:658455-658474 None:intergenic 45.0%
CCAGTTACGAACTCCATCAT+CGG - chr8.1:659060-659079 None:intergenic 45.0%
CCATCAAGGTTGAGGTTTGT+GGG - chr8.1:658399-658418 None:intergenic 45.0%
CCGAACTAGGTACTTAAGGT+CGG - chr8.1:659746-659765 None:intergenic 45.0%
CCGACCTTAAGTACCTAGTT+CGG + chr8.1:659743-659762 MS.gene012748:intron 45.0%
CGAACTAGGTACTTAAGGTC+GGG - chr8.1:659745-659764 None:intergenic 45.0%
CGGACAAAGTAAGACCATCA+AGG - chr8.1:658413-658432 None:intergenic 45.0%
CGTCATGCAGTACTTGATTC+CGG + chr8.1:660174-660193 MS.gene012748:intron 45.0%
CTAGACTCATTTACCTAGGC+AGG - chr8.1:659681-659700 None:intergenic 45.0%
CTCACCCTTAACCTAGAGAA+CGG + chr8.1:658441-658460 MS.gene012748:CDS 45.0%
GAAATGCAGCAATACGGTTC+TGG - chr8.1:659247-659266 None:intergenic 45.0%
GATTCAACGGGACAAGGTTT+GGG - chr8.1:658725-658744 None:intergenic 45.0%
GCCACTAGACTCATTTACCT+AGG - chr8.1:659685-659704 None:intergenic 45.0%
GCCTAGGTAAATGAGTCTAG+TGG + chr8.1:659681-659700 MS.gene012748:intron 45.0%
GGGATCTTGTAACCAACGAT+TGG - chr8.1:659129-659148 None:intergenic 45.0%
GGGTATTATGGCTATCCGAA+TGG + chr8.1:660000-660019 MS.gene012748:intron 45.0%
GGTTACGATCACCAAATCTG+TGG + chr8.1:658581-658600 MS.gene012748:CDS 45.0%
GTAAACCAAGTACCACTGGA+CGG - chr8.1:659418-659437 None:intergenic 45.0%
GTTATGGATCATATCTCCCC+CGG + chr8.1:658693-658712 MS.gene012748:CDS 45.0%
TACCTTCAGCAGTTGAGTCA+CGG - chr8.1:659205-659224 None:intergenic 45.0%
TAGTAAGTAGGCCGAAGCTT+AGG - chr8.1:660390-660409 None:intergenic 45.0%
TCTCAAACCGGTGTCTCAAA+GGG + chr8.1:659088-659107 MS.gene012748:CDS 45.0%
TGAGACGCATATAGGAACTG+TGG - chr8.1:658866-658885 None:intergenic 45.0%
TGATTCAACGGGACAAGGTT+TGG - chr8.1:658726-658745 None:intergenic 45.0%
TGCAATGCTCTCCTAAGCTT+CGG + chr8.1:660376-660395 MS.gene012748:intron 45.0%
TGCAGCTTCGAATATACTCC+AGG + chr8.1:659391-659410 MS.gene012748:CDS 45.0%
TGTCCCAAGACGATGCATAT+TGG + chr8.1:660682-660701 MS.gene012748:CDS 45.0%
TTAAGGTCGGGAATTGCACT+CGG - chr8.1:659733-659752 None:intergenic 45.0%
TTAGATGCAAGTGAGAAGCG+GGG + chr8.1:660114-660133 MS.gene012748:intron 45.0%
TTCCTATATGCGTCTCAAGG+TGG + chr8.1:658869-658888 MS.gene012748:CDS 45.0%
TTGGTCCTTGGAGAGTTACT+GGG + chr8.1:659980-659999 MS.gene012748:intron 45.0%
TTTCACGATCAGCTAGCACA+CGG - chr8.1:658506-658525 None:intergenic 45.0%
TTTGCTGCTGATGGGGAATT+GGG + chr8.1:659542-659561 MS.gene012748:CDS 45.0%
! AGTGCCGAACTAGGTACTTA+AGG - chr8.1:659750-659769 None:intergenic 45.0%
