Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene55209.t1 | XP_024630779.1 | 71 | 338 | 93 | 1 | 1 | 338 | 1 | 333 | 8.60E-137 | 497.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene55209.t1 | A0A2Z6MI92 | 36.0 | 695 | 359 | 7 | 11 | 619 | 7 | 701 | 7.6e-127 | 464.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene55209.t1 | MTR_1g051330 | 69.930 | 286 | 72 | 1 | 335 | 620 | 277 | 548 | 1.14e-137 | 421 |
MS.gene55209.t1 | MTR_1g051330 | 45.161 | 93 | 48 | 1 | 243 | 335 | 15 | 104 | 1.99e-13 | 74.3 |
MS.gene55209.t1 | MTR_0010s0370 | 74.444 | 180 | 46 | 0 | 1 | 180 | 1 | 180 | 5.40e-93 | 286 |
MS.gene55209.t1 | MTR_0010s0350 | 74.444 | 180 | 46 | 0 | 1 | 180 | 1 | 180 | 5.40e-93 | 286 |
MS.gene55209.t1 | MTR_8g463110 | 42.069 | 290 | 163 | 2 | 334 | 620 | 121 | 408 | 3.74e-71 | 243 |
MS.gene55209.t1 | MTR_4g020630 | 40.278 | 288 | 159 | 3 | 336 | 620 | 67 | 344 | 7.36e-64 | 220 |
MS.gene55209.t1 | MTR_1g036720 | 74.775 | 111 | 28 | 0 | 1 | 111 | 1 | 111 | 2.73e-56 | 186 |
MS.gene55209.t1 | MTR_6g046587 | 89.091 | 110 | 12 | 0 | 337 | 446 | 174 | 283 | 4.10e-55 | 189 |
MS.gene55209.t1 | MTR_1g036710 | 43.556 | 225 | 84 | 3 | 132 | 355 | 1 | 183 | 1.00e-46 | 167 |
MS.gene55209.t1 | MTR_1g100687 | 47.059 | 170 | 87 | 2 | 335 | 501 | 58 | 227 | 1.65e-41 | 151 |
MS.gene55209.t1 | MTR_6g034215 | 39.303 | 201 | 99 | 4 | 335 | 532 | 144 | 324 | 1.74e-37 | 142 |
MS.gene55209.t1 | MTR_0042s0130 | 42.353 | 170 | 97 | 1 | 335 | 503 | 161 | 330 | 4.82e-36 | 139 |
MS.gene55209.t1 | MTR_3g044860 | 38.776 | 196 | 89 | 3 | 335 | 527 | 14 | 181 | 6.58e-34 | 132 |
MS.gene55209.t1 | MTR_2g063055 | 52.586 | 116 | 55 | 0 | 445 | 560 | 63 | 178 | 7.60e-34 | 127 |
MS.gene55209.t1 | MTR_6g033215 | 33.143 | 175 | 117 | 0 | 25 | 199 | 120 | 294 | 1.55e-28 | 116 |
MS.gene55209.t1 | MTR_8g019640 | 26.829 | 287 | 122 | 3 | 335 | 620 | 27 | 226 | 1.89e-27 | 115 |
MS.gene55209.t1 | MTR_2g055450 | 37.433 | 187 | 99 | 5 | 336 | 521 | 179 | 348 | 4.18e-27 | 114 |
MS.gene55209.t1 | MTR_8g470880 | 49.533 | 107 | 53 | 1 | 335 | 440 | 417 | 523 | 7.27e-25 | 109 |
MS.gene55209.t1 | MTR_6g009010 | 46.729 | 107 | 56 | 1 | 361 | 466 | 155 | 261 | 8.14e-24 | 102 |
MS.gene55209.t1 | MTR_0114s0080 | 53.750 | 80 | 37 | 0 | 335 | 414 | 45 | 124 | 3.00e-23 | 96.3 |
MS.gene55209.t1 | MTR_2g018005 | 52.874 | 87 | 41 | 0 | 335 | 421 | 144 | 230 | 1.46e-21 | 94.4 |
MS.gene55209.t1 | MTR_7g089990 | 45.370 | 108 | 57 | 1 | 104 | 209 | 86 | 193 | 1.50e-21 | 94.0 |
MS.gene55209.t1 | MTR_6g034715 | 47.126 | 87 | 46 | 0 | 335 | 421 | 50 | 136 | 2.81e-21 | 92.0 |
MS.gene55209.t1 | MTR_3g053920 | 30.952 | 168 | 97 | 3 | 4 | 171 | 8 | 156 | 1.16e-19 | 90.1 |
MS.gene55209.t1 | MTR_2g061500 | 36.364 | 121 | 75 | 1 | 7 | 127 | 11 | 129 | 1.00e-18 | 83.6 |
MS.gene55209.t1 | MTR_4g103530 | 40.449 | 89 | 53 | 0 | 57 | 145 | 5 | 93 | 1.57e-18 | 84.7 |
MS.gene55209.t1 | MTR_4g122570 | 30.732 | 205 | 131 | 4 | 350 | 547 | 328 | 528 | 1.87e-18 | 89.7 |
MS.gene55209.t1 | MTR_6g048560 | 28.037 | 214 | 139 | 5 | 352 | 555 | 33 | 241 | 3.88e-18 | 84.7 |
MS.gene55209.t1 | MTR_6g016175 | 28.926 | 242 | 144 | 10 | 354 | 591 | 164 | 381 | 6.33e-18 | 88.2 |
MS.gene55209.t1 | MTR_7g057470 | 25.962 | 312 | 197 | 10 | 334 | 629 | 356 | 649 | 7.67e-18 | 88.2 |
MS.gene55209.t1 | MTR_7g057490 | 25.962 | 312 | 197 | 10 | 334 | 629 | 356 | 649 | 7.67e-18 | 88.2 |
MS.gene55209.t1 | MTR_5g021380 | 26.316 | 285 | 187 | 8 | 354 | 624 | 671 | 946 | 9.59e-18 | 88.2 |
MS.gene55209.t1 | MTR_3g436680 | 26.724 | 232 | 144 | 4 | 362 | 588 | 1 | 211 | 1.58e-17 | 87.0 |
MS.gene55209.t1 | MTR_3g068195 | 28.395 | 243 | 161 | 6 | 352 | 593 | 19 | 249 | 4.98e-17 | 85.1 |
MS.gene55209.t1 | MTR_7g015270 | 36.508 | 126 | 77 | 2 | 498 | 620 | 67 | 192 | 5.31e-16 | 78.6 |
MS.gene55209.t1 | MTR_8g442690 | 27.615 | 239 | 158 | 6 | 344 | 570 | 99 | 334 | 3.71e-15 | 79.0 |
MS.gene55209.t1 | MTR_0112s0060 | 57.407 | 54 | 23 | 0 | 367 | 420 | 55 | 108 | 1.73e-14 | 70.9 |
MS.gene55209.t1 | MTR_2g078880 | 40.217 | 92 | 39 | 2 | 337 | 427 | 123 | 199 | 5.61e-13 | 68.9 |
MS.gene55209.t1 | MTR_0123s0050 | 56.250 | 48 | 21 | 0 | 368 | 415 | 3 | 50 | 1.17e-12 | 64.3 |
MS.gene55209.t1 | MTR_7g106180 | 27.586 | 145 | 98 | 2 | 34 | 175 | 26 | 166 | 1.23e-12 | 68.6 |
MS.gene55209.t1 | MTR_0111s0070 | 25.418 | 299 | 182 | 9 | 324 | 617 | 262 | 524 | 2.09e-12 | 70.5 |
MS.gene55209.t1 | MTR_8g098280 | 26.761 | 213 | 140 | 4 | 349 | 549 | 162 | 370 | 2.37e-12 | 69.7 |
MS.gene55209.t1 | MTR_7g083690 | 23.549 | 293 | 178 | 8 | 352 | 629 | 770 | 1031 | 2.92e-12 | 70.5 |
MS.gene55209.t1 | MTR_3g024240 | 33.884 | 121 | 78 | 1 | 82 | 200 | 55 | 175 | 2.97e-12 | 66.2 |
MS.gene55209.t1 | MTR_7g063500 | 34.118 | 85 | 56 | 0 | 471 | 555 | 37 | 121 | 5.61e-12 | 63.9 |
MS.gene55209.t1 | MTR_8g468010 | 42.188 | 64 | 36 | 1 | 120 | 182 | 6 | 69 | 1.86e-11 | 62.8 |
MS.gene55209.t1 | MTR_7g033160 | 33.766 | 77 | 48 | 1 | 509 | 582 | 4 | 80 | 1.91e-11 | 60.8 |
MS.gene55209.t1 | MTR_7g011710 | 32.143 | 84 | 57 | 0 | 57 | 140 | 5 | 88 | 3.83e-11 | 62.4 |
MS.gene55209.t1 | MTR_3g026390 | 41.176 | 85 | 46 | 2 | 352 | 435 | 71 | 152 | 5.31e-11 | 62.0 |
MS.gene55209.t1 | MTR_0044s0090 | 25.126 | 199 | 137 | 5 | 360 | 548 | 9 | 205 | 6.44e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene55209.t1 | AT3G31430 | 27.014 | 211 | 141 | 2 | 14 | 215 | 105 | 311 | 3.05e-20 | 93.2 |
MS.gene55209.t1 | AT5G36228 | 23.509 | 285 | 211 | 3 | 3 | 287 | 8 | 285 | 7.35e-19 | 89.4 |
MS.gene55209.t1 | AT2G41590 | 26.415 | 212 | 148 | 2 | 7 | 215 | 12 | 218 | 2.31e-17 | 84.7 |
MS.gene55209.t1 | AT1G43760 | 25.610 | 246 | 172 | 6 | 352 | 588 | 252 | 495 | 4.99e-17 | 85.5 |
MS.gene55209.t1 | AT2G17920 | 26.415 | 212 | 148 | 3 | 7 | 215 | 12 | 218 | 6.44e-17 | 82.4 |
MS.gene55209.t1 | AT5G18636 | 25.472 | 212 | 150 | 2 | 7 | 215 | 12 | 218 | 2.32e-16 | 81.6 |
MS.gene55209.t1 | AT5G25200 | 25.472 | 212 | 150 | 2 | 7 | 215 | 12 | 218 | 2.61e-16 | 81.6 |
MS.gene55209.t1 | AT3G57587 | 26.486 | 185 | 134 | 1 | 31 | 215 | 36 | 218 | 6.98e-16 | 80.5 |
MS.gene55209.t1 | AT2G02103 | 25.000 | 212 | 151 | 2 | 7 | 215 | 12 | 218 | 9.64e-16 | 80.5 |
MS.gene55209.t1 | AT2G13450 | 23.256 | 215 | 157 | 2 | 4 | 215 | 9 | 218 | 7.30e-15 | 77.4 |
MS.gene55209.t1 | AT3G47920 | 29.078 | 141 | 98 | 1 | 75 | 215 | 9 | 147 | 2.90e-13 | 71.6 |
MS.gene55209.t1 | AT5G36225 | 32.222 | 90 | 61 | 0 | 121 | 210 | 17 | 106 | 3.41e-13 | 70.1 |
MS.gene55209.t1 | AT4G02000 | 26.087 | 138 | 94 | 2 | 81 | 215 | 6 | 138 | 8.79e-12 | 67.4 |
Find 153 sgRNAs with CRISPR-Local
Find 534 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCTCCACTTTGTGCCATTC+TGG | 0.101877 | 5.2:+30320738 | MS.gene55209:CDS |
CGCACCATCATTGCATATTA+TGG | 0.112265 | 5.2:-30321287 | None:intergenic |
GCAGAACTGGTGACCTTTAA+TGG | 0.154076 | 5.2:-30321223 | None:intergenic |
TTATTTGATATGCCCCTTAT+TGG | 0.160293 | 5.2:+30322128 | MS.gene55209:CDS |
TACAACTTGTGAAAGAAAAT+TGG | 0.175984 | 5.2:+30322387 | MS.gene55209:CDS |
GGTCACCAGTTCTGCAAATT+TGG | 0.202529 | 5.2:+30321231 | MS.gene55209:CDS |
GCGATTTGGTGACGGAAATT+TGG | 0.207473 | 5.2:-30322491 | None:intergenic |
TGCGTTGTGGTCACCATTTC+GGG | 0.208127 | 5.2:-30322819 | None:intergenic |
TGGAAAAGATTGAAACCTTT+TGG | 0.241030 | 5.2:+30320546 | MS.gene55209:CDS |
AGAAACTAATGCTGAGTTAT+TGG | 0.265031 | 5.2:+30321327 | MS.gene55209:CDS |
TTGCGTTGTGGTCACCATTT+CGG | 0.268985 | 5.2:-30322820 | None:intergenic |
GGCAACGCTCAAAAGTCTTT+TGG | 0.279048 | 5.2:+30322633 | MS.gene55209:CDS |
TCTTGCAAACTTGTTGTTAC+AGG | 0.283113 | 5.2:+30322595 | MS.gene55209:CDS |
TGTTACAGGAAGATAGTTAT+TGG | 0.293464 | 5.2:+30322609 | MS.gene55209:CDS |
TACAATCCATGACAGCGTTT+TGG | 0.294696 | 5.2:-30322103 | None:intergenic |
TAGATAGTTCGAGTTATTCT+TGG | 0.300379 | 5.2:-30320852 | None:intergenic |
AAGAGATGCATTCGGATATA+AGG | 0.312846 | 5.2:-30322240 | None:intergenic |
AGGTGAACTGGTATCCAATA+AGG | 0.321927 | 5.2:-30322142 | None:intergenic |
GCGGTCAAGACGCGCTTCTT+TGG | 0.325096 | 5.2:-30322192 | None:intergenic |
CAGATGATGGCAGTAGACTA+TGG | 0.331341 | 5.2:+30321065 | MS.gene55209:CDS |
CCTCCCATGATGCATGGTTT+TGG | 0.333766 | 5.2:-30326439 | None:intergenic |
AGCAGTAAATGCTCCATTAA+AGG | 0.342514 | 5.2:+30321210 | MS.gene55209:CDS |
ACAACTTGTGAAAGAAAATT+GGG | 0.345031 | 5.2:+30322388 | MS.gene55209:CDS |
