AlfalfaGEDB | MS.gene03936

M. sativa cultivar XinJiangDaYe / MS.gene03936

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene03936.t1	PNX88800.1	53.9	219	101	0	1	219	1	219	3.80E-65	258.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene03936.t1	A0A2K3MDD6	53.9	219	101	0	1	219	1	219	2.8e-65	258.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene03936	MS.gene28718	PPI
MS.gene031967	MS.gene03936	PPI
MS.gene02896	MS.gene03936	PPI
MS.gene063214	MS.gene03936	PPI
MS.gene97410	MS.gene03936	PPI
MS.gene03936	MS.gene022929	PPI
MS.gene83772	MS.gene03936	PPI
MS.gene32415	MS.gene03936	PPI
MS.gene035626	MS.gene03936	PPI
MS.gene008927	MS.gene03936	PPI
MS.gene03936	MS.gene068629	PPI
MS.gene03936	MS.gene009781	PPI
MS.gene63762	MS.gene03936	PPI
MS.gene71675	MS.gene03936	PPI
MS.gene30208	MS.gene03936	PPI
MS.gene03936	MS.gene048342	PPI
MS.gene69495	MS.gene03936	PPI
MS.gene03936	MS.gene069624	PPI
MS.gene03936	MS.gene21066	PPI
MS.gene03936	MS.gene013890	PPI
MS.gene032311	MS.gene03936	PPI
MS.gene03936	MS.gene073582	PPI
MS.gene030090	MS.gene03936	PPI
MS.gene95561	MS.gene03936	PPI
MS.gene96174	MS.gene03936	PPI
MS.gene018196	MS.gene03936	PPI
MS.gene03936	MS.gene028714	PPI
MS.gene03936	MS.gene048706	PPI
MS.gene03936	MS.gene69586	PPI
MS.gene57019	MS.gene03936	PPI
MS.gene03936	MS.gene45083	PPI
MS.gene03936	MS.gene049561	PPI
MS.gene65546	MS.gene03936	PPI
MS.gene03936	MS.gene008658	PPI
MS.gene03936	MS.gene80362	PPI
MS.gene03936	MS.gene49057	PPI
MS.gene021968	MS.gene03936	PPI
MS.gene60059	MS.gene03936	PPI
MS.gene03936	MS.gene08708	PPI
MS.gene43393	MS.gene03936	PPI
MS.gene34197	MS.gene03936	PPI
MS.gene03936	MS.gene86275	PPI
MS.gene03936	MS.gene034643	PPI
MS.gene008275	MS.gene03936	PPI
MS.gene038757	MS.gene03936	PPI
MS.gene03936	MS.gene012889	PPI
MS.gene048072	MS.gene03936	PPI
MS.gene03936	MS.gene038757	PPI
MS.gene03936	MS.gene000506	PPI
MS.gene05436	MS.gene03936	PPI
MS.gene03936	MS.gene028716	PPI
MS.gene03936	MS.gene74639	PPI
MS.gene03936	MS.gene071133	PPI
MS.gene03936	MS.gene60266	PPI
MS.gene03936	MS.gene98467	PPI
MS.gene43924	MS.gene03936	PPI
MS.gene70932	MS.gene03936	PPI
MS.gene03936	MS.gene013644	PPI
MS.gene047954	MS.gene03936	PPI
MS.gene35175	MS.gene03936	PPI
MS.gene03936	MS.gene024522	PPI
MS.gene036423	MS.gene03936	PPI
MS.gene03936	MS.gene54051	PPI
MS.gene03936	MS.gene22111	PPI
MS.gene03936	MS.gene049610	PPI
MS.gene03936	MS.gene37955	PPI
MS.gene021965	MS.gene03936	PPI
