AlfalfaGEDB | MS.gene35202

M. sativa cultivar XinJiangDaYe / MS.gene35202

KEGG: -
GO: GO:0003674 GO:0003676 GO:0005488 GO:0008270 GO:0043167 GO:0043169 GO:0046872 GO:0046914 GO:0097159 GO:1901363
PFAM: PF14111.9 PF14392.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35202.t1	AES70414.1	56.2	349	66	5	1	331	1	280	8.50E-95	357.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35202.t1	O04244	28.7	136	93	2	83	216	6	139	5.0e-11	70.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35202.t1	G7J017	56.2	349	66	5	1	331	1	280	6.1e-95	357.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene47792	MS.gene35202	PPI
MS.gene46948	MS.gene35202	PPI
MS.gene35202	MS.gene02896	PPI
MS.gene35202	MS.gene71588	PPI
MS.gene93396	MS.gene35202	PPI
MS.gene35202	MS.gene34463	PPI
MS.gene05231	MS.gene35202	PPI
MS.gene35202	MS.gene042614	PPI
MS.gene35202	MS.gene026680	PPI
MS.gene35202	MS.gene61499	PPI
MS.gene010656	MS.gene35202	PPI
MS.gene35202	MS.gene019165	PPI
MS.gene35202	MS.gene81194	PPI
MS.gene050679	MS.gene35202	PPI
MS.gene35202	MS.gene038394	PPI
MS.gene20246	MS.gene35202	PPI
MS.gene055223	MS.gene35202	PPI
MS.gene35202	MS.gene019001	PPI
MS.gene071784	MS.gene35202	PPI
MS.gene053747	MS.gene35202	PPI
MS.gene35202	MS.gene53904	PPI
MS.gene35202	MS.gene73261	PPI
MS.gene35202	MS.gene85538	PPI
MS.gene35202	MS.gene025675	PPI
MS.gene65471	MS.gene35202	PPI
MS.gene061850	MS.gene35202	PPI
MS.gene35202	MS.gene055546	PPI
MS.gene35202	MS.gene71637	PPI
MS.gene35202	MS.gene55209	PPI
MS.gene35202	MS.gene96174	PPI
MS.gene35202	MS.gene28718	PPI
MS.gene042559	MS.gene35202	PPI
MS.gene35202	MS.gene022929	PPI
MS.gene35202	MS.gene85295	PPI
MS.gene98616	MS.gene35202	PPI
MS.gene35202	MS.gene068629	PPI
MS.gene69490	MS.gene35202	PPI
MS.gene35202	MS.gene009781	PPI
MS.gene35202	MS.gene047954	PPI
MS.gene015248	MS.gene35202	PPI
MS.gene35202	MS.gene048342	PPI
MS.gene35202	MS.gene069624	PPI
MS.gene44083	MS.gene35202	PPI
MS.gene08106	MS.gene35202	PPI
MS.gene35202	MS.gene21066	PPI
MS.gene35202	MS.gene013890	PPI
MS.gene35202	MS.gene073582	PPI
MS.gene067340	MS.gene35202	PPI
MS.gene35202	MS.gene028714	PPI
MS.gene35202	MS.gene042027	PPI
MS.gene35202	MS.gene048706	PPI
MS.gene35202	MS.gene69586	PPI
MS.gene23521	MS.gene35202	PPI
MS.gene35202	MS.gene45083	PPI
MS.gene35202	MS.gene049561	PPI
MS.gene35202	MS.gene008658	PPI
MS.gene35202	MS.gene80362	PPI
MS.gene35202	MS.gene49057	PPI
MS.gene35202	MS.gene03936	PPI
MS.gene87529	MS.gene35202	PPI
MS.gene35202	MS.gene048088	PPI
MS.gene04134	MS.gene35202	PPI
MS.gene062067	MS.gene35202	PPI
MS.gene35202	MS.gene08708	PPI
MS.gene57044	MS.gene35202	PPI
MS.gene35202	MS.gene86275	PPI
MS.gene35202	MS.gene034643	PPI
MS.gene038676	MS.gene35202	PPI
MS.gene042651	MS.gene35202	PPI
MS.gene35202	MS.gene012889	PPI
MS.gene35202	MS.gene038757	PPI
MS.gene35202	MS.gene000506	PPI
MS.gene35202	MS.gene39956	PPI
MS.gene35202	MS.gene028716	PPI
MS.gene35202	MS.gene74639	PPI
MS.gene35202	MS.gene071133	PPI
MS.gene35202	MS.gene60266	PPI
MS.gene35202	MS.gene98467	PPI
MS.gene35202	MS.gene51804	PPI
MS.gene35202	MS.gene013644	PPI
MS.gene35202	MS.gene54051	PPI
MS.gene35202	MS.gene22111	PPI
MS.gene35202	MS.gene049610	PPI
MS.gene35202	MS.gene37955	PPI
MS.gene71588	MS.gene35202	PPI
MS.gene04749	MS.gene35202	PPI
MS.gene35202	MS.gene34197	PPI
MS.gene35202	MS.gene045875	PPI
MS.gene35202	MS.gene010890	PPI
MS.gene35202	MS.gene84790	PPI
MS.gene35202	MS.gene061579	PPI
MS.gene35202	MS.gene41979	PPI
MS.gene42903	MS.gene35202	PPI
MS.gene35202	MS.gene04970	PPI
MS.gene35202	MS.gene26038	PPI
MS.gene35202	MS.gene060788	PPI
MS.gene35202	MS.gene43924	PPI
MS.gene35202	MS.gene41643	PPI
MS.gene048747	MS.gene35202	PPI
MS.gene35202	MS.gene77990	PPI
MS.gene35202	MS.gene062511	PPI
MS.gene35202	MS.gene008861	PPI
MS.gene22200	MS.gene35202	PPI
MS.gene35202	MS.gene027994	PPI
MS.gene35202	MS.gene26433	PPI
MS.gene35202	MS.gene007022	PPI
MS.gene35202	MS.gene045614	PPI
MS.gene26038	MS.gene35202	PPI
MS.gene35202	MS.gene69584	PPI
MS.gene35202	MS.gene52349	PPI
MS.gene94654	MS.gene35202	PPI
MS.gene35202	MS.gene021647	PPI
MS.gene35202	MS.gene76420	PPI
MS.gene35202	MS.gene46353	PPI
MS.gene35202	MS.gene65471	PPI
MS.gene031967	MS.gene35202	PPI
MS.gene35202	MS.gene071784	PPI
MS.gene34812	MS.gene35202	PPI
MS.gene02896	MS.gene35202	PPI
MS.gene063214	MS.gene35202	PPI
MS.gene97410	MS.gene35202	PPI
MS.gene32415	MS.gene35202	PPI
MS.gene35202	MS.gene61651	PPI
MS.gene35202	MS.gene29406	PPI
MS.gene035626	MS.gene35202	PPI
MS.gene35202	MS.gene016719	PPI
MS.gene35202	MS.gene88393	PPI
MS.gene65623	MS.gene35202	PPI
MS.gene35202	MS.gene054508	PPI
MS.gene71675	MS.gene35202	PPI
MS.gene35202	MS.gene053373	PPI
MS.gene69495	MS.gene35202	PPI
MS.gene049512	MS.gene35202	PPI
MS.gene35202	MS.gene041264	PPI
MS.gene35202	MS.gene35175	PPI
MS.gene038623	MS.gene35202	PPI
MS.gene05357	MS.gene35202	PPI
MS.gene35202	MS.gene63150	PPI
MS.gene032311	MS.gene35202	PPI
MS.gene35202	MS.gene44083	PPI