CTTAAACCTCTGGACCGTTT+TGG | 0.347317 | 5.2:-30321385 | None:intergenic |
AAAGACATTGGAAGCTTCAT+TGG | 0.382197 | 5.2:+30320809 | MS.gene55209:CDS |
TACGGTGAGGTCTGCGCCAC+GGG | 0.394529 | 5.2:-30322322 | None:intergenic |
GCACCATCATTGCATATTAT+GGG | 0.396422 | 5.2:-30321286 | None:intergenic |
ACTTACCAAATTTGCAGAAC+TGG | 0.402838 | 5.2:-30321236 | None:intergenic |
AACCCTCGTCTCCGTCTTGT+TGG | 0.403299 | 5.2:+30320482 | MS.gene55209:CDS |
GAGTGCGTTGCTTTGCGATT+TGG | 0.409138 | 5.2:-30322505 | None:intergenic |
TGAGTATTCTTTGTAGATCA+AGG | 0.410842 | 5.2:-30320637 | None:intergenic |
CTTTGTGCCATTCTGGATCC+AGG | 0.416259 | 5.2:+30320745 | MS.gene55209:CDS |
ATGAGCCAGGATGGCCGATC+AGG | 0.416849 | 5.2:-30322071 | None:intergenic |
TGAGGTCTGCGCCACGGGAG+AGG | 0.421666 | 5.2:-30322317 | None:intergenic |
TTGGAAACCGCGAATGAGCC+AGG | 0.422501 | 5.2:-30322084 | None:intergenic |
ATGTAGTTTGACTCCCCTCC+AGG | 0.422900 | 5.2:-30320947 | None:intergenic |
TCAATCTACACTGCCCGAAA+TGG | 0.428781 | 5.2:+30322806 | MS.gene55209:CDS |
TTCACAAGTTGTATGAGCTC+AGG | 0.430561 | 5.2:-30322377 | None:intergenic |
CGGTTTCCAAAACGCTGTCA+TGG | 0.438675 | 5.2:+30322097 | MS.gene55209:CDS |
GTGGACCTGATCGGCCATCC+TGG | 0.440540 | 5.2:+30322066 | MS.gene55209:CDS |
GGTGAACTGGTATCCAATAA+GGG | 0.443149 | 5.2:-30322141 | None:intergenic |
ACTTGGTCACGGGGTGATCA+AGG | 0.447169 | 5.2:-30326470 | None:intergenic |
CTGAGAGTCCAAGACAATCT+AGG | 0.447946 | 5.2:-30326369 | None:intergenic |
TTCACCTGGTTTAAAAGCAT+TGG | 0.449021 | 5.2:+30322158 | MS.gene55209:CDS |
GTGTGGGAATGTCATCAGTT+TGG | 0.453016 | 5.2:-30320451 | None:intergenic |
CAGATTCAAGAGGTCGAGCC+AGG | 0.459695 | 5.2:+30320587 | MS.gene55209:CDS |
TTCATCTTCTTCATCACTCA+TGG | 0.462240 | 5.2:-30320420 | None:intergenic |
TGCCTTTCAATACGCAGCTC+TGG | 0.463087 | 5.2:-30321091 | None:intergenic |
CAGGTGCACGATATTCCAAT+AGG | 0.463925 | 5.2:+30320764 | MS.gene55209:CDS |
GTAGCCATGCGTTGTTAAAA+CGG | 0.467574 | 5.2:-30322349 | None:intergenic |
TGATTGGGTAGACAGTTGTC+AGG | 0.475589 | 5.2:-30320710 | None:intergenic |
TCTCACAGTAGTCCTCGATA+TGG | 0.478233 | 5.2:-30321024 | None:intergenic |
TGCATCTCTTCAAACATTAG+TGG | 0.483607 | 5.2:+30322253 | MS.gene55209:CDS |
AATTGAAATGTATATAATCC+TGG | 0.484394 | 5.2:-30320605 | None:intergenic |
GCACACCGGCAGGCTGATCA+TGG | 0.491870 | 5.2:+30321136 | MS.gene55209:CDS |
AAAGTGGAGGGAGACTTGAT+TGG | 0.492759 | 5.2:-30320726 | None:intergenic |
GAGGTCTGCGCCACGGGAGA+GGG | 0.495425 | 5.2:-30322316 | None:intergenic |
TTGAATTCGGACACAGTGAA+TGG | 0.497398 | 5.2:-30322899 | None:intergenic |
TCATCTCATGTGTGCAAGCA+AGG | 0.501791 | 5.2:+30322843 | MS.gene55209:CDS |
AATGTTTGAAGAGATGCATT+CGG | 0.506948 | 5.2:-30322248 | None:intergenic |
TTCATGCCACAGCTTCAGCC+AGG | 0.508766 | 5.2:+30322687 | MS.gene55209:CDS |
AGATGATGGCAGTAGACTAT+GGG | 0.509673 | 5.2:+30321066 | MS.gene55209:CDS |
CGGCCATCCTGGCTCATTCG+CGG | 0.511923 | 5.2:+30322077 | MS.gene55209:CDS |
CGAGGGTTTGCTGTTTGTGT+GGG | 0.514055 | 5.2:-30320467 | None:intergenic |
CTGCCAAAACCATGCATCAT+GGG | 0.514175 | 5.2:+30326436 | MS.gene55209:CDS |
CTATTGGAATATCGTGCACC+TGG | 0.515535 | 5.2:-30320763 | None:intergenic |
CTGTGAGAAGCTATACTCAA+TGG | 0.518926 | 5.2:+30321039 | MS.gene55209:CDS |
CGACCAACAAGACGGAGACG+AGG | 0.523371 | 5.2:-30320485 | None:intergenic |
AATCCGCTCCTATATGATGA+TGG | 0.529678 | 5.2:+30320526 | MS.gene55209:CDS |
CAGAGATCAACTAGAGGTGG+GGG | 0.531218 | 5.2:+30321112 | MS.gene55209:CDS |
ACTGCCAAAACCATGCATCA+TGG | 0.531462 | 5.2:+30326435 | MS.gene55209:CDS |
TTATTGGATACCAGTTCACC+TGG | 0.531674 | 5.2:+30322144 | MS.gene55209:CDS |
AACCATGCATCATGGGAGGT+TGG | 0.532651 | 5.2:+30326443 | MS.gene55209:CDS |
CAGGACTCTAATACGCATGT+AGG | 0.539136 | 5.2:-30320879 | None:intergenic |
TAATGCTGAGTTATTGGATG+AGG | 0.540256 | 5.2:+30321333 | MS.gene55209:CDS |
ACGAGGGTTTGCTGTTTGTG+TGG | 0.540778 | 5.2:-30320468 | None:intergenic |
AAGTGGAGGGAGACTTGATT+GGG | 0.545801 | 5.2:-30320725 | None:intergenic |
CTTTCATCTGTAACTGTCGC+CGG | 0.549049 | 5.2:-30321175 | None:intergenic |
GTGACTAGCCTAGATTGTCT+TGG | 0.550902 | 5.2:+30326361 | MS.gene55209:CDS |
ATTCGGATATAAGGTTTGCC+AGG | 0.554830 | 5.2:-30322231 | None:intergenic |
GGCAGAGATCAACTAGAGGT+GGG | 0.557226 | 5.2:+30321110 | MS.gene55209:CDS |
GTGGCTTTGTGACATCGAGC+AGG | 0.557601 | 5.2:-30320898 | None:intergenic |
TGCGAGATTCCTCAGGTACA+TGG | 0.557823 | 5.2:+30322735 | MS.gene55209:CDS |
CGCCCCATAATATGCAATGA+TGG | 0.561164 | 5.2:+30321283 | MS.gene55209:CDS |
AGCGGATTGGTCGGTTTGTG+AGG | 0.562109 | 5.2:-30320511 | None:intergenic |
ACAAGCGTGGTGGACCTGAT+CGG | 0.562408 | 5.2:+30322057 | MS.gene55209:CDS |
GACCAGAGCTGCGTATTGAA+AGG | 0.564531 | 5.2:+30321089 | MS.gene55209:CDS |
TACTCAATGGAATCAGATGA+TGG | 0.564536 | 5.2:+30321052 | MS.gene55209:CDS |
GCGCCCTTGTCACATCATCC+TGG | 0.565560 | 5.2:+30322213 | MS.gene55209:CDS |
TACAGGAAGATAGTTATTGG+AGG | 0.566080 | 5.2:+30322612 | MS.gene55209:CDS |
GCAGAGATCAACTAGAGGTG+GGG | 0.567365 | 5.2:+30321111 | MS.gene55209:CDS |
CTTGGTCACGGGGTGATCAA+GGG | 0.567542 | 5.2:-30326469 | None:intergenic |
TCGTGCACCTGGATCCAGAA+TGG | 0.569519 | 5.2:-30320752 | None:intergenic |
TGGTGTTGCAGTTCACTCGC+CGG | 0.570229 | 5.2:+30321156 | MS.gene55209:CDS |
CACCATCATTGCATATTATG+GGG | 0.574655 | 5.2:-30321285 | None:intergenic |
AGGCAGAGATCAACTAGAGG+TGG | 0.575202 | 5.2:+30321109 | MS.gene55209:CDS |
TCCAGAATGGCACAAAGTGG+AGG | 0.576232 | 5.2:-30320739 | None:intergenic |
GTTGCTTTGCGATTTGGTGA+CGG | 0.578464 | 5.2:-30322499 | None:intergenic |
GCATAGAAGACATCTCTGCT+TGG | 0.579324 | 5.2:+30322453 | MS.gene55209:CDS |
CAATCTAGGCTAGTCACCGT+GGG | 0.584255 | 5.2:-30326355 | None:intergenic |
AAACCGCGAATGAGCCAGGA+TGG | 0.585566 | 5.2:-30322080 | None:intergenic |
GGAGAGGGTCAAGTTGCAGT+AGG | 0.588610 | 5.2:-30322301 | None:intergenic |
CTACGGTGAGGTCTGCGCCA+CGG | 0.590230 | 5.2:-30322323 | None:intergenic |
AGCCAACCTCCCATGATGCA+TGG | 0.591810 | 5.2:-30326445 | None:intergenic |
TTTGTAATGATGCTTGAAGA+CGG | 0.592382 | 5.2:-30322419 | None:intergenic |
CGTTGTTAAAACGGAAACTA+CGG | 0.592935 | 5.2:-30322340 | None:intergenic |
TTATATCTACCAAACCAAAA+CGG | 0.594407 | 5.2:+30321371 | MS.gene55209:CDS |
CAACACCATGATCAGCCTGC+CGG | 0.595009 | 5.2:-30321141 | None:intergenic |
GGGTCAAGTTGCAGTAGGAG+TGG | 0.601150 | 5.2:-30322296 | None:intergenic |
AGATTCAAGTACGAGCGGCT+AGG | 0.601706 | 5.2:+30320971 | MS.gene55209:CDS |
ATCATCATATAGGAGCGGAT+TGG | 0.602345 | 5.2:-30320524 | None:intergenic |
GACCAACAAGACGGAGACGA+GGG | 0.604783 | 5.2:-30320484 | None:intergenic |
CATCTCATGTGTGCAAGCAA+GGG | 0.604875 | 5.2:+30322844 | MS.gene55209:CDS |
AGGACTCTAATACGCATGTA+GGG | 0.606368 | 5.2:-30320878 | None:intergenic |
AGGATGATGTGACAAGGGCG+CGG | 0.609843 | 5.2:-30322211 | None:intergenic |
CCAGAATGGCACAAAGTGGA+GGG | 0.610223 | 5.2:-30320738 | None:intergenic |
GATTGGGTAGACAGTTGTCA+GGG | 0.612240 | 5.2:-30320709 | None:intergenic |
TGCAACTTGACCCTCTCCCG+TGG | 0.614706 | 5.2:+30322306 | MS.gene55209:CDS |
TCATATAGGAGCGGATTGGT+CGG | 0.615709 | 5.2:-30320520 | None:intergenic |
CAAAACTGTACAGATTCAAG+AGG | 0.616948 | 5.2:+30320577 | MS.gene55209:CDS |
ACACAGTGAATGGTTGAATG+AGG | 0.617411 | 5.2:-30322889 | None:intergenic |
ACAATCTAGGCTAGTCACCG+TGG | 0.618657 | 5.2:-30326356 | None:intergenic |
CATAATATGCAATGATGGTG+CGG | 0.626746 | 5.2:+30321288 | MS.gene55209:CDS |
ATTATGGGGCGCATCAAGTG+AGG | 0.628501 | 5.2:-30321271 | None:intergenic |
GTGAACTGGTATCCAATAAG+GGG | 0.631495 | 5.2:-30322140 | None:intergenic |
GGATCCAGAATGGCACAAAG+TGG | 0.642199 | 5.2:-30320742 | None:intergenic |
TTACATCTAGAATCAAGAGA+TGG | 0.647013 | 5.2:-30320685 | None:intergenic |
AGTGGCGTGTGATCTGAGAC+TGG | 0.648713 | 5.2:-30322278 | None:intergenic |
TTTCCATCATCATATAGGAG+CGG | 0.648982 | 5.2:-30320529 | None:intergenic |
ACAGAGTTCATCGTGAGCCG+TGG | 0.650937 | 5.2:-30322759 | None:intergenic |
AGCCGTGGTCCATGTACCTG+AGG | 0.654985 | 5.2:-30322744 | None:intergenic |
ACCAAACCAAAACGGTCCAG+AGG | 0.657642 | 5.2:+30321379 | MS.gene55209:CDS |
CACAGTGAATGGTTGAATGA+GGG | 0.659078 | 5.2:-30322888 | None:intergenic |
TGGTTTGGTAGATATAATTG+CGG | 0.659501 | 5.2:-30321365 | None:intergenic |
CAACTTGTGAAAGAAAATTG+GGG | 0.663608 | 5.2:+30322389 | MS.gene55209:CDS |
TGAGGAAACGACCAACAAGA+CGG | 0.663713 | 5.2:-30320493 | None:intergenic |