! ATTTGCTGCTGATGGGGAAT+TGG + chr8.1:659541-659560 MS.gene012748:CDS 45.0%
! CAAGGTTCTGGTGAAGAACA+AGG + chr8.1:660621-660640 MS.gene012748:CDS 45.0%
! GGAGAATCATTTGCTGCTGA+TGG + chr8.1:659533-659552 MS.gene012748:CDS 45.0%
!! AGGTCCTTGGTGCATTTTTG+GGG + chr8.1:660077-660096 MS.gene012748:intron 45.0%
!! CAAAAGCACCATTGCTAGCA+CGG - chr8.1:658935-658954 None:intergenic 45.0%
!! CAGGTCCTTGGTGCATTTTT+GGG + chr8.1:660076-660095 MS.gene012748:intron 45.0%
!! CGATGATGGAGTTCGTAACT+GGG + chr8.1:659058-659077 MS.gene012748:CDS 45.0%
!! GATGATGGAGTTCGTAACTG+GGG + chr8.1:659059-659078 MS.gene012748:CDS 45.0%
!! GCATCATCAGCAAAAGCACT+AGG - chr8.1:659455-659474 None:intergenic 45.0%
!! TGAGACACCGGTTTGAGATA+CGG - chr8.1:659086-659105 None:intergenic 45.0%
!!! AACTTGGTGTGTTTTGCCAC+AGG + chr8.1:658979-658998 MS.gene012748:CDS 45.0%
!!! ACGCGCCAGTCTTTTTTCAA+AGG - chr8.1:658912-658931 None:intergenic 45.0%
AAACCGGTGTCTCAAAGGGT+TGG + chr8.1:659092-659111 MS.gene012748:CDS 50.0%
AAAGCCATGGACCTTCCTCA+AGG - chr8.1:658656-658675 None:intergenic 50.0%
AATGCTTGGCACTTGGAACC+GGG + chr8.1:660432-660451 MS.gene012748:intron 50.0%
AGGCCTCCTTGGCTCATTAA+TGG + chr8.1:660147-660166 MS.gene012748:intron 50.0%
ATGCAAGAGATACGGCTGCA+AGG + chr8.1:660603-660622 MS.gene012748:CDS 50.0%
ATTAATGAGCCAAGGAGGCC+TGG - chr8.1:660148-660167 None:intergenic 50.0%
CACGAGTAGCATCCACCTTA+TGG - chr8.1:658632-658651 None:intergenic 50.0%
CCCACAAACCTCAACCTTGA+TGG + chr8.1:658396-658415 MS.gene012748:CDS 50.0%
CCTAGTTCGGCACTTCAATC+CGG + chr8.1:659756-659775 MS.gene012748:intron 50.0%
CGATGTGATTCAACGGGACA+AGG - chr8.1:658731-658750 None:intergenic 50.0%
CTTGGTCCTTGGAGAGTTAC+TGG + chr8.1:659979-659998 MS.gene012748:intron 50.0%
GACGCCAATATGCATCGTCT+TGG - chr8.1:660689-660708 None:intergenic 50.0%
GCAGGTAAACCAAGTACCAC+TGG - chr8.1:659422-659441 None:intergenic 50.0%
GCAGTGCCTGAAGAAGAAGA+GGG - chr8.1:659374-659393 None:intergenic 50.0%
GCGCTCTAGCAAACAACACT+TGG + chr8.1:660283-660302 MS.gene012748:intron 50.0%
GGTAAATGAGTCTAGTGGCG+TGG + chr8.1:659686-659705 MS.gene012748:intron 50.0%
GGTCTTACTTTGTCCGACGA+AGG + chr8.1:658417-658436 MS.gene012748:CDS 50.0%
GTAGCGATCAGCCACAGATT+TGG - chr8.1:658595-658614 None:intergenic 50.0%
GTCAGCGCGCAAAAACTCAT+TGG + chr8.1:660706-660725 MS.gene012748:CDS 50.0%
GTCTAGTGGCGTGGAATTGT+CGG + chr8.1:659695-659714 MS.gene012748:intron 50.0%
GTGAACGGATACCCTTCGAA+AGG - chr8.1:660213-660232 None:intergenic 50.0%
GTTAAGGGTGAGACCTTCGT+CGG - chr8.1:658433-658452 None:intergenic 50.0%