MS.gene030090	MS.gene35202	PPI
MS.gene35202	MS.gene072852	PPI
MS.gene018196	MS.gene35202	PPI
MS.gene35202	MS.gene65474	PPI
MS.gene86849	MS.gene35202	PPI
MS.gene35202	MS.gene025401	PPI
MS.gene35202	MS.gene015093	PPI
MS.gene57019	MS.gene35202	PPI
MS.gene35202	MS.gene06164	PPI
MS.gene35202	MS.gene50392	PPI
MS.gene35202	MS.gene22730	PPI
MS.gene35202	MS.gene032299	PPI
MS.gene35202	MS.gene017586	PPI
MS.gene021968	MS.gene35202	PPI
MS.gene35202	MS.gene037634	PPI
MS.gene35202	MS.gene057828	PPI
MS.gene35202	MS.gene071320	PPI
MS.gene35202	MS.gene08606	PPI
MS.gene09589	MS.gene35202	PPI
MS.gene35202	MS.gene000640	PPI
MS.gene35202	MS.gene09517	PPI
MS.gene35202	MS.gene98756	PPI
MS.gene35202	MS.gene87845	PPI
MS.gene43393	MS.gene35202	PPI
MS.gene34197	MS.gene35202	PPI
MS.gene35202	MS.gene85308	PPI
MS.gene008275	MS.gene35202	PPI
MS.gene35202	MS.gene64130	PPI
MS.gene35202	MS.gene62249	PPI
MS.gene35202	MS.gene024522	PPI
MS.gene35202	MS.gene046089	PPI
MS.gene35202	MS.gene010290	PPI
MS.gene048072	MS.gene35202	PPI
MS.gene060386	MS.gene35202	PPI
MS.gene35202	MS.gene053747	PPI
MS.gene35202	MS.gene92517	PPI
MS.gene35202	MS.gene021555	PPI
MS.gene35202	MS.gene36069	PPI
MS.gene35202	MS.gene71675	PPI
MS.gene05436	MS.gene35202	PPI
MS.gene35202	MS.gene044729	PPI
MS.gene059736	MS.gene35202	PPI
MS.gene047954	MS.gene35202	PPI
MS.gene35202	MS.gene60390	PPI
MS.gene35175	MS.gene35202	PPI
MS.gene35202	MS.gene039692	PPI
MS.gene35202	MS.gene55682	PPI
MS.gene35202	MS.gene002590	PPI
MS.gene35202	MS.gene81712	PPI
MS.gene35202	MS.gene008927	PPI
MS.gene021965	MS.gene35202	PPI
MS.gene055683	MS.gene35202	PPI
MS.gene35202	MS.gene23521	PPI
MS.gene35202	MS.gene005120	PPI
MS.gene35202	MS.gene65546	PPI
MS.gene96109	MS.gene35202	PPI
MS.gene35202	MS.gene024297	PPI
MS.gene35202	MS.gene059269	PPI
MS.gene35202	MS.gene057934	PPI
MS.gene35202	MS.gene024841	PPI
MS.gene35202	MS.gene069786	PPI
MS.gene35202	MS.gene025158	PPI
MS.gene35202	MS.gene40828	PPI
MS.gene35202	MS.gene87529	PPI
MS.gene35202	MS.gene51799	PPI
MS.gene35202	MS.gene98471	PPI
MS.gene61452	MS.gene35202	PPI
MS.gene83772	MS.gene35202	PPI
MS.gene008927	MS.gene35202	PPI
MS.gene016102	MS.gene35202	PPI
MS.gene46941	MS.gene35202	PPI
MS.gene045614	MS.gene35202	PPI
MS.gene96541	MS.gene35202	PPI
MS.gene35202	MS.gene40469	PPI
MS.gene63762	MS.gene35202	PPI
MS.gene35202	MS.gene09023	PPI
MS.gene35202	MS.gene025987	PPI
MS.gene30208	MS.gene35202	PPI
MS.gene35202	MS.gene95960	PPI
MS.gene35202	MS.gene043140	PPI
MS.gene025873	MS.gene35202	PPI
MS.gene012019	MS.gene35202	PPI
MS.gene35202	MS.gene61452	PPI
MS.gene35202	MS.gene03149	PPI
MS.gene013676	MS.gene35202	PPI
MS.gene05358	MS.gene35202	PPI
MS.gene95561	MS.gene35202	PPI
MS.gene35202	MS.gene29321	PPI
MS.gene35202	MS.gene018745	PPI
MS.gene065627	MS.gene35202	PPI
MS.gene35202	MS.gene037049	PPI
MS.gene018745	MS.gene35202	PPI
MS.gene000629	MS.gene35202	PPI
MS.gene35202	MS.gene24278	PPI
MS.gene35202	MS.gene000379	PPI
MS.gene35202	MS.gene34618	PPI
MS.gene35202	MS.gene59460	PPI
MS.gene35202	MS.gene060773	PPI
MS.gene05319	MS.gene35202	PPI
MS.gene35202	MS.gene66650	PPI
MS.gene35202	MS.gene009121	PPI
MS.gene038098	MS.gene35202	PPI
MS.gene56991	MS.gene35202	PPI
MS.gene60059	MS.gene35202	PPI
MS.gene35202	MS.gene08713	PPI
MS.gene35202	MS.gene70932	PPI
MS.gene35202	MS.gene024405	PPI
MS.gene28545	MS.gene35202	PPI
MS.gene35202	MS.gene021965	PPI
MS.gene35202	MS.gene24070	PPI
MS.gene35202	MS.gene059736	PPI
MS.gene35202	MS.gene58419	PPI
MS.gene35202	MS.gene26844	PPI
MS.gene35202	MS.gene64178	PPI
MS.gene064966	MS.gene35202	PPI
MS.gene35202	MS.gene074257	PPI
MS.gene35202	MS.gene073573	PPI
MS.gene35202	MS.gene44144	PPI
MS.gene35202	MS.gene05576	PPI
MS.gene35202	MS.gene060718	PPI
MS.gene35202	MS.gene63743	PPI
MS.gene046089	MS.gene35202	PPI
MS.gene35202	MS.gene48477	PPI
MS.gene036423	MS.gene35202	PPI
MS.gene35202	MS.gene027169	PPI
MS.gene35202	MS.gene004417	PPI
MS.gene35202	MS.gene019177	PPI
MS.gene72520	MS.gene35202	PPI
MS.gene013193	MS.gene35202	PPI
MS.gene66651	MS.gene35202	PPI
MS.gene35202	MS.gene055560	PPI
MS.gene35202	MS.gene009213	PPI
MS.gene35202	MS.gene98127	PPI
MS.gene051449	MS.gene35202	PPI
MS.gene35202	MS.gene003264	PPI
MS.gene35202	MS.gene054652	PPI
MS.gene35202	MS.gene000634	PPI
MS.gene35202	MS.gene37537	PPI
MS.gene35202	MS.gene86849	PPI
MS.gene35202	MS.gene42010	PPI
MS.gene35202	MS.gene049512	PPI
MS.gene35202	MS.gene27329	PPI
MS.gene35202	MS.gene41393	PPI
MS.gene30136	MS.gene35202	PPI
MS.gene35202	MS.gene89815	PPI
MS.gene008861	MS.gene35202	PPI
MS.gene35202	MS.gene016632	PPI
MS.gene35202	MS.gene018474	PPI
MS.gene012748	MS.gene35202	PPI
MS.gene35202	MS.gene86868	PPI
MS.gene83979	MS.gene35202	PPI
MS.gene35202	MS.gene058889	PPI
MS.gene35202	MS.gene96163	PPI
MS.gene85295	MS.gene35202	PPI
MS.gene35202	MS.gene65623	PPI
MS.gene35202	MS.gene012748	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35202.t1	MTR_3g053920	55.587	349	68	5	1	331	1	280	3.26e-118	345
