AlfalfaGEDB | MS.gene027994

M. sativa cultivar XinJiangDaYe / MS.gene027994

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene027994.t1	AES70414.1	48.5	235	43	4	1	182	71	280	1.50E-41	179.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene027994.t1	G7J017	48.5	235	43	4	1	182	71	280	1.1e-41	179.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene027994	MS.gene025987	PPI
MS.gene41393	MS.gene027994	PPI
MS.gene39956	MS.gene027994	PPI
MS.gene027994	MS.gene043140	PPI
MS.gene021968	MS.gene027994	PPI
MS.gene98756	MS.gene027994	PPI
MS.gene027994	MS.gene03149	PPI
MS.gene09589	MS.gene027994	PPI
MS.gene44144	MS.gene027994	PPI
MS.gene43393	MS.gene027994	PPI
MS.gene057828	MS.gene027994	PPI
MS.gene044729	MS.gene027994	PPI
MS.gene66650	MS.gene027994	PPI
MS.gene027994	MS.gene24278	PPI
MS.gene005120	MS.gene027994	PPI
MS.gene027994	MS.gene000379	PPI
MS.gene86868	MS.gene027994	PPI
MS.gene027994	MS.gene59460	PPI
MS.gene048072	MS.gene027994	PPI
MS.gene060386	MS.gene027994	PPI
MS.gene71588	MS.gene027994	PPI
MS.gene04749	MS.gene027994	PPI
MS.gene05436	MS.gene027994	PPI
MS.gene059736	MS.gene027994	PPI
MS.gene70932	MS.gene027994	PPI
MS.gene027169	MS.gene027994	PPI
MS.gene62249	MS.gene027994	PPI
MS.gene81194	MS.gene027994	PPI
MS.gene025675	MS.gene027994	PPI
MS.gene42903	MS.gene027994	PPI
MS.gene81712	MS.gene027994	PPI
MS.gene021965	MS.gene027994	PPI
MS.gene055683	MS.gene027994	PPI
MS.gene042614	MS.gene027994	PPI
MS.gene41643	MS.gene027994	PPI
MS.gene26844	MS.gene027994	PPI
MS.gene021555	MS.gene027994	PPI
MS.gene060773	MS.gene027994	PPI
MS.gene048747	MS.gene027994	PPI
MS.gene021647	MS.gene027994	PPI
MS.gene69584	MS.gene027994	PPI
MS.gene027994	MS.gene44144	PPI
MS.gene019165	MS.gene027994	PPI
MS.gene048706	MS.gene027994	PPI
MS.gene009121	MS.gene027994	PPI
MS.gene94654	MS.gene027994	PPI
MS.gene024841	MS.gene027994	PPI
MS.gene073573	MS.gene027994	PPI
MS.gene51804	MS.gene027994	PPI
MS.gene031967	MS.gene027994	PPI
MS.gene87845	MS.gene027994	PPI
MS.gene36069	MS.gene027994	PPI
MS.gene97410	MS.gene027994	PPI
MS.gene83772	MS.gene027994	PPI
MS.gene32415	MS.gene027994	PPI
MS.gene009213	MS.gene027994	PPI
MS.gene060788	MS.gene027994	PPI
MS.gene035626	MS.gene027994	PPI
MS.gene008927	MS.gene027994	PPI
MS.gene045614	MS.gene027994	PPI
MS.gene009781	MS.gene027994	PPI
MS.gene63762	MS.gene027994	PPI
MS.gene27329	MS.gene027994	PPI
MS.gene71675	MS.gene027994	PPI
MS.gene30208	MS.gene027994	PPI
MS.gene028716	MS.gene027994	PPI
MS.gene21066	MS.gene027994	PPI
MS.gene06164	MS.gene027994	PPI
MS.gene013676	MS.gene027994	PPI
MS.gene55209	MS.gene027994	PPI
MS.gene64178	MS.gene027994	PPI
MS.gene030090	MS.gene027994	PPI
MS.gene95561	MS.gene027994	PPI
MS.gene96174	MS.gene027994	PPI
MS.gene027994	MS.gene018474	PPI
MS.gene027994	MS.gene86868	PPI
MS.gene018196	MS.gene027994	PPI
MS.gene065627	MS.gene027994	PPI
MS.gene57019	MS.gene027994	PPI
MS.gene010890	MS.gene027994	PPI
MS.gene018745	MS.gene027994	PPI
MS.gene65546	MS.gene027994	PPI
MS.gene000506	MS.gene027994	PPI
MS.gene74639	MS.gene027994	PPI
MS.gene032299	MS.gene027994	PPI
MS.gene03936	MS.gene027994	PPI
MS.gene038098	MS.gene027994	PPI