TCAGCATCTGACAAGCGTGG+TGG | 0.664399 | 5.2:+30322047 | MS.gene55209:intron |
AGATGGTTGTCAAAGTACCA+TGG | 0.664762 | 5.2:-30320668 | None:intergenic |
TTTGCCAGGATGATGTGACA+AGG | 0.667189 | 5.2:-30322217 | None:intergenic |
CCAAAACCATGCATCATGGG+AGG | 0.673263 | 5.2:+30326439 | MS.gene55209:CDS |
CGGCATGCTAGGCCATATCG+AGG | 0.675861 | 5.2:+30321012 | MS.gene55209:CDS |
TTGCCAGGATGATGTGACAA+GGG | 0.682637 | 5.2:-30322216 | None:intergenic |
CTTTCAGCATCTGACAAGCG+TGG | 0.688871 | 5.2:+30322044 | MS.gene55209:intron |
TTCCTCAGGTACATGGACCA+CGG | 0.689293 | 5.2:+30322742 | MS.gene55209:CDS |
GTACATATTACTTGGTCACG+GGG | 0.691911 | 5.2:-30326479 | None:intergenic |
ACATCAGATTCAAGTACGAG+CGG | 0.696019 | 5.2:+30320966 | MS.gene55209:CDS |
CACATGAGATGATTGCGTTG+TGG | 0.708060 | 5.2:-30322832 | None:intergenic |
GATGATGGCAGTAGACTATG+GGG | 0.708912 | 5.2:+30321067 | MS.gene55209:CDS |
ATCTAGGCTAGTCACCGTGG+GGG | 0.709056 | 5.2:-30326353 | None:intergenic |
AATCTAGGCTAGTCACCGTG+GGG | 0.709173 | 5.2:-30326354 | None:intergenic |
GAAAGGCAGAGATCAACTAG+AGG | 0.714021 | 5.2:+30321106 | MS.gene55209:CDS |
GTATTCTTTGTAGATCAAGG+TGG | 0.736211 | 5.2:-30320634 | None:intergenic |
TTAAAACGGAAACTACGGTG+AGG | 0.749287 | 5.2:-30322335 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGATAAATTAATGTAGTTTT+GGG | - | chr5.2:30321874-30321893 | None:intergenic | 15.0% |
!!! | TTGATAAATTAATGTAGTTT+TGG | - | chr5.2:30321875-30321894 | None:intergenic | 15.0% |
!! | AAAAATGACATGATATTCAA+CGG | - | chr5.2:30323458-30323477 | None:intergenic | 20.0% |
!! | AACATATGCATTAGATTAAT+AGG | - | chr5.2:30326195-30326214 | None:intergenic | 20.0% |
!! | AATAGGTGTTAGAAAATTTA+AGG | - | chr5.2:30326178-30326197 | None:intergenic | 20.0% |
!! | AATGTTTGTGTTAACAATAT+AGG | - | chr5.2:30326089-30326108 | None:intergenic | 20.0% |
!! | AATTGAAATGTATATAATCC+TGG | - | chr5.2:30320608-30320627 | None:intergenic | 20.0% |
!! | ATAAAAAATCATGAATTACG+AGG | + | chr5.2:30323583-30323602 | MS.gene55209:intron | 20.0% |
!! | ATAGGTGTTAGAAAATTTAA+GGG | - | chr5.2:30326177-30326196 | None:intergenic | 20.0% |
!! | ATATTAGTAACATTCAAATC+TGG | - | chr5.2:30323067-30323086 | None:intergenic | 20.0% |
!! | ATGGTACATCATAAAAAATA+TGG | - | chr5.2:30325634-30325653 | None:intergenic | 20.0% |
!! | CTACATTAATTTATCAATTC+AGG | + | chr5.2:30321878-30321897 | MS.gene55209:intron | 20.0% |
!! | CTGCTAAATTAGTAATATAA+AGG | - | chr5.2:30325963-30325982 | None:intergenic | 20.0% |
!! | TAAAAAAGAATTTGACGATT+TGG | - | chr5.2:30321566-30321585 | None:intergenic | 20.0% |
!! | TAATAGTTTGACATTACAAA+AGG | - | chr5.2:30326011-30326030 | None:intergenic | 20.0% |
!! | TGCAATATAATAAAACCTAA+TGG | - | chr5.2:30325987-30326006 | None:intergenic | 20.0% |
!! | TGGTACATCATAAAAAATAT+GGG | - | chr5.2:30325633-30325652 | None:intergenic | 20.0% |
!!! | AATGACATTTTTTCCAAATA+CGG | - | chr5.2:30323933-30323952 | None:intergenic | 20.0% |
!!! | ATCGTCAAATTCTTTTTTAT+TGG | + | chr5.2:30321567-30321586 | MS.gene55209:intron | 20.0% |
!!! | GAATATCATGTCATTTTTAA+CGG | + | chr5.2:30323460-30323479 | MS.gene55209:intron | 20.0% |
!!! | GATTGTATTTTTATTTTTCC+TGG | - | chr5.2:30322708-30322727 | None:intergenic | 20.0% |
! | AACTAAGAGACTAACAAAAA+TGG | - | chr5.2:30325816-30325835 | None:intergenic | 25.0% |
! | ACAACTTGTGAAAGAAAATT+GGG | + | chr5.2:30322388-30322407 | MS.gene55209:CDS | 25.0% |
! | ACATATAATATAGAGGTAAG+GGG | - | chr5.2:30323542-30323561 | None:intergenic | 25.0% |
! | ATTAATGTGGCAATATCAAA+CGG | + | chr5.2:30325398-30325417 | MS.gene55209:intron | 25.0% |
! | ATTGGAAGTGGTAAATATTT+GGG | + | chr5.2:30323853-30323872 | MS.gene55209:intron | 25.0% |
! | CACATATAATATAGAGGTAA+GGG | - | chr5.2:30323543-30323562 | None:intergenic | 25.0% |
! | CTACAAAGAATACTCAAAAA+AGG | + | chr5.2:30320644-30320663 | MS.gene55209:CDS | 25.0% |
! | CTTTCTTAATAAGATTGATG+CGG | - | chr5.2:30324818-30324837 | None:intergenic | 25.0% |
! | GAAATCCACTTGTTTATTAA+AGG | - | chr5.2:30323202-30323221 | None:intergenic | 25.0% |
! | GGTACATCATAAAAAATATG+GGG | - | chr5.2:30325632-30325651 | None:intergenic | 25.0% |
! | GTACATCATAAAAAATATGG+GGG | - | chr5.2:30325631-30325650 | None:intergenic | 25.0% |
! | GTGAAATTAATGAAATGGAA+TGG | - | chr5.2:30326270-30326289 | None:intergenic | 25.0% |
! | TAATAGCTTGACATTTCAAA+AGG | - | chr5.2:30325775-30325794 | None:intergenic | 25.0% |
! | TACAACTTGTGAAAGAAAAT+TGG | + | chr5.2:30322387-30322406 | MS.gene55209:CDS | 25.0% |
! | TTATATCTACCAAACCAAAA+CGG | + | chr5.2:30321371-30321390 | MS.gene55209:CDS | 25.0% |
! | TTCAACAACAATACAATGAT+GGG | + | chr5.2:30325263-30325282 | MS.gene55209:intron | 25.0% |
! | TTGGTGTGAAATTAATGAAA+TGG | - | chr5.2:30326275-30326294 | None:intergenic | 25.0% |
! | TTTCTTAATAAGATTGATGC+GGG | - | chr5.2:30324817-30324836 | None:intergenic | 25.0% |
! | TTTGCTAGAATCTATTAATG+TGG | + | chr5.2:30325385-30325404 | MS.gene55209:intron | 25.0% |
! | TTTGGAAAAAATGTCATTCT+TGG | + | chr5.2:30323935-30323954 | MS.gene55209:intron | 25.0% |
!! | AATCTTTTCCATCATCATAT+AGG | - | chr5.2:30320537-30320556 | None:intergenic | 25.0% |
!! | ATGATGAACTCATTTTATTG+GGG | + | chr5.2:30324081-30324100 | MS.gene55209:intron | 25.0% |
!! | GATGATGAACTCATTTTATT+GGG | + | chr5.2:30324080-30324099 | MS.gene55209:intron | 25.0% |
!!! | AAGTTTTGAGCTTAAGTTAT+TGG | + | chr5.2:30325936-30325955 | MS.gene55209:intron | 25.0% |
AAAAATACTAAGCTAGCAGT+TGG | + | chr5.2:30325722-30325741 | MS.gene55209:intron | 30.0% | |
AAAACCCATCTTACAAAGTA+TGG | - | chr5.2:30323395-30323414 | None:intergenic | 30.0% | |
AAAAGATCAGAGGTTCAATA+CGG | + | chr5.2:30325175-30325194 | MS.gene55209:intron | 30.0% | |
AACGACAGAAAAAAATCAAG+AGG | + | chr5.2:30320924-30320943 | MS.gene55209:CDS | 30.0% | |
AATGTTTGAAGAGATGCATT+CGG | - | chr5.2:30322251-30322270 | None:intergenic | 30.0% | |
AATTCATTGGTAGGAACAAT+TGG | - | chr5.2:30325482-30325501 | None:intergenic | 30.0% | |
ACTACTATTTCAAACTCTCT+TGG | + | chr5.2:30323817-30323836 | MS.gene55209:intron | 30.0% | |
AGAAACTAATGCTGAGTTAT+TGG | + | chr5.2:30321327-30321346 | MS.gene55209:CDS | 30.0% | |
AGCATCTGAAGAATTGAAAA+TGG | - | chr5.2:30324562-30324581 | None:intergenic | 30.0% | |
ATACACTTTCTAATGATCCT+TGG | + | chr5.2:30321994-30322013 | MS.gene55209:intron | 30.0% | |
ATTGTTCCTACCAATGAATT+TGG | + | chr5.2:30325482-30325501 | MS.gene55209:intron | 30.0% | |
CAACTTGTGAAAGAAAATTG+GGG | + | chr5.2:30322389-30322408 | MS.gene55209:CDS | 30.0% | |
CAGAATTTCTGATAAAAAGC+CGG | - | chr5.2:30322980-30322999 | None:intergenic | 30.0% | |
CATTCACTAGAGTTTCAATA+AGG | - | chr5.2:30321722-30321741 | None:intergenic | 30.0% | |
CATTGGAAGTGGTAAATATT+TGG | + | chr5.2:30323852-30323871 | MS.gene55209:intron | 30.0% | |
CGCATCAATCTTATTAAGAA+AGG | + | chr5.2:30324816-30324835 | MS.gene55209:intron | 30.0% | |
CTCTATATTATATGTGCAGA+AGG | + | chr5.2:30323547-30323566 | MS.gene55209:intron | 30.0% | |
CTTATTGAAACTCTAGTGAA+TGG | + | chr5.2:30321720-30321739 | MS.gene55209:intron | 30.0% | |
CTTCTGCACATATAATATAG+AGG | - | chr5.2:30323549-30323568 | None:intergenic | 30.0% | |
GAAATAGTAGTGATATCATC+TGG | - | chr5.2:30323808-30323827 | None:intergenic | 30.0% | |
GAATATAGCTTCCTTGAATT+CGG | - | chr5.2:30322915-30322934 | None:intergenic | 30.0% | |
GAATTACGAGGTAAAATTCA+CGG | + | chr5.2:30323595-30323614 | MS.gene55209:intron | 30.0% | |
GCACATATAATATAGAGGTA+AGG | - | chr5.2:30323544-30323563 | None:intergenic | 30.0% | |
GCGAAATGAACATTATATCT+TGG | + | chr5.2:30321616-30321635 | MS.gene55209:intron | 30.0% | |
GTTCAACAACAATACAATGA+TGG | + | chr5.2:30325262-30325281 | MS.gene55209:intron | 30.0% | |
TACTAATTTAGCAGTCCATT+AGG | + | chr5.2:30325969-30325988 | MS.gene55209:intron | 30.0% | |
TCAATAAGGATTACAATGTC+CGG | - | chr5.2:30321708-30321727 | None:intergenic | 30.0% | |
TCTGACTTATGTTACAACAT+CGG | + | chr5.2:30321753-30321772 | MS.gene55209:intron | 30.0% | |
TCTGGTCAAGCAATTAATTA+TGG | + | chr5.2:30323748-30323767 | MS.gene55209:intron | 30.0% | |
TGAGTATTCTTTGTAGATCA+AGG | - | chr5.2:30320640-30320659 | None:intergenic | 30.0% | |
TGCAAATCAAAAGGTAAAGT+TGG | + | chr5.2:30323304-30323323 | MS.gene55209:intron | 30.0% | |
TGTTACAGGAAGATAGTTAT+TGG | + | chr5.2:30322609-30322628 | MS.gene55209:CDS | 30.0% | |
TTAGTAACATTCAAATCTGG+TGG | - | chr5.2:30323064-30323083 | None:intergenic | 30.0% | |
