AlfalfaGEDB | MS.gene84790

M. sativa cultivar XinJiangDaYe / MS.gene84790

KEGG: -
GO: GO:0003674 GO:0003676 GO:0005488 GO:0008270 GO:0043167 GO:0043169 GO:0046872 GO:0046914 GO:0097159 GO:1901363
PFAM: PF14111.9 PF14392.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene84790.t1	AES70414.1	57.1	347	80	5	1	345	1	280	1.40E-95	360.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene84790.t1	O04244	27.2	136	95	2	83	216	6	139	1.2e-10	69.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene84790.t1	G7J017	57.1	347	80	5	1	345	1	280	1.0e-95	360.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene66650	MS.gene84790	PPI
MS.gene86868	MS.gene84790	PPI
MS.gene060386	MS.gene84790	PPI
MS.gene24070	MS.gene84790	PPI
MS.gene71588	MS.gene84790	PPI
MS.gene04749	MS.gene84790	PPI
MS.gene84790	MS.gene59460	PPI
MS.gene027169	MS.gene84790	PPI
MS.gene81194	MS.gene84790	PPI
MS.gene022929	MS.gene84790	PPI
MS.gene42903	MS.gene84790	PPI
MS.gene81712	MS.gene84790	PPI
MS.gene026680	MS.gene84790	PPI
MS.gene021555	MS.gene84790	PPI
MS.gene048747	MS.gene84790	PPI
MS.gene69584	MS.gene84790	PPI
MS.gene22200	MS.gene84790	PPI
MS.gene019165	MS.gene84790	PPI
MS.gene055546	MS.gene84790	PPI
MS.gene49057	MS.gene84790	PPI
MS.gene84790	MS.gene44144	PPI
MS.gene073573	MS.gene84790	PPI
MS.gene031967	MS.gene84790	PPI
MS.gene053373	MS.gene84790	PPI
MS.gene02896	MS.gene84790	PPI
MS.gene063214	MS.gene84790	PPI
MS.gene97410	MS.gene84790	PPI
MS.gene83772	MS.gene84790	PPI
MS.gene32415	MS.gene84790	PPI
MS.gene009213	MS.gene84790	PPI
MS.gene060788	MS.gene84790	PPI
MS.gene035626	MS.gene84790	PPI
MS.gene63762	MS.gene84790	PPI
MS.gene65623	MS.gene84790	PPI
MS.gene27329	MS.gene84790	PPI
MS.gene71675	MS.gene84790	PPI
MS.gene30208	MS.gene84790	PPI
MS.gene028716	MS.gene84790	PPI
MS.gene21066	MS.gene84790	PPI
MS.gene84790	MS.gene21066	PPI
MS.gene69495	MS.gene84790	PPI
MS.gene55209	MS.gene84790	PPI
MS.gene032311	MS.gene84790	PPI
MS.gene64178	MS.gene84790	PPI
MS.gene030090	MS.gene84790	PPI
MS.gene96174	MS.gene84790	PPI
MS.gene018196	MS.gene84790	PPI
MS.gene86849	MS.gene84790	PPI
MS.gene57019	MS.gene84790	PPI
MS.gene84790	MS.gene018474	PPI
MS.gene84790	MS.gene86868	PPI
MS.gene03936	MS.gene84790	PPI
MS.gene021968	MS.gene84790	PPI
MS.gene60059	MS.gene84790	PPI
MS.gene44144	MS.gene84790	PPI
MS.gene43393	MS.gene84790	PPI
MS.gene34197	MS.gene84790	PPI
MS.gene008275	MS.gene84790	PPI
MS.gene34618	MS.gene84790	PPI
MS.gene59460	MS.gene84790	PPI
MS.gene038757	MS.gene84790	PPI
MS.gene005120	MS.gene84790	PPI
MS.gene016632	MS.gene84790	PPI
MS.gene048072	MS.gene84790	PPI
MS.gene025987	MS.gene84790	PPI
MS.gene84790	MS.gene61499	PPI
MS.gene05436	MS.gene84790	PPI
MS.gene000640	MS.gene84790	PPI
MS.gene059736	MS.gene84790	PPI
MS.gene70932	MS.gene84790	PPI
MS.gene047954	MS.gene84790	PPI
MS.gene35175	MS.gene84790	PPI
MS.gene62249	MS.gene84790	PPI
MS.gene025675	MS.gene84790	PPI
MS.gene069786	MS.gene84790	PPI
MS.gene054652	MS.gene84790	PPI
MS.gene021965	MS.gene84790	PPI
MS.gene055683	MS.gene84790	PPI
MS.gene042614	MS.gene84790	PPI
MS.gene41643	MS.gene84790	PPI
MS.gene013890	MS.gene84790	PPI
MS.gene26844	MS.gene84790	PPI
MS.gene060773	MS.gene84790	PPI
MS.gene021647	MS.gene84790	PPI
MS.gene66651	MS.gene84790	PPI
MS.gene96109	MS.gene84790	PPI
MS.gene35202	MS.gene84790	PPI
MS.gene048706	MS.gene84790	PPI
MS.gene051449	MS.gene84790	PPI
MS.gene015093	MS.gene84790	PPI
MS.gene007022	MS.gene84790	PPI
MS.gene009121	MS.gene84790	PPI
MS.gene024841	MS.gene84790	PPI
MS.gene51804	MS.gene84790	PPI
MS.gene87845	MS.gene84790	PPI
MS.gene36069	MS.gene84790	PPI
MS.gene038394	MS.gene84790	PPI
MS.gene84790	MS.gene022929	PPI
MS.gene84790	MS.gene007022	PPI
MS.gene30136	MS.gene84790	PPI
MS.gene95960	MS.gene84790	PPI