MS.gene042614	MS.gene03936	PPI
MS.gene03936	MS.gene045875	PPI
MS.gene03936	MS.gene010890	PPI
MS.gene03936	MS.gene84790	PPI
MS.gene03936	MS.gene061579	PPI
MS.gene66651	MS.gene03936	PPI
MS.gene96109	MS.gene03936	PPI
MS.gene35202	MS.gene03936	PPI
MS.gene051449	MS.gene03936	PPI
MS.gene03936	MS.gene04970	PPI
MS.gene009121	MS.gene03936	PPI
MS.gene03936	MS.gene060788	PPI
MS.gene48477	MS.gene03936	PPI
MS.gene03936	MS.gene43924	PPI
MS.gene03936	MS.gene41643	PPI
MS.gene36069	MS.gene03936	PPI
MS.gene03936	MS.gene77990	PPI
MS.gene03936	MS.gene062511	PPI
MS.gene30136	MS.gene03936	PPI
MS.gene03936	MS.gene027994	PPI
MS.gene008861	MS.gene03936	PPI
MS.gene61452	MS.gene03936	PPI
MS.gene03936	MS.gene26433	PPI
MS.gene03936	MS.gene007022	PPI
MS.gene016102	MS.gene03936	PPI
MS.gene46941	MS.gene03936	PPI
MS.gene045614	MS.gene03936	PPI
MS.gene96541	MS.gene03936	PPI
MS.gene03936	MS.gene69584	PPI
MS.gene03936	MS.gene52349	PPI
MS.gene000634	MS.gene03936	PPI
MS.gene85295	MS.gene03936	PPI
MS.gene03936	MS.gene021647	PPI
MS.gene03936	MS.gene76420	PPI
MS.gene03936	MS.gene46353	PPI
MS.gene47792	MS.gene03936	PPI
MS.gene46948	MS.gene03936	PPI
MS.gene025873	MS.gene03936	PPI
MS.gene012019	MS.gene03936	PPI
MS.gene013676	MS.gene03936	PPI
MS.gene03936	MS.gene61651	PPI
MS.gene03936	MS.gene29406	PPI
MS.gene05358	MS.gene03936	PPI
MS.gene03936	MS.gene016719	PPI
MS.gene03936	MS.gene88393	PPI
MS.gene065627	MS.gene03936	PPI
MS.gene03936	MS.gene054508	PPI
MS.gene03936	MS.gene053373	PPI
MS.gene018745	MS.gene03936	PPI
MS.gene000629	MS.gene03936	PPI
MS.gene03936	MS.gene041264	PPI
MS.gene041264	MS.gene03936	PPI
MS.gene41979	MS.gene03936	PPI
MS.gene03936	MS.gene63150	PPI
MS.gene05319	MS.gene03936	PPI
MS.gene038098	MS.gene03936	PPI
MS.gene56991	MS.gene03936	PPI
MS.gene03936	MS.gene072852	PPI
MS.gene03936	MS.gene65474	PPI
MS.gene03936	MS.gene025401	PPI
MS.gene055223	MS.gene03936	PPI
MS.gene03936	MS.gene015093	PPI
MS.gene28545	MS.gene03936	PPI
MS.gene28718	MS.gene03936	PPI
MS.gene03936	MS.gene06164	PPI
MS.gene03936	MS.gene50392	PPI
MS.gene03936	MS.gene22730	PPI
MS.gene03936	MS.gene032299	PPI
MS.gene03936	MS.gene017586	PPI
MS.gene061850	MS.gene03936	PPI
MS.gene03936	MS.gene037634	PPI
MS.gene03936	MS.gene057828	PPI
MS.gene064966	MS.gene03936	PPI
MS.gene03936	MS.gene08606	PPI
MS.gene03936	MS.gene000640	PPI
MS.gene03936	MS.gene09517	PPI
MS.gene03936	MS.gene98756	PPI
MS.gene03936	MS.gene87845	PPI
MS.gene98616	MS.gene03936	PPI