TTATTTGATATGCCCCTTAT+TGG | + | chr5.2:30322128-30322147 | MS.gene55209:CDS | 30.0% | |
TTCGACCTTTAATAAACAAG+TGG | + | chr5.2:30323194-30323213 | MS.gene55209:intron | 30.0% | |
TTTGTAATGATGCTTGAAGA+CGG | - | chr5.2:30322422-30322441 | None:intergenic | 30.0% | |
! | AACAATACAATGATGGGATA+TGG | + | chr5.2:30325269-30325288 | MS.gene55209:intron | 30.0% |
! | ATTTGGAATACTACGATTGA+TGG | + | chr5.2:30324633-30324652 | MS.gene55209:intron | 30.0% |
! | CAGCTTTTATATGGTAAATC+TGG | + | chr5.2:30325317-30325336 | MS.gene55209:intron | 30.0% |
! | CATAAACAAAGAGTACATAG+TGG | - | chr5.2:30325657-30325676 | None:intergenic | 30.0% |
! | GATCATTAGAAAGTGTATTG+AGG | - | chr5.2:30321992-30322011 | None:intergenic | 30.0% |
! | GGATGATGAACTCATTTTAT+TGG | + | chr5.2:30324079-30324098 | MS.gene55209:intron | 30.0% |
! | TAGAAAGTGTATTGAGGTAT+CGG | - | chr5.2:30321986-30322005 | None:intergenic | 30.0% |
! | TAGATAGTTCGAGTTATTCT+TGG | - | chr5.2:30320855-30320874 | None:intergenic | 30.0% |
! | TGGAAAAGATTGAAACCTTT+TGG | + | chr5.2:30320546-30320565 | MS.gene55209:CDS | 30.0% |
! | TTACATCTAGAATCAAGAGA+TGG | - | chr5.2:30320688-30320707 | None:intergenic | 30.0% |
! | TTTTCTGTCATGTATCCTAT+TGG | - | chr5.2:30320782-30320801 | None:intergenic | 30.0% |
!! | TGGTTTGGTAGATATAATTG+CGG | - | chr5.2:30321368-30321387 | None:intergenic | 30.0% |
!! | TTCTAAAGCTACAGAATGTT+GGG | + | chr5.2:30324911-30324930 | MS.gene55209:intron | 30.0% |
!!! | ATGTGCTTTAGAGACTTTTT+CGG | + | chr5.2:30325293-30325312 | MS.gene55209:intron | 30.0% |
!!! | ATTTTTTTCTGTCGTTTCAG+TGG | - | chr5.2:30320920-30320939 | None:intergenic | 30.0% |
AAAATTTAAGGGTGAGTGAG+TGG | - | chr5.2:30326166-30326185 | None:intergenic | 35.0% | |
AAAGACATTGGAAGCTTCAT+TGG | + | chr5.2:30320809-30320828 | MS.gene55209:CDS | 35.0% | |
AAGAGATGCATTCGGATATA+AGG | - | chr5.2:30322243-30322262 | None:intergenic | 35.0% | |
AAGCACTTTCATAATGAGAG+AGG | - | chr5.2:30323729-30323748 | None:intergenic | 35.0% | |
AATATCATCCTAGCTCCTAA+AGG | + | chr5.2:30323082-30323101 | MS.gene55209:intron | 35.0% | |
AATATGCGCTGCAAATCAAA+AGG | + | chr5.2:30323295-30323314 | MS.gene55209:intron | 35.0% | |
AATGAGAGAGGATATCTTTG+AGG | - | chr5.2:30323717-30323736 | None:intergenic | 35.0% | |
ACCCAACCTTTACTTACTTT+GGG | + | chr5.2:30324363-30324382 | MS.gene55209:intron | 35.0% | |
ACTTACCAAATTTGCAGAAC+TGG | - | chr5.2:30321239-30321258 | None:intergenic | 35.0% | |
AGAGACTAACAAAAATGGCT+AGG | - | chr5.2:30325811-30325830 | None:intergenic | 35.0% | |
AGCAGTAAATGCTCCATTAA+AGG | + | chr5.2:30321210-30321229 | MS.gene55209:CDS | 35.0% | |
AGCTATTCCCTCTTATTGTA+TGG | + | chr5.2:30324014-30324033 | MS.gene55209:intron | 35.0% | |
AGGAACAATTGGTGAATAGA+GGG | - | chr5.2:30325471-30325490 | None:intergenic | 35.0% | |
AGGATACATGACAGAAAAAG+TGG | + | chr5.2:30320784-30320803 | MS.gene55209:CDS | 35.0% | |
ATCATAAAAAATATGGGGGC+TGG | - | chr5.2:30325627-30325646 | None:intergenic | 35.0% | |
ATCATTAGCACTTAAACCTC+TGG | - | chr5.2:30321398-30321417 | None:intergenic | 35.0% | |
ATGGTTCGAAAGTTAATGTG+TGG | + | chr5.2:30324406-30324425 | MS.gene55209:intron | 35.0% | |
ATTATATCTTGGAACTGTCG+AGG | + | chr5.2:30321627-30321646 | MS.gene55209:intron | 35.0% | |
CAAAACTGTACAGATTCAAG+AGG | + | chr5.2:30320577-30320596 | MS.gene55209:CDS | 35.0% | |
CAAGCCATACTTTGTAAGAT+GGG | + | chr5.2:30323388-30323407 | MS.gene55209:intron | 35.0% | |
CACCATCATTGCATATTATG+GGG | - | chr5.2:30321288-30321307 | None:intergenic | 35.0% | |
CGTTGTTAAAACGGAAACTA+CGG | - | chr5.2:30322343-30322362 | None:intergenic | 35.0% | |
CTTACTCTTCACAAAAGTCT+TGG | + | chr5.2:30324153-30324172 | MS.gene55209:intron | 35.0% | |
GAATACTCAAAAAAGGTCCA+TGG | + | chr5.2:30320651-30320670 | MS.gene55209:CDS | 35.0% | |
GAGAATTTCAAATGCCGTTA+AGG | - | chr5.2:30323272-30323291 | None:intergenic | 35.0% | |
GAGACTAACAAAAATGGCTA+GGG | - | chr5.2:30325810-30325829 | None:intergenic | 35.0% | |
GATACATGACAGAAAAAGTG+GGG | + | chr5.2:30320786-30320805 | MS.gene55209:CDS | 35.0% | |
GATATAATGTTCATTTCGCC+TGG | - | chr5.2:30321615-30321634 | None:intergenic | 35.0% | |
GCACCATCATTGCATATTAT+GGG | - | chr5.2:30321289-30321308 | None:intergenic | 35.0% | |
GCTATTCCCTCTTATTGTAT+GGG | + | chr5.2:30324015-30324034 | MS.gene55209:intron | 35.0% | |
GGAGAGAAGATATTCGTATT+TGG | + | chr5.2:30324616-30324635 | MS.gene55209:intron | 35.0% | |
GGATACATGACAGAAAAAGT+GGG | + | chr5.2:30320785-30320804 | MS.gene55209:CDS | 35.0% | |
GTATTCTTTGTAGATCAAGG+TGG | - | chr5.2:30320637-30320656 | None:intergenic | 35.0% | |
GTGAATTATCTAATGAACCC+AGG | + | chr5.2:30324504-30324523 | MS.gene55209:intron | 35.0% | |
GTTGTACAAGATTATCTCGA+AGG | + | chr5.2:30323156-30323175 | MS.gene55209:intron | 35.0% | |
TAATGCTGAGTTATTGGATG+AGG | + | chr5.2:30321333-30321352 | MS.gene55209:CDS | 35.0% | |
TACAGGAAGATAGTTATTGG+AGG | + | chr5.2:30322612-30322631 | MS.gene55209:CDS | 35.0% | |
TACCCAACCTTTACTTACTT+TGG | + | chr5.2:30324362-30324381 | MS.gene55209:intron | 35.0% | |
TACTCAATGGAATCAGATGA+TGG | + | chr5.2:30321052-30321071 | MS.gene55209:CDS | 35.0% | |
TAGGAACAATTGGTGAATAG+AGG | - | chr5.2:30325472-30325491 | None:intergenic | 35.0% | |
TAGTGACTACAACAATTGTG+TGG | + | chr5.2:30326305-30326324 | MS.gene55209:intron | 35.0% | |
TATTAAAGGTCGAAGTCGAT+TGG | - | chr5.2:30323188-30323207 | None:intergenic | 35.0% | |
TCAAGCCATACTTTGTAAGA+TGG | + | chr5.2:30323387-30323406 | MS.gene55209:intron | 35.0% | |
TCATTAGATAATTCACCGTG+AGG | - | chr5.2:30324500-30324519 | None:intergenic | 35.0% | |
TCTTACAAAGTATGGCTTGA+AGG | - | chr5.2:30323387-30323406 | None:intergenic | 35.0% | |
TGCATCTCTTCAAACATTAG+TGG | + | chr5.2:30322253-30322272 | MS.gene55209:CDS | 35.0% | |
TGGTATTAATTGGATGCGTT+GGG | + | chr5.2:30324125-30324144 | MS.gene55209:intron | 35.0% | |
TGGTTTAGGCTTTCGTAATA+TGG | + | chr5.2:30324176-30324195 | MS.gene55209:intron | 35.0% | |
TGTCATCTGCAAATAACAAG+TGG | - | chr5.2:30323654-30323673 | None:intergenic | 35.0% | |
TTAATAAGATTGATGCGGGT+AGG | - | chr5.2:30324813-30324832 | None:intergenic | 35.0% | |
TTAATGTGTGGAATATGCCT+TGG | + | chr5.2:30324418-30324437 | MS.gene55209:intron | 35.0% | |
TTCATCTTCTTCATCACTCA+TGG | - | chr5.2:30320423-30320442 | None:intergenic | 35.0% | |
TTGATGCATCATGAGTTTGA+TGG | + | chr5.2:30325897-30325916 | MS.gene55209:intron | 35.0% | |
TTTCCATCATCATATAGGAG+CGG | - | chr5.2:30320532-30320551 | None:intergenic | 35.0% | |
! | AACAAAGAGTACATAGTGGA+TGG | - | chr5.2:30325653-30325672 | None:intergenic | 35.0% |
! | AATGATCCTTGGTGCATTAT+CGG | + | chr5.2:30322005-30322024 | MS.gene55209:intron | 35.0% |
! | AGCTTTTAATCTCTCTATGC+TGG | + | chr5.2:30324200-30324219 | MS.gene55209:intron | 35.0% |
! | ATTTTTAACGGCGATCGTAT+AGG | + | chr5.2:30323472-30323491 | MS.gene55209:intron | 35.0% |
! | CATAATATGCAATGATGGTG+CGG | + | chr5.2:30321288-30321307 | MS.gene55209:CDS | 35.0% |
! | CGGCTTTTTATCAGAAATTC+TGG | + | chr5.2:30322978-30322997 | MS.gene55209:intron | 35.0% |
! | GCTTTTAATCTCTCTATGCT+GGG | + | chr5.2:30324201-30324220 | MS.gene55209:intron | 35.0% |
! | GGCAATTTTCTCTTATCTCA+AGG | + | chr5.2:30323906-30323925 | MS.gene55209:intron | 35.0% |
! | TTCACCTGGTTTAAAAGCAT+TGG | + | chr5.2:30322158-30322177 | MS.gene55209:CDS | 35.0% |
! | TTGCATTTTATCCTACCCAT+CGG | - | chr5.2:30325227-30325246 | None:intergenic | 35.0% |
! | TTTGCTCTCAATGGATTTCT+TGG | + | chr5.2:30323413-30323432 | MS.gene55209:intron | 35.0% |
! | TTTTGCTCGAGAACAAATGA+AGG | - | chr5.2:30325120-30325139 | None:intergenic | 35.0% |
!! | AAAAGGTAAAGTTGGTGAGA+TGG | + | chr5.2:30323312-30323331 | MS.gene55209:intron | 35.0% |
!! | AGTTTTGACAGGATTCCAAA+AGG | - | chr5.2:30320564-30320583 | None:intergenic | 35.0% |
!! | GTTCTAAAGCTACAGAATGT+TGG | + | chr5.2:30324910-30324929 | MS.gene55209:intron | 35.0% |
!! | TCTCATTATGAAAGTGCTTC+TGG | + | chr5.2:30323730-30323749 | MS.gene55209:intron | 35.0% |
!! | TCTTGCAAACTTGTTGTTAC+AGG | + | chr5.2:30322595-30322614 | MS.gene55209:CDS | 35.0% |
!! | TGAATCTGTACAGTTTTGAC+AGG | - | chr5.2:30320575-30320594 | None:intergenic | 35.0% |
!! | TTGATTTGCAGCGCATATTA+TGG | - | chr5.2:30323294-30323313 | None:intergenic | 35.0% |
!!! | AAAGTCTTTTGGCTTTCAGA+TGG | + | chr5.2:30322644-30322663 | MS.gene55209:CDS | 35.0% |