MS.gene35202.t1	MTR_2g061500	82.946	129	22	0	1	129	1	129	7.15e-75	229
MS.gene35202.t1	MTR_4g103530	81.053	95	18	0	55	149	1	95	1.69e-51	171
MS.gene35202.t1	MTR_7g011710	70.588	85	25	0	55	139	1	85	7.98e-38	134
MS.gene35202.t1	MTR_6g033215	34.503	171	110	1	31	199	124	294	8.69e-33	125
MS.gene35202.t1	MTR_0010s0370	36.313	179	102	4	7	177	3	177	4.69e-31	117
MS.gene35202.t1	MTR_0010s0350	36.313	179	102	4	7	177	3	177	4.69e-31	117
MS.gene35202.t1	MTR_8g463110	47.788	113	39	2	292	384	1	113	4.80e-20	92.8
MS.gene35202.t1	MTR_1g036720	33.028	109	71	1	7	113	3	111	4.11e-13	65.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35202.t1	AT2G17920	28.372	215	144	5	8	216	9	219	8.91e-19	86.7
MS.gene35202.t1	AT3G57587	30.282	142	95	2	77	216	80	219	3.24e-17	82.8
MS.gene35202.t1	AT2G41590	30.986	142	94	2	77	216	80	219	4.47e-17	82.4
MS.gene35202.t1	AT3G31430	28.230	209	142	4	11	215	107	311	2.67e-16	79.7
MS.gene35202.t1	AT2G13450	28.415	183	125	4	36	215	39	218	2.84e-16	80.5
MS.gene35202.t1	AT5G36228	27.854	219	117	4	8	216	32	219	7.15e-16	79.0
MS.gene35202.t1	AT3G47920	32.168	143	91	3	77	216	9	148	3.08e-15	76.3
MS.gene35202.t1	AT5G25200	28.873	142	97	2	77	216	80	219	6.24e-15	76.3
MS.gene35202.t1	AT5G18636	28.873	142	97	2	77	216	80	219	7.23e-15	75.9
MS.gene35202.t1	AT2G02103	29.577	142	96	2	77	216	80	219	1.10e-14	75.5
MS.gene35202.t1	AT4G02000	28.676	136	93	2	83	216	6	139	1.57e-13	71.2

Find 114 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAGACTCGGTGTCAAGGTTT+AGG	0.204492	4.4:-18774942	None:intergenic
ATTTACTGCTGATGGGGATA+TGG	0.227145	4.4:+18776046	MS.gene35202:CDS
CTGATGATGGTGTTAGAAAT+TGG	0.263857	4.4:+18775553	MS.gene35202:CDS
AGACTCGGTGTCAAGGTTTA+GGG	0.305615	4.4:-18774941	None:intergenic
TCCTATCCCTTGACCTACTT+TGG	0.306186	4.4:-18775292	None:intergenic
CGCCACCAGCAGCATTGGTT+TGG	0.311726	4.4:-18775665	None:intergenic
CGACATGCGTTCGCTGAAAT+AGG	0.325418	4.4:-18775031	None:intergenic
CAAGTCCATGGTCTTCCATT+TGG	0.332640	4.4:+18775258	MS.gene35202:CDS
CCTATCCCTTGACCTACTTT+GGG	0.336493	4.4:-18775291	None:intergenic
TCATAGCAGTGAGTTGGTTC+TGG	0.357299	4.4:-18775770	None:intergenic
GATATGGGAAACAATGTAAT+AGG	0.357808	4.4:+18776062	MS.gene35202:CDS
CCCACAAATCTTAACCTTGC+TGG	0.383915	4.4:+18774892	MS.gene35202:CDS
TGTCACAGGTGCGGCTTGCT+TGG	0.388808	4.4:+18775489	MS.gene35202:CDS
ATCCTTGAACACTGTTTGAT+AGG	0.396654	4.4:+18774976	MS.gene35202:CDS
CTCTTCCTCTACAGGTAATT+CGG	0.397802	4.4:+18775878	MS.gene35202:intron
GTTTGGCGTGGCACAGAGGC+AGG	0.410640	4.4:-18775648	None:intergenic
ACCAGCAAGGTTAAGATTTG+TGG	0.415806	4.4:-18774893	None:intergenic
TCCCTTGACCTACTTTGGGT+TGG	0.416051	4.4:-18775287	None:intergenic
CCAACTCACTGCTATGAAAC+AGG	0.420169	4.4:+18775776	MS.gene35202:CDS
TGATGATGGTGTTAGAAATT+GGG	0.422542	4.4:+18775554	MS.gene35202:CDS
CGTGGCACAGAGGCAGGGAT+GGG	0.423260	4.4:-18775642	None:intergenic
GCGAACGCATGTCGCGTGCC+TGG	0.435880	4.4:+18775040	MS.gene35202:CDS
CCAGACCGTCCTATAGTGCT+CGG	0.436589	4.4:+18775915	MS.gene35202:CDS
TTTACTGCTGATGGGGATAT+GGG	0.442251	4.4:+18776047	MS.gene35202:CDS
GGAGAATCATTTACTGCTGA+TGG	0.447740	4.4:+18776038	MS.gene35202:CDS
GTACCAATCTTGTGTGAAAC+CGG	0.448245	4.4:-18775591	None:intergenic
TTGAAGCCAGCGATTGGTTG+CGG	0.450189	4.4:-18775616	None:intergenic
AAGCCGGTTTCACACAAGAT+TGG	0.450238	4.4:+18775588	MS.gene35202:CDS
GCGTGGCACAGAGGCAGGGA+TGG	0.450671	4.4:-18775643	None:intergenic
GACCTATCAAACAGTGTTCA+AGG	0.452361	4.4:-18774978	None:intergenic
TCTTGTGTGAAACCGGCTTA+AGG	0.455891	4.4:-18775584	None:intergenic
GTGCCTGGAAGCCAGTCAAA+AGG	0.461780	4.4:+18775055	MS.gene35202:CDS
CCAGCAAGGTTAAGATTTGT+GGG	0.465000	4.4:-18774892	None:intergenic
GTTAAGATTTGTGGGATCCA+TGG	0.466327	4.4:-18774884	None:intergenic
GCAGGTAGCCCGAGCACTAT+AGG	0.467447	4.4:-18775924	None:intergenic
GTTCGCTGAAATAGGCAAAC+TGG	0.470508	4.4:-18775023	None:intergenic
GCGTCTCGTGTCCTTGATGA+AGG	0.476940	4.4:+18775138	MS.gene35202:CDS
GTGGCACAGAGGCAGGGATG+GGG	0.482798	4.4:-18775641	None:intergenic
ATTGAAGGATGTCGGAGTTC+CGG	0.483352	4.4:-18775730	None:intergenic
GTGCGGCTTGCTTGGTCATA+CGG	0.483738	4.4:+18775497	MS.gene35202:CDS
TCAGTCTCAAATGGAACAGC+AGG	0.490272	4.4:-18775942	None:intergenic
GCAGGTATATCGCAGCCAAC+AGG	0.490305	4.4:-18775699	None:intergenic
GGAGTTCCGGTACCAGCAGC+AGG	0.496414	4.4:-18775717	None:intergenic
TCATACGGACAAGGTGTGTC+CGG	0.497073	4.4:+18775512	MS.gene35202:CDS
TTGGGTTGGATGAAACCAAA+TGG	0.500680	4.4:-18775273	None:intergenic
TGGTCTGACTTTGTCTGAAG+AGG	0.501622	4.4:+18774912	MS.gene35202:CDS
ACAAAACTAGGAACCACACC+AGG	0.515946	4.4:-18775207	None:intergenic
GGTTTCATCCAACCCAAAGT+AGG	0.516131	4.4:+18775279	MS.gene35202:CDS
TTAAGATTTGTGGGATCCAT+GGG	0.519569	4.4:-18774883	None:intergenic
AAATAACGAAGAAGTGCATA+AGG	0.520293	4.4:+18775965	MS.gene35202:CDS
GTGTCCGGAGCTGTATGAAT+TGG	0.521204	4.4:+18775527	MS.gene35202:CDS
GGGGTCTTGAAGCCAGCGAT+TGG	0.526020	4.4:-18775622	None:intergenic