MS.gene61452	MS.gene84790	PPI
MS.gene008927	MS.gene84790	PPI
MS.gene016102	MS.gene84790	PPI
MS.gene46941	MS.gene84790	PPI
MS.gene045614	MS.gene84790	PPI
MS.gene96541	MS.gene84790	PPI
MS.gene049561	MS.gene84790	PPI
MS.gene000634	MS.gene84790	PPI
MS.gene009781	MS.gene84790	PPI
MS.gene84790	MS.gene048342	PPI
MS.gene46948	MS.gene84790	PPI
MS.gene025873	MS.gene84790	PPI
MS.gene012019	MS.gene84790	PPI
MS.gene06164	MS.gene84790	PPI
MS.gene013676	MS.gene84790	PPI
MS.gene025401	MS.gene84790	PPI
MS.gene05358	MS.gene84790	PPI
MS.gene84790	MS.gene88393	PPI
MS.gene95561	MS.gene84790	PPI
MS.gene074257	MS.gene84790	PPI
MS.gene065627	MS.gene84790	PPI
MS.gene84790	MS.gene008658	PPI
MS.gene010890	MS.gene84790	PPI
MS.gene018745	MS.gene84790	PPI
MS.gene000629	MS.gene84790	PPI
MS.gene65546	MS.gene84790	PPI
MS.gene09023	MS.gene84790	PPI
MS.gene059269	MS.gene84790	PPI
MS.gene000506	MS.gene84790	PPI
MS.gene74639	MS.gene84790	PPI
MS.gene032299	MS.gene84790	PPI
MS.gene05319	MS.gene84790	PPI
MS.gene88393	MS.gene84790	PPI
MS.gene038098	MS.gene84790	PPI
MS.gene56991	MS.gene84790	PPI
MS.gene94654	MS.gene84790	PPI
MS.gene85538	MS.gene84790	PPI
MS.gene062511	MS.gene84790	PPI
MS.gene22111	MS.gene84790	PPI
MS.gene28545	MS.gene84790	PPI
MS.gene28718	MS.gene84790	PPI
MS.gene055560	MS.gene84790	PPI
MS.gene84790	MS.gene08606	PPI
MS.gene29321	MS.gene84790	PPI
MS.gene84790	MS.gene000640	PPI
MS.gene064966	MS.gene84790	PPI
MS.gene069624	MS.gene84790	PPI
MS.gene008658	MS.gene84790	PPI
MS.gene002590	MS.gene84790	PPI
MS.gene003264	MS.gene84790	PPI
MS.gene84790	MS.gene74639	PPI
MS.gene84790	MS.gene071133	PPI
MS.gene98616	MS.gene84790	PPI
MS.gene40828	MS.gene84790	PPI
MS.gene43924	MS.gene84790	PPI
MS.gene046089	MS.gene84790	PPI
MS.gene77990	MS.gene84790	PPI
MS.gene036423	MS.gene84790	PPI
MS.gene84790	MS.gene37955	PPI
MS.gene013644	MS.gene84790	PPI
MS.gene80362	MS.gene84790	PPI
MS.gene72520	MS.gene84790	PPI
MS.gene61651	MS.gene84790	PPI
MS.gene013193	MS.gene84790	PPI
MS.gene24278	MS.gene84790	PPI
MS.gene025158	MS.gene84790	PPI
MS.gene027994	MS.gene84790	PPI
MS.gene61499	MS.gene84790	PPI
MS.gene068629	MS.gene84790	PPI
MS.gene019001	MS.gene84790	PPI
MS.gene63743	MS.gene84790	PPI
MS.gene63150	MS.gene84790	PPI
MS.gene48477	MS.gene84790	PPI
MS.gene045875	MS.gene84790	PPI
MS.gene84790	MS.gene027994	PPI
MS.gene54051	MS.gene84790	PPI
MS.gene03149	MS.gene84790	PPI
MS.gene008861	MS.gene84790	PPI
MS.gene024405	MS.gene84790	PPI
MS.gene73261	MS.gene84790	PPI
MS.gene012748	MS.gene84790	PPI
MS.gene024297	MS.gene84790	PPI
MS.gene83979	MS.gene84790	PPI
MS.gene45083	MS.gene84790	PPI
MS.gene92517	MS.gene84790	PPI
MS.gene85295	MS.gene84790	PPI
MS.gene057934	MS.gene84790	PPI
MS.gene60390	MS.gene84790	PPI
MS.gene47792	MS.gene84790	PPI
MS.gene98471	MS.gene84790	PPI
MS.gene84790	MS.gene61651	PPI
MS.gene028714	MS.gene84790	PPI
MS.gene049610	MS.gene84790	PPI
MS.gene038676	MS.gene84790	PPI
MS.gene060718	MS.gene84790	PPI
MS.gene042651	MS.gene84790	PPI
MS.gene93396	MS.gene84790	PPI
MS.gene05576	MS.gene84790	PPI
MS.gene84790	MS.gene025987	PPI
MS.gene52349	MS.gene84790	PPI
MS.gene05231	MS.gene84790	PPI
MS.gene84790	MS.gene043140	PPI
MS.gene98467	MS.gene84790	PPI
MS.gene46353	MS.gene84790	PPI
MS.gene010656	MS.gene84790	PPI
MS.gene42010	MS.gene84790	PPI
MS.gene037049	MS.gene84790	PPI
MS.gene034643	MS.gene84790	PPI
MS.gene40469	MS.gene84790	PPI
MS.gene041264	MS.gene84790	PPI
MS.gene41979	MS.gene84790	PPI
MS.gene037634	MS.gene84790	PPI
MS.gene024522	MS.gene84790	PPI
MS.gene000379	MS.gene84790	PPI
MS.gene048342	MS.gene84790	PPI
MS.gene64130	MS.gene84790	PPI
MS.gene050679	MS.gene84790	PPI
MS.gene60266	MS.gene84790	PPI
MS.gene84790	MS.gene015093	PPI
MS.gene20246	MS.gene84790	PPI