MS.gene046089	MS.gene03936	PPI
MS.gene03936	MS.gene62249	PPI
MS.gene03936	MS.gene58419	PPI
MS.gene03936	MS.gene010290	PPI
MS.gene03936	MS.gene92517	PPI
MS.gene03936	MS.gene36069	PPI
MS.gene80362	MS.gene03936	PPI
MS.gene72520	MS.gene03936	PPI
MS.gene03936	MS.gene044729	PPI
MS.gene013193	MS.gene03936	PPI
MS.gene08106	MS.gene03936	PPI
MS.gene03936	MS.gene60390	PPI
MS.gene03936	MS.gene039692	PPI
MS.gene63743	MS.gene03936	PPI
MS.gene03936	MS.gene55682	PPI
MS.gene03936	MS.gene002590	PPI
MS.gene03936	MS.gene024297	PPI
MS.gene03936	MS.gene059269	PPI
MS.gene024405	MS.gene03936	PPI
MS.gene012748	MS.gene03936	PPI
MS.gene03936	MS.gene057934	PPI
MS.gene03936	MS.gene024841	PPI
MS.gene83979	MS.gene03936	PPI
MS.gene03936	MS.gene069786	PPI
MS.gene03936	MS.gene42010	PPI
MS.gene03936	MS.gene025158	PPI
MS.gene57044	MS.gene03936	PPI
MS.gene03936	MS.gene40828	PPI
MS.gene98471	MS.gene03936	PPI
MS.gene03936	MS.gene51799	PPI
MS.gene03936	MS.gene98471	PPI
MS.gene038676	MS.gene03936	PPI
MS.gene042651	MS.gene03936	PPI
MS.gene93396	MS.gene03936	PPI
MS.gene05576	MS.gene03936	PPI
MS.gene03936	MS.gene40469	PPI
MS.gene05231	MS.gene03936	PPI
MS.gene03936	MS.gene09023	PPI
MS.gene03936	MS.gene025987	PPI
MS.gene03936	MS.gene95960	PPI
MS.gene03936	MS.gene043140	PPI
MS.gene010656	MS.gene03936	PPI
MS.gene034643	MS.gene03936	PPI
MS.gene03936	MS.gene03149	PPI
MS.gene64130	MS.gene03936	PPI
MS.gene03936	MS.gene29321	PPI
MS.gene050679	MS.gene03936	PPI
MS.gene20246	MS.gene03936	PPI
MS.gene03936	MS.gene037049	PPI
MS.gene071784	MS.gene03936	PPI
MS.gene053747	MS.gene03936	PPI
MS.gene03936	MS.gene24278	PPI
MS.gene03936	MS.gene000379	PPI
MS.gene03936	MS.gene34618	PPI
MS.gene061579	MS.gene03936	PPI
MS.gene03936	MS.gene59460	PPI
MS.gene76420	MS.gene03936	PPI
MS.gene071320	MS.gene03936	PPI
MS.gene65471	MS.gene03936	PPI
MS.gene03936	MS.gene060773	PPI
MS.gene03936	MS.gene66650	PPI
MS.gene26433	MS.gene03936	PPI
MS.gene03936	MS.gene08713	PPI
MS.gene042559	MS.gene03936	PPI
MS.gene03936	MS.gene24070	PPI
MS.gene03936	MS.gene85538	PPI
MS.gene03936	MS.gene26844	PPI
MS.gene26038	MS.gene03936	PPI
MS.gene03936	MS.gene64178	PPI
MS.gene042027	MS.gene03936	PPI
MS.gene85308	MS.gene03936	PPI
MS.gene69490	MS.gene03936	PPI
MS.gene03936	MS.gene074257	PPI
MS.gene015248	MS.gene03936	PPI
MS.gene03936	MS.gene073573	PPI
MS.gene34812	MS.gene03936	PPI
MS.gene03936	MS.gene44144	PPI
MS.gene03936	MS.gene05576	PPI
MS.gene44083	MS.gene03936	PPI