MS.gene60059	MS.gene027994	PPI
MS.gene062511	MS.gene027994	PPI
MS.gene22111	MS.gene027994	PPI
MS.gene34197	MS.gene027994	PPI
MS.gene28718	MS.gene027994	PPI
MS.gene055560	MS.gene027994	PPI
MS.gene008275	MS.gene027994	PPI
MS.gene027994	MS.gene61499	PPI
MS.gene34618	MS.gene027994	PPI
MS.gene59460	MS.gene027994	PPI
MS.gene038757	MS.gene027994	PPI
MS.gene064966	MS.gene027994	PPI
MS.gene069624	MS.gene027994	PPI
MS.gene016632	MS.gene027994	PPI
MS.gene002590	MS.gene027994	PPI
MS.gene025987	MS.gene027994	PPI
MS.gene000640	MS.gene027994	PPI
MS.gene43924	MS.gene027994	PPI
MS.gene046089	MS.gene027994	PPI
MS.gene047954	MS.gene027994	PPI
MS.gene35175	MS.gene027994	PPI
MS.gene77990	MS.gene027994	PPI
MS.gene036423	MS.gene027994	PPI
MS.gene069786	MS.gene027994	PPI
MS.gene054652	MS.gene027994	PPI
MS.gene013644	MS.gene027994	PPI
MS.gene013890	MS.gene027994	PPI
MS.gene61651	MS.gene027994	PPI
MS.gene66651	MS.gene027994	PPI
MS.gene96109	MS.gene027994	PPI
MS.gene35202	MS.gene027994	PPI
MS.gene051449	MS.gene027994	PPI
MS.gene015093	MS.gene027994	PPI
MS.gene007022	MS.gene027994	PPI
MS.gene027994	MS.gene022929	PPI
MS.gene63743	MS.gene027994	PPI
MS.gene48477	MS.gene027994	PPI
MS.gene045875	MS.gene027994	PPI
MS.gene038394	MS.gene027994	PPI
MS.gene30136	MS.gene027994	PPI
MS.gene027994	MS.gene048342	PPI
MS.gene95960	MS.gene027994	PPI
MS.gene008861	MS.gene027994	PPI
MS.gene61452	MS.gene027994	PPI
MS.gene73261	MS.gene027994	PPI
MS.gene024297	MS.gene027994	PPI
MS.gene027994	MS.gene21066	PPI
MS.gene016102	MS.gene027994	PPI
MS.gene46941	MS.gene027994	PPI
MS.gene96541	MS.gene027994	PPI
MS.gene049561	MS.gene027994	PPI
MS.gene45083	MS.gene027994	PPI
MS.gene000634	MS.gene027994	PPI
MS.gene85295	MS.gene027994	PPI
MS.gene60390	MS.gene027994	PPI
MS.gene47792	MS.gene027994	PPI
MS.gene46948	MS.gene027994	PPI
MS.gene98471	MS.gene027994	PPI
MS.gene025873	MS.gene027994	PPI
MS.gene012019	MS.gene027994	PPI
MS.gene027994	MS.gene008658	PPI
MS.gene025401	MS.gene027994	PPI
MS.gene05358	MS.gene027994	PPI
MS.gene93396	MS.gene027994	PPI
MS.gene074257	MS.gene027994	PPI
MS.gene010656	MS.gene027994	PPI
MS.gene000629	MS.gene027994	PPI
MS.gene09023	MS.gene027994	PPI
MS.gene059269	MS.gene027994	PPI
MS.gene40469	MS.gene027994	PPI
MS.gene041264	MS.gene027994	PPI
MS.gene41979	MS.gene027994	PPI
MS.gene024522	MS.gene027994	PPI
MS.gene05319	MS.gene027994	PPI
MS.gene88393	MS.gene027994	PPI
MS.gene56991	MS.gene027994	PPI
MS.gene85538	MS.gene027994	PPI
MS.gene055223	MS.gene027994	PPI
MS.gene28545	MS.gene027994	PPI
MS.gene053747	MS.gene027994	PPI
MS.gene29321	MS.gene027994	PPI
MS.gene027994	MS.gene74639	PPI
MS.gene027994	MS.gene071133	PPI
MS.gene65471	MS.gene027994	PPI
MS.gene061850	MS.gene027994	PPI
MS.gene048088	MS.gene027994	PPI
MS.gene008658	MS.gene027994	PPI
MS.gene018474	MS.gene027994	PPI
MS.gene027994	MS.gene37955	PPI
MS.gene003264	MS.gene027994	PPI
MS.gene073582	MS.gene027994	PPI
MS.gene058889	MS.gene027994	PPI
MS.gene027994	MS.gene84790	PPI
MS.gene98616	MS.gene027994	PPI
MS.gene40828	MS.gene027994	PPI
MS.gene53904	MS.gene027994	PPI
MS.gene08708	MS.gene027994	PPI
MS.gene09517	MS.gene027994	PPI