TAAGGTCGGGAATTGCACTC+GGG - chr8.1:659732-659751 None:intergenic 50.0%
TAGATGCAAGTGAGAAGCGG+GGG + chr8.1:660115-660134 MS.gene012748:intron 50.0%
TCCAAAGTTGTCGTCATGCG+CGG + chr8.1:660509-660528 MS.gene012748:CDS 50.0%
TCTAGTGGCGTGGAATTGTC+GGG + chr8.1:659696-659715 MS.gene012748:intron 50.0%
TGCAGTGCCTGAAGAAGAAG+AGG - chr8.1:659375-659394 None:intergenic 50.0%
TGTGTTCATGTAGACCGCAC+CGG + chr8.1:659856-659875 MS.gene012748:intron 50.0%
TTCGAGCTAGAGTCCGATGA+TGG + chr8.1:659044-659063 MS.gene012748:CDS 50.0%
TTGCTGCCCTCTTCTTCTTC+AGG + chr8.1:659365-659384 MS.gene012748:CDS 50.0%
! GACTCAACTGCTGAAGGTAC+AGG + chr8.1:659206-659225 MS.gene012748:CDS 50.0%
! GACTCTAGCTCGAACAAGTC+AGG - chr8.1:659038-659057 None:intergenic 50.0%
! GCACTTGGAACCGGGTTTTA+CGG + chr8.1:660440-660459 MS.gene012748:intron 50.0%
! TTCATGCATCGGCAACGACA+AGG + chr8.1:660760-660779 MS.gene012748:CDS 50.0%
!! CCGATGATGGAGTTCGTAAC+TGG + chr8.1:659057-659076 MS.gene012748:CDS 50.0%
!! GCAGGTCCTTGGTGCATTTT+TGG + chr8.1:660075-660094 MS.gene012748:intron 50.0%
!! GTTCCAACCCTTTGAGACAC+CGG - chr8.1:659098-659117 None:intergenic 50.0%
!! TCGAAGGGTATCCGTTCACA+TGG + chr8.1:660214-660233 MS.gene012748:intron 50.0%
!!! GAGTTTTGGGTCCAGGTTCA+TGG + chr8.1:658750-658769 MS.gene012748:CDS 50.0%
!!! GCGGGGGTCTTGCTTTATTT+TGG + chr8.1:659884-659903 MS.gene012748:intron 50.0%
!!! TCACATCGAGTTTTGGGTCC+AGG + chr8.1:658743-658762 MS.gene012748:CDS 50.0%
AAAGTTGTCGTCATGCGCGG+AGG + chr8.1:660512-660531 MS.gene012748:CDS 55.0%
AACCTTTCTTCCACCGCACG+TGG - chr8.1:660258-660277 None:intergenic 55.0%
ACATCGCATTCTGGGCAGCA+AGG - chr8.1:659301-659320 None:intergenic 55.0%
CGTATGCTGGCCCTTCAGAA+TGG + chr8.1:659512-659531 MS.gene012748:CDS 55.0%
CTAGTGGCGTGGAATTGTCG+GGG + chr8.1:659697-659716 MS.gene012748:intron 55.0%
CTGGGGACCGTATCTCAAAC+CGG + chr8.1:659076-659095 MS.gene012748:CDS 55.0%
GAACTGCTGCCACCAATCGT+TGG + chr8.1:659114-659133 MS.gene012748:CDS 55.0%
GACCAAGAACTCCACACCTG+TGG - chr8.1:658998-659017 None:intergenic 55.0%
GAGATACGGCTGCAAGGTTC+TGG + chr8.1:660609-660628 MS.gene012748:CDS 55.0%
GCAATTCGACGGCCACCATT+CGG - chr8.1:660018-660037 None:intergenic 55.0%
GCCATGCCAACACATGCTCA+CGG + chr8.1:659158-659177 MS.gene012748:CDS 55.0%
GCTACTCGTGTCCTTGAGGA+AGG + chr8.1:658642-658661 MS.gene012748:CDS 55.0%
GCTCGCTGAAATAGGCGAGT+TGG - chr8.1:658530-658549 None:intergenic 55.0%
GGATGCTACTCGTGTCCTTG+AGG + chr8.1:658638-658657 MS.gene012748:CDS 55.0%