ACGGTCTGGCAGCATATTAG+AGG	0.526242	4.4:-18775901	None:intergenic
GAGAATCATTTACTGCTGAT+GGG	0.527081	4.4:+18776039	MS.gene35202:CDS
GGCAAGCATACGATCATTGA+AGG	0.529590	4.4:-18775745	None:intergenic
CGCCAAACCAATGCTGCTGG+TGG	0.530854	4.4:+18775663	MS.gene35202:CDS
CCTGTTTCATAGCAGTGAGT+TGG	0.533573	4.4:-18775776	None:intergenic
CCGAGCACTATAGGACGGTC+TGG	0.537267	4.4:-18775915	None:intergenic
TGAACTTAAGGCCGAGGTGT+AGG	0.539640	4.4:-18776889	None:intergenic
CCAGCAGCATTGGTTTGGCG+TGG	0.541626	4.4:-18775660	None:intergenic
GTACTGCCGCAACCAATCGC+TGG	0.541819	4.4:+18775610	MS.gene35202:CDS
CGCATGTTCAACCTTCAGAA+TGG	0.543074	4.4:+18776017	MS.gene35202:CDS
TATGAATTGGACTCTGATGA+TGG	0.543306	4.4:+18775540	MS.gene35202:CDS
GATATACCTGCTGCTGGTAC+CGG	0.546434	4.4:+18775711	MS.gene35202:CDS
ATTTGCGCCACCAGCAGCAT+TGG	0.550383	4.4:-18775670	None:intergenic
TTGGGGAGCTGACCTTAAGC+CGG	0.550680	4.4:+18775572	MS.gene35202:CDS
TAAATGATTCTCCATTCTGA+AGG	0.552225	4.4:-18776028	None:intergenic
GGTCTGACTTTGTCTGAAGA+GGG	0.553936	4.4:+18774913	MS.gene35202:CDS
AGCCACTCTGAGGCGCATAT+AGG	0.554985	4.4:-18775367	None:intergenic
CTTGTTTCAATTTCACCACA+AGG	0.555217	4.4:+18775110	MS.gene35202:CDS
CCACGCCAAACCAATGCTGC+TGG	0.559698	4.4:+18775660	MS.gene35202:CDS
ATCCAACCCAAAGTAGGTCA+AGG	0.560028	4.4:+18775285	MS.gene35202:CDS
TGATTCAAGGACACAAAACT+AGG	0.560268	4.4:-18775219	None:intergenic
GGCGCAACACTGACAAGTAT+AGG	0.563029	4.4:-18776868	None:intergenic
TGCCTGGAAGCCAGTCAAAA+GGG	0.564305	4.4:+18775056	MS.gene35202:CDS
TGTTTATGAACTTAAGGCCG+AGG	0.566460	4.4:-18776895	None:intergenic
GAGTCCAATTCATACAGCTC+CGG	0.566714	4.4:-18775531	None:intergenic
ATAGGATAATGATCAGAAGT+AGG	0.567632	4.4:-18776850	None:intergenic
TTTGGCGTGGCACAGAGGCA+GGG	0.573611	4.4:-18775647	None:intergenic
CTTGCTTGGTCATACGGACA+AGG	0.574893	4.4:+18775503	MS.gene35202:CDS
CAGAGTGGCTATTGATGTCA+CGG	0.576319	4.4:+18775380	MS.gene35202:CDS
CAGACCGTCCTATAGTGCTC+GGG	0.589006	4.4:+18775916	MS.gene35202:CDS
AGCAGTGAGTTGGTTCTGGA+AGG	0.590387	4.4:-18775766	None:intergenic
ATACGATCATTGAAGGATGT+CGG	0.599217	4.4:-18775738	None:intergenic
GGCTGCGATATACCTGCTGC+TGG	0.599666	4.4:+18775705	MS.gene35202:CDS
ACAACCACGGACCTTCATCA+AGG	0.599966	4.4:-18775149	None:intergenic
TGGCGTGTTCGTGCTAGTAA+CGG	0.608633	4.4:+18775420	MS.gene35202:CDS
GTTACGATCACAAAATCTGT+TGG	0.611426	4.4:+18775078	MS.gene35202:CDS
TTGGCTCGGATTTGAAGAAG+AGG	0.612704	4.4:+18775991	MS.gene35202:CDS
TCCAACCCAAAGTAGGTCAA+GGG	0.615642	4.4:+18775286	MS.gene35202:CDS
GGCGCAAATGATGTTCCTGT+TGG	0.618151	4.4:+18775684	MS.gene35202:CDS
GAAGAAGTGCATAAGGACAT+TGG	0.620210	4.4:+18775972	MS.gene35202:CDS
AGAATCATTTACTGCTGATG+GGG	0.624744	4.4:+18776040	MS.gene35202:CDS
AGTGCATAAGGACATTGGCT+CGG	0.627151	4.4:+18775977	MS.gene35202:CDS
CCCAAAGTAGGTCAAGGGAT+AGG	0.631660	4.4:+18775291	MS.gene35202:CDS
GGATCGAATCAACCCTGGTG+TGG	0.631726	4.4:+18775194	MS.gene35202:CDS
CACGAGACGCATCCACCTTG+TGG	0.636445	4.4:-18775125	None:intergenic
TGCTATTGTTGAGACTCTTG+TGG	0.642175	4.4:+18776825	MS.gene35202:intron
ATTGGTTTGGCGTGGCACAG+AGG	0.649419	4.4:-18775652	None:intergenic
TGAAACCAAATGGAAGACCA+TGG	0.650045	4.4:-18775263	None:intergenic
GATGATGGTGTTAGAAATTG+GGG	0.652352	4.4:+18775555	MS.gene35202:CDS
TCAGTGTTGCGCCTACACCT+CGG	0.653724	4.4:+18776878	MS.gene35202:CDS
ACTGGATTTCACGATCAGCA+AGG	0.672093	4.4:-18775005	None:intergenic
GCTATGGATCGAATCAACCC+TGG	0.674227	4.4:+18775189	MS.gene35202:CDS
TGAAAATTATCATACAACCA+CGG	0.679439	4.4:-18775162	None:intergenic
GTTTCAATTTCACCACAAGG+TGG	0.685119	4.4:+18775113	MS.gene35202:CDS
CAGACAAAGTCAGACCAGCA+AGG	0.687776	4.4:-18774906	None:intergenic
GTGTCCTTGATGAAGGTCCG+TGG	0.705004	4.4:+18775145	MS.gene35202:CDS
TGCCTATATGCGCCTCAGAG+TGG	0.706841	4.4:+18775365	MS.gene35202:CDS
GTAGCCCGAGCACTATAGGA+CGG	0.709360	4.4:-18775920	None:intergenic
TGACATCAATAGCCACTCTG+AGG	0.720871	4.4:-18775377	None:intergenic
GGTACTCTTAAGGCATACGA+TGG	0.724968	4.4:+18775324	MS.gene35202:CDS
CAAAACTAGGAACCACACCA+GGG	0.757716	4.4:-18775206	None:intergenic
TGAGGCGCATATAGGCACTG+TGG	0.760096	4.4:-18775359	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATTTTAAATATGAGAAATT+GGG	+	chr4.4:18775459-18775478	MS.gene35202:CDS	10.0%
!!!	TAATTTTAAATATGAGAAAT+TGG	+	chr4.4:18775458-18775477	MS.gene35202:CDS	10.0%
!!	AGTATTATTTACAAGTTCAA+CGG	-	chr4.4:18776461-18776480	None:intergenic	20.0%
!!!	TGATAATTTTCATATTGCTA+TGG	+	chr4.4:18775173-18775192	MS.gene35202:CDS	20.0%
!	GAACTTGTAAATAATACTCT+TGG	+	chr4.4:18776463-18776482	MS.gene35202:intron	25.0%
!	TATACTTGGTTTAAAAGTCT+TGG	+	chr4.4:18776730-18776749	MS.gene35202:intron	25.0%
!	TGAAAATTATCATACAACCA+CGG	-	chr4.4:18775165-18775184	None:intergenic	25.0%
!!	AAGACTTTTAAACCAAGTAT+AGG	-	chr4.4:18776731-18776750	None:intergenic	25.0%
!!	AGACTTTTAAACCAAGTATA+GGG	-	chr4.4:18776730-18776749	None:intergenic	25.0%
	AAATCACCAAATATACACCA+CGG	-	chr4.4:18776586-18776605	None:intergenic	30.0%
	AATGCAGCATATGCTAAAAA+AGG	+	chr4.4:18775816-18775835	MS.gene35202:CDS	30.0%