MS.gene69586	MS.gene027994	PPI
MS.gene042027	MS.gene027994	PPI
MS.gene69490	MS.gene027994	PPI
MS.gene043140	MS.gene027994	PPI
MS.gene015248	MS.gene027994	PPI
MS.gene84790	MS.gene027994	PPI
MS.gene80362	MS.gene027994	PPI
MS.gene72520	MS.gene027994	PPI
MS.gene44083	MS.gene027994	PPI
MS.gene37537	MS.gene027994	PPI
MS.gene013193	MS.gene027994	PPI
MS.gene04970	MS.gene027994	PPI
MS.gene08106	MS.gene027994	PPI
MS.gene24278	MS.gene027994	PPI
MS.gene025158	MS.gene027994	PPI
MS.gene61499	MS.gene027994	PPI
MS.gene068629	MS.gene027994	PPI
MS.gene019001	MS.gene027994	PPI
MS.gene027994	MS.gene007022	PPI
MS.gene96163	MS.gene027994	PPI
MS.gene08713	MS.gene027994	PPI
MS.gene23521	MS.gene027994	PPI
MS.gene63150	MS.gene027994	PPI
MS.gene54051	MS.gene027994	PPI
MS.gene98127	MS.gene027994	PPI
MS.gene03149	MS.gene027994	PPI
MS.gene87529	MS.gene027994	PPI
MS.gene024405	MS.gene027994	PPI
MS.gene012748	MS.gene027994	PPI
MS.gene04134	MS.gene027994	PPI
MS.gene027994	MS.gene61651	PPI
MS.gene83979	MS.gene027994	PPI
MS.gene062067	MS.gene027994	PPI
MS.gene92517	MS.gene027994	PPI
MS.gene057934	MS.gene027994	PPI
MS.gene57044	MS.gene027994	PPI
MS.gene027994	MS.gene88393	PPI
MS.gene054508	MS.gene027994	PPI
MS.gene89815	MS.gene027994	PPI
MS.gene028714	MS.gene027994	PPI
MS.gene049610	MS.gene027994	PPI
MS.gene017586	MS.gene027994	PPI
MS.gene038676	MS.gene027994	PPI
MS.gene060718	MS.gene027994	PPI
MS.gene71637	MS.gene027994	PPI
MS.gene042651	MS.gene027994	PPI
MS.gene05576	MS.gene027994	PPI
MS.gene52349	MS.gene027994	PPI
MS.gene05231	MS.gene027994	PPI
MS.gene98467	MS.gene027994	PPI
MS.gene46353	MS.gene027994	PPI
MS.gene027994	MS.gene015093	PPI
MS.gene42010	MS.gene027994	PPI
MS.gene037049	MS.gene027994	PPI
MS.gene034643	MS.gene027994	PPI
MS.gene037634	MS.gene027994	PPI
MS.gene000379	MS.gene027994	PPI
MS.gene048342	MS.gene027994	PPI
MS.gene64130	MS.gene027994	PPI
MS.gene050679	MS.gene027994	PPI
MS.gene24070	MS.gene027994	PPI
MS.gene60266	MS.gene027994	PPI
MS.gene027994	MS.gene08606	PPI
MS.gene20246	MS.gene027994	PPI
MS.gene027994	MS.gene000640	PPI
MS.gene016719	MS.gene027994	PPI
MS.gene027994	MS.gene09517	PPI
MS.gene010290	MS.gene027994	PPI
MS.gene071784	MS.gene027994	PPI
MS.gene061579	MS.gene027994	PPI
MS.gene039692	MS.gene027994	PPI
MS.gene76420	MS.gene027994	PPI
MS.gene071320	MS.gene027994	PPI
MS.gene022929	MS.gene027994	PPI
MS.gene027994	MS.gene62249	PPI
MS.gene026680	MS.gene027994	PPI
MS.gene26433	MS.gene027994	PPI
MS.gene34463	MS.gene027994	PPI
MS.gene22730	MS.gene027994	PPI
MS.gene042559	MS.gene027994	PPI
MS.gene22200	MS.gene027994	PPI
MS.gene071133	MS.gene027994	PPI
MS.gene055546	MS.gene027994	PPI
MS.gene26038	MS.gene027994	PPI
MS.gene027994	MS.gene60390	PPI
MS.gene08606	MS.gene027994	PPI
MS.gene85308	MS.gene027994	PPI
MS.gene49057	MS.gene027994	PPI
MS.gene012889	MS.gene027994	PPI
MS.gene053373	MS.gene027994	PPI
MS.gene34812	MS.gene027994	PPI
MS.gene02896	MS.gene027994	PPI
MS.gene063214	MS.gene027994	PPI
MS.gene55682	MS.gene027994	PPI
MS.gene51799	MS.gene027994	PPI
MS.gene58419	MS.gene027994	PPI
MS.gene067340	MS.gene027994	PPI
MS.gene65623	MS.gene027994	PPI