MS.gene03936	MS.gene060718	PPI
MS.gene04970	MS.gene03936	PPI
MS.gene58419	MS.gene03936	PPI
MS.gene03936	MS.gene48477	PPI
MS.gene03936	MS.gene027169	PPI
MS.gene067340	MS.gene03936	PPI
MS.gene03936	MS.gene004417	PPI
MS.gene03936	MS.gene019177	PPI
MS.gene65623	MS.gene03936	PPI
MS.gene23521	MS.gene03936	PPI
MS.gene049512	MS.gene03936	PPI
MS.gene29406	MS.gene03936	PPI
MS.gene038623	MS.gene03936	PPI
MS.gene03936	MS.gene055560	PPI
MS.gene03936	MS.gene009213	PPI
MS.gene05357	MS.gene03936	PPI
MS.gene03936	MS.gene98127	PPI
MS.gene87529	MS.gene03936	PPI
MS.gene03936	MS.gene003264	PPI
MS.gene03936	MS.gene054652	PPI
MS.gene04134	MS.gene03936	PPI
MS.gene03936	MS.gene37537	PPI
MS.gene062067	MS.gene03936	PPI
MS.gene86849	MS.gene03936	PPI
MS.gene03936	MS.gene27329	PPI
MS.gene03936	MS.gene41393	PPI
MS.gene39956	MS.gene03936	PPI
MS.gene03936	MS.gene89815	PPI
MS.gene03936	MS.gene016632	PPI
MS.gene71637	MS.gene03936	PPI
MS.gene03936	MS.gene018474	PPI
MS.gene03936	MS.gene048088	PPI
MS.gene03936	MS.gene86868	PPI
MS.gene09589	MS.gene03936	PPI
MS.gene03936	MS.gene058889	PPI
MS.gene03936	MS.gene96163	PPI
MS.gene005120	MS.gene03936	PPI
MS.gene03936	MS.gene34463	PPI
MS.gene060386	MS.gene03936	PPI
MS.gene71588	MS.gene03936	PPI
MS.gene04749	MS.gene03936	PPI
MS.gene03936	MS.gene026680	PPI
MS.gene03936	MS.gene61499	PPI
MS.gene059736	MS.gene03936	PPI
MS.gene03936	MS.gene51804	PPI
MS.gene03936	MS.gene019165	PPI
MS.gene03936	MS.gene81194	PPI
MS.gene42903	MS.gene03936	PPI
MS.gene81712	MS.gene03936	PPI
MS.gene055683	MS.gene03936	PPI
MS.gene026680	MS.gene03936	PPI
MS.gene03936	MS.gene038394	PPI
MS.gene021555	MS.gene03936	PPI
MS.gene03936	MS.gene019001	PPI
MS.gene048747	MS.gene03936	PPI
MS.gene03936	MS.gene53904	PPI
MS.gene22200	MS.gene03936	PPI
MS.gene03936	MS.gene73261	PPI
MS.gene03936	MS.gene025675	PPI
MS.gene03936	MS.gene055546	PPI
MS.gene03936	MS.gene71637	PPI
MS.gene94654	MS.gene03936	PPI
MS.gene03936	MS.gene55209	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene03936.t1	MTR_3g053920	37.423	163	87	1	2	164	5	152	9.04e-38	133
MS.gene03936.t1	MTR_2g061500	41.129	124	73	0	3	126	6	129	3.42e-33	117
MS.gene03936.t1	MTR_0010s0370	32.000	175	115	2	4	174	3	177	1.41e-29	109
MS.gene03936.t1	MTR_0010s0350	32.000	175	115	2	4	174	3	177	1.41e-29	109
MS.gene03936.t1	MTR_6g033215	28.977	176	123	1	22	195	118	293	1.59e-26	103
MS.gene03936.t1	MTR_4g103530	46.667	90	48	0	55	144	4	93	1.76e-22	90.9