MS.gene055223	MS.gene84790	PPI
MS.gene84790	MS.gene24278	PPI
MS.gene84790	MS.gene000379	PPI
MS.gene016719	MS.gene84790	PPI
MS.gene010290	MS.gene84790	PPI
MS.gene071784	MS.gene84790	PPI
MS.gene053747	MS.gene84790	PPI
MS.gene061579	MS.gene84790	PPI
MS.gene039692	MS.gene84790	PPI
MS.gene76420	MS.gene84790	PPI
MS.gene071320	MS.gene84790	PPI
MS.gene65471	MS.gene84790	PPI
MS.gene061850	MS.gene84790	PPI
MS.gene84790	MS.gene09517	PPI
MS.gene26433	MS.gene84790	PPI
MS.gene34463	MS.gene84790	PPI
MS.gene048088	MS.gene84790	PPI
MS.gene018474	MS.gene84790	PPI
MS.gene22730	MS.gene84790	PPI
MS.gene073582	MS.gene84790	PPI
MS.gene042559	MS.gene84790	PPI
MS.gene84790	MS.gene62249	PPI
MS.gene058889	MS.gene84790	PPI
MS.gene071133	MS.gene84790	PPI
MS.gene53904	MS.gene84790	PPI
MS.gene26038	MS.gene84790	PPI
MS.gene08606	MS.gene84790	PPI
MS.gene08708	MS.gene84790	PPI
MS.gene09517	MS.gene84790	PPI
MS.gene69586	MS.gene84790	PPI
MS.gene042027	MS.gene84790	PPI
MS.gene85308	MS.gene84790	PPI
MS.gene69490	MS.gene84790	PPI
MS.gene043140	MS.gene84790	PPI
MS.gene015248	MS.gene84790	PPI
MS.gene012889	MS.gene84790	PPI
MS.gene34812	MS.gene84790	PPI
MS.gene44083	MS.gene84790	PPI
MS.gene37537	MS.gene84790	PPI
MS.gene84790	MS.gene60390	PPI
MS.gene55682	MS.gene84790	PPI
MS.gene04970	MS.gene84790	PPI
MS.gene08106	MS.gene84790	PPI
MS.gene51799	MS.gene84790	PPI
MS.gene58419	MS.gene84790	PPI
MS.gene067340	MS.gene84790	PPI
MS.gene96163	MS.gene84790	PPI
MS.gene08713	MS.gene84790	PPI
MS.gene65474	MS.gene84790	PPI
MS.gene23521	MS.gene84790	PPI
MS.gene019177	MS.gene84790	PPI
MS.gene049512	MS.gene84790	PPI
MS.gene29406	MS.gene84790	PPI
MS.gene038623	MS.gene84790	PPI
MS.gene86275	MS.gene84790	PPI
MS.gene98127	MS.gene84790	PPI
MS.gene05357	MS.gene84790	PPI
MS.gene87529	MS.gene84790	PPI
MS.gene004417	MS.gene84790	PPI
MS.gene04134	MS.gene84790	PPI
MS.gene062067	MS.gene84790	PPI
MS.gene84790	MS.gene025158	PPI
MS.gene50392	MS.gene84790	PPI
MS.gene37955	MS.gene84790	PPI
MS.gene072852	MS.gene84790	PPI
MS.gene57044	MS.gene84790	PPI
MS.gene054508	MS.gene84790	PPI
MS.gene89815	MS.gene84790	PPI
MS.gene41393	MS.gene84790	PPI
MS.gene39956	MS.gene84790	PPI
MS.gene017586	MS.gene84790	PPI
MS.gene98756	MS.gene84790	PPI
MS.gene71637	MS.gene84790	PPI
MS.gene09589	MS.gene84790	PPI
MS.gene057828	MS.gene84790	PPI
MS.gene84790	MS.gene03149	PPI
MS.gene044729	MS.gene84790	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene84790.t1	MTR_3g053920	56.484	347	82	5	1	345	1	280	5.48e-119	348
MS.gene84790.t1	MTR_2g061500	82.946	129	22	0	1	129	1	129	6.10e-75	231
MS.gene84790.t1	MTR_4g103530	84.946	93	14	0	55	147	1	93	1.96e-52	174
MS.gene84790.t1	MTR_4g103530	57.812	64	26	1	251	313	119	182	1.42e-13	69.7
MS.gene84790.t1	MTR_7g011710	68.182	88	28	0	55	142	1	88	2.71e-36	131
MS.gene84790.t1	MTR_6g033215	33.333	171	112	1	31	199	124	294	3.32e-31	121
MS.gene84790.t1	MTR_0010s0370	36.364	176	104	4	8	177	4	177	1.58e-30	116
MS.gene84790.t1	MTR_0010s0350	36.364	176	104	4	8	177	4	177	1.58e-30	116
MS.gene84790.t1	MTR_8g463110	57.391	115	46	2	288	401	1	113	6.37e-20	92.8
MS.gene84790.t1	MTR_1g036720	33.945	109	70	1	7	113	3	111	2.23e-14	69.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene84790.t1	AT2G17920	26.267	217	146	6	8	216	9	219	3.57e-18	85.1
MS.gene84790.t1	AT3G57587	28.873	142	97	2	77	216	80	219	2.51e-16	80.5
MS.gene84790.t1	AT2G41590	29.114	158	102	3	67	216	64	219	3.24e-16	80.1
MS.gene84790.t1	AT5G36228	29.091	165	109	4	69	227	71	233	3.86e-16	80.1
MS.gene84790.t1	AT2G13450	27.551	196	132	5	27	215	26	218	1.46e-15	78.6
MS.gene84790.t1	AT3G47920	28.873	142	97	2	77	216	9	148	1.15e-14	74.7
MS.gene84790.t1	AT3G31430	28.646	192	125	7	30	215	126	311	2.03e-14	74.3
MS.gene84790.t1	AT2G02103	27.848	158	104	3	67	216	64	219	3.02e-14	74.7