!!! | ACTTTATTTTGAGGACCTCA+CGG | + | chr5.2:30324482-30324501 | MS.gene55209:intron | 35.0% |
!!! | TGTGCTTTAGAGACTTTTTC+GGG | + | chr5.2:30325294-30325313 | MS.gene55209:intron | 35.0% |
!!! | TTTTTCGGGCAGCTTTTATA+TGG | + | chr5.2:30325308-30325327 | MS.gene55209:intron | 35.0% |
!!! | TTTTTTCATCAGCATGTTCG+TGG | + | chr5.2:30323020-30323039 | MS.gene55209:intron | 35.0% |
AAAAAAATCAAGAGGCCTGG+AGG | + | chr5.2:30320932-30320951 | MS.gene55209:CDS | 40.0% | |
AAAAAATCAAGAGGCCTGGA+GGG | + | chr5.2:30320933-30320952 | MS.gene55209:CDS | 40.0% | |
AAATCACCGATAATGCACCA+AGG | - | chr5.2:30322014-30322033 | None:intergenic | 40.0% | |
AACACGTTGCAAAGAGAGAT+GGG | - | chr5.2:30323139-30323158 | None:intergenic | 40.0% | |
AATAACAAGTGGCTGACAGA+CGG | - | chr5.2:30323643-30323662 | None:intergenic | 40.0% | |
AATCCGCTCCTATATGATGA+TGG | + | chr5.2:30320526-30320545 | MS.gene55209:CDS | 40.0% | |
AATGAACGACACTGCAAAGT+CGG | - | chr5.2:30325549-30325568 | None:intergenic | 40.0% | |
AATTGCGCCATAAAACAGCT+AGG | - | chr5.2:30321824-30321843 | None:intergenic | 40.0% | |
ACACAGTGAATGGTTGAATG+AGG | - | chr5.2:30322892-30322911 | None:intergenic | 40.0% | |
ACAGAATGTTGGGACAGAAT+GGG | + | chr5.2:30324921-30324940 | MS.gene55209:intron | 40.0% | |
ACATCAGATTCAAGTACGAG+CGG | + | chr5.2:30320966-30320985 | MS.gene55209:CDS | 40.0% | |
ACTCACACACACTTACGTTT+AGG | + | chr5.2:30326238-30326257 | MS.gene55209:intron | 40.0% | |
ACTCTTCACAAAAGTCTTGG+TGG | + | chr5.2:30324156-30324175 | MS.gene55209:intron | 40.0% | |
AGAGACCAACAAAAACAGCT+TGG | - | chr5.2:30326047-30326066 | None:intergenic | 40.0% | |
AGCTATATTCAGCATGCATC+CGG | + | chr5.2:30322925-30322944 | MS.gene55209:intron | 40.0% | |
AGGACTCTAATACGCATGTA+GGG | - | chr5.2:30320881-30320900 | None:intergenic | 40.0% | |
AGGTCACCAAATTCATTGGT+AGG | - | chr5.2:30325491-30325510 | None:intergenic | 40.0% | |
AGGTCCTCAAAATAAAGTGG+CGG | - | chr5.2:30324480-30324499 | None:intergenic | 40.0% | |
AGGTGAACTGGTATCCAATA+AGG | - | chr5.2:30322145-30322164 | None:intergenic | 40.0% | |
AGTAAGTAAGGAGCTTGAGT+CGG | - | chr5.2:30324250-30324269 | None:intergenic | 40.0% | |
AGTAGTGATATCATCTGGAG+AGG | - | chr5.2:30323803-30323822 | None:intergenic | 40.0% | |
ATAATCCAAGCTACACTTGG+AGG | + | chr5.2:30324328-30324347 | MS.gene55209:intron | 40.0% | |
ATCATCATATAGGAGCGGAT+TGG | - | chr5.2:30320527-30320546 | None:intergenic | 40.0% | |
ATCCCTACGGGGAAAATATT+TGG | - | chr5.2:30324286-30324305 | None:intergenic | 40.0% | |
ATCTCAACTGGACAGCTTTA+TGG | + | chr5.2:30324727-30324746 | MS.gene55209:intron | 40.0% | |
ATGTGGCAATATCAAACGGA+TGG | + | chr5.2:30325402-30325421 | MS.gene55209:intron | 40.0% | |
ATTCACTGTGTCCGAATTCA+AGG | + | chr5.2:30322901-30322920 | MS.gene55209:intron | 40.0% | |
ATTCGGATATAAGGTTTGCC+AGG | - | chr5.2:30322234-30322253 | None:intergenic | 40.0% | |
CAAAAGACACACTACAAGAG+TGG | + | chr5.2:30325135-30325154 | MS.gene55209:intron | 40.0% | |
CACAGTGAATGGTTGAATGA+GGG | - | chr5.2:30322891-30322910 | None:intergenic | 40.0% | |
CAGAAAAAAATCAAGAGGCC+TGG | + | chr5.2:30320929-30320948 | MS.gene55209:CDS | 40.0% | |
CATAGATGGAAGATTGGTGA+TGG | + | chr5.2:30324387-30324406 | MS.gene55209:intron | 40.0% | |
CCCAACCTTTACTTACTTTG+GGG | + | chr5.2:30324364-30324383 | MS.gene55209:intron | 40.0% | |
CCCCAAAGTAAGTAAAGGTT+GGG | - | chr5.2:30324367-30324386 | None:intergenic | 40.0% | |
CGCACCATCATTGCATATTA+TGG | - | chr5.2:30321290-30321309 | None:intergenic | 40.0% | |
CTATGCCCCAAAGTAAGTAA+AGG | - | chr5.2:30324372-30324391 | None:intergenic | 40.0% | |
CTATGCTGGGTAAACAAAGT+TGG | + | chr5.2:30324214-30324233 | MS.gene55209:intron | 40.0% | |
CTGTGAGAAGCTATACTCAA+TGG | + | chr5.2:30321039-30321058 | MS.gene55209:CDS | 40.0% | |
CTTATCTCAAGGACCGTATT+TGG | + | chr5.2:30323917-30323936 | MS.gene55209:intron | 40.0% | |
GAAAAAGTGGGGAAAGACAT+TGG | + | chr5.2:30320797-30320816 | MS.gene55209:CDS | 40.0% | |
GAGACCAACAAAAACAGCTT+GGG | - | chr5.2:30326046-30326065 | None:intergenic | 40.0% | |
GATTTCTTGGATGCCTCTTT+AGG | + | chr5.2:30324303-30324322 | MS.gene55209:intron | 40.0% | |
GCTGACACTATCAAATGCTT+TGG | - | chr5.2:30323356-30323375 | None:intergenic | 40.0% | |
GGTGAACTGGTATCCAATAA+GGG | - | chr5.2:30322144-30322163 | None:intergenic | 40.0% | |
GTAGCCATGCGTTGTTAAAA+CGG | - | chr5.2:30322352-30322371 | None:intergenic | 40.0% | |
GTGAACTGGTATCCAATAAG+GGG | - | chr5.2:30322143-30322162 | None:intergenic | 40.0% | |
GTGAGGTCCTCAAAATAAAG+TGG | - | chr5.2:30324483-30324502 | None:intergenic | 40.0% | |
GTGGTATTAATTGGATGCGT+TGG | + | chr5.2:30324124-30324143 | MS.gene55209:intron | 40.0% | |
TAAACGTAAGTGTGTGTGAG+TGG | - | chr5.2:30326239-30326258 | None:intergenic | 40.0% | |
TACAGAATGTTGGGACAGAA+TGG | + | chr5.2:30324920-30324939 | MS.gene55209:intron | 40.0% | |
TACGAATATCTTCTCTCCCA+TGG | - | chr5.2:30324614-30324633 | None:intergenic | 40.0% | |
TACGAGGTCACCAAATTCAT+TGG | - | chr5.2:30325495-30325514 | None:intergenic | 40.0% | |
TAGTAAAATCATTCGCCGCA+AGG | - | chr5.2:30324974-30324993 | None:intergenic | 40.0% | |
TCCAAGTGTAGCTTGGATTA+TGG | - | chr5.2:30324329-30324348 | None:intergenic | 40.0% | |
TCTATGGATACTCAGACTCA+GGG | + | chr5.2:30321934-30321953 | MS.gene55209:intron | 40.0% | |
TCTCACACAAGCAATCAATG+AGG | + | chr5.2:30321453-30321472 | MS.gene55209:intron | 40.0% | |
TGACAATCCGGAATCTATGA+AGG | + | chr5.2:30323105-30323124 | MS.gene55209:intron | 40.0% | |
TGTGAGTGGTTGCATTGAAA+TGG | - | chr5.2:30326225-30326244 | None:intergenic | 40.0% | |
TTAAAACGGAAACTACGGTG+AGG | - | chr5.2:30322338-30322357 | None:intergenic | 40.0% | |
TTATTGGATACCAGTTCACC+TGG | + | chr5.2:30322144-30322163 | MS.gene55209:CDS | 40.0% | |
TTCACAAGTTGTATGAGCTC+AGG | - | chr5.2:30322380-30322399 | None:intergenic | 40.0% | |
TTCTATGGATACTCAGACTC+AGG | + | chr5.2:30321933-30321952 | MS.gene55209:intron | 40.0% | |
TTGAATTCGGACACAGTGAA+TGG | - | chr5.2:30322902-30322921 | None:intergenic | 40.0% | |
TTGCAGCTAGATGTTGTTGT+TGG | - | chr5.2:30325031-30325050 | None:intergenic | 40.0% | |
TTTGACTAGAACTTCCTTGC+CGG | - | chr5.2:30323983-30324002 | None:intergenic | 40.0% | |
TTTGAGGACACGAGTAAGTA+AGG | - | chr5.2:30324262-30324281 | None:intergenic | 40.0% | |
! | AAGCCAAATATTTTCCCCGT+AGG | + | chr5.2:30324280-30324299 | MS.gene55209:intron | 40.0% |
! | AAGGCACCCATACAATAAGA+GGG | - | chr5.2:30324024-30324043 | None:intergenic | 40.0% |
! | ACTTTGCAGTGTCGTTCATT+AGG | + | chr5.2:30325549-30325568 | MS.gene55209:intron | 40.0% |
! | AGATGATGGCAGTAGACTAT+GGG | + | chr5.2:30321066-30321085 | MS.gene55209:CDS | 40.0% |
! | AGATGGTTGTCAAAGTACCA+TGG | - | chr5.2:30320671-30320690 | None:intergenic | 40.0% |
! | AGCCAAATATTTTCCCCGTA+GGG | + | chr5.2:30324281-30324300 | MS.gene55209:intron | 40.0% |
! | CACAAAAGTCTTGGTGGTTT+AGG | + | chr5.2:30324162-30324181 | MS.gene55209:intron | 40.0% |
! | CACTTTTCTGTCGATCGAAT+TGG | + | chr5.2:30321786-30321805 | MS.gene55209:intron | 40.0% |
! | CAGTTGTAGCTTTACAGAAG+AGG | - | chr5.2:30323681-30323700 | None:intergenic | 40.0% |
! | CGGACTAGGTCTTTAATAGA+CGG | - | chr5.2:30321675-30321694 | None:intergenic | 40.0% |
! | GTCTTTGGTAACATTGGAAG+TGG | + | chr5.2:30323841-30323860 | MS.gene55209:intron | 40.0% |
! | TACAATCCATGACAGCGTTT+TGG | - | chr5.2:30322106-30322125 | None:intergenic | 40.0% |
! | TGCAGCTAGATGTTGTTGTT+GGG | - | chr5.2:30325030-30325049 | None:intergenic | 40.0% |
! | TGCATCATGAGTTTGATGGT+AGG | + | chr5.2:30325901-30325920 | MS.gene55209:intron | 40.0% |
! | TGCTTTTAAACCAGGTGAAC+TGG | - | chr5.2:30322157-30322176 | None:intergenic | 40.0% |
! | TGTGCCAATGCTTTTAAACC+AGG | - | chr5.2:30322165-30322184 | None:intergenic | 40.0% |
! | TTTCCCAAAGCTTTGTGTTG+CGG | - | chr5.2:30325079-30325098 | None:intergenic | 40.0% |
!! | AAGCATTTGATAGTGTCAGC+TGG | + | chr5.2:30323356-30323375 | MS.gene55209:intron | 40.0% |
!! | AGATGGGTTTTTGCTCTCAA+TGG | + | chr5.2:30323404-30323423 | MS.gene55209:intron | 40.0% |
!! | CAATGCTCCTTTGGAGTTTA+TGG | + | chr5.2:30325048-30325067 | MS.gene55209:intron | 40.0% |
!! | CGTTGATTTGCTGGATTGAT+TGG | - | chr5.2:30321424-30321443 | None:intergenic | 40.0% |
!! | CTTGGTGTCTTTGGTAACAT+TGG | + | chr5.2:30323835-30323854 | MS.gene55209:intron | 40.0% |
!! | GGGGAAAATATTTGGCTTTG+AGG | - | chr5.2:30324278-30324297 | None:intergenic | 40.0% |