MS.gene03936.t1	MTR_7g011710	42.045	88	51	0	52	139	1	88	8.98e-20	82.8
MS.gene03936.t1	MTR_1g036720	27.103	107	76	1	5	109	4	110	7.70e-12	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene03936.t1	AT3G31430	27.027	148	102	3	69	214	170	313	2.54e-14	71.2

Find 55 sgRNAs with CRISPR-Local

Find 57 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTGGATTCTCCTTATCAAAT+AGG	0.270270	3.2:+55577788	None:intergenic
AAATTAAGATAAACATTCTT+AGG	0.288740	3.2:+55578105	None:intergenic
CAAGTGCATAACCTTCCTTT+TGG	0.298054	3.2:-55578066	MS.gene03936:CDS
ACCACTTAAACAAGATTTGC+AGG	0.310094	3.2:-55577920	MS.gene03936:CDS
GATCCAAGATGGTCGAAGTT+TGG	0.363524	3.2:+55578361	None:intergenic
AGGAACAGCTGGGCACTTCT+TGG	0.363953	3.2:-55578284	MS.gene03936:CDS
ACCTGCAAATCTTGTTTAAG+TGG	0.371449	3.2:+55577919	None:intergenic
ACATTCTTAGGAACCATTCC+TGG	0.380386	3.2:+55578117	None:intergenic
CACTTCTTGGAGGTTGGTGA+AGG	0.396642	3.2:-55578271	MS.gene03936:CDS
GGCTTATCTCAAGGAACAGC+TGG	0.405289	3.2:-55578295	MS.gene03936:CDS
AAAATATCTTTCTAAAAGAC+TGG	0.412326	3.2:+55577769	None:intergenic
AGGTATATGTTTCCAGTTGT+AGG	0.418631	3.2:+55578234	None:intergenic
TGGTAAGTACCTTGGAGAAC+TGG	0.421913	3.2:-55578013	MS.gene03936:CDS
TCTTGTGAGTGAATTGAAAC+AGG	0.428370	3.2:+55578214	None:intergenic
GTCATTGAAATTATTGCTCC+AGG	0.433628	3.2:-55578135	MS.gene03936:CDS
TTGTGAAATCCTATTTGATA+AGG	0.433773	3.2:-55577797	MS.gene03936:CDS
ATCACAGTTATACCTACAAC+TGG	0.439649	3.2:-55578246	MS.gene03936:CDS
TGTCCAAACTTCGACCATCT+TGG	0.441314	3.2:-55578364	MS.gene03936:CDS
GACAGATGCGTCAAGGTTCA+AGG	0.450026	3.2:+55578383	None:intergenic
TTTCACAAGTACGGTCAGTA+TGG	0.457126	3.2:+55577812	None:intergenic
AGCCAATCGCACACCCTTGT+CGG	0.463403	3.2:+55578314	None:intergenic
CGATCTTGATGGTTTGACCT+TGG	0.465702	3.2:-55578421	MS.gene03936:CDS
TCTTGATGGTTTGACCTTGG+AGG	0.471139	3.2:-55578418	MS.gene03936:CDS
ACCATGGATATCGATCTTGA+TGG	0.471723	3.2:-55578432	MS.gene03936:CDS
AACAGCTGGGCACTTCTTGG+AGG	0.481954	3.2:-55578281	MS.gene03936:CDS
TTTATTCTCGTGGTGGAGAG+TGG	0.489142	3.2:-55577897	MS.gene03936:CDS
ATCCGACAAGGGTGTGCGAT+TGG	0.501301	3.2:-55578316	MS.gene03936:CDS
CAAATAGGATTTCACAAGTA+CGG	0.516989	3.2:+55577803	None:intergenic
GCTGGGCACTTCTTGGAGGT+TGG	0.520282	3.2:-55578277	MS.gene03936:CDS
GTTGTATAAACCCAAAAGGA+AGG	0.521586	3.2:+55578055	None:intergenic
TGAAATTATTGCTCCAGGAA+TGG	0.527151	3.2:-55578130	MS.gene03936:CDS
TGGTTTGACCTTGGAGGACG+AGG	0.528611	3.2:-55578412	MS.gene03936:CDS