MS.gene84790.t1	AT5G25200	27.465	142	99	2	77	216	80	219	3.36e-14	74.3
MS.gene84790.t1	AT5G18636	27.465	142	99	2	77	216	80	219	3.68e-14	73.9
MS.gene84790.t1	AT4G02000	27.206	136	95	2	83	216	6	139	1.34e-12	68.9

Find 120 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTTGCTGCTGATGGGGATA+TGG	0.215580	6.3:+49197803	MS.gene84790:CDS
CAAGGTCTAGGAAGCTTTCT+AGG	0.220477	6.3:+49197063	MS.gene84790:CDS
TGTCACTGTCCCTTTGAAAA+AGG	0.255154	6.3:+49197155	MS.gene84790:CDS
CTGATGATGGTGTTCGGAAC+TGG	0.260825	6.3:+49197313	MS.gene84790:CDS
CACCATCAGCAGGATTGTTT+TGG	0.282463	6.3:-49197422	None:intergenic
AACCCGTTTGACTGGCTTCC+AGG	0.282685	6.3:-49196818	None:intergenic
CGACATACGTTCACTGAAAT+AGG	0.296935	6.3:-49196791	None:intergenic
CGTCAGATCATTATCCTATA+TGG	0.298679	6.3:+49198611	MS.gene84790:CDS
ATCTGGTCAAATGCATTTCC+TGG	0.324399	6.3:+49197602	MS.gene84790:CDS
TGGTGCGGCACAGCAGGAAT+AGG	0.330458	6.3:-49197402	None:intergenic
TCCTAGACCTTGACCTACTT+TGG	0.331729	6.3:-49197052	None:intergenic
CCTAGACCTTGACCTACTTT+GGG	0.343147	6.3:-49197051	None:intergenic
CAAGTACATGGGCTGCCTTT+TGG	0.351190	6.3:+49197018	MS.gene84790:CDS
TTATTCTATCCATGGCAATA+TGG	0.357288	6.3:-49196942	None:intergenic
CTTGTTTCAGTTCCATCATA+AGG	0.363309	6.3:+49196870	MS.gene84790:CDS
GCAGCCAACAGGTGTGAAAT+TGG	0.376585	6.3:-49197697	None:intergenic
TCGAGGATGGCAGTAGGTTC+AGG	0.379928	6.3:-49196721	None:intergenic
CCCTCAAACCTCAACCTTGA+TGG	0.382465	6.3:+49196652	MS.gene84790:CDS
TAATGAAATGGCCGAGGCTT+AGG	0.389758	6.3:-49198646	None:intergenic
GTACCAACACGTTGAGCAAC+AGG	0.396906	6.3:-49197351	None:intergenic
TTCCTGGCTTCTTCTTCCAC+AGG	0.401249	6.3:+49197618	MS.gene84790:CDS
CCTCCACGCCCTGTGGTGCT+TGG	0.403147	6.3:+49197663	MS.gene84790:CDS
CCCTGTGGTGCTTGGTCTAC+CGG	0.404074	6.3:+49197671	MS.gene84790:CDS
TTTGCTGCTGATGGGGATAT+GGG	0.404206	6.3:+49197804	MS.gene84790:CDS
GGTGCGGCACAGCAGGAATA+GGG	0.414225	6.3:-49197401	None:intergenic
GATATGGGGAATGATGTAAT+AGG	0.417898	6.3:+49197819	MS.gene84790:CDS
ATCCTCGAAAACTGCTTGAT+TGG	0.418674	6.3:+49196736	MS.gene84790:CDS
GCTACTCCATTTGCTGCTGA+TGG	0.423600	6.3:+49197795	MS.gene84790:CDS
GGTATGAGTGCTGGTCTATC+TGG	0.423909	6.3:+49197585	MS.gene84790:CDS
CTACTCCATTTGCTGCTGAT+GGG	0.426270	6.3:+49197796	MS.gene84790:CDS
CCATCAAGGTTGAGGTTTGA+GGG	0.429032	6.3:-49196652	None:intergenic
GTTCACTGAAATAGGCAAAC+TGG	0.436795	6.3:-49196783	None:intergenic
GCCGGTAGACCAAGCACCAC+AGG	0.441984	6.3:-49197672	None:intergenic
TGATGATGGTGTTCGGAACT+GGG	0.442625	6.3:+49197314	MS.gene84790:CDS
GCCATCAAGGTTGAGGTTTG+AGG	0.448490	6.3:-49196653	None:intergenic
GTGTCCGGAGCTATATGAAC+TGG	0.448875	6.3:+49197287	MS.gene84790:CDS
GTGATCGTAACCCGTTTGAC+TGG	0.449354	6.3:-49196826	None:intergenic
CAGGTGCGGTTTCGAGGTTG+AGG	0.459074	6.3:-49196702	None:intergenic
TGTGATTCGTCGCAGCCAAC+AGG	0.459104	6.3:-49197708	None:intergenic
TAGGTTCAGGTGCGGTTTCG+AGG	0.459485	6.3:-49196708	None:intergenic
GGAGAGCATTGCAACCATAT+AGG	0.464456	6.3:-49198625	None:intergenic
GCAACTCCAGCAGTCGCGTT+AGG	0.469031	6.3:-49197456	None:intergenic
TTCTTCTTCCACAGGGAACT+CGG	0.469783	6.3:+49197626	MS.gene84790:CDS
AAATGTTGAGCATAATGAAA+TGG	0.471113	6.3:-49198658	None:intergenic
GTGAACGTATGTCGCGTGCC+TGG	0.474223	6.3:+49196800	MS.gene84790:CDS
TGTCACAGGTGTGGACTGAT+TGG	0.475493	6.3:+49197249	MS.gene84790:CDS
ACAAAGCTAGGCACGACACC+AGG	0.476615	6.3:-49196967	None:intergenic
TCCCTGTGGAAGAAGAAGCC+AGG	0.487101	6.3:-49197620	None:intergenic
GGCTTGACTTTGTCTGAAGA+GGG	0.489013	6.3:+49196673	MS.gene84790:CDS
TGCCTGGAAGCCAGTCAAAC+GGG	0.491071	6.3:+49196816	MS.gene84790:CDS
CAAAGGGACAGTGACATCAA+TGG	0.496314	6.3:-49197148	None:intergenic
GCTGCTCCTAACGCGACTGC+TGG	0.496945	6.3:+49197450	MS.gene84790:CDS