GGCCACCTTGAGACGCATAT+AGG - chr8.1:658874-658893 None:intergenic 55.0%
GGGCAGCAAGTGTACTTTGC+AGG - chr8.1:659354-659373 None:intergenic 55.0%
GTGATCGTAACCCTCTTGCC+TGG - chr8.1:658573-658592 None:intergenic 55.0%
GTGTCCTTGAGGAAGGTCCA+TGG + chr8.1:658649-658668 MS.gene012748:CDS 55.0%
GTTGGCATGGCAGCAGGAAT+GGG - chr8.1:659149-659168 None:intergenic 55.0%
TATACTCCAGGACCGTCCAG+TGG + chr8.1:659403-659422 MS.gene012748:CDS 55.0%
TCCGCGCATGACGACAACTT+TGG - chr8.1:660513-660532 None:intergenic 55.0%
TGCCACAGGTGTGGAGTTCT+TGG + chr8.1:658993-659012 MS.gene012748:CDS 55.0%
TGTTGGCATGGCAGCAGGAA+TGG - chr8.1:659150-659169 None:intergenic 55.0%
! ACAAGGTTTGGGACAGCACC+GGG - chr8.1:658714-658733 None:intergenic 55.0%
! ACCGTGAGCATGTGTTGGCA+TGG - chr8.1:659162-659181 None:intergenic 55.0%
! GACAAGGTTTGGGACAGCAC+CGG - chr8.1:658715-658734 None:intergenic 55.0%
! GGTGTGTTTTGCCACAGGTG+TGG + chr8.1:658984-659003 MS.gene012748:CDS 55.0%
!! CCGGATTGAAGTGCCGAACT+AGG - chr8.1:659759-659778 None:intergenic 55.0%
AATGAGCCAAGGAGGCCTGG+TGG - chr8.1:660145-660164 None:intergenic 60.0%
ATGTCTCGCGCTTGGAAGCC+AGG + chr8.1:658552-658571 MS.gene012748:CDS 60.0%
CAAGTACCACTGGACGGTCC+TGG - chr8.1:659412-659431 None:intergenic 60.0%
CACCACGTGCGGTGGAAGAA+AGG + chr8.1:660253-660272 MS.gene012748:intron 60.0%
CAGGACCGTCCAGTGGTACT+TGG + chr8.1:659410-659429 MS.gene012748:CDS 60.0%
CGCTTGGAAGCCAGGCAAGA+GGG + chr8.1:658560-658579 MS.gene012748:CDS 60.0%
GAGTCTTGGCACACCACGTG+CGG + chr8.1:660242-660261 MS.gene012748:intron 60.0%
GCACTAGGAAATGGGGCAGC+AGG - chr8.1:659440-659459 None:intergenic 60.0%
GCAGCACCGTGAGCATGTGT+TGG - chr8.1:659167-659186 None:intergenic 60.0%
GCGCGGAGGACATGACTATC+TGG + chr8.1:660526-660545 MS.gene012748:CDS 60.0%
GCGTGGAATTGTCGGGGTGT+AGG + chr8.1:659703-659722 MS.gene012748:intron 60.0%
GGCCGTGACTCAACTGCTGA+AGG + chr8.1:659200-659219 MS.gene012748:CDS 60.0%
GTGGCCGTCGAATTGCTGCT+TGG + chr8.1:660022-660041 MS.gene012748:intron 60.0%
TGTAACGGCAGGCCATGCTG+AGG + chr8.1:659652-659671 MS.gene012748:intron 60.0%
! AAGGTTTGGGACAGCACCGG+GGG - chr8.1:658712-658731 None:intergenic 60.0%
! CAAGGTTTGGGACAGCACCG+GGG - chr8.1:658713-658732 None:intergenic 60.0%
! GCATGTGTTGGCATGGCAGC+AGG - chr8.1:659155-659174 None:intergenic 60.0%
AACGGCAGGCCATGCTGAGG+AGG + chr8.1:659655-659674 MS.gene012748:intron 65.0%
CATGCTGAGGAGGCCTGCCT+AGG + chr8.1:659665-659684 MS.gene012748:intron 65.0%
CTAGGCAGGCCTCCTCAGCA+TGG - chr8.1:659667-659686 None:intergenic 65.0%