MS.gene65474	MS.gene027994	PPI
MS.gene019177	MS.gene027994	PPI
MS.gene69495	MS.gene027994	PPI
MS.gene027994	MS.gene025158	PPI
MS.gene049512	MS.gene027994	PPI
MS.gene29406	MS.gene027994	PPI
MS.gene038623	MS.gene027994	PPI
MS.gene86275	MS.gene027994	PPI
MS.gene05357	MS.gene027994	PPI
MS.gene032311	MS.gene027994	PPI
MS.gene004417	MS.gene027994	PPI
MS.gene86849	MS.gene027994	PPI
MS.gene50392	MS.gene027994	PPI
MS.gene37955	MS.gene027994	PPI
MS.gene072852	MS.gene027994	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene027994.t1	MTR_3g053920	47.234	235	46	4	1	182	71	280	1.79e-53	174
MS.gene027994.t1	MTR_8g463110	78.000	100	22	0	145	244	21	120	3.38e-34	129

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 69 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTCACGATGGTGTCCGTAAC+TGG	0.222649	5.2:+19309894	MS.gene027994:CDS
GAATTTGCAGCAGTAGTAAA+AGG	0.292724	5.2:-19310280	None:intergenic
GATGAGGGAAATACAGTAAT+AGG	0.305593	5.2:+19310391	MS.gene027994:CDS
AACACACCACTCTTGTTTCC+AGG	0.326055	5.2:-19309747	None:intergenic
CACCTTCAGCAGTTGCATTT+CGG	0.329131	5.2:-19310033	None:intergenic
CTGGTGCTTGGACTGTCTGC+AGG	0.393456	5.2:+19310250	MS.gene027994:CDS
CCTACTTGGCCTCTGGTGCT+TGG	0.396214	5.2:+19310238	MS.gene027994:CDS
GCCAAAGCAAAACAAGGTTC+TGG	0.414080	5.2:+19310145	MS.gene027994:CDS
GGTCTAATCTGCTTCCTACT+TGG	0.414677	5.2:+19310224	MS.gene027994:CDS
CTCTTACCGTCCTCTTCAAT+AGG	0.438370	5.2:+19310193	MS.gene027994:CDS
GCAAATTCTCAAGAGGAAAT+CGG	0.445460	5.2:+19310295	MS.gene027994:CDS
TCTGCTTCCTACTTGGCCTC+TGG	0.449798	5.2:+19310231	MS.gene027994:CDS
GCAGCAGTAGTAAAAGGAAA+TGG	0.452091	5.2:-19310274	None:intergenic
GTTGTTGTTGCTGCCTCTGT+TGG	0.459303	5.2:+19310010	MS.gene027994:CDS
TCGGTACTGCTGCAACCAAC+AGG	0.460210	5.2:+19309948	MS.gene027994:CDS
TCCTCTTCAATAGGTAACTC+AGG	0.467741	5.2:+19310202	MS.gene027994:CDS
TGAGATAAGCACCCCAGTTA+CGG	0.479656	5.2:-19309907	None:intergenic
CAGCAACAACAACATTTGTA+TGG	0.489185	5.2:-19310000	None:intergenic
TGCAACCAACAGGTGGATAC+AGG	0.492385	5.2:+19309958	MS.gene027994:CDS
TGCAACTGCTGAAGGTGTAC+TGG	0.493342	5.2:+19310039	MS.gene027994:CDS
TCACGATGGTGTCCGTAACT+GGG	0.503310	5.2:+19309895	MS.gene027994:CDS
GTGTGGTGTGCTCGGACATA+CGG	0.504521	5.2:+19309838	MS.gene027994:CDS
CCAAGCACCAGAGGCCAAGT+AGG	0.508320	5.2:-19310238	None:intergenic
TAGGAACAAATGTTAGTCAT+GGG	0.515296	5.2:+19310410	MS.gene027994:CDS
ACATACGGACAAGGTGTGTC+CGG	0.515722	5.2:+19309853	MS.gene027994:CDS
ACCATCCTGTCATTGAAGCT+TGG	0.516139	5.2:-19310064	None:intergenic
GTACCGATACGTTGCAAAGT+AGG	0.518389	5.2:-19309932	None:intergenic
GAAGAAAATAAAGAGGATGC+TGG	0.533193	5.2:+19310327	MS.gene027994:CDS
TGGTTCCAAGCTTCAATGAC+AGG	0.533487	5.2:+19310059	MS.gene027994:CDS
GGTAAGAGATGTACCATGCT+TGG	0.533806	5.2:-19310178	None:intergenic
TGTCACAGGTGTGGTGTGCT+CGG	0.535855	5.2:+19309830	MS.gene027994:intron
ATAGGAACAAATGTTAGTCA+TGG	0.543713	5.2:+19310409	MS.gene027994:CDS
ATGAATTGTCACCATTCTGA+AGG	0.545818	5.2:-19310351	None:intergenic
GCTTTCAATTCAAATAGCTC+CGG	0.548825	5.2:-19309872	None:intergenic
CCCTGAGTTACCTATTGAAG+AGG	0.549181	5.2:-19310203	None:intergenic
GCAGCACGTGTTCACGATGA+AGG	0.550833	5.2:+19309479	MS.gene027994:CDS