!! | GTTTCCGTTTTAACAACGCA+TGG | + | chr5.2:30322345-30322364 | MS.gene55209:CDS | 40.0% |
!! | TACTTACTTTGGGGCATAGA+TGG | + | chr5.2:30324373-30324392 | MS.gene55209:intron | 40.0% |
!! | TATTGGGGCTCTAAGAAGAA+CGG | + | chr5.2:30324096-30324115 | MS.gene55209:intron | 40.0% |
!! | TCAAACTCTCTTGGTGTCTT+TGG | + | chr5.2:30323826-30323845 | MS.gene55209:intron | 40.0% |
!!! | GAAACCCAAGCTGTTTTTGT+TGG | + | chr5.2:30326039-30326058 | MS.gene55209:intron | 40.0% |
!!! | GGCAATTTCTGCTACTTTTG+CGG | + | chr5.2:30320992-30321011 | MS.gene55209:CDS | 40.0% |
!!! | TCTTTTTTATTGGCAGAGCC+TGG | + | chr5.2:30321577-30321596 | MS.gene55209:intron | 40.0% |
AAAAAGCTGCGAGATTCCTC+AGG | + | chr5.2:30322728-30322747 | MS.gene55209:CDS | 45.0% | |
AAAAATCAAGAGGCCTGGAG+GGG | + | chr5.2:30320934-30320953 | MS.gene55209:CDS | 45.0% | |
AAACAATGCACCAACTCCCA+TGG | + | chr5.2:30321534-30321553 | MS.gene55209:intron | 45.0% | |
AAAGTGGAGGGAGACTTGAT+TGG | - | chr5.2:30320729-30320748 | None:intergenic | 45.0% | |
AAGTGGAGGGAGACTTGATT+GGG | - | chr5.2:30320728-30320747 | None:intergenic | 45.0% | |
ACGGTCGTCGTGGTATTAAT+TGG | + | chr5.2:30324115-30324134 | MS.gene55209:intron | 45.0% | |
ACTGCCAAAACCATGCATCA+TGG | + | chr5.2:30326435-30326454 | MS.gene55209:CDS | 45.0% | |
AGCTCCTAAAGGTGACAATC+CGG | + | chr5.2:30323093-30323112 | MS.gene55209:intron | 45.0% | |
AGGCATCCAAGAAATCCCTA+CGG | - | chr5.2:30324299-30324318 | None:intergenic | 45.0% | |
AGTTTCAGCTTCTAGCACAG+TGG | - | chr5.2:30325360-30325379 | None:intergenic | 45.0% | |
ATATAGAGGTAAGGGGAGAG+AGG | - | chr5.2:30323535-30323554 | None:intergenic | 45.0% | |
ATCCTGTTGTCGAAGTCTCT+TGG | + | chr5.2:30325514-30325533 | MS.gene55209:intron | 45.0% | |
ATCTAGCTGCAATGCTCCTT+TGG | + | chr5.2:30325039-30325058 | MS.gene55209:intron | 45.0% | |
ATGCATCCGGATAAATCACC+GGG | + | chr5.2:30322938-30322957 | MS.gene55209:intron | 45.0% | |
ATTTCCTCGCATAAGGAAGC+GGG | - | chr5.2:30324054-30324073 | None:intergenic | 45.0% | |
CAACACGTTGCAAAGAGAGA+TGG | - | chr5.2:30323140-30323159 | None:intergenic | 45.0% | |
CAAGACGCCAAAGAAAAGAG+CGG | - | chr5.2:30324776-30324795 | None:intergenic | 45.0% | |
CAATGTCCGGTTTATAGACG+CGG | - | chr5.2:30321695-30321714 | None:intergenic | 45.0% | |
CACACAAGCAATCAATGAGG+AGG | + | chr5.2:30321456-30321475 | MS.gene55209:intron | 45.0% | |
CACATGAGATGATTGCGTTG+TGG | - | chr5.2:30322835-30322854 | None:intergenic | 45.0% | |
CAGGACTCTAATACGCATGT+AGG | - | chr5.2:30320882-30320901 | None:intergenic | 45.0% | |
CAGGTGCACGATATTCCAAT+AGG | + | chr5.2:30320764-30320783 | MS.gene55209:CDS | 45.0% | |
CATCATGGACAACGCCTTAA+CGG | + | chr5.2:30323255-30323274 | MS.gene55209:intron | 45.0% | |
CATCTCATGTGTGCAAGCAA+GGG | + | chr5.2:30322844-30322863 | MS.gene55209:CDS | 45.0% | |
CATGCATCCGGATAAATCAC+CGG | + | chr5.2:30322937-30322956 | MS.gene55209:intron | 45.0% | |
CATGGTAGGACGTAACAAGA+AGG | + | chr5.2:30323885-30323904 | MS.gene55209:intron | 45.0% | |
CCTTATGCGAGGAAATCGAA+AGG | + | chr5.2:30324058-30324077 | MS.gene55209:intron | 45.0% | |
CCTTTCGATTTCCTCGCATA+AGG | - | chr5.2:30324061-30324080 | None:intergenic | 45.0% | |
CGCCCCATAATATGCAATGA+TGG | + | chr5.2:30321283-30321302 | MS.gene55209:CDS | 45.0% | |
CTATTGGAATATCGTGCACC+TGG | - | chr5.2:30320766-30320785 | None:intergenic | 45.0% | |
CTGAGAGTCCAAGACAATCT+AGG | - | chr5.2:30326372-30326391 | None:intergenic | 45.0% | |
CTGCCAAAACCATGCATCAT+GGG | + | chr5.2:30326436-30326455 | MS.gene55209:CDS | 45.0% | |
CTTCTTGTTACGTCCTACCA+TGG | - | chr5.2:30323887-30323906 | None:intergenic | 45.0% | |
CTTTCATCTGTAACTGTCGC+CGG | - | chr5.2:30321178-30321197 | None:intergenic | 45.0% | |
GAAAGGCAGAGATCAACTAG+AGG | + | chr5.2:30321106-30321125 | MS.gene55209:CDS | 45.0% | |
GAGACACATGATTCGACACA+AGG | - | chr5.2:30324846-30324865 | None:intergenic | 45.0% | |
GAGTGGTTGCATTGAAATGG+TGG | - | chr5.2:30326222-30326241 | None:intergenic | 45.0% | |
GATCGAATTGGTAGAAGTGG+CGG | + | chr5.2:30321798-30321817 | MS.gene55209:intron | 45.0% | |
GATTCCGGATTGTCACCTTT+AGG | - | chr5.2:30323100-30323119 | None:intergenic | 45.0% | |
GATTGGGTAGACAGTTGTCA+GGG | - | chr5.2:30320712-30320731 | None:intergenic | 45.0% | |
GATTTCCTCGCATAAGGAAG+CGG | - | chr5.2:30324055-30324074 | None:intergenic | 45.0% | |
GCAGAACTGGTGACCTTTAA+TGG | - | chr5.2:30321226-30321245 | None:intergenic | 45.0% | |
GCATAGAAGACATCTCTGCT+TGG | + | chr5.2:30322453-30322472 | MS.gene55209:CDS | 45.0% | |
GCCATAATCCAAGCTACACT+TGG | + | chr5.2:30324325-30324344 | MS.gene55209:intron | 45.0% | |
GCCCCAAAGTAAGTAAAGGT+TGG | - | chr5.2:30324368-30324387 | None:intergenic | 45.0% | |
GCTTGGATTATGGCCTAAAG+AGG | - | chr5.2:30324319-30324338 | None:intergenic | 45.0% | |
GGCTCTTCCATAAACTCCAA+AGG | - | chr5.2:30325058-30325077 | None:intergenic | 45.0% | |
GGTCACCAGTTCTGCAAATT+TGG | + | chr5.2:30321231-30321250 | MS.gene55209:CDS | 45.0% | |
GTCCAGTTGAGATGTCTTTG+CGG | - | chr5.2:30324720-30324739 | None:intergenic | 45.0% | |
GTCGATCGAATTGGTAGAAG+TGG | + | chr5.2:30321795-30321814 | MS.gene55209:intron | 45.0% | |
GTCTTTGCGGCTGTGTATAT+GGG | - | chr5.2:30324707-30324726 | None:intergenic | 45.0% | |
GTGTGGGAATGTCATCAGTT+TGG | - | chr5.2:30320454-30320473 | None:intergenic | 45.0% | |
GTTGTAGTCACTAGCTAGCA+AGG | - | chr5.2:30326298-30326317 | None:intergenic | 45.0% | |
TAATGTTCATTTCGCCTGGC+AGG | - | chr5.2:30321611-30321630 | None:intergenic | 45.0% | |
TAGTCACTAGCTAGCAAGGT+TGG | - | chr5.2:30326294-30326313 | None:intergenic | 45.0% | |
TATAGAGGTAAGGGGAGAGA+GGG | - | chr5.2:30323534-30323553 | None:intergenic | 45.0% | |
TCAATCTACACTGCCCGAAA+TGG | + | chr5.2:30322806-30322825 | MS.gene55209:CDS | 45.0% | |
TCATCTCATGTGTGCAAGCA+AGG | + | chr5.2:30322843-30322862 | MS.gene55209:CDS | 45.0% | |
TCCTCAAAATAAAGTGGCGG+AGG | - | chr5.2:30324477-30324496 | None:intergenic | 45.0% | |
TCTCACAGTAGTCCTCGATA+TGG | - | chr5.2:30321027-30321046 | None:intergenic | 45.0% | |
TGAGGAAACGACCAACAAGA+CGG | - | chr5.2:30320496-30320515 | None:intergenic | 45.0% | |
TGATTGGGTAGACAGTTGTC+AGG | - | chr5.2:30320713-30320732 | None:intergenic | 45.0% | |
TGCTCGAGAACAAATGAAGG+TGG | - | chr5.2:30325117-30325136 | None:intergenic | 45.0% | |
TGGCGACTTACTGCATTCTA+TGG | + | chr5.2:30321918-30321937 | MS.gene55209:intron | 45.0% | |
TGTCTTTGCGGCTGTGTATA+TGG | - | chr5.2:30324708-30324727 | None:intergenic | 45.0% | |
TTCAGCGATCAAACTCTCGA+GGG | + | chr5.2:30326133-30326152 | MS.gene55209:intron | 45.0% | |
TTCTCTCCCATGGCAGTAAA+GGG | - | chr5.2:30324604-30324623 | None:intergenic | 45.0% | |
TTCTGTTGCAGCCTTGGTAT+CGG | - | chr5.2:30321512-30321531 | None:intergenic | 45.0% | |
TTGCCAGGATGATGTGACAA+GGG | - | chr5.2:30322219-30322238 | None:intergenic | 45.0% | |
TTGCGTTGTGGTCACCATTT+CGG | - | chr5.2:30322823-30322842 | None:intergenic | 45.0% | |
TTGGGGCATAGATGGAAGAT+TGG | + | chr5.2:30324381-30324400 | MS.gene55209:intron | 45.0% | |
TTGTTACGTCCTACCATGGA+TGG | - | chr5.2:30323883-30323902 | None:intergenic | 45.0% | |
TTTCAGCGATCAAACTCTCG+AGG | + | chr5.2:30326132-30326151 | MS.gene55209:intron | 45.0% | |
TTTGCCAGGATGATGTGACA+AGG | - | chr5.2:30322220-30322239 | None:intergenic | 45.0% | |
! | ATATTTGGGACTGCCATCCA+TGG | + | chr5.2:30323867-30323886 | MS.gene55209:intron | 45.0% |
! | ATGAACAAGCGACTGATTCC+AGG | - | chr5.2:30324538-30324557 | None:intergenic | 45.0% |
! | ATTTTTCCTGGCTGAAGCTG+TGG | - | chr5.2:30322696-30322715 | None:intergenic | 45.0% |
! | CAGATGATGGCAGTAGACTA+TGG | + | chr5.2:30321065-30321084 | MS.gene55209:CDS | 45.0% |
! | CATTTTATCCTACCCATCGG+TGG | - | chr5.2:30325224-30325243 | None:intergenic | 45.0% |
! | CCTCAAAATAAAGTGGCGGA+GGG | - | chr5.2:30324476-30324495 | None:intergenic | 45.0% |
! | CTCAAAATAAAGTGGCGGAG+GGG | - | chr5.2:30324475-30324494 | None:intergenic | 45.0% |
! | CTTAAACCTCTGGACCGTTT+TGG | - | chr5.2:30321388-30321407 | None:intergenic | 45.0% |
! | GATATCATCTGGAGAGGTGT+TGG | - | chr5.2:30323797-30323816 | None:intergenic | 45.0% |
! | GATGATGGCAGTAGACTATG+GGG | + | chr5.2:30321067-30321086 | MS.gene55209:CDS | 45.0% |
! | GATTGTCACCTTTAGGAGCT+AGG | - | chr5.2:30323093-30323112 | None:intergenic | 45.0% |
! | GGCAACGCTCAAAAGTCTTT+TGG | + | chr5.2:30322633-30322652 | MS.gene55209:CDS | 45.0% |
! | GTTGGCACTGAATGCAATAG+CGG | - | chr5.2:30323779-30323798 | None:intergenic | 45.0% |