	ACATCTTGCTCATCAAAAAA+AGG	-	chr4.4:18776137-18776156	None:intergenic	30.0%
	ATAGGATAATGATCAGAAGT+AGG	-	chr4.4:18776853-18776872	None:intergenic	30.0%
	GATATGGGAAACAATGTAAT+AGG	+	chr4.4:18776062-18776081	MS.gene35202:CDS	30.0%
	GCATATGCTAAAAAAGGTAA+CGG	+	chr4.4:18775822-18775841	MS.gene35202:intron	30.0%
	TAAATAATACTCTTGGCACT+TGG	+	chr4.4:18776470-18776489	MS.gene35202:intron	30.0%
	TAAATGATTCTCCATTCTGA+AGG	-	chr4.4:18776031-18776050	None:intergenic	30.0%
!	AAATAACGAAGAAGTGCATA+AGG	+	chr4.4:18775965-18775984	MS.gene35202:CDS	30.0%
!	AAGTTTTCTAGGTACTCTTA+AGG	+	chr4.4:18775314-18775333	MS.gene35202:CDS	30.0%
!	TTTAGCATATGCTGCATTTT+GGG	-	chr4.4:18775814-18775833	None:intergenic	30.0%
!	TTTTAGCATATGCTGCATTT+TGG	-	chr4.4:18775815-18775834	None:intergenic	30.0%
!	TTTTGATGAGCAAGATGTAA+TGG	+	chr4.4:18776139-18776158	MS.gene35202:intron	30.0%
!!	TCGTTATTTTCAGTCTCAAA+TGG	-	chr4.4:18775954-18775973	None:intergenic	30.0%
!!	TGATGATGGTGTTAGAAATT+GGG	+	chr4.4:18775554-18775573	MS.gene35202:CDS	30.0%
!!!	CTTGAATCACATCGATTTTT+GGG	+	chr4.4:18775233-18775252	MS.gene35202:CDS	30.0%
	AATCACCAAATATACACCAC+GGG	-	chr4.4:18776585-18776604	None:intergenic	35.0%
	AGAATCATTTACTGCTGATG+GGG	+	chr4.4:18776040-18776059	MS.gene35202:CDS	35.0%
	AGAGTCTCAACAATAGCATT+TGG	-	chr4.4:18776823-18776842	None:intergenic	35.0%
	ATACGATCATTGAAGGATGT+CGG	-	chr4.4:18775741-18775760	None:intergenic	35.0%
	ATAGGCACAAATGTTAGTCA+TGG	+	chr4.4:18776080-18776099	MS.gene35202:intron	35.0%
	ATCCTTGAACACTGTTTGAT+AGG	+	chr4.4:18774976-18774995	MS.gene35202:CDS	35.0%
	ATTAGGATAGCCATAATAGC+CGG	-	chr4.4:18776503-18776522	None:intergenic	35.0%
	CCAAAAATCGATGTGATTCA+AGG	-	chr4.4:18775235-18775254	None:intergenic	35.0%
	CTTGTTTCAATTTCACCACA+AGG	+	chr4.4:18775110-18775129	MS.gene35202:CDS	35.0%
	GAAATTGAGTGGAAAGTTGT+CGG	-	chr4.4:18776558-18776577	None:intergenic	35.0%
	GAGAATCATTTACTGCTGAT+GGG	+	chr4.4:18776039-18776058	MS.gene35202:CDS	35.0%
	GAGTCTCACTAAGGAATAAA+AGG	-	chr4.4:18776285-18776304	None:intergenic	35.0%
	GTATAGGGATATCCTTCAAT+CGG	-	chr4.4:18776715-18776734	None:intergenic	35.0%
	GTTACGATCACAAAATCTGT+TGG	+	chr4.4:18775078-18775097	MS.gene35202:CDS	35.0%
	TAGGCACAAATGTTAGTCAT+GGG	+	chr4.4:18776081-18776100	MS.gene35202:intron	35.0%
	TATAGGGATATCCTTCAATC+GGG	-	chr4.4:18776714-18776733	None:intergenic	35.0%
	TATGAATTGGACTCTGATGA+TGG	+	chr4.4:18775540-18775559	MS.gene35202:CDS	35.0%
	TATTATGGCTATCCTAATGG+AGG	+	chr4.4:18776505-18776524	MS.gene35202:intron	35.0%
	TCACTAAGGAATAAAAGGTC+CGG	-	chr4.4:18776280-18776299	None:intergenic	35.0%
	TGATTCAAGGACACAAAACT+AGG	-	chr4.4:18775222-18775241	None:intergenic	35.0%
	TTGAAGGATATCCCTATACT+TGG	+	chr4.4:18776716-18776735	MS.gene35202:intron	35.0%
!	CGGTTCCTTTGAAAAAAGAA+TGG	+	chr4.4:18775400-18775419	MS.gene35202:CDS	35.0%
!	GATAGCAGTATTTTCAGACT+CGG	-	chr4.4:18774959-18774978	None:intergenic	35.0%
!	GATGATGGTGTTAGAAATTG+GGG	+	chr4.4:18775555-18775574	MS.gene35202:CDS	35.0%
!!	CTGATGATGGTGTTAGAAAT+TGG	+	chr4.4:18775553-18775572	MS.gene35202:CDS	35.0%
!!	TGGTGATTTTAACGACATCT+TGG	+	chr4.4:18776597-18776616	MS.gene35202:intron	35.0%
!!!	AATTGGGTGTTTTTTGTCAC+AGG	+	chr4.4:18775475-18775494	MS.gene35202:CDS	35.0%
!!!	ACACGCCATTCTTTTTTCAA+AGG	-	chr4.4:18775408-18775427	None:intergenic	35.0%
!!!	CCTTGAATCACATCGATTTT+TGG	+	chr4.4:18775232-18775251	MS.gene35202:CDS	35.0%
	ACCAGCAAGGTTAAGATTTG+TGG	-	chr4.4:18774896-18774915	None:intergenic	40.0%
	AGGCACAAATGTTAGTCATG+GGG	+	chr4.4:18776082-18776101	MS.gene35202:intron	40.0%
	ATTTACTGCTGATGGGGATA+TGG	+	chr4.4:18776046-18776065	MS.gene35202:CDS	40.0%
	CAACTTTCCACTCAATTTCC+AGG	+	chr4.4:18776559-18776578	MS.gene35202:intron	40.0%
	CAGACCTTAAGTACCTAGTT+CGG	+	chr4.4:18776245-18776264	MS.gene35202:intron	40.0%
	CCAAAATAAAGCTAAACCCC+CGG	-	chr4.4:18776389-18776408	None:intergenic	40.0%
	CCAGCAAGGTTAAGATTTGT+GGG	-	chr4.4:18774895-18774914	None:intergenic	40.0%
	CGAAATCCGTTTATAAGCCA+TGG	-	chr4.4:18776658-18776677	None:intergenic	40.0%
	CTCTTCCTCTACAGGTAATT+CGG	+	chr4.4:18775878-18775897	MS.gene35202:intron	40.0%
	GAAGAACTTCGTTGTTTGCT+TGG	+	chr4.4:18776325-18776344	MS.gene35202:intron	40.0%
	GACCTATCAAACAGTGTTCA+AGG	-	chr4.4:18774981-18775000	None:intergenic	40.0%
	GGAGAATCATTTACTGCTGA+TGG	+	chr4.4:18776038-18776057	MS.gene35202:CDS	40.0%
	GGCTATTATGGCTATCCTAA+TGG	+	chr4.4:18776502-18776521	MS.gene35202:intron	40.0%
	GTACCAATCTTGTGTGAAAC+CGG	-	chr4.4:18775594-18775613	None:intergenic	40.0%
	GTTTCAATTTCACCACAAGG+TGG	+	chr4.4:18775113-18775132	MS.gene35202:CDS	40.0%
	TGAAACCAAATGGAAGACCA+TGG	-	chr4.4:18775266-18775285	None:intergenic	40.0%
	TGCTATTGTTGAGACTCTTG+TGG	+	chr4.4:18776825-18776844	MS.gene35202:intron	40.0%
	TTGTCGGAGAAAATTCCAAG+CGG	-	chr4.4:18776542-18776561	None:intergenic	40.0%
	TTTACTGCTGATGGGGATAT+GGG	+	chr4.4:18776047-18776066	MS.gene35202:CDS	40.0%
!	CAAGGGATAGGAAGTTTTCT+AGG	+	chr4.4:18775303-18775322	MS.gene35202:CDS	40.0%