CAATTGATGTGACTGTTCCC+TGG	0.553030	5.2:+19309729	MS.gene027994:CDS
TACTGCTGCAAATTCTCAAG+AGG	0.568886	5.2:+19310288	MS.gene027994:CDS
TGCGACACAGATACGCATAT+AGG	0.569083	5.2:-19309708	None:intergenic
CTGAATTGAAGAAAATAAAG+AGG	0.569177	5.2:+19310320	MS.gene027994:CDS
CACGTGCTGCATCAACTTTG+TGG	0.573822	5.2:-19309466	None:intergenic
AAGCCTACTTTGCAACGTAT+CGG	0.575843	5.2:+19309929	MS.gene027994:CDS
AACTAGGTCAAGGCATAGGA+AGG	0.583747	5.2:+19309636	MS.gene027994:intron
ACACACCACTCTTGTTTCCA+GGG	0.587150	5.2:-19309746	None:intergenic
AGGATGCTGGCCCTTCAGAA+TGG	0.591615	5.2:+19310340	MS.gene027994:CDS
GGCCGAAATGCAACTGCTGA+AGG	0.603886	5.2:+19310031	MS.gene027994:CDS
TGGTGCGAACTCTCCAAGCA+TGG	0.607536	5.2:+19310165	MS.gene027994:CDS
AACATCCTGTATCCACCTGT+TGG	0.609489	5.2:-19309963	None:intergenic
CACGATGGTGTCCGTAACTG+GGG	0.611811	5.2:+19309896	MS.gene027994:CDS
TCCAAGCTTCAATGACAGGA+TGG	0.614971	5.2:+19310063	MS.gene027994:CDS
TTTGCTGCTGATGAGGATGA+GGG	0.616001	5.2:+19310376	MS.gene027994:CDS
CCAAAACTAGGTCAAGGCAT+AGG	0.620618	5.2:+19309632	MS.gene027994:intron
AGGAACAAATGTTAGTCATG+GGG	0.621613	5.2:+19310411	MS.gene027994:CDS
GGAACAAATGTTAGTCATGG+GGG	0.626566	5.2:+19310412	MS.gene027994:CDS
CCTCTTCAATAGGTAACTCA+GGG	0.631432	5.2:+19310203	MS.gene027994:CDS
TGAATTGTCACCATTCTGAA+GGG	0.638224	5.2:-19310350	None:intergenic
GCAGACAGTCCAAGCACCAG+AGG	0.645936	5.2:-19310247	None:intergenic
GTACTGCTGCAACCAACAGG+TGG	0.653037	5.2:+19309951	MS.gene027994:CDS
ACAACAACATTTGTATGGCG+CGG	0.656084	5.2:-19309995	None:intergenic
TAGGCTGCCAAAGCAAAACA+AGG	0.657259	5.2:+19310139	MS.gene027994:intron
GAACAAATGTTAGTCATGGG+GGG	0.666834	5.2:+19310413	MS.gene027994:CDS
GTGCTGCATCAACTTTGTGG+TGG	0.674580	5.2:-19309463	None:intergenic
TGTGCTCGGACATACGGACA+AGG	0.675926	5.2:+19309844	MS.gene027994:CDS
AGATACGCATATAGGAACTG+TGG	0.688543	5.2:-19309700	None:intergenic
GAGTTACCTATTGAAGAGGA+CGG	0.689224	5.2:-19310199	None:intergenic
AGTTGCATTTCGGCCAACAG+AGG	0.691610	5.2:-19310023	None:intergenic
TTTGAATTGAAAGCTCACGA+TGG	0.714125	5.2:+19309881	MS.gene027994:CDS
CTGTTCCCTGGAAACAAGAG+TGG	0.724640	5.2:+19309741	MS.gene027994:CDS
GGTGGAACTGAAACAGATAG+CGG	0.738653	5.2:-19309445	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AACTTTAAATATGAAAAGCT+GGG	+	chr5.2:19309800-19309819	MS.gene027994:intron	20.0%
!!	TAACTTTAAATATGAAAAGC+TGG	+	chr5.2:19309799-19309818	MS.gene027994:intron	20.0%
!	CTGAATTGAAGAAAATAAAG+AGG	+	chr5.2:19310320-19310339	MS.gene027994:CDS	25.0%
	ATAGGAACAAATGTTAGTCA+TGG	+	chr5.2:19310409-19310428	MS.gene027994:CDS	30.0%
	TAGGAACAAATGTTAGTCAT+GGG	+	chr5.2:19310410-19310429	MS.gene027994:CDS	30.0%
	TGATAACTTTCATATCGTCA+TGG	+	chr5.2:19309514-19309533	MS.gene027994:intron	30.0%
	TTTGGCTGGATAAATCAAAA+GGG	-	chr5.2:19309617-19309636	None:intergenic	30.0%
!!	TTTTGGCTGGATAAATCAAA+AGG	-	chr5.2:19309618-19309637	None:intergenic	30.0%
	AAAAATCTATGTGGTTCAGC+GGG	-	chr5.2:19309574-19309593	None:intergenic	35.0%
	AAAAGGGTAAGTCATGAACT+TGG	-	chr5.2:19309601-19309620	None:intergenic	35.0%
	AGGAACAAATGTTAGTCATG+GGG	+	chr5.2:19310411-19310430	MS.gene027994:CDS	35.0%