AGACCAAGCACCACAGGGCG+TGG	0.499412	6.3:-49197666	None:intergenic
GTTGAGGTTTGAGGGATCCA+TGG	0.500518	6.3:-49196644	None:intergenic
TTGGGTTGAATGAAACCAAA+AGG	0.500604	6.3:-49197033	None:intergenic
TGGCTTGACTTTGTCTGAAG+AGG	0.501031	6.3:+49196672	MS.gene84790:CDS
TCACATGATGACTCTGATGC+TGG	0.502596	6.3:+49197726	MS.gene84790:CDS
ATATCCCCATCAGCAGCAAA+TGG	0.503201	6.3:-49197801	None:intergenic
GTGCCTGGAAGCCAGTCAAA+CGG	0.507895	6.3:+49196815	MS.gene84790:CDS
CAGACAAAGTCAAGCCATCA+AGG	0.513055	6.3:-49196666	None:intergenic
GGTTTCATTCAACCCAAAGT+AGG	0.516836	6.3:+49197039	MS.gene84790:CDS
GCAGCAAAGCCACCATCAGC+AGG	0.519762	6.3:-49197432	None:intergenic
TGATTCAGAGGCACAAAGCT+AGG	0.520009	6.3:-49196979	None:intergenic
GCAACACGTGTCCTTGATGA+AGG	0.520257	6.3:+49196898	MS.gene84790:CDS
TCATACAGATAAGGTGTGTC+CGG	0.520652	6.3:+49197272	MS.gene84790:CDS
TGGACTCTGATGATGGTGTT+CGG	0.521790	6.3:+49197307	MS.gene84790:CDS
AAGTCAAGCCATCAAGGTTG+AGG	0.523037	6.3:-49196660	None:intergenic
GTGTTGCATCCACCTTATGA+TGG	0.531201	6.3:-49196882	None:intergenic
AGGTGCGGTTTCGAGGTTGA+GGG	0.531473	6.3:-49196701	None:intergenic
TGATGACTCTGATGCTGGAT+CGG	0.533215	6.3:+49197731	MS.gene84790:CDS
TACTCCATTTGCTGCTGATG+GGG	0.534392	6.3:+49197797	MS.gene84790:CDS
GCAAAACAAGGTATGAGTGC+TGG	0.538920	6.3:+49197576	MS.gene84790:CDS
GCTGCCAATTTCACACCTGT+TGG	0.540212	6.3:+49197693	MS.gene84790:CDS
CAAAAGAACCATTACTAGCT+CGG	0.541532	6.3:-49197188	None:intergenic
ACCAGGGTTTATTCTATCCA+TGG	0.543674	6.3:-49196950	None:intergenic
TGATTGCGGTAAGTTGACTT+TGG	0.543870	6.3:-49197518	None:intergenic
TCCTGGCTTCTTCTTCCACA+GGG	0.551402	6.3:+49197619	MS.gene84790:CDS
ATGGAGTAGCACCATTCTGA+AGG	0.554857	6.3:-49197782	None:intergenic
GAAGAAGAGGAAAAGAATGA+AGG	0.555634	6.3:+49197758	MS.gene84790:CDS
AAACCTGTTGCTCAACGTGT+TGG	0.557217	6.3:+49197348	MS.gene84790:CDS
GAGTCCAGTTCATATAGCTC+CGG	0.559683	6.3:-49197291	None:intergenic
TTGAGGTTTGAGGGATCCAT+GGG	0.564403	6.3:-49196643	None:intergenic
CCCAAAGTAGGTCAAGGTCT+AGG	0.565295	6.3:+49197051	MS.gene84790:CDS
CACCAAAACAATCCTGCTGA+TGG	0.567709	6.3:+49197420	MS.gene84790:CDS
TATGAACTGGACTCTGATGA+TGG	0.569418	6.3:+49197300	MS.gene84790:CDS
ATAACCATGGGCCTTCATCA+AGG	0.573698	6.3:-49196909	None:intergenic
AAGGTCTAGGAAGCTTTCTA+GGG	0.575889	6.3:+49197064	MS.gene84790:CDS
GGAAGTTATCATATAACCAT+GGG	0.577714	6.3:-49196921	None:intergenic
TGCAATGCTCTCCTAAGCCT+CGG	0.577931	6.3:+49198635	MS.gene84790:CDS
ATTCAACCCAAAGTAGGTCA+AGG	0.579948	6.3:+49197045	MS.gene84790:CDS
AGAATGAAGGCCCTTCAGAA+TGG	0.587277	6.3:+49197771	MS.gene84790:CDS
TGGAAGTTATCATATAACCA+TGG	0.589493	6.3:-49196922	None:intergenic
TTGCTGCTGATGGGGATATG+GGG	0.590108	6.3:+49197805	MS.gene84790:CDS
ACTGATTGGTCATACAGATA+AGG	0.595655	6.3:+49197263	MS.gene84790:CDS
CAAAACAATCCTGCTGATGG+TGG	0.596395	6.3:+49197423	MS.gene84790:CDS
CTGGATCGGAACTGAAGAAG+AGG	0.597418	6.3:+49197745	MS.gene84790:CDS
GTACTGCTGCAACTAACCGC+TGG	0.598254	6.3:+49197370	MS.gene84790:CDS
TGATAACTTCCATATTGCCA+TGG	0.602021	6.3:+49196933	MS.gene84790:CDS
TGGCGTGTCCGAGCTAGTAA+TGG	0.603265	6.3:+49197180	MS.gene84790:CDS
TACGATCACAAAATCTGTTG+AGG	0.605542	6.3:+49196840	MS.gene84790:CDS
GTTTCAGTTCCATCATAAGG+TGG	0.609100	6.3:+49196873	MS.gene84790:CDS
ACAGGTGTGAAATTGGCAGC+CGG	0.610215	6.3:-49197690	None:intergenic
TGAGCATAATGAAATGGCCG+AGG	0.623885	6.3:-49198652	None:intergenic
AAGCATATCATGTTTGATTG+CGG	0.633966	6.3:-49197532	None:intergenic
ACTGGATTTCTCGATCTGCA+AGG	0.638048	6.3:-49196765	None:intergenic
ACCGCTGCCAAAGCAAAACA+AGG	0.638892	6.3:+49197564	MS.gene84790:CDS
GACATTCGAACATTAAAACT+CGG	0.644790	6.3:-49197489	None:intergenic
TGGAGTAGCACCATTCTGAA+GGG	0.645130	6.3:-49197781	None:intergenic
CCGGTAGACCAAGCACCACA+GGG	0.648540	6.3:-49197671	None:intergenic