!	GAAGAAGTGCATAAGGACAT+TGG	+	chr4.4:18775972-18775991	MS.gene35202:CDS	40.0%
!	GCGCACTTGCTAATGATTTA+TGG	+	chr4.4:18776785-18776804	MS.gene35202:intron	40.0%
!	TTAAGGTCTGGAATTGCACT+CGG	-	chr4.4:18776235-18776254	None:intergenic	40.0%
!!	TTGGGTTGGATGAAACCAAA+TGG	-	chr4.4:18775276-18775295	None:intergenic	40.0%
!!!	TATTTTCAGACTCGGTGTCA+AGG	-	chr4.4:18774951-18774970	None:intergenic	40.0%
	ACAAAACTAGGAACCACACC+AGG	-	chr4.4:18775210-18775229	None:intergenic	45.0%
	ACTGGATTTCACGATCAGCA+AGG	-	chr4.4:18775008-18775027	None:intergenic	45.0%
	ATCCAACCCAAAGTAGGTCA+AGG	+	chr4.4:18775285-18775304	MS.gene35202:CDS	45.0%
	ATTGAAGGATGTCGGAGTTC+CGG	-	chr4.4:18775733-18775752	None:intergenic	45.0%
	CAAAACTAGGAACCACACCA+GGG	-	chr4.4:18775209-18775228	None:intergenic	45.0%
	CAAGTCCATGGTCTTCCATT+TGG	+	chr4.4:18775258-18775277	MS.gene35202:CDS	45.0%
	CACAAATGTTAGTCATGGGG+GGG	+	chr4.4:18776085-18776104	MS.gene35202:intron	45.0%
	CAGAGTGGCTATTGATGTCA+CGG	+	chr4.4:18775380-18775399	MS.gene35202:CDS	45.0%
	CCAACTCACTGCTATGAAAC+AGG	+	chr4.4:18775776-18775795	MS.gene35202:CDS	45.0%
	CCCACAAATCTTAACCTTGC+TGG	+	chr4.4:18774892-18774911	MS.gene35202:CDS	45.0%
	CCTATCCCTTGACCTACTTT+GGG	-	chr4.4:18775294-18775313	None:intergenic	45.0%
	CCTGTTTCATAGCAGTGAGT+TGG	-	chr4.4:18775779-18775798	None:intergenic	45.0%
	CGAACTAGGTACTTAAGGTC+TGG	-	chr4.4:18776247-18776266	None:intergenic	45.0%
	CGAATTACCTGTAGAGGAAG+AGG	-	chr4.4:18775880-18775899	None:intergenic	45.0%
	CGCATGTTCAACCTTCAGAA+TGG	+	chr4.4:18776017-18776036	MS.gene35202:CDS	45.0%
	CGCTCTCCATGGCTTATAAA+CGG	+	chr4.4:18776649-18776668	MS.gene35202:intron	45.0%
	CTAAACTCATTTGCCTAGGC+AGG	-	chr4.4:18776183-18776202	None:intergenic	45.0%
	CTTGGACACCAGTGAGAAAA+GGG	+	chr4.4:18776615-18776634	MS.gene35202:intron	45.0%
	GAGTCCAATTCATACAGCTC+CGG	-	chr4.4:18775534-18775553	None:intergenic	45.0%
	GATGAGCAAGATGTAATGGC+AGG	+	chr4.4:18776143-18776162	MS.gene35202:intron	45.0%
	GCACAAATGTTAGTCATGGG+GGG	+	chr4.4:18776084-18776103	MS.gene35202:intron	45.0%
	GCCACTAAACTCATTTGCCT+AGG	-	chr4.4:18776187-18776206	None:intergenic	45.0%
	GCCTAGGCAAATGAGTTTAG+TGG	+	chr4.4:18776183-18776202	MS.gene35202:intron	45.0%
	GGCAAATGAGTTTAGTGGCA+TGG	+	chr4.4:18776188-18776207	MS.gene35202:intron	45.0%
	GGCAAGCATACGATCATTGA+AGG	-	chr4.4:18775748-18775767	None:intergenic	45.0%
	GGCACAAATGTTAGTCATGG+GGG	+	chr4.4:18776083-18776102	MS.gene35202:intron	45.0%
	GGTACTCTTAAGGCATACGA+TGG	+	chr4.4:18775324-18775343	MS.gene35202:CDS	45.0%
	GGTCTGACTTTGTCTGAAGA+GGG	+	chr4.4:18774913-18774932	MS.gene35202:CDS	45.0%
	GGTTTCATCCAACCCAAAGT+AGG	+	chr4.4:18775279-18775298	MS.gene35202:CDS	45.0%
	GTTCGCTGAAATAGGCAAAC+TGG	-	chr4.4:18775026-18775045	None:intergenic	45.0%
	GTTTAGTGGCATGGAATTGC+CGG	+	chr4.4:18776197-18776216	MS.gene35202:intron	45.0%
	TCAGTCTCAAATGGAACAGC+AGG	-	chr4.4:18775945-18775964	None:intergenic	45.0%
	TCCAACCCAAAGTAGGTCAA+GGG	+	chr4.4:18775286-18775305	MS.gene35202:CDS	45.0%
	TCCTATCCCTTGACCTACTT+TGG	-	chr4.4:18775295-18775314	None:intergenic	45.0%
	TCTTGGACACCAGTGAGAAA+AGG	+	chr4.4:18776614-18776633	MS.gene35202:intron	45.0%
	TGACATCAATAGCCACTCTG+AGG	-	chr4.4:18775380-18775399	None:intergenic	45.0%
	TGGTCTGACTTTGTCTGAAG+AGG	+	chr4.4:18774912-18774931	MS.gene35202:CDS	45.0%
	TGTGAGCTAGAGTCTCACTA+AGG	-	chr4.4:18776294-18776313	None:intergenic	45.0%
	TTATCTGACGTCCCGATTGA+AGG	+	chr4.4:18776700-18776719	MS.gene35202:intron	45.0%
	TTGGACACCAGTGAGAAAAG+GGG	+	chr4.4:18776616-18776635	MS.gene35202:intron	45.0%
	TTTAGTGGCATGGAATTGCC+GGG	+	chr4.4:18776198-18776217	MS.gene35202:intron	45.0%
!	AAGCCGGTTTCACACAAGAT+TGG	+	chr4.4:18775588-18775607	MS.gene35202:CDS	45.0%
!	AGTGCATAAGGACATTGGCT+CGG	+	chr4.4:18775977-18775996	MS.gene35202:CDS	45.0%
!	AGTGCCGAACTAGGTACTTA+AGG	-	chr4.4:18776252-18776271	None:intergenic	45.0%
!	GTGATCGTAACCCTTTTGAC+TGG	-	chr4.4:18775069-18775088	None:intergenic	45.0%
!	TAAGGTCTGGAATTGCACTC+GGG	-	chr4.4:18776234-18776253	None:intergenic	45.0%
!	TCTTGTGTGAAACCGGCTTA+AGG	-	chr4.4:18775587-18775606	None:intergenic	45.0%
!	TGTTTTCATGTAGACCGCAC+CGG	+	chr4.4:18776358-18776377	MS.gene35202:intron	45.0%
!!	AGACTCGGTGTCAAGGTTTA+GGG	-	chr4.4:18774944-18774963	None:intergenic	45.0%
!!	TCATAGCAGTGAGTTGGTTC+TGG	-	chr4.4:18775773-18775792	None:intergenic	45.0%
!!	TTGGCTCGGATTTGAAGAAG+AGG	+	chr4.4:18775991-18776010	MS.gene35202:CDS	45.0%
!!!	CCGGGGGTTTAGCTTTATTT+TGG	+	chr4.4:18776386-18776405	MS.gene35202:intron	45.0%
!!!	GATTTTTGGGTGCAAGTCCA+TGG	+	chr4.4:18775246-18775265	MS.gene35202:CDS	45.0%
!!!	GGTGTTTTTTGTCACAGGTG+CGG	+	chr4.4:18775480-18775499	MS.gene35202:CDS	45.0%
	AATGGCAGGTCCTGATGATC+AGG	+	chr4.4:18776157-18776176	MS.gene35202:intron	50.0%
	ACAACCACGGACCTTCATCA+AGG	-	chr4.4:18775152-18775171	None:intergenic	50.0%
	ACGGTCTGGCAGCATATTAG+AGG	-	chr4.4:18775904-18775923	None:intergenic	50.0%
	AGAGGCCGAATTACCTGTAG+AGG	-	chr4.4:18775886-18775905	None:intergenic	50.0%