	ATCACTGCAATCAAACATGA+TGG	+	chr5.2:19310103-19310122	MS.gene027994:intron	35.0%
	ATGAATTGTCACCATTCTGA+AGG	-	chr5.2:19310354-19310373	None:intergenic	35.0%
	CAAAAATCTATGTGGTTCAG+CGG	-	chr5.2:19309575-19309594	None:intergenic	35.0%
	CAGCAACAACAACATTTGTA+TGG	-	chr5.2:19310003-19310022	None:intergenic	35.0%
	CATGTTTGATTGCAGTGATT+TGG	-	chr5.2:19310102-19310121	None:intergenic	35.0%
	GAAGAAAATAAAGAGGATGC+TGG	+	chr5.2:19310327-19310346	MS.gene027994:CDS	35.0%
	GAATTTGCAGCAGTAGTAAA+AGG	-	chr5.2:19310283-19310302	None:intergenic	35.0%
	GATGAGGGAAATACAGTAAT+AGG	+	chr5.2:19310391-19310410	MS.gene027994:CDS	35.0%
	GCAAATTCTCAAGAGGAAAT+CGG	+	chr5.2:19310295-19310314	MS.gene027994:CDS	35.0%
	GCTTTCAATTCAAATAGCTC+CGG	-	chr5.2:19309875-19309894	None:intergenic	35.0%
	TGAATTGTCACCATTCTGAA+GGG	-	chr5.2:19310353-19310372	None:intergenic	35.0%
	TGATTTATCCAGCCAAAACT+AGG	+	chr5.2:19309620-19309639	MS.gene027994:intron	35.0%
	TTTGAATTGAAAGCTCACGA+TGG	+	chr5.2:19309881-19309900	MS.gene027994:CDS	35.0%
!	GCTGAACCACATAGATTTTT+GGG	+	chr5.2:19309574-19309593	MS.gene027994:intron	35.0%
	AAGCCTACTTTGCAACGTAT+CGG	+	chr5.2:19309929-19309948	MS.gene027994:CDS	40.0%
	ACAACAACATTTGTATGGCG+CGG	-	chr5.2:19309998-19310017	None:intergenic	40.0%
	ACTTTCATATCGTCATGGAC+CGG	+	chr5.2:19309519-19309538	MS.gene027994:intron	40.0%
	AGATACGCATATAGGAACTG+TGG	-	chr5.2:19309703-19309722	None:intergenic	40.0%
	CCTCTTCAATAGGTAACTCA+GGG	+	chr5.2:19310203-19310222	MS.gene027994:CDS	40.0%
	CTTGGACCCAAAAATCTATG+TGG	-	chr5.2:19309583-19309602	None:intergenic	40.0%
	GAACAAATGTTAGTCATGGG+GGG	+	chr5.2:19310413-19310432	MS.gene027994:CDS	40.0%
	GAGTTACCTATTGAAGAGGA+CGG	-	chr5.2:19310202-19310221	None:intergenic	40.0%
	GCAGCAGTAGTAAAAGGAAA+TGG	-	chr5.2:19310277-19310296	None:intergenic	40.0%
	GGAACAAATGTTAGTCATGG+GGG	+	chr5.2:19310412-19310431	MS.gene027994:CDS	40.0%
	TACTGCTGCAAATTCTCAAG+AGG	+	chr5.2:19310288-19310307	MS.gene027994:CDS	40.0%
	TCCTCTTCAATAGGTAACTC+AGG	+	chr5.2:19310202-19310221	MS.gene027994:CDS	40.0%
!	CAAGGCATAGGAAGGTTTTT+AGG	+	chr5.2:19309644-19309663	MS.gene027994:CDS	40.0%
!	CGCTGAACCACATAGATTTT+TGG	+	chr5.2:19309573-19309592	MS.gene027994:intron	40.0%
!	TTCATCTTTTGCTGCTGATG+AGG	+	chr5.2:19310369-19310388	MS.gene027994:CDS	40.0%
!!	GGTACTTTTAAGTCGTACGA+TGG	+	chr5.2:19309665-19309684	MS.gene027994:CDS	40.0%
!!!	ACCAGAACCTTGTTTTGCTT+TGG	-	chr5.2:19310149-19310168	None:intergenic	40.0%
	AAAAGAGGGAACGACATCAG+GGG	-	chr5.2:19309549-19309568	None:intergenic	45.0%
	AACATCCTGTATCCACCTGT+TGG	-	chr5.2:19309966-19309985	None:intergenic	45.0%
	AACTAGGTCAAGGCATAGGA+AGG	+	chr5.2:19309636-19309655	MS.gene027994:intron	45.0%
	ACAAAAGAGGGAACGACATC+AGG	-	chr5.2:19309551-19309570	None:intergenic	45.0%
	ACCATCCTGTCATTGAAGCT+TGG	-	chr5.2:19310067-19310086	None:intergenic	45.0%
	ATCCAGCCAAAACTAGGTCA+AGG	+	chr5.2:19309626-19309645	MS.gene027994:intron	45.0%
	CAAAAGAGGGAACGACATCA+GGG	-	chr5.2:19309550-19309569	None:intergenic	45.0%
	CAATTGATGTGACTGTTCCC+TGG	+	chr5.2:19309729-19309748	MS.gene027994:CDS	45.0%
	CACCTTCAGCAGTTGCATTT+CGG	-	chr5.2:19310036-19310055	None:intergenic	45.0%