GGGTCGCTCAAAGCTTATGA+CGG	0.652222	6.3:+49197084	MS.gene84790:CDS
TCTGCTGCCTCCACGCCCTG+TGG	0.652463	6.3:+49197656	MS.gene84790:CDS
CCAAGCACCACAGGGCGTGG+AGG	0.656283	6.3:-49197663	None:intergenic
GTGTCCTTGATGAAGGCCCA+TGG	0.656413	6.3:+49196905	MS.gene84790:CDS
GATGATGGTGTTCGGAACTG+GGG	0.663892	6.3:+49197315	MS.gene84790:CDS
GATGGCAGTAGGTTCAGGTG+CGG	0.671623	6.3:-49196716	None:intergenic
ATAGGATAATGATCTGACGC+AGG	0.682741	6.3:-49198607	None:intergenic
GCCATGGATAGAATAAACCC+TGG	0.684951	6.3:+49196949	MS.gene84790:CDS
ATCAGAGACCGAGTTCCCTG+TGG	0.688280	6.3:-49197634	None:intergenic
CAAAGCTAGGCACGACACCA+GGG	0.726322	6.3:-49196966	None:intergenic
GAATAGGGTCTTGAAGCCAG+CGG	0.734360	6.3:-49197386	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AACTTTATGTATGAAAAATT+GGG	+	chr6.3:49197219-49197238	MS.gene84790:CDS	15.0%
!!	TAACTTTATGTATGAAAAAT+TGG	+	chr6.3:49197218-49197237	MS.gene84790:CDS	15.0%
!!!	GTAGTTCTTCAATTTTATTT+TGG	-	chr6.3:49198072-49198091	None:intergenic	20.0%
!	AAATGTTGAGCATAATGAAA+TGG	-	chr6.3:49198661-49198680	None:intergenic	25.0%
!	ATAAATTATTTGCAAGAGCA+CGG	-	chr6.3:49198543-49198562	None:intergenic	25.0%
!	GAAATTATAGATACTGTTCT+TGG	+	chr6.3:49198220-49198239	MS.gene84790:intron	25.0%
!	TTCAACAGTTATATGATTGT+TGG	-	chr6.3:49198203-49198222	None:intergenic	25.0%
!	TTTAAATCAGGAATTGTACT+CGG	-	chr6.3:49197992-49198011	None:intergenic	25.0%
!!	TATTATGGTTTTCCAAATAG+TGG	+	chr6.3:49198262-49198281	MS.gene84790:intron	25.0%
	AAGCATATCATGTTTGATTG+CGG	-	chr6.3:49197535-49197554	None:intergenic	30.0%
	ATAGGAATTGATGTTAGTCA+TGG	+	chr6.3:49197837-49197856	MS.gene84790:intron	30.0%
	GACATTCGAACATTAAAACT+CGG	-	chr6.3:49197492-49197511	None:intergenic	30.0%
	GGAAGTTATCATATAACCAT+GGG	-	chr6.3:49196924-49196943	None:intergenic	30.0%
	GTATGATGAAAATGCTGTAA+AGG	+	chr6.3:49197896-49197915	MS.gene84790:intron	30.0%
	GTGCTCTTGCAAATAATTTA+TGG	+	chr6.3:49198542-49198561	MS.gene84790:intron	30.0%
	TAGGAATTGATGTTAGTCAT+GGG	+	chr6.3:49197838-49197857	MS.gene84790:intron	30.0%
	TGGAAGTTATCATATAACCA+TGG	-	chr6.3:49196925-49196944	None:intergenic	30.0%
	TTAAATCAGGAATTGTACTC+GGG	-	chr6.3:49197991-49198010	None:intergenic	30.0%
	TTATTCTATCCATGGCAATA+TGG	-	chr6.3:49196945-49196964	None:intergenic	30.0%
!	ACAGCATTTTCATCATACAA+AGG	-	chr6.3:49197894-49197913	None:intergenic	30.0%
!	AGATTTTCCAATGATGCATT+CGG	-	chr6.3:49198580-49198599	None:intergenic	30.0%
!	ATTTTCGCTATGAAAATGCT+TGG	+	chr6.3:49198677-49198696	MS.gene84790:CDS	30.0%
!	CTGATTTAAAATACCTAGTC+CGG	+	chr6.3:49198002-49198021	MS.gene84790:intron	30.0%
!	TAGTAATGGTTCTTTTGTGA+CGG	+	chr6.3:49197194-49197213	MS.gene84790:CDS	30.0%
!!!	TCTGAATCACATCGATTTTT+GGG	+	chr6.3:49196993-49197012	MS.gene84790:CDS	30.0%
!!!	TTGAGCAACAGGTTTTAAAT+AGG	-	chr6.3:49197343-49197362	None:intergenic	30.0%
	AGGAATTGATGTTAGTCATG+GGG	+	chr6.3:49197839-49197858	MS.gene84790:intron	35.0%
	CAAAAATCGATGTGATTCAG+AGG	-	chr6.3:49196994-49197013	None:intergenic	35.0%
	CAAAAGAACCATTACTAGCT+CGG	-	chr6.3:49197191-49197210	None:intergenic	35.0%
	CCTTGATGCTAAAGAGAAAA+GGG	+	chr6.3:49198372-49198391	MS.gene84790:intron	35.0%
	CGTCAGATCATTATCCTATA+TGG	+	chr6.3:49198611-49198630	MS.gene84790:CDS	35.0%
	CTTGATGCTAAAGAGAAAAG+GGG	+	chr6.3:49198373-49198392	MS.gene84790:intron	35.0%
	CTTGTTTCAGTTCCATCATA+AGG	+	chr6.3:49196870-49196889	MS.gene84790:CDS	35.0%
	GAAGAAGAGGAAAAGAATGA+AGG	+	chr6.3:49197758-49197777	MS.gene84790:CDS	35.0%
	GATATGGGGAATGATGTAAT+AGG	+	chr6.3:49197819-49197838	MS.gene84790:CDS	35.0%
	TAATAACCAGTAACTCTCCA+AGG	-	chr6.3:49198247-49198266	None:intergenic	35.0%
	TACGATCACAAAATCTGTTG+AGG	+	chr6.3:49196840-49196859	MS.gene84790:CDS	35.0%
	TATGTTTCCGAATGCATCAT+TGG	+	chr6.3:49198570-49198589	MS.gene84790:intron	35.0%