	CAGACAAAGTCAGACCAGCA+AGG	-	chr4.4:18774909-18774928	None:intergenic	50.0%
	CCCAAAGTAGGTCAAGGGAT+AGG	+	chr4.4:18775291-18775310	MS.gene35202:CDS	50.0%
	CCTAGTTCGGCACTTCAATC+CGG	+	chr4.4:18776258-18776277	MS.gene35202:intron	50.0%
	CGACATGCGTTCGCTGAAAT+AGG	-	chr4.4:18775034-18775053	None:intergenic	50.0%
	CGTCGAGCTGTTCTTGATTC+AGG	+	chr4.4:18776676-18776695	MS.gene35202:intron	50.0%
	CTTGCTTGGTCATACGGACA+AGG	+	chr4.4:18775503-18775522	MS.gene35202:CDS	50.0%
	GATATACCTGCTGCTGGTAC+CGG	+	chr4.4:18775711-18775730	MS.gene35202:CDS	50.0%
	GCTATGGATCGAATCAACCC+TGG	+	chr4.4:18775189-18775208	MS.gene35202:CDS	50.0%
	GCTGTTCTACGACCTCCATT+AGG	-	chr4.4:18776520-18776539	None:intergenic	50.0%
	GGCGCAAATGATGTTCCTGT+TGG	+	chr4.4:18775684-18775703	MS.gene35202:CDS	50.0%
	GGCGCAACACTGACAAGTAT+AGG	-	chr4.4:18776871-18776890	None:intergenic	50.0%
	GTGTCCGGAGCTGTATGAAT+TGG	+	chr4.4:18775527-18775546	MS.gene35202:CDS	50.0%
	TCATACGGACAAGGTGTGTC+CGG	+	chr4.4:18775512-18775531	MS.gene35202:CDS	50.0%
	TCCCTTGACCTACTTTGGGT+TGG	-	chr4.4:18775290-18775309	None:intergenic	50.0%
	TGCCTGGAAGCCAGTCAAAA+GGG	+	chr4.4:18775056-18775075	MS.gene35202:CDS	50.0%
	TGCTTGCAAAGTGCAGCTTC+TGG	+	chr4.4:18775854-18775873	MS.gene35202:intron	50.0%
	TGGACACCAGTGAGAAAAGG+GGG	+	chr4.4:18776617-18776636	MS.gene35202:intron	50.0%
	TGGCGTGTTCGTGCTAGTAA+CGG	+	chr4.4:18775420-18775439	MS.gene35202:CDS	50.0%
	TTAGTGGCATGGAATTGCCG+GGG	+	chr4.4:18776199-18776218	MS.gene35202:intron	50.0%
!	TATAAGCCATGGAGAGCGCA+TGG	-	chr4.4:18776647-18776666	None:intergenic	50.0%
!	TGGCGTCTTACCGGCTATTA+TGG	+	chr4.4:18776490-18776509	MS.gene35202:intron	50.0%
!	TTGAAGCCAGCGATTGGTTG+CGG	-	chr4.4:18775619-18775638	None:intergenic	50.0%
!!	AGCAGTGAGTTGGTTCTGGA+AGG	-	chr4.4:18775769-18775788	None:intergenic	50.0%
!!	CAGACTCGGTGTCAAGGTTT+AGG	-	chr4.4:18774945-18774964	None:intergenic	50.0%
!!!	AACCCTTTTGACTGGCTTCC+AGG	-	chr4.4:18775061-18775080	None:intergenic	50.0%
	AACCTTTCTTCCACCGCACG+CGG	-	chr4.4:18776760-18776779	None:intergenic	55.0%
	ATTTGCGCCACCAGCAGCAT+TGG	-	chr4.4:18775673-18775692	None:intergenic	55.0%
	CAGACCGTCCTATAGTGCTC+GGG	+	chr4.4:18775916-18775935	MS.gene35202:CDS	55.0%
	CCAAATATACACCACGGGCC+TGG	-	chr4.4:18776580-18776599	None:intergenic	55.0%
	CCAGACCGTCCTATAGTGCT+CGG	+	chr4.4:18775915-18775934	MS.gene35202:CDS	55.0%
	CCAGGCCCGTGGTGTATATT+TGG	+	chr4.4:18776577-18776596	MS.gene35202:intron	55.0%
	CTTCTGGCCTCTTCCTCTAC+AGG	+	chr4.4:18775870-18775889	MS.gene35202:intron	55.0%
	CTTGGCACTTGGCGTCTTAC+CGG	+	chr4.4:18776481-18776500	MS.gene35202:intron	55.0%
	GCAGGTATATCGCAGCCAAC+AGG	-	chr4.4:18775702-18775721	None:intergenic	55.0%
	GCGTCTCGTGTCCTTGATGA+AGG	+	chr4.4:18775138-18775157	MS.gene35202:CDS	55.0%
	GGATCGAATCAACCCTGGTG+TGG	+	chr4.4:18775194-18775213	MS.gene35202:CDS	55.0%
	GTAGCCCGAGCACTATAGGA+CGG	-	chr4.4:18775923-18775942	None:intergenic	55.0%
	GTGCCTGGAAGCCAGTCAAA+AGG	+	chr4.4:18775055-18775074	MS.gene35202:CDS	55.0%
	GTGTCCTTGATGAAGGTCCG+TGG	+	chr4.4:18775145-18775164	MS.gene35202:CDS	55.0%
	TCAGTGTTGCGCCTACACCT+CGG	+	chr4.4:18776878-18776897	MS.gene35202:CDS	55.0%
	TGCCTATATGCGCCTCAGAG+TGG	+	chr4.4:18775365-18775384	MS.gene35202:CDS	55.0%
	TTGGGGAGCTGACCTTAAGC+CGG	+	chr4.4:18775572-18775591	MS.gene35202:CDS	55.0%
!	GTGCGGCTTGCTTGGTCATA+CGG	+	chr4.4:18775497-18775516	MS.gene35202:CDS	55.0%
!	TGAGGCGCATATAGGCACTG+TGG	-	chr4.4:18775362-18775381	None:intergenic	55.0%
!!	AGCCACTCTGAGGCGCATAT+AGG	-	chr4.4:18775370-18775389	None:intergenic	55.0%
!!	ATTGGTTTGGCGTGGCACAG+AGG	-	chr4.4:18775655-18775674	None:intergenic	55.0%
!!	CCGGATTGAAGTGCCGAACT+AGG	-	chr4.4:18776261-18776280	None:intergenic	55.0%
	ACCTTTCTTCCACCGCACGC+GGG	-	chr4.4:18776759-18776778	None:intergenic	60.0%
	AGCTAAACCCCCGGCTCTAC+CGG	-	chr4.4:18776380-18776399	None:intergenic	60.0%
	CACGAGACGCATCCACCTTG+TGG	-	chr4.4:18775128-18775147	None:intergenic	60.0%
	CCACGCCAAACCAATGCTGC+TGG	+	chr4.4:18775660-18775679	MS.gene35202:CDS	60.0%
	CCACGGGCCTGGAAATTGAG+TGG	-	chr4.4:18776569-18776588	None:intergenic	60.0%
	CCACTCAATTTCCAGGCCCG+TGG	+	chr4.4:18776566-18776585	MS.gene35202:intron	60.0%
	CCGAGCACTATAGGACGGTC+TGG	-	chr4.4:18775918-18775937	None:intergenic	60.0%
	CCTAGGCAGGCCTGATCATC+AGG	-	chr4.4:18776170-18776189	None:intergenic	60.0%
	CCTGATGATCAGGCCTGCCT+AGG	+	chr4.4:18776167-18776186	MS.gene35202:intron	60.0%
	CGCCAAACCAATGCTGCTGG+TGG	+	chr4.4:18775663-18775682	MS.gene35202:CDS	60.0%
	GAGGTCGTAGAACAGCCGCT+TGG	+	chr4.4:18776524-18776543	MS.gene35202:intron	60.0%
	GCAGGTAGCCCGAGCACTAT+AGG	-	chr4.4:18775927-18775946	None:intergenic	60.0%
	GCATGGAATTGCCGGGGTGT+AGG	+	chr4.4:18776205-18776224	MS.gene35202:intron	60.0%
	GGCTGCGATATACCTGCTGC+TGG	+	chr4.4:18775705-18775724	MS.gene35202:CDS	60.0%
	GGGGTCTTGAAGCCAGCGAT+TGG	-	chr4.4:18775625-18775644	None:intergenic	60.0%
	GTACTGCCGCAACCAATCGC+TGG	+	chr4.4:18775610-18775629	MS.gene35202:CDS	60.0%