	CCAAAACTAGGTCAAGGCAT+AGG	+	chr5.2:19309632-19309651	MS.gene027994:intron	45.0%
	CCCTGAGTTACCTATTGAAG+AGG	-	chr5.2:19310206-19310225	None:intergenic	45.0%
	CTCTTACCGTCCTCTTCAAT+AGG	+	chr5.2:19310193-19310212	MS.gene027994:CDS	45.0%
	GCCAAAGCAAAACAAGGTTC+TGG	+	chr5.2:19310145-19310164	MS.gene027994:CDS	45.0%
	GGTAAGAGATGTACCATGCT+TGG	-	chr5.2:19310181-19310200	None:intergenic	45.0%
	GGTCTAATCTGCTTCCTACT+TGG	+	chr5.2:19310224-19310243	MS.gene027994:CDS	45.0%
	GGTGGAACTGAAACAGATAG+CGG	-	chr5.2:19309448-19309467	None:intergenic	45.0%
	TAGGCTGCCAAAGCAAAACA+AGG	+	chr5.2:19310139-19310158	MS.gene027994:intron	45.0%
	TCCAAGCTTCAATGACAGGA+TGG	+	chr5.2:19310063-19310082	MS.gene027994:CDS	45.0%
	TGAGATAAGCACCCCAGTTA+CGG	-	chr5.2:19309910-19309929	None:intergenic	45.0%
	TGCGACACAGATACGCATAT+AGG	-	chr5.2:19309711-19309730	None:intergenic	45.0%
	TGGTGTGTTCGTGCTAACAA+TGG	+	chr5.2:19309761-19309780	MS.gene027994:intron	45.0%
	TGGTTCCAAGCTTCAATGAC+AGG	+	chr5.2:19310059-19310078	MS.gene027994:CDS	45.0%
	TTTGCTGCTGATGAGGATGA+GGG	+	chr5.2:19310376-19310395	MS.gene027994:CDS	45.0%
!	AACACACCACTCTTGTTTCC+AGG	-	chr5.2:19309750-19309769	None:intergenic	45.0%
!	ACACACCACTCTTGTTTCCA+GGG	-	chr5.2:19309749-19309768	None:intergenic	45.0%
!	CCTATGCCTTGACCTAGTTT+TGG	-	chr5.2:19309635-19309654	None:intergenic	45.0%
!	GTACCGATACGTTGCAAAGT+AGG	-	chr5.2:19309935-19309954	None:intergenic	45.0%
!	TGATGGTCTTGCTGCTCAAT+AGG	+	chr5.2:19310120-19310139	MS.gene027994:intron	45.0%
!	TTTTGCTGCTGATGAGGATG+AGG	+	chr5.2:19310375-19310394	MS.gene027994:CDS	45.0%
!!!	AGCTGGGTGTTTTTTGTCAC+AGG	+	chr5.2:19309816-19309835	MS.gene027994:intron	45.0%
!!!	GGTGTTTTTTGTCACAGGTG+TGG	+	chr5.2:19309821-19309840	MS.gene027994:intron	45.0%
	ACATACGGACAAGGTGTGTC+CGG	+	chr5.2:19309853-19309872	MS.gene027994:CDS	50.0%
	AGTTGCATTTCGGCCAACAG+AGG	-	chr5.2:19310026-19310045	None:intergenic	50.0%
	CACGTGCTGCATCAACTTTG+TGG	-	chr5.2:19309469-19309488	None:intergenic	50.0%
	CTGTTCCCTGGAAACAAGAG+TGG	+	chr5.2:19309741-19309760	MS.gene027994:CDS	50.0%
	GAACGACATCAGGGGAAATC+CGG	-	chr5.2:19309541-19309560	None:intergenic	50.0%
	GTGCTGCATCAACTTTGTGG+TGG	-	chr5.2:19309466-19309485	None:intergenic	50.0%
	GTGTTCACGATGAAGGTCTG+TGG	+	chr5.2:19309486-19309505	MS.gene027994:intron	50.0%
	TCACGATGGTGTCCGTAACT+GGG	+	chr5.2:19309895-19309914	MS.gene027994:CDS	50.0%
	TGCAACCAACAGGTGGATAC+AGG	+	chr5.2:19309958-19309977	MS.gene027994:CDS	50.0%
	TGGTTCAGCGGGACAAAAGA+GGG	-	chr5.2:19309563-19309582	None:intergenic	50.0%
!	GTTGTTGTTGCTGCCTCTGT+TGG	+	chr5.2:19310010-19310029	MS.gene027994:CDS	50.0%
!	TGCAACTGCTGAAGGTGTAC+TGG	+	chr5.2:19310039-19310058	MS.gene027994:CDS	50.0%
!!!	TGCCTTGACCTAGTTTTGGC+TGG	-	chr5.2:19309631-19309650	None:intergenic	50.0%
	AGGATGCTGGCCCTTCAGAA+TGG	+	chr5.2:19310340-19310359	MS.gene027994:CDS	55.0%
	CACGATGGTGTCCGTAACTG+GGG	+	chr5.2:19309896-19309915	MS.gene027994:CDS	55.0%
	CTCACGATGGTGTCCGTAAC+TGG	+	chr5.2:19309894-19309913	MS.gene027994:CDS	55.0%
	GCAGCACGTGTTCACGATGA+AGG	+	chr5.2:19309479-19309498	MS.gene027994:CDS	55.0%
	GGCCGAAATGCAACTGCTGA+AGG	+	chr5.2:19310031-19310050	MS.gene027994:CDS	55.0%