	TCACTTAGGAATAGAAGATC+CGG	-	chr6.3:49198037-49198056	None:intergenic	35.0%
	TCCTTGATGCTAAAGAGAAA+AGG	+	chr6.3:49198371-49198390	MS.gene84790:intron	35.0%
	TGATAACTTCCATATTGCCA+TGG	+	chr6.3:49196933-49196952	MS.gene84790:CDS	35.0%
	TTGATGCTAAAGAGAAAAGG+GGG	+	chr6.3:49198374-49198393	MS.gene84790:intron	35.0%
!	ACTGATTGGTCATACAGATA+AGG	+	chr6.3:49197263-49197282	MS.gene84790:CDS	35.0%
!	CAACTTTCTAATCGTTTTGC+AGG	+	chr6.3:49198316-49198335	MS.gene84790:intron	35.0%
!	TGGAGAGTTACTGGTTATTA+TGG	+	chr6.3:49198247-49198266	MS.gene84790:intron	35.0%
!!	CGGACTAGGTATTTTAAATC+AGG	-	chr6.3:49198004-49198023	None:intergenic	35.0%
!!	TTGGGTTGAATGAAACCAAA+AGG	-	chr6.3:49197036-49197055	None:intergenic	35.0%
!!!	AATTGGGTGTTTTTTGTCAC+AGG	+	chr6.3:49197235-49197254	MS.gene84790:CDS	35.0%
!!!	ACTCATACCTTGTTTTGCTT+TGG	-	chr6.3:49197574-49197593	None:intergenic	35.0%
!!!	ATTTTTGGGTGCAAGTACAT+GGG	+	chr6.3:49197007-49197026	MS.gene84790:CDS	35.0%
!!!	CTCTGAATCACATCGATTTT+TGG	+	chr6.3:49196992-49197011	MS.gene84790:CDS	35.0%
!!!	GAAGAACTACGTTTTTTGCT+TGG	+	chr6.3:49198082-49198101	MS.gene84790:intron	35.0%
	AAATCTCCCAATATGCACCA+CGG	-	chr6.3:49198343-49198362	None:intergenic	40.0%
	AAGGTCTAGGAAGCTTTCTA+GGG	+	chr6.3:49197064-49197083	MS.gene84790:CDS	40.0%
	AATTGATGTTAGTCATGGGG+GGG	+	chr6.3:49197842-49197861	MS.gene84790:intron	40.0%
	ACCAGGGTTTATTCTATCCA+TGG	-	chr6.3:49196953-49196972	None:intergenic	40.0%
	ATAGGATAATGATCTGACGC+AGG	-	chr6.3:49198610-49198629	None:intergenic	40.0%
	ATCCTCGAAAACTGCTTGAT+TGG	+	chr6.3:49196736-49196755	MS.gene84790:CDS	40.0%
	ATCTGGTCAAATGCATTTCC+TGG	+	chr6.3:49197602-49197621	MS.gene84790:CDS	40.0%
	ATTCAACCCAAAGTAGGTCA+AGG	+	chr6.3:49197045-49197064	MS.gene84790:CDS	40.0%
	CGACATACGTTCACTGAAAT+AGG	-	chr6.3:49196794-49196813	None:intergenic	40.0%
	GAATTGATGTTAGTCATGGG+GGG	+	chr6.3:49197841-49197860	MS.gene84790:intron	40.0%
	GATGAAAATGCTGTAAAGGC+AGG	+	chr6.3:49197900-49197919	MS.gene84790:intron	40.0%
	GCTACTAGACTCATTTACCT+AGG	-	chr6.3:49197944-49197963	None:intergenic	40.0%
	GGAATTGATGTTAGTCATGG+GGG	+	chr6.3:49197840-49197859	MS.gene84790:intron	40.0%
	GGTAAATGAGTCTAGTAGCA+TGG	+	chr6.3:49197945-49197964	MS.gene84790:intron	40.0%
	GGTTTCATTCAACCCAAAGT+AGG	+	chr6.3:49197039-49197058	MS.gene84790:CDS	40.0%
	GTCTAGTAGCATGGAATTGT+CGG	+	chr6.3:49197954-49197973	MS.gene84790:intron	40.0%
	GTTCACTGAAATAGGCAAAC+TGG	-	chr6.3:49196786-49196805	None:intergenic	40.0%
	GTTTCAGTTCCATCATAAGG+TGG	+	chr6.3:49196873-49196892	MS.gene84790:CDS	40.0%
	TAGATACTGTTCTTGGTCCT+TGG	+	chr6.3:49198227-49198246	MS.gene84790:intron	40.0%
	TATGAACTGGACTCTGATGA+TGG	+	chr6.3:49197300-49197319	MS.gene84790:CDS	40.0%
	TCATACAGATAAGGTGTGTC+CGG	+	chr6.3:49197272-49197291	MS.gene84790:CDS	40.0%
	TCTAGTAGCATGGAATTGTC+GGG	+	chr6.3:49197955-49197974	MS.gene84790:intron	40.0%
!	CCCTTTTCTCTTTAGCATCA+AGG	-	chr6.3:49198375-49198394	None:intergenic	40.0%
!	CTGTCCCTTTGAAAAAGGAA+TGG	+	chr6.3:49197160-49197179	MS.gene84790:CDS	40.0%
!	TGATTGCGGTAAGTTGACTT+TGG	-	chr6.3:49197521-49197540	None:intergenic	40.0%
!	TGTCACTGTCCCTTTGAAAA+AGG	+	chr6.3:49197155-49197174	MS.gene84790:CDS	40.0%
!!	AATCAAGCAGTTTTCGAGGA+TGG	-	chr6.3:49196737-49196756	None:intergenic	40.0%
!!!	ACACGCCATTCCTTTTTCAA+AGG	-	chr6.3:49197168-49197187	None:intergenic	40.0%
!!!	CACGCCATTCCTTTTTCAAA+GGG	-	chr6.3:49197167-49197186	None:intergenic	40.0%
!!!	GATTTTTGGGTGCAAGTACA+TGG	+	chr6.3:49197006-49197025	MS.gene84790:CDS	40.0%
	AAACCTGTTGCTCAACGTGT+TGG	+	chr6.3:49197348-49197367	MS.gene84790:CDS	45.0%
	AACCTTTCTTCAACAGCACG+TGG	-	chr6.3:49198517-49198536	None:intergenic	45.0%
	AAGGCTCTTGAACCAGGTAA+AGG	-	chr6.3:49198488-49198507	None:intergenic	45.0%
	AAGTCAAGCCATCAAGGTTG+AGG	-	chr6.3:49196663-49196682	None:intergenic	45.0%