! | GTTTTCTTCTGTTGCAGCCT+TGG | - | chr5.2:30321518-30321537 | None:intergenic | 45.0% |
! | TTGCAGTGTCGTTCATTAGG+AGG | + | chr5.2:30325552-30325571 | MS.gene55209:intron | 45.0% |
! | TTTTCCCCGTAGGGATTTCT+TGG | + | chr5.2:30324290-30324309 | MS.gene55209:intron | 45.0% |
!! | CACAAAGCTTTGGGAAACCA+TGG | + | chr5.2:30325082-30325101 | MS.gene55209:intron | 45.0% |
!! | GAAGGCACCCATACAATAAG+AGG | - | chr5.2:30324025-30324044 | None:intergenic | 45.0% |
!! | GCGATTTGGTGACGGAAATT+TGG | - | chr5.2:30322494-30322513 | None:intergenic | 45.0% |
!! | GTGACTAGCCTAGATTGTCT+TGG | + | chr5.2:30326361-30326380 | MS.gene55209:CDS | 45.0% |
!! | GTTGATGTGCGTTGATTTGC+TGG | - | chr5.2:30321433-30321452 | None:intergenic | 45.0% |
!! | GTTGCTTTGCGATTTGGTGA+CGG | - | chr5.2:30322502-30322521 | None:intergenic | 45.0% |
!! | TCATATAGGAGCGGATTGGT+CGG | - | chr5.2:30320523-30320542 | None:intergenic | 45.0% |
!!! | ATGCATGGTTTTGGCAGTGT+TGG | - | chr5.2:30326433-30326452 | None:intergenic | 45.0% |
AAAGCCGGATTCAAACCGTC+AGG | - | chr5.2:30322965-30322984 | None:intergenic | 50.0% | |
AACCATGCATCATGGGAGGT+TGG | + | chr5.2:30326443-30326462 | MS.gene55209:CDS | 50.0% | |
AAGCCGGATTCAAACCGTCA+GGG | - | chr5.2:30322964-30322983 | None:intergenic | 50.0% | |
ACCAAACCAAAACGGTCCAG+AGG | + | chr5.2:30321379-30321398 | MS.gene55209:CDS | 50.0% | |
AGACCTCGTCCAGGTGTAAT+AGG | - | chr5.2:30323499-30323518 | None:intergenic | 50.0% | |
AGACTCCTCCAAGTGTAGCT+TGG | - | chr5.2:30324336-30324355 | None:intergenic | 50.0% | |
AGAGCCGCAACACAAAGCTT+TGG | + | chr5.2:30325072-30325091 | MS.gene55209:intron | 50.0% | |
AGATTCAAGTACGAGCGGCT+AGG | + | chr5.2:30320971-30320990 | MS.gene55209:CDS | 50.0% | |
AGCCGCAAAGACATCTCAAC+TGG | + | chr5.2:30324715-30324734 | MS.gene55209:intron | 50.0% | |
AGGATCCAGCAGCTGGTAAT+TGG | + | chr5.2:30321898-30321917 | MS.gene55209:intron | 50.0% | |
AGGCAGAGATCAACTAGAGG+TGG | + | chr5.2:30321109-30321128 | MS.gene55209:CDS | 50.0% | |
ATACGGAGCAGTCCACTTCT+TGG | + | chr5.2:30325192-30325211 | MS.gene55209:intron | 50.0% | |
ATCGTCTGCTACCGATACCA+AGG | + | chr5.2:30321498-30321517 | MS.gene55209:intron | 50.0% | |
ATGGATACTCAGACTCAGGG+AGG | + | chr5.2:30321937-30321956 | MS.gene55209:intron | 50.0% | |
ATGTAGTTTGACTCCCCTCC+AGG | - | chr5.2:30320950-30320969 | None:intergenic | 50.0% | |
ATTATGGGGCGCATCAAGTG+AGG | - | chr5.2:30321274-30321293 | None:intergenic | 50.0% | |
CACGCTTGTCAGATGCTGAA+AGG | - | chr5.2:30322046-30322065 | None:intergenic | 50.0% | |
CAGAGATCAACTAGAGGTGG+GGG | + | chr5.2:30321112-30321131 | MS.gene55209:CDS | 50.0% | |
CCAAAACCATGCATCATGGG+AGG | + | chr5.2:30326439-30326458 | MS.gene55209:CDS | 50.0% | |
CCAGAATGGCACAAAGTGGA+GGG | - | chr5.2:30320741-30320760 | None:intergenic | 50.0% | |
CCTAGTCCGCGTCTATAAAC+CGG | + | chr5.2:30321686-30321705 | MS.gene55209:intron | 50.0% | |
CGGAGGTCCTTCATAGATTC+CGG | - | chr5.2:30323115-30323134 | None:intergenic | 50.0% | |
CGGTTTCCAAAACGCTGTCA+TGG | + | chr5.2:30322097-30322116 | MS.gene55209:CDS | 50.0% | |
CGTATAGGCCCTATTACACC+TGG | + | chr5.2:30323487-30323506 | MS.gene55209:intron | 50.0% | |
CGTTGCAAAGAGAGATGGGT+CGG | - | chr5.2:30323135-30323154 | None:intergenic | 50.0% | |
CTTCTCTCCCATGGCAGTAA+AGG | - | chr5.2:30324605-30324624 | None:intergenic | 50.0% | |
CTTTCAGCATCTGACAAGCG+TGG | + | chr5.2:30322044-30322063 | MS.gene55209:intron | 50.0% | |
GACCAGAGCTGCGTATTGAA+AGG | + | chr5.2:30321089-30321108 | MS.gene55209:CDS | 50.0% | |
GACCTCGTCCAGGTGTAATA+GGG | - | chr5.2:30323498-30323517 | None:intergenic | 50.0% | |
GACTTCGACAACAGGATACG+AGG | - | chr5.2:30325511-30325530 | None:intergenic | 50.0% | |
GAGCCGCAACACAAAGCTTT+GGG | + | chr5.2:30325073-30325092 | MS.gene55209:intron | 50.0% | |
GATTCGTGAGCTACTCCTTG+CGG | + | chr5.2:30324956-30324975 | MS.gene55209:intron | 50.0% | |
GCAGAGATCAACTAGAGGTG+GGG | + | chr5.2:30321111-30321130 | MS.gene55209:CDS | 50.0% | |
GCATCCAAGAAATCCCTACG+GGG | - | chr5.2:30324297-30324316 | None:intergenic | 50.0% | |
GCATGTTCGTGGCTCAATTC+TGG | + | chr5.2:30323031-30323050 | MS.gene55209:intron | 50.0% | |
GCTACACTTGGAGGAGTCTT+TGG | + | chr5.2:30324337-30324356 | MS.gene55209:intron | 50.0% | |
GGATCCAGAATGGCACAAAG+TGG | - | chr5.2:30320745-30320764 | None:intergenic | 50.0% | |
GGCAGAGATCAACTAGAGGT+GGG | + | chr5.2:30321110-30321129 | MS.gene55209:CDS | 50.0% | |
GGCATCCAAGAAATCCCTAC+GGG | - | chr5.2:30324298-30324317 | None:intergenic | 50.0% | |
TAAGGAAGCGGGAATCAGGA+AGG | - | chr5.2:30324043-30324062 | None:intergenic | 50.0% | |
TACGGAGCAGTCCACTTCTT+GGG | + | chr5.2:30325193-30325212 | MS.gene55209:intron | 50.0% | |
TCAATTCAGGATCCAGCAGC+TGG | + | chr5.2:30321891-30321910 | MS.gene55209:intron | 50.0% | |
TCCAGAATGGCACAAAGTGG+AGG | - | chr5.2:30320742-30320761 | None:intergenic | 50.0% | |
TCTAAGAAGAACGGTCGTCG+TGG | + | chr5.2:30324105-30324124 | MS.gene55209:intron | 50.0% | |
TCTCTCCCATGGCAGTAAAG+GGG | - | chr5.2:30324603-30324622 | None:intergenic | 50.0% | |
TCTTGGGTGAAACCACCGAT+GGG | + | chr5.2:30325209-30325228 | MS.gene55209:intron | 50.0% | |
TGCAACGCGCAAAAGATCAG+AGG | + | chr5.2:30325165-30325184 | MS.gene55209:intron | 50.0% | |
TGCCAAGAGACTTCGACAAC+AGG | - | chr5.2:30325519-30325538 | None:intergenic | 50.0% | |
TGCCTTTCAATACGCAGCTC+TGG | - | chr5.2:30321094-30321113 | None:intergenic | 50.0% | |
TGCGAGATTCCTCAGGTACA+TGG | + | chr5.2:30322735-30322754 | MS.gene55209:CDS | 50.0% | |
TGCGTTGTGGTCACCATTTC+GGG | - | chr5.2:30322822-30322841 | None:intergenic | 50.0% | |
TGTTCACTCTCGCTCCATCA+TGG | + | chr5.2:30323240-30323259 | MS.gene55209:intron | 50.0% | |
TGTTGGGACAGAATGGGCAT+AGG | + | chr5.2:30324927-30324946 | MS.gene55209:intron | 50.0% | |
TTCCTCAGGTACATGGACCA+CGG | + | chr5.2:30322742-30322761 | MS.gene55209:CDS | 50.0% | |
TTCTTGGGTGAAACCACCGA+TGG | + | chr5.2:30325208-30325227 | MS.gene55209:intron | 50.0% | |
! | AAAATAAAGTGGCGGAGGGG+TGG | - | chr5.2:30324472-30324491 | None:intergenic | 50.0% |
! | AACAAGCGACTGATTCCAGG+AGG | - | chr5.2:30324535-30324554 | None:intergenic | 50.0% |
! | AATCTAGGCTAGTCACCGTG+GGG | - | chr5.2:30326357-30326376 | None:intergenic | 50.0% |
! | ACAATCTAGGCTAGTCACCG+TGG | - | chr5.2:30326359-30326378 | None:intergenic | 50.0% |
! | CAAAGAAAAGAGCGGACTCG+AGG | - | chr5.2:30324768-30324787 | None:intergenic | 50.0% |
! | CAAGTGGATTTCGCATGAGC+AGG | + | chr5.2:30323210-30323229 | MS.gene55209:intron | 50.0% |
! | CAATCTAGGCTAGTCACCGT+GGG | - | chr5.2:30326358-30326377 | None:intergenic | 50.0% |
! | CCTCCCATGATGCATGGTTT+TGG | - | chr5.2:30326442-30326461 | None:intergenic | 50.0% |
! | CTCGAGTCCGCTCTTTTCTT+TGG | + | chr5.2:30324766-30324785 | MS.gene55209:intron | 50.0% |
! | CTTTGTGCCATTCTGGATCC+AGG | + | chr5.2:30320745-30320764 | MS.gene55209:CDS | 50.0% |
! | GAAGGTGGACGAAGTATCCA+TGG | - | chr5.2:30325102-30325121 | None:intergenic | 50.0% |
! | GACGATTTGGAGACGTCCAT+GGG | - | chr5.2:30321553-30321572 | None:intergenic | 50.0% |
! | GAGTGCGTTGCTTTGCGATT+TGG | - | chr5.2:30322508-30322527 | None:intergenic | 50.0% |
! | TGACGATTTGGAGACGTCCA+TGG | - | chr5.2:30321554-30321573 | None:intergenic | 50.0% |
!! | ACGAGGGTTTGCTGTTTGTG+TGG | - | chr5.2:30320471-30320490 | None:intergenic | 50.0% |
!! | CGAGGGTTTGCTGTTTGTGT+GGG | - | chr5.2:30320470-30320489 | None:intergenic | 50.0% |
!! | CGTTAAGGCGTTGTCCATGA+TGG | - | chr5.2:30323257-30323276 | None:intergenic | 50.0% |
!! | GAGGTATCGGAGTAAATCCC+AGG | - | chr5.2:30321973-30321992 | None:intergenic | 50.0% |
!!! | ACCTCTGGACCGTTTTGGTT+TGG | - | chr5.2:30321383-30321402 | None:intergenic | 50.0% |
!!! | CCCTCCGCCACTTTATTTTG+AGG | + | chr5.2:30324473-30324492 | MS.gene55209:intron | 50.0% |
!!! | TGCTACTTTTGCGGCATGCT+AGG | + | chr5.2:30321001-30321020 | MS.gene55209:CDS | 50.0% |
AAACCGCGAATGAGCCAGGA+TGG | - | chr5.2:30322083-30322102 | None:intergenic | 55.0% | |
AACCCTCGTCTCCGTCTTGT+TGG | + | chr5.2:30320482-30320501 | MS.gene55209:CDS | 55.0% | |
ACAGAGTTCATCGTGAGCCG+TGG | - | chr5.2:30322762-30322781 | None:intergenic | 55.0% | |
AGCCAACCTCCCATGATGCA+TGG | - | chr5.2:30326448-30326467 | None:intergenic | 55.0% | |
AGGATGATGTGACAAGGGCG+CGG | - | chr5.2:30322214-30322233 | None:intergenic | 55.0% | |
AGTCGCCAATTACCAGCTGC+TGG | - | chr5.2:30321906-30321925 | None:intergenic | 55.0% | |