	GTACTGCTGCAACCAACAGG+TGG	+	chr5.2:19309951-19309970	MS.gene027994:CDS	55.0%
	GTGGTTCAGCGGGACAAAAG+AGG	-	chr5.2:19309564-19309583	None:intergenic	55.0%
	GTGTGGTGTGCTCGGACATA+CGG	+	chr5.2:19309838-19309857	MS.gene027994:CDS	55.0%
	TCGGTACTGCTGCAACCAAC+AGG	+	chr5.2:19309948-19309967	MS.gene027994:CDS	55.0%
	TCTGCTTCCTACTTGGCCTC+TGG	+	chr5.2:19310231-19310250	MS.gene027994:CDS	55.0%
	TGGTGCGAACTCTCCAAGCA+TGG	+	chr5.2:19310165-19310184	MS.gene027994:CDS	55.0%
	TGTCACAGGTGTGGTGTGCT+CGG	+	chr5.2:19309830-19309849	MS.gene027994:intron	55.0%
	TGTGCTCGGACATACGGACA+AGG	+	chr5.2:19309844-19309863	MS.gene027994:CDS	55.0%
	CCAAGCACCAGAGGCCAAGT+AGG	-	chr5.2:19310241-19310260	None:intergenic	60.0%
	CCTACTTGGCCTCTGGTGCT+TGG	+	chr5.2:19310238-19310257	MS.gene027994:CDS	60.0%
	CTGGTGCTTGGACTGTCTGC+AGG	+	chr5.2:19310250-19310269	MS.gene027994:CDS	60.0%
	GCAGACAGTCCAAGCACCAG+AGG	-	chr5.2:19310250-19310269	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.2	gene	19309437	19310447	19309437	ID=MS.gene027994
chr5.2	mRNA	19309437	19310447	19309437	ID=MS.gene027994.t1;Parent=MS.gene027994
chr5.2	exon	19309437	19309500	19309437	ID=MS.gene027994.t1.exon1;Parent=MS.gene027994.t1
chr5.2	CDS	19309437	19309500	19309437	ID=cds.MS.gene027994.t1;Parent=MS.gene027994.t1
chr5.2	exon	19309642	19309762	19309642	ID=MS.gene027994.t1.exon2;Parent=MS.gene027994.t1
chr5.2	CDS	19309642	19309762	19309642	ID=cds.MS.gene027994.t1;Parent=MS.gene027994.t1
chr5.2	exon	19309838	19310084	19309838	ID=MS.gene027994.t1.exon3;Parent=MS.gene027994.t1
chr5.2	CDS	19309838	19310084	19309838	ID=cds.MS.gene027994.t1;Parent=MS.gene027994.t1
chr5.2	exon	19310142	19310447	19310142	ID=MS.gene027994.t1.exon4;Parent=MS.gene027994.t1
chr5.2	CDS	19310142	19310447	19310142	ID=cds.MS.gene027994.t1;Parent=MS.gene027994.t1

Gene Sequence

>MS.gene027994

ATGGTTAACCGCTATCTGTTTCAGTTCCACCACAAAGTTGATGCAGCACGTGTTCACGATGAAGGTCTGTGGCTTTATGATAACTTTCATATCGTCATGGACCGGATTTCCCCTGATGTCGTTCCCTCTTTTGTCCCGCTGAACCACATAGATTTTTGGGTCCAAGTTCATGACTTACCCTTTTGATTTATCCAGCCAAAACTAGGTCAAGGCATAGGAAGGTTTTTAGGTACTTTTAAGTCGTACGATGGTCGTAATTCAATCCACAGTTCCTATATGCGTATCTGTGTCGCAATTGATGTGACTGTTCCCTGGAAACAAGAGTGGTGTGTTCGTGCTAACAATGGTACTTTTGTTACTGTTAACTTTAAATATGAAAAGCTGGGTGTTTTTTGTCACAGGTGTGGTGTGCTCGGACATACGGACAAGGTGTGTCCGGAGCTATTTGAATTGAAAGCTCACGATGGTGTCCGTAACTGGGGTGCTTATCTCAAGCCTACTTTGCAACGTATCGGTACTGCTGCAACCAACAGGTGGATACAGGATGTTGTTGCTGTGCCGCGCCATACAAATGTTGTTGTTGCTGCCTCTGTTGGCCGAAATGCAACTGCTGAAGGTGTACTGGTTCCAAGCTTCAATGACAGGATGGTAGCTGTACAAAACCAAATCACTGCAATCAAACATGATGGTCTTGCTGCTCAATAGGCTGCCAAAGCAAAACAAGGTTCTGGTGCGAACTCTCCAAGCATGGTACATCTCTTACCGTCCTCTTCAATAGGTAACTCAGGGTCTAATCTGCTTCCTACTTGGCCTCTGGTGCTTGGACTGTCTGCAGGTCCATTTCCTTTTACTACTGCTGCAAATTCTCAAGAGGAAATCGGCTCTGAATTGAAGAAAATAAAGAGGATGCTGGCCCTTCAGAATGGTGACAATTCATCTTTTGCTGCTGATGAGGATGAGGGAAATACAGTAATAGGAACAAATGTTAGTCATGGGGGGATGATGATATGA

Protein sequence

>MS.gene027994.t1

MVNRYLFQFHHKVDAARVHDEGQGIGRFLGTFKSYDGRNSIHSSYMRICVAIDVTVPWKQEWCGVLGHTDKVCPELFELKAHDGVRNWGAYLKPTLQRIGTAATNRWIQDVVAVPRHTNVVVAASVGRNATAEGVLVPSFNDRMAAKAKQGSGANSPSMVHLLPSSSIGNSGSNLLPTWPLVLGLSAGPFPFTTAANSQEEIGSELKKIKRMLALQNGDNSSFAADEDEGNTVIGTNVSHGGMMI