	TTTGGCGTGGCACAGAGGCA+GGG	-	chr4.4:18775650-18775669	None:intergenic	60.0%
!	TGTCACAGGTGCGGCTTGCT+TGG	+	chr4.4:18775489-18775508	MS.gene35202:CDS	60.0%
!!	CCAGCAGCATTGGTTTGGCG+TGG	-	chr4.4:18775663-18775682	None:intergenic	60.0%
!!	CGCCACCAGCAGCATTGGTT+TGG	-	chr4.4:18775668-18775687	None:intergenic	60.0%
	AAGTCTTGGCACCCCGCGTG+CGG	+	chr4.4:18776744-18776763	MS.gene35202:intron	65.0%
	CACTCGGGCTACCTACACCC+CGG	-	chr4.4:18776219-18776238	None:intergenic	65.0%
	CCTTTCTTCCACCGCACGCG+GGG	-	chr4.4:18776758-18776777	None:intergenic	65.0%
	CGTGGCACAGAGGCAGGGAT+GGG	-	chr4.4:18775645-18775664	None:intergenic	65.0%
	GGAGTTCCGGTACCAGCAGC+AGG	-	chr4.4:18775720-18775739	None:intergenic	65.0%
	GTGGCACAGAGGCAGGGATG+GGG	-	chr4.4:18775644-18775663	None:intergenic	65.0%
	GTTTGGCGTGGCACAGAGGC+AGG	-	chr4.4:18775651-18775670	None:intergenic	65.0%
!	GGTGCGCCCCCTTTTCTCAC+TGG	-	chr4.4:18776626-18776645	None:intergenic	65.0%
!	GTAGACCGCACCGGTAGAGC+CGG	+	chr4.4:18776367-18776386	MS.gene35202:intron	65.0%
!	TAGACCGCACCGGTAGAGCC+GGG	+	chr4.4:18776368-18776387	MS.gene35202:intron	65.0%
	AACCCCCGGCTCTACCGGTG+CGG	-	chr4.4:18776375-18776394	None:intergenic	70.0%
	CCCCGCGTGCGGTGGAAGAA+AGG	+	chr4.4:18776755-18776774	MS.gene35202:intron	70.0%
	GCGAACGCATGTCGCGTGCC+TGG	+	chr4.4:18775040-18775059	MS.gene35202:CDS	70.0%
	GCGTGGCACAGAGGCAGGGA+TGG	-	chr4.4:18775646-18775665	None:intergenic	70.0%
	GGCGCACCATGCGCTCTCCA+TGG	+	chr4.4:18776638-18776657	MS.gene35202:intron	70.0%
!	AGACCGCACCGGTAGAGCCG+GGG	+	chr4.4:18776369-18776388	MS.gene35202:intron	70.0%
	TCTTGGCACCCCGCGTGCGG+TGG	+	chr4.4:18776747-18776766	MS.gene35202:intron	75.0%
!	GACCGCACCGGTAGAGCCGG+GGG	+	chr4.4:18776370-18776389	MS.gene35202:intron	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	18774886	18776906	18774886	ID=MS.gene35202
chr4.4	mRNA	18774886	18776906	18774886	ID=MS.gene35202.t1;Parent=MS.gene35202
chr4.4	exon	18774886	18775837	18774886	ID=MS.gene35202.t1.exon1;Parent=MS.gene35202.t1
chr4.4	CDS	18774886	18775837	18774886	ID=cds.MS.gene35202.t1;Parent=MS.gene35202.t1
chr4.4	exon	18775892	18776091	18775892	ID=MS.gene35202.t1.exon2;Parent=MS.gene35202.t1
chr4.4	CDS	18775892	18776091	18775892	ID=cds.MS.gene35202.t1;Parent=MS.gene35202.t1
chr4.4	exon	18776838	18776906	18776838	ID=MS.gene35202.t1.exon3;Parent=MS.gene35202.t1
chr4.4	CDS	18776838	18776906	18776838	ID=cds.MS.gene35202.t1;Parent=MS.gene35202.t1

Gene Sequence

>MS.gene35202

ATGGATCCCACAAATCTTAACCTTGCTGGTCTGACTTTGTCTGAAGAGGGTCTAACCCTAAACCTTGACACCGAGTCTGAAAATACTGCTATCCTTGAACACTGTTTGATAGGTCGAGTCCTTGCTGATCGTGAAATCCAGTTTGCCTATTTCAGCGAACGCATGTCGCGTGCCTGGAAGCCAGTCAAAAGGGTTACGATCACAAAATCTGTTGGTGATCGCTTCTTGTTTCAATTTCACCACAAGGTGGATGCGTCTCGTGTCCTTGATGAAGGTCCGTGGTTGTATGATAATTTTCATATTGCTATGGATCGAATCAACCCTGGTGTGGTTCCTAGTTTTGTGTCCTTGAATCACATCGATTTTTGGGTGCAAGTCCATGGTCTTCCATTTGGTTTCATCCAACCCAAAGTAGGTCAAGGGATAGGAAGTTTTCTAGGTACTCTTAAGGCATACGATGGTCGTAACACAATCCACAGTGCCTATATGCGCCTCAGAGTGGCTATTGATGTCACGGTTCCTTTGAAAAAAGAATGGCGTGTTCGTGCTAGTAACGGTGCTTTTGTGACAGTTAATTTTAAATATGAGAAATTGGGTGTTTTTTGTCACAGGTGCGGCTTGCTTGGTCATACGGACAAGGTGTGTCCGGAGCTGTATGAATTGGACTCTGATGATGGTGTTAGAAATTGGGGAGCTGACCTTAAGCCGGTTTCACACAAGATTGGTACTGCCGCAACCAATCGCTGGCTTCAAGACCCCATCCCTGCCTCTGTGCCACGCCAAACCAATGCTGCTGGTGGCGCAAATGATGTTCCTGTTGGCTGCGATATACCTGCTGCTGGTACCGGAACTCCGACATCCTTCAATGATCGTATGCTTGCCTTCCAGAACCAACTCACTGCTATGAAACAGGATGTTATCGCTGCCCAAAATGCAGCATATGCTAAAAAAGGTAACGGTTCTAATTCTGCTTGCAAAGTGCAGCTTCTGGCCTCTTCCTCTACAGGTAATTCGGCCTCTAATATGCTGCCAGACCGTCCTATAGTGCTCGGGCTACCTGCTGTTCCATTTGAGACTGAAAATAACGAAGAAGTGCATAAGGACATTGGCTCGGATTTGAAGAAGAGGAAGCGCATGTTCAACCTTCAGAATGGAGAATCATTTACTGCTGATGGGGATATGGGAAACAATGTAATAGGCACAAATGTTAGTCATGGGGGGGATGCTGAAATGAATGTATTTTCTAATCCTTTTTTTGATGAGCAAGATGTAATGGCAGGTCCTGATGATCAGGCCTGCCTAGGCAAATGAGTTTAGTGGCATGGAATTGCCGGGGTGTAGGTAGCCCGAGTGCAATTCCAGACCTTAAGTACCTAGTTCGGCACTTCAATCCGGACCTTTTATTCCTTAGTGAGACTCTAGCTCACAGAAATAAAATTGAAGAACTTCGTTGTTTGCTTGGTTACGATTCTTGTTTTCATGTAGACCGCACCGGTAGAGCCGGGGGTTTAGCTTTATTTTGGAAAAATTCATTGAATTGTCAACTTATTAATTTTTCAAGTAATCATATTACCGTTGAACTTGTAAATAATACTCTTGGCACTTGGCGTCTTACCGGCTATTATGGCTATCCTAATGGAGGTCGTAGAACAGCCGCTTGGAATTTTCTCCGACAACTTTCCACTCAATTTCCAGGCCCGTGGTGTATATTTGGTGATTTTAACGACATCTTGGACACCAGTGAGAAAAGGGGGCGCACCATGCGCTCTCCATGGCTTATAAACGGATTTCGTCGAGCTGTTCTTGATTCAGGTTTATCTGACGTCCCGATTGAAGGATATCCCTATACTTGGTTTAAAAGTCTTGGCACCCCGCGTGCGGTGGAAGAAAGGTTAGATCGCGCACTTGCTAATGATTTATGGTTTAATATGTTTCCAAATGCTATTGTTGAGACTCTTGTGGCACCTACTTCTGATCATTATCCTATACTTGTCAGTGTTGCGCCTACACCTCGGCCTTAA

Protein sequence

>MS.gene35202.t1

MDPTNLNLAGLTLSEEGLTLNLDTESENTAILEHCLIGRVLADREIQFAYFSERMSRAWKPVKRVTITKSVGDRFLFQFHHKVDASRVLDEGPWLYDNFHIAMDRINPGVVPSFVSLNHIDFWVQVHGLPFGFIQPKVGQGIGSFLGTLKAYDGRNTIHSAYMRLRVAIDVTVPLKKEWRVRASNGAFVTVNFKYEKLGVFCHRCGLLGHTDKVCPELYELDSDDGVRNWGADLKPVSHKIGTAATNRWLQDPIPASVPRQTNAAGGANDVPVGCDIPAAGTGTPTSFNDRMLAFQNQLTAMKQDVIAAQNAAYAKKGNSASNMLPDRPIVLGLPAVPFETENNEEVHKDIGSDLKKRKRMFNLQNGESFTADGDMGNNVIGTNTLVAPTSDHYPILVSVAPTPRP