ACTTCTTGGAGGTTGGTGAA+GGG	0.533895	3.2:-55578270	MS.gene03936:CDS
ATCTTGGATCATTGTCTGAT+CGG	0.544005	3.2:-55578348	MS.gene03936:CDS
CAGTTTGTTCACGAAGCGAA+AGG	0.544626	3.2:-55577962	MS.gene03936:CDS
TTATTCTCGTGGTGGAGAGT+GGG	0.553171	3.2:-55577896	MS.gene03936:CDS
GATTTGCAGGTTTATTCTCG+TGG	0.556064	3.2:-55577907	MS.gene03936:CDS
ACATGATGAAGGGTGGACCT+TGG	0.561440	3.2:-55578179	MS.gene03936:CDS
GAAGCCATTGGTAAGTACCT+TGG	0.564143	3.2:-55578021	MS.gene03936:CDS
TTCTCCAAGGTACTTACCAA+TGG	0.565889	3.2:+55578017	None:intergenic
TGACGCTGAAAACATGATGA+AGG	0.566730	3.2:-55578190	MS.gene03936:CDS
CGGATGCATGCTATCCGACA+AGG	0.576689	3.2:-55578328	MS.gene03936:CDS
GGTCATAACCTCGTCCTCCA+AGG	0.596650	3.2:+55578404	None:intergenic
TGTGCGATTGGCTTATCTCA+AGG	0.596876	3.2:-55578304	MS.gene03936:CDS
TTGCAGGTTTATTCTCGTGG+TGG	0.604086	3.2:-55577904	MS.gene03936:CDS
AAGTTTGGACAGATGCGTCA+AGG	0.608480	3.2:+55578376	None:intergenic
CAAAAGGTAAGTGAAGCCAT+TGG	0.619195	3.2:-55578033	MS.gene03936:CDS
GATCAGACAATGATCCAAGA+TGG	0.620594	3.2:+55578350	None:intergenic
TTATAGCTGTCATACGTCCA+AGG	0.629226	3.2:+55578162	None:intergenic
CATACTCGACCAGTTCTCCA+AGG	0.638239	3.2:+55578004	None:intergenic
ACCATCAAGATCGATATCCA+TGG	0.640079	3.2:+55578431	None:intergenic
GCTTATCTCAAGGAACAGCT+GGG	0.641126	3.2:-55578294	MS.gene03936:CDS
GACGCTGAAAACATGATGAA+GGG	0.686342	3.2:-55578189	MS.gene03936:CDS
GGATGCATGCTATCCGACAA+GGG	0.696542	3.2:-55578327	MS.gene03936:CDS
GCTGAAAACATGATGAAGGG+TGG	0.699446	3.2:-55578186	MS.gene03936:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATTAAGATAAACATTCTT+AGG	+	chr3.2:55578107-55578126	None:intergenic	15.0%
!	TTGTGAAATCCTATTTGATA+AGG	-	chr3.2:55578412-55578431	MS.gene03936:CDS	25.0%
!!	CGATTTTGTTCAAATACAAA+AGG	-	chr3.2:55578339-55578358	MS.gene03936:CDS	25.0%
!!!	TTTTGGGTTTATACAACAAA+AGG	-	chr3.2:55578160-55578179	MS.gene03936:CDS	25.0%
!!!	TTTTGTTGTATAAACCCAAA+AGG	+	chr3.2:55578161-55578180	None:intergenic	25.0%
	CAAATAGGATTTCACAAGTA+CGG	+	chr3.2:55578409-55578428	None:intergenic	30.0%
	ACCACTTAAACAAGATTTGC+AGG	-	chr3.2:55578289-55578308	MS.gene03936:CDS	35.0%
	AGGTATATGTTTCCAGTTGT+AGG	+	chr3.2:55577978-55577997	None:intergenic	35.0%
	ATCACAGTTATACCTACAAC+TGG	-	chr3.2:55577963-55577982	MS.gene03936:CDS	35.0%
	ATCTTGGATCATTGTCTGAT+CGG	-	chr3.2:55577861-55577880	MS.gene03936:CDS	35.0%
	CTGGATTCTCCTTATCAAAT+AGG	+	chr3.2:55578424-55578443	None:intergenic	35.0%