GCAGTTGAGTCACGGCCTGC+AGG - chr8.1:659197-659216 None:intergenic 65.0%
GCGAGCGTATGTCTCGCGCT+TGG + chr8.1:658544-658563 MS.gene012748:CDS 65.0%
GCGCTTGGAAGCCAGGCAAG+AGG + chr8.1:658559-658578 MS.gene012748:CDS 65.0%
TCTTGGCACACCACGTGCGG+TGG + chr8.1:660245-660264 MS.gene012748:intron 65.0%
TGGCGCGTCCGTGCTAGCAA+TGG + chr8.1:658924-658943 MS.gene012748:CDS 65.0%
! CATGTAGACCGCACCGGCAG+AGG + chr8.1:659862-659881 MS.gene012748:intron 65.0%
!! GGTGCTGCTGCTGTTCCTGC+AGG + chr8.1:659179-659198 MS.gene012748:CDS 65.0%
AGCAAGACCCCCGCCTCTGC+CGG - chr8.1:659878-659897 None:intergenic 70.0%
! GTAGACCGCACCGGCAGAGG+CGG + chr8.1:659865-659884 MS.gene012748:intron 70.0%
! TAGACCGCACCGGCAGAGGC+GGG + chr8.1:659866-659885 MS.gene012748:intron 70.0%
GGCGCACCACCAGGCCTCCT+TGG + chr8.1:660136-660155 MS.gene012748:intron 75.0%
! AGAAGCGGGGGCGCACCACC+AGG + chr8.1:660127-660146 MS.gene012748:intron 75.0%
! AGACCGCACCGGCAGAGGCG+GGG + chr8.1:659867-659886 MS.gene012748:intron 75.0%
! GACCCCCGCCTCTGCCGGTG+CGG - chr8.1:659873-659892 None:intergenic 80.0%
!! GACCGCACCGGCAGAGGCGG+GGG + chr8.1:659868-659887 MS.gene012748:intron 80.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 658390 660901 658390 ID=MS.gene012748
chr8.1 mRNA 658390 660901 658390 ID=MS.gene012748.t1;Parent=MS.gene012748
chr8.1 exon 658390 659586 658390 ID=MS.gene012748.t1.exon1;Parent=MS.gene012748.t1
chr8.1 CDS 658390 659586 658390 ID=cds.MS.gene012748.t1;Parent=MS.gene012748.t1
chr8.1 exon 660486 660822 660486 ID=MS.gene012748.t1.exon2;Parent=MS.gene012748.t1
chr8.1 CDS 660486 660822 660486 ID=cds.MS.gene012748.t1;Parent=MS.gene012748.t1
chr8.1 exon 660897 660901 660897 ID=MS.gene012748.t1.exon3;Parent=MS.gene012748.t1
chr8.1 CDS 660897 660901 660897 ID=cds.MS.gene012748.t1;Parent=MS.gene012748.t1
Gene Sequence

>MS.gene012748

ATGGATCCCACAAACCTCAACCTTGATGGTCTTACTTTGTCCGACGAAGGTCTCACCCTTAACCTAGAGAACGGAACTGAAACTGCAGCTGTCTTAGAACATTGTTTGATTGGCCGTGTGCTAGCTGATCGTGAAATCCAACTCGCCTATTTCAGCGAGCGTATGTCTCGCGCTTGGAAGCCAGGCAAGAGGGTTACGATCACCAAATCTGTGGCTGATCGCTACCTTTTCCAATTTCACCATAAGGTGGATGCTACTCGTGTCCTTGAGGAAGGTCCATGGCTTTATGATAACTTTCATATCGTTATGGATCATATCTCCCCCGGTGCTGTCCCAAACCTTGTCCCGTTGAATCACATCGAGTTTTGGGTCCAGGTTCATGGTTTACCCTTTGGGTTCATTCAACCAAAAGTAGGTCAAGGTATAGGGAGTTTTTTAGGCACTCTTAAGGCTTACGATGTCCGTAACACAATCCACAGTTCCTATATGCGTCTCAAGGTGGCCATAGATGTCACTGCTCCTTTGAAAAAAGACTGGCGCGTCCGTGCTAGCAATGGTGCTTTTGTTACTGTTGATTTTAAATATGAAAAACTTGGTGTGTTTTGCCACAGGTGTGGAGTTCTTGGTCACACAGACAAGGTTTGTCCTGACTTGTTCGAGCTAGAGTCCGATGATGGAGTTCGTAACTGGGGACCGTATCTCAAACCGGTGTCTCAAAGGGTTGGAACTGCTGCCACCAATCGTTGGTTACAAGATCCCATTCCTGCTGCCATGCCAACACATGCTCACGGTGCTGCTGCTGTTCCTGCAGGCCGTGACTCAACTGCTGAAGGTACAGGCACTGTGACGAATTTCCAGAACCGTATTGCTGCATTTCAGTCACAACTCTCTGCTATGCGACATGATGTCCTTGCTGCCCAGAATGCGATGTTAGCAAAAAAAGGTAACGGTGTCAATTCTGCCTGCAAAGTACACTTGCTGCCCTCTTCTTCTTCAGGCACTGCAGCTTCGAATATACTCCAGGACCGTCCAGTGGTACTTGGTTTACCTGCTGCCCCATTTCCTAGTGCTTTTGCTGATGATGCAAATGAAGAGAATGGCTCAGAATTGAAGAAAAGAAAACGTATGCTGGCCCTTCAGAATGGAGAATCATTTGCTGCTGATGGGGAATTGGGAAACTTTGTAATAGGACAAAATGTTAGTAATGGGGGGGATGTTGAAATGAATGTAATTTCTAATCCGCTTTTTGTTGAAAATGTTGATGTAACGGCAGGCCATGCTGAGGAGGCCTGCCTAGGTAAATGAGTCTAGTGGCGTGGAATTGTCGGGGTGTAGGTAGCCCGAGTGCAATTCCCGACCTTAAGTACCTAGTTCGGCACTTCAATCCGGACATCCTTTTCTTAAGTGAGACTCTAGCTCACCGTAATAAAATTGAAGAACTACGTTATTTGCTTGGTTACGATTCTTGTGTTCATGTAGACCGCACCGGCAGAGGCGGGGGTCTTGCTTTATTTTGGCGCAACTCTTTTAATTGTCAACTTATTGATTTTTCACATAATCATATAACTGTTGAAATCATTGACACTATTCTTGGTCCTTGGAGAGTTACTGGGTATTATGGCTATCCGAATGGTGGCCGTCGAATTGCTGCTTGGAATTTTCTTCGTCAACTTTCTAATAGTTTTGCAGGTCCTTGGTGCATTTTTGGGGACTTTAACGATATTTTAGATGCAAGTGAGAAGCGGGGGCGCACCACCAGGCCTCCTTGGCTCATTAATGGATTTCGTCATGCAGTACTTGATTCCGGTTTGTCAGATGTACCTTTCGAAGGGTATCCGTTCACATGGTTCAAGAGTCTTGGCACACCACGTGCGGTGGAAGAAAGGTTAGATCGCGCTCTAGCAAACAACACTTGGTTTAATATATTTCCAAATGCATCTGTAGAAAATCTTGTTGCTCCCGCATCTGATCATTATCCTATTTTGTTGCAATGCTCTCCTAAGCTTCGGCCTACTTACTATAACAGACATTTTCGTTATGAAAATGCTTGGCACTTGGAACCGGGTTTTACGGATTTCGTGTTTGATTCTTGGCAGGTGCACTCTAATAACACTCTTATTCCAAAGTTGTCGTCATGCGCGGAGGACATGACTATCTGGAAAAAAACTCATTGTCATAAGTTACAGCATGACATCGAGGATTGTCGTAGACATATGCAAGAGATACGGCTGCAAGGTTCTGGTGAAGAACAAGGTCGCATGTTTGAACTTCGGAAACGTATGCAGCGGTTATTGTCCCAAGACGATGCATATTGGCGTCAGCGCGCAAAAACTCATTGGTATAAGGATGGCGATAGAAATACGAAGTTTTTTCATGCATCGGCAACGACAAGGAAAAAGGTAAATCGTATAATCTCTCTAGATAATGATGCAGGTAACAAAGTTACTAGTGAACAAGGTTTGCAAGATGTAGCAAAACAATACTTTATGAATATCTTTCAACAACAGGATAG
Protein sequence

>MS.gene012748.t1

MDPTNLNLDGLTLSDEGLTLNLENGTETAAVLEHCLIGRVLADREIQLAYFSERMSRAWKPGKRVTITKSVADRYLFQFHHKVDATRVLEEGPWLYDNFHIVMDHISPGAVPNLVPLNHIEFWVQVHGLPFGFIQPKVGQGIGSFLGTLKAYDVRNTIHSSYMRLKVAIDVTAPLKKDWRVRASNGAFVTVDFKYEKLGVFCHRCGVLGHTDKVCPDLFELESDDGVRNWGPYLKPVSQRVGTAATNRWLQDPIPAAMPTHAHGAAAVPAGRDSTAEGTGTVTNFQNRIAAFQSQLSAMRHDVLAAQNAMLAKKGNGVNSACKVHLLPSSSSGTAASNILQDRPVVLGLPAAPFPSAFADDANEENGSELKKRKRMLALQNGESFAADGELGNFVIGQNVHSNNTLIPKLSSCAEDMTIWKKTHCHKLQHDIEDCRRHMQEIRLQGSGEEQGRMFELRKRMQRLLSQDDAYWRQRAKTHWYKDGDRNTKFFHASATTRKKVNRIISLDNDAG