ATCTTGGAACTGTCGAGGCC+TGG | + | chr5.2:30321632-30321651 | MS.gene55209:intron | 55.0% | |
CAACACCATGATCAGCCTGC+CGG | - | chr5.2:30321144-30321163 | None:intergenic | 55.0% | |
CAGATTCAAGAGGTCGAGCC+AGG | + | chr5.2:30320587-30320606 | MS.gene55209:CDS | 55.0% | |
CCATGCCCCTTTACTGCCAT+GGG | + | chr5.2:30324595-30324614 | MS.gene55209:intron | 55.0% | |
CCGGTTTATAGACGCGGACT+AGG | - | chr5.2:30321689-30321708 | None:intergenic | 55.0% | |
CGCATAAGGAAGCGGGAATC+AGG | - | chr5.2:30324047-30324066 | None:intergenic | 55.0% | |
CGGTGGTTTCACCCAAGAAG+TGG | - | chr5.2:30325207-30325226 | None:intergenic | 55.0% | |
CTAGAACTTCCTTGCCGGCA+CGG | - | chr5.2:30323978-30323997 | None:intergenic | 55.0% | |
GAACTGCCTTGACATGTCCC+AGG | - | chr5.2:30321653-30321672 | None:intergenic | 55.0% | |
GACCAACAAGACGGAGACGA+GGG | - | chr5.2:30320487-30320506 | None:intergenic | 55.0% | |
GATAAATCACCGGGCCCTGA+CGG | + | chr5.2:30322947-30322966 | MS.gene55209:intron | 55.0% | |
GATTCCAGGAGGTGGAACCT+GGG | - | chr5.2:30324524-30324543 | None:intergenic | 55.0% | |
GATTCCCGCTTCCTTATGCG+AGG | + | chr5.2:30324047-30324066 | MS.gene55209:intron | 55.0% | |
TAGAACTTCCTTGCCGGCAC+GGG | - | chr5.2:30323977-30323996 | None:intergenic | 55.0% | |
TCAGCATCTGACAAGCGTGG+TGG | + | chr5.2:30322047-30322066 | MS.gene55209:intron | 55.0% | |
TCAGGGCCCGGTGATTTATC+CGG | - | chr5.2:30322947-30322966 | None:intergenic | 55.0% | |
TCGTGCACCTGGATCCAGAA+TGG | - | chr5.2:30320755-30320774 | None:intergenic | 55.0% | |
TCTTGGAACTGTCGAGGCCT+GGG | + | chr5.2:30321633-30321652 | MS.gene55209:intron | 55.0% | |
TGATTCCAGGAGGTGGAACC+TGG | - | chr5.2:30324525-30324544 | None:intergenic | 55.0% | |
TGCAAAGAGAGATGGGTCGG+AGG | - | chr5.2:30323132-30323151 | None:intergenic | 55.0% | |
TGCAATGAAGCAGACCCCCA+CGG | + | chr5.2:30326339-30326358 | MS.gene55209:intron | 55.0% | |
TTCATGCCACAGCTTCAGCC+AGG | + | chr5.2:30322687-30322706 | MS.gene55209:CDS | 55.0% | |
TTGGAAACCGCGAATGAGCC+AGG | - | chr5.2:30322087-30322106 | None:intergenic | 55.0% | |
TTGGAGACGTCCATGGGAGT+TGG | - | chr5.2:30321547-30321566 | None:intergenic | 55.0% | |
TTGGGACTGCCATCCATGGT+AGG | + | chr5.2:30323871-30323890 | MS.gene55209:intron | 55.0% | |
! | AAGCGACTGATTCCAGGAGG+TGG | - | chr5.2:30324532-30324551 | None:intergenic | 55.0% |
! | AGAAAAGAGCGGACTCGAGG+CGG | - | chr5.2:30324765-30324784 | None:intergenic | 55.0% |
! | AGTGGCGTGTGATCTGAGAC+TGG | - | chr5.2:30322281-30322300 | None:intergenic | 55.0% |
! | ATCTAGGCTAGTCACCGTGG+GGG | - | chr5.2:30326356-30326375 | None:intergenic | 55.0% |
! | CCCTCCACTTTGTGCCATTC+TGG | + | chr5.2:30320738-30320757 | MS.gene55209:CDS | 55.0% |
! | GGAGAGGGTCAAGTTGCAGT+AGG | - | chr5.2:30322304-30322323 | None:intergenic | 55.0% |
! | GGGTCAAGTTGCAGTAGGAG+TGG | - | chr5.2:30322299-30322318 | None:intergenic | 55.0% |
!! | ACAAGCGTGGTGGACCTGAT+CGG | + | chr5.2:30322057-30322076 | MS.gene55209:CDS | 55.0% |
!! | AGCGGATTGGTCGGTTTGTG+AGG | - | chr5.2:30320514-30320533 | None:intergenic | 55.0% |
!! | GTGGCGGCCTAGCTGTTTTA+TGG | + | chr5.2:30321814-30321833 | MS.gene55209:intron | 55.0% |
!! | GTGGCTTTGTGACATCGAGC+AGG | - | chr5.2:30320901-30320920 | None:intergenic | 55.0% |
!! | TGGTGTTGCAGTTCACTCGC+CGG | + | chr5.2:30321156-30321175 | MS.gene55209:CDS | 55.0% |
AGCCGTGGTCCATGTACCTG+AGG | - | chr5.2:30322747-30322766 | None:intergenic | 60.0% | |
ATGAGCCAGGATGGCCGATC+AGG | - | chr5.2:30322074-30322093 | None:intergenic | 60.0% | |
CCCATGGCAGTAAAGGGGCA+TGG | - | chr5.2:30324598-30324617 | None:intergenic | 60.0% | |
CCTGGACGAGGTCTTCGACA+AGG | + | chr5.2:30323505-30323524 | MS.gene55209:intron | 60.0% | |
CCTTGTCGAAGACCTCGTCC+AGG | - | chr5.2:30323508-30323527 | None:intergenic | 60.0% | |
CGACCAACAAGACGGAGACG+AGG | - | chr5.2:30320488-30320507 | None:intergenic | 60.0% | |
CGGCATGCTAGGCCATATCG+AGG | + | chr5.2:30321012-30321031 | MS.gene55209:CDS | 60.0% | |
GCCATGCCCCTTTACTGCCA+TGG | + | chr5.2:30324594-30324613 | MS.gene55209:intron | 60.0% | |
GCGCCCTTGTCACATCATCC+TGG | + | chr5.2:30322213-30322232 | MS.gene55209:CDS | 60.0% | |
GCGGTCAAGACGCGCTTCTT+TGG | - | chr5.2:30322195-30322214 | None:intergenic | 60.0% | |
GGATTCAAACCGTCAGGGCC+CGG | - | chr5.2:30322959-30322978 | None:intergenic | 60.0% | |
GGCCCTATTACACCTGGACG+AGG | + | chr5.2:30323493-30323512 | MS.gene55209:intron | 60.0% | |
GGGCCCTGACGGTTTGAATC+CGG | + | chr5.2:30322958-30322977 | MS.gene55209:intron | 60.0% | |
GGGTGAAACCACCGATGGGT+AGG | + | chr5.2:30325213-30325232 | MS.gene55209:intron | 60.0% | |
TCATTTCGCCTGGCAGGCCT+GGG | - | chr5.2:30321605-30321624 | None:intergenic | 60.0% | |
TCGAGGCCTGGGACATGTCA+AGG | + | chr5.2:30321644-30321663 | MS.gene55209:intron | 60.0% | |
TGAACCCAGGTTCCACCTCC+TGG | + | chr5.2:30324517-30324536 | MS.gene55209:intron | 60.0% | |
TGCAACTTGACCCTCTCCCG+TGG | + | chr5.2:30322306-30322325 | MS.gene55209:CDS | 60.0% | |
TTCATTTCGCCTGGCAGGCC+TGG | - | chr5.2:30321606-30321625 | None:intergenic | 60.0% | |
TTCCTTGCCGGCACGGGAAA+GGG | - | chr5.2:30323971-30323990 | None:intergenic | 60.0% | |
! | ACGGCGCTGAACGACAGATG+CGG | - | chr5.2:30323624-30323643 | None:intergenic | 60.0% |
! | AGGGAGGCGCAGAGAATCCT+GGG | + | chr5.2:30321953-30321972 | MS.gene55209:intron | 60.0% |
! | TAAAGTGGCGGAGGGGTGGA+AGG | - | chr5.2:30324468-30324487 | None:intergenic | 60.0% |
AGGGGTGGAAGGCTTGAGCG+AGG | - | chr5.2:30324457-30324476 | None:intergenic | 65.0% | |
ATTGGCAGAGCCTGGCTCCC+AGG | + | chr5.2:30321585-30321604 | MS.gene55209:intron | 65.0% | |
CGGCCATCCTGGCTCATTCG+CGG | + | chr5.2:30322077-30322096 | MS.gene55209:CDS | 65.0% | |
CTACGGTGAGGTCTGCGCCA+CGG | - | chr5.2:30322326-30322345 | None:intergenic | 65.0% | |
CTTCCTTGCCGGCACGGGAA+AGG | - | chr5.2:30323972-30323991 | None:intergenic | 65.0% | |
GCACACCGGCAGGCTGATCA+TGG | + | chr5.2:30321136-30321155 | MS.gene55209:CDS | 65.0% | |
GGGGTGGAAGGCTTGAGCGA+GGG | - | chr5.2:30324456-30324475 | None:intergenic | 65.0% | |
GGGTGGAAGGCTTGAGCGAG+GGG | - | chr5.2:30324455-30324474 | None:intergenic | 65.0% | |
GTGGACCTGATCGGCCATCC+TGG | + | chr5.2:30322066-30322085 | MS.gene55209:CDS | 65.0% | |
TACGGTGAGGTCTGCGCCAC+GGG | - | chr5.2:30322325-30322344 | None:intergenic | 65.0% | |
TGCCGGCACGGGAAAGGGAA+CGG | - | chr5.2:30323966-30323985 | None:intergenic | 65.0% | |
TGGAAGGCTTGAGCGAGGGG+AGG | - | chr5.2:30324452-30324471 | None:intergenic | 65.0% | |
! | CAGGGAGGCGCAGAGAATCC+TGG | + | chr5.2:30321952-30321971 | MS.gene55209:intron | 65.0% |
! | CTAGAGGTGGGGGAGCACAC+CGG | + | chr5.2:30321122-30321141 | MS.gene55209:CDS | 65.0% |
! | TTCCCTTTCCCGTGCCGGCA+AGG | + | chr5.2:30323966-30323985 | MS.gene55209:intron | 65.0% |
GAGGGGAGGCTGCGGATCCA+AGG | - | chr5.2:30324438-30324457 | None:intergenic | 70.0% | |
GAGGTCTGCGCCACGGGAGA+GGG | - | chr5.2:30322319-30322338 | None:intergenic | 70.0% | |
GCCCGTTCCCTTTCCCGTGC+CGG | + | chr5.2:30323961-30323980 | MS.gene55209:intron | 70.0% | |
GCCGGCACGGGAAAGGGAAC+GGG | - | chr5.2:30323965-30323984 | None:intergenic | 70.0% | |
GCTTGAGCGAGGGGAGGCTG+CGG | - | chr5.2:30324446-30324465 | None:intergenic | 70.0% | |
TGAGGTCTGCGCCACGGGAG+AGG | - | chr5.2:30322320-30322339 | None:intergenic | 70.0% | |
! | AGGTGGGGGAGCACACCGGC+AGG | + | chr5.2:30321126-30321145 | MS.gene55209:CDS | 75.0% |
! | GCCTGGCAGGCCTGGGAGCC+AGG | - | chr5.2:30321598-30321617 | None:intergenic | 80.0% |
! | GCCTGGCTCCCAGGCCTGCC+AGG | + | chr5.2:30321594-30321613 | MS.gene55209:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 30320398 | 30326486 | 30320398 | ID=MS.gene55209 |
chr5.2 | mRNA | 30320398 | 30326486 | 30320398 | ID=MS.gene55209.t1;Parent=MS.gene55209 |
chr5.2 | exon | 30320398 | 30321400 | 30320398 | ID=MS.gene55209.t1.exon1;Parent=MS.gene55209.t1 |
chr5.2 | CDS | 30320398 | 30321400 | 30320398 | ID=cds.MS.gene55209.t1;Parent=MS.gene55209.t1 |
chr5.2 | exon | 30322051 | 30322907 | 30322051 | ID=MS.gene55209.t1.exon2;Parent=MS.gene55209.t1 |
chr5.2 | CDS | 30322051 | 30322907 | 30322051 | ID=cds.MS.gene55209.t1;Parent=MS.gene55209.t1 |
chr5.2 | exon | 30326352 | 30326486 | 30326352 | ID=MS.gene55209.t1.exon3;Parent=MS.gene55209.t1 |
chr5.2 | CDS | 30326352 | 30326486 | 30326352 | ID=cds.MS.gene55209.t1;Parent=MS.gene55209.t1 |
Gene Sequence |
Protein sequence |