	GTCATTGAAATTATTGCTCC+AGG	-	chr3.2:55578074-55578093	MS.gene03936:CDS	35.0%
	GTTGTATAAACCCAAAAGGA+AGG	+	chr3.2:55578157-55578176	None:intergenic	35.0%
	TCTTGTGAGTGAATTGAAAC+AGG	+	chr3.2:55577998-55578017	None:intergenic	35.0%
	TGAAATTATTGCTCCAGGAA+TGG	-	chr3.2:55578079-55578098	MS.gene03936:CDS	35.0%
!	AAGTGCATAACCTTCCTTTT+GGG	-	chr3.2:55578144-55578163	MS.gene03936:CDS	35.0%
!	ACCTGCAAATCTTGTTTAAG+TGG	+	chr3.2:55578293-55578312	None:intergenic	35.0%
!!	GAAACTTTTTGCTATGTGTG+TGG	-	chr3.2:55578365-55578384	MS.gene03936:CDS	35.0%
	ACATTCTTAGGAACCATTCC+TGG	+	chr3.2:55578095-55578114	None:intergenic	40.0%
	CAAAAGGTAAGTGAAGCCAT+TGG	-	chr3.2:55578176-55578195	MS.gene03936:CDS	40.0%
	GACGCTGAAAACATGATGAA+GGG	-	chr3.2:55578020-55578039	MS.gene03936:CDS	40.0%
	GATCAGACAATGATCCAAGA+TGG	+	chr3.2:55577862-55577881	None:intergenic	40.0%
	GATTTGCAGGTTTATTCTCG+TGG	-	chr3.2:55578302-55578321	MS.gene03936:CDS	40.0%
	TGACGCTGAAAACATGATGA+AGG	-	chr3.2:55578019-55578038	MS.gene03936:CDS	40.0%
	TTATAGCTGTCATACGTCCA+AGG	+	chr3.2:55578050-55578069	None:intergenic	40.0%
	TTTCACAAGTACGGTCAGTA+TGG	+	chr3.2:55578400-55578419	None:intergenic	40.0%
!	CAAGTGCATAACCTTCCTTT+TGG	-	chr3.2:55578143-55578162	MS.gene03936:CDS	40.0%
!	TTCTCCAAGGTACTTACCAA+TGG	+	chr3.2:55578195-55578214	None:intergenic	40.0%
	AAGTTTGGACAGATGCGTCA+AGG	+	chr3.2:55577836-55577855	None:intergenic	45.0%
	GAAGCCATTGGTAAGTACCT+TGG	-	chr3.2:55578188-55578207	MS.gene03936:CDS	45.0%
	GATCCAAGATGGTCGAAGTT+TGG	+	chr3.2:55577851-55577870	None:intergenic	45.0%
	GCTGAAAACATGATGAAGGG+TGG	-	chr3.2:55578023-55578042	MS.gene03936:CDS	45.0%
	GCTTATCTCAAGGAACAGCT+GGG	-	chr3.2:55577915-55577934	MS.gene03936:CDS	45.0%
	TGGTAAGTACCTTGGAGAAC+TGG	-	chr3.2:55578196-55578215	MS.gene03936:CDS	45.0%
	TGTCCAAACTTCGACCATCT+TGG	-	chr3.2:55577845-55577864	MS.gene03936:CDS	45.0%
	TTGCAGGTTTATTCTCGTGG+TGG	-	chr3.2:55578305-55578324	MS.gene03936:CDS	45.0%
!	CAGTTTGTTCACGAAGCGAA+AGG	-	chr3.2:55578247-55578266	MS.gene03936:CDS	45.0%
!	CGATCTTGATGGTTTGACCT+TGG	-	chr3.2:55577788-55577807	MS.gene03936:CDS	45.0%
!	TCTTGATGGTTTGACCTTGG+AGG	-	chr3.2:55577791-55577810	MS.gene03936:CDS	45.0%
!	TTATTCTCGTGGTGGAGAGT+GGG	-	chr3.2:55578313-55578332	MS.gene03936:CDS	45.0%
!	TTTATTCTCGTGGTGGAGAG+TGG	-	chr3.2:55578312-55578331	MS.gene03936:CDS	45.0%
!!	ACTTCTTGGAGGTTGGTGAA+GGG	-	chr3.2:55577939-55577958	MS.gene03936:CDS	45.0%
!!	TGTGCGATTGGCTTATCTCA+AGG	-	chr3.2:55577905-55577924	MS.gene03936:CDS	45.0%
	ACATGATGAAGGGTGGACCT+TGG	-	chr3.2:55578030-55578049	MS.gene03936:CDS	50.0%
	CATACTCGACCAGTTCTCCA+AGG	+	chr3.2:55578208-55578227	None:intergenic	50.0%
	GACAGATGCGTCAAGGTTCA+AGG	+	chr3.2:55577829-55577848	None:intergenic	50.0%
	GGATGCATGCTATCCGACAA+GGG	-	chr3.2:55577882-55577901	MS.gene03936:CDS	50.0%
	GGCTTATCTCAAGGAACAGC+TGG	-	chr3.2:55577914-55577933	MS.gene03936:CDS	50.0%
!!	CACTTCTTGGAGGTTGGTGA+AGG	-	chr3.2:55577938-55577957	MS.gene03936:CDS	50.0%
	AACAGCTGGGCACTTCTTGG+AGG	-	chr3.2:55577928-55577947	MS.gene03936:CDS	55.0%
	AGCCAATCGCACACCCTTGT+CGG	+	chr3.2:55577898-55577917	None:intergenic	55.0%
	AGGAACAGCTGGGCACTTCT+TGG	-	chr3.2:55577925-55577944	MS.gene03936:CDS	55.0%
	CGGATGCATGCTATCCGACA+AGG	-	chr3.2:55577881-55577900	MS.gene03936:CDS	55.0%
	GGTCATAACCTCGTCCTCCA+AGG	+	chr3.2:55577808-55577827	None:intergenic	55.0%
	TGGTTTGACCTTGGAGGACG+AGG	-	chr3.2:55577797-55577816	MS.gene03936:CDS	55.0%
!	ATCCGACAAGGGTGTGCGAT+TGG	-	chr3.2:55577893-55577912	MS.gene03936:CDS	55.0%
	GCTGGGCACTTCTTGGAGGT+TGG	-	chr3.2:55577932-55577951	MS.gene03936:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.2	gene	55577780	55578451	55577780	ID=MS.gene03936
chr3.2	mRNA	55577780	55578451	55577780	ID=MS.gene03936.t1;Parent=MS.gene03936
chr3.2	exon	55577780	55578451	55577780	ID=MS.gene03936.t1.exon1;Parent=MS.gene03936.t1
chr3.2	CDS	55577780	55578451	55577780	ID=cds.MS.gene03936.t1;Parent=MS.gene03936.t1

Gene Sequence

>MS.gene03936

ATGGATATCGATCTTGATGGTTTGACCTTGGAGGACGAGGTTATGACCTTGAACCTTGACGCATCTGTCCAAACTTCGACCATCTTGGATCATTGTCTGATCGGATGCATGCTATCCGACAAGGGTGTGCGATTGGCTTATCTCAAGGAACAGCTGGGCACTTCTTGGAGGTTGGTGAAGGGTATCACAGTTATACCTACAACTGGAAACATATACCTGTTTCAATTCACTCACAAGAATGACGCTGAAAACATGATGAAGGGTGGACCTTGGACGTATGACAGCTATAATCTAGTCATTGAAATTATTGCTCCAGGAATGGTTCCTAAGAATGTTTATCTTAATTTTCTGAACATTTGTGTGCAAGTGCATAACCTTCCTTTTGGGTTTATACAACAAAAGGTAAGTGAAGCCATTGGTAAGTACCTTGGAGAACTGGTCGAGTATGACAGTAAGAACACTATTCACAGTTTGTTCACGAAGCGAAAGGTTCGAATCAATGTAATACAACCACTTAAACAAGATTTGCAGGTTTATTCTCGTGGTGGAGAGTGGGTTTCGATTTTGTTCAAATACAAAAGGCTTGAAACTTTTTGCTATGTGTGTGGAGTTCTTGACCATACTGACCGTACTTGTGAAATCCTATTTGATAAGGAGAATCCAGTCTTTTAG

Protein sequence

>MS.gene03936.t1

MDIDLDGLTLEDEVMTLNLDASVQTSTILDHCLIGCMLSDKGVRLAYLKEQLGTSWRLVKGITVIPTTGNIYLFQFTHKNDAENMMKGGPWTYDSYNLVIEIIAPGMVPKNVYLNFLNICVQVHNLPFGFIQQKVSEAIGKYLGELVEYDSKNTIHSLFTKRKVRINVIQPLKQDLQVYSRGGEWVSILFKYKRLETFCYVCGVLDHTDRTCEILFDKENPVF