	ACTGGATTTCTCGATCTGCA+AGG	-	chr6.3:49196768-49196787	None:intergenic	45.0%
	AGAATGAAGGCCCTTCAGAA+TGG	+	chr6.3:49197771-49197790	MS.gene84790:CDS	45.0%
	AGGCTCTTGAACCAGGTAAA+GGG	-	chr6.3:49198487-49198506	None:intergenic	45.0%
	ATAACCATGGGCCTTCATCA+AGG	-	chr6.3:49196912-49196931	None:intergenic	45.0%
	ATATCCCCATCAGCAGCAAA+TGG	-	chr6.3:49197804-49197823	None:intergenic	45.0%
	ATGGAGTAGCACCATTCTGA+AGG	-	chr6.3:49197785-49197804	None:intergenic	45.0%
	CAAAACAATCCTGCTGATGG+TGG	+	chr6.3:49197423-49197442	MS.gene84790:CDS	45.0%
	CAAAGGGACAGTGACATCAA+TGG	-	chr6.3:49197151-49197170	None:intergenic	45.0%
	CAAGGTCTAGGAAGCTTTCT+AGG	+	chr6.3:49197063-49197082	MS.gene84790:CDS	45.0%
	CACCAAAACAATCCTGCTGA+TGG	+	chr6.3:49197420-49197439	MS.gene84790:CDS	45.0%
	CAGACAAAGTCAAGCCATCA+AGG	-	chr6.3:49196669-49196688	None:intergenic	45.0%
	CCATCAAGGTTGAGGTTTGA+GGG	-	chr6.3:49196655-49196674	None:intergenic	45.0%
	CCTAGACCTTGACCTACTTT+GGG	-	chr6.3:49197054-49197073	None:intergenic	45.0%
	CGAAAGCCATTAATGAGCCA+CGG	-	chr6.3:49198415-49198434	None:intergenic	45.0%
	CTAGACTCATTTACCTAGGC+AGG	-	chr6.3:49197940-49197959	None:intergenic	45.0%
	CTAGTAGCATGGAATTGTCG+GGG	+	chr6.3:49197956-49197975	MS.gene84790:intron	45.0%
	GAGTCCAGTTCATATAGCTC+CGG	-	chr6.3:49197294-49197313	None:intergenic	45.0%
	GCAAAACAAGGTATGAGTGC+TGG	+	chr6.3:49197576-49197595	MS.gene84790:CDS	45.0%
	GCCATGGATAGAATAAACCC+TGG	+	chr6.3:49196949-49196968	MS.gene84790:CDS	45.0%
	GCTCATTAATGGCTTTCGTC+GGG	+	chr6.3:49198417-49198436	MS.gene84790:intron	45.0%
	GGCTCATTAATGGCTTTCGT+CGG	+	chr6.3:49198416-49198435	MS.gene84790:intron	45.0%
	GGCTTGACTTTGTCTGAAGA+GGG	+	chr6.3:49196673-49196692	MS.gene84790:CDS	45.0%
	GTAAAGGGATACCCTTCGAA+AGG	-	chr6.3:49198472-49198491	None:intergenic	45.0%
	GTGTTGCATCCACCTTATGA+TGG	-	chr6.3:49196885-49196904	None:intergenic	45.0%
	TAATGAAATGGCCGAGGCTT+AGG	-	chr6.3:49198649-49198668	None:intergenic	45.0%
	TCACATGATGACTCTGATGC+TGG	+	chr6.3:49197726-49197745	MS.gene84790:CDS	45.0%
	TCCTAGACCTTGACCTACTT+TGG	-	chr6.3:49197055-49197074	None:intergenic	45.0%
	TGAGCATAATGAAATGGCCG+AGG	-	chr6.3:49198655-49198674	None:intergenic	45.0%
	TGATGACTCTGATGCTGGAT+CGG	+	chr6.3:49197731-49197750	MS.gene84790:CDS	45.0%
	TGGAGTAGCACCATTCTGAA+GGG	-	chr6.3:49197784-49197803	None:intergenic	45.0%
	TGGCTTGACTTTGTCTGAAG+AGG	+	chr6.3:49196672-49196691	MS.gene84790:CDS	45.0%
	TGTCTGACGTACCTTTCGAA+GGG	+	chr6.3:49198458-49198477	MS.gene84790:intron	45.0%
	TTCTTCTTCCACAGGGAACT+CGG	+	chr6.3:49197626-49197645	MS.gene84790:CDS	45.0%
	TTGTCTGACGTACCTTTCGA+AGG	+	chr6.3:49198457-49198476	MS.gene84790:intron	45.0%
	TTTACCTGGTTCAAGAGCCT+TGG	+	chr6.3:49198487-49198506	MS.gene84790:intron	45.0%
	TTTGCTGCTGATGGGGATAT+GGG	+	chr6.3:49197804-49197823	MS.gene84790:CDS	45.0%
!	ATTTGCTGCTGATGGGGATA+TGG	+	chr6.3:49197803-49197822	MS.gene84790:CDS	45.0%
!	CACCATCAGCAGGATTGTTT+TGG	-	chr6.3:49197425-49197444	None:intergenic	45.0%
!	CTACTCCATTTGCTGCTGAT+GGG	+	chr6.3:49197796-49197815	MS.gene84790:CDS	45.0%
!	GAAAGGTACGTCAGACAAAC+CGG	-	chr6.3:49198455-49198474	None:intergenic	45.0%
!	GACCAATCAAGCAGTTTTCG+AGG	-	chr6.3:49196741-49196760	None:intergenic	45.0%
!	TACTCCATTTGCTGCTGATG+GGG	+	chr6.3:49197797-49197816	MS.gene84790:CDS	45.0%
!	TGATTCAGAGGCACAAAGCT+AGG	-	chr6.3:49196982-49197001	None:intergenic	45.0%
!!	GGAGAGCATTGCAACCATAT+AGG	-	chr6.3:49198628-49198647	None:intergenic	45.0%
!!	TGATGATGGTGTTCGGAACT+GGG	+	chr6.3:49197314-49197333	MS.gene84790:CDS	45.0%
!!	TGGACTCTGATGATGGTGTT+CGG	+	chr6.3:49197307-49197326	MS.gene84790:CDS	45.0%
!!!	ACCTTGTTTTGCTTTGGCAG+CGG	-	chr6.3:49197568-49197587	None:intergenic	45.0%
!!!	GGTGTTTTTTGTCACAGGTG+TGG	+	chr6.3:49197240-49197259	MS.gene84790:CDS	45.0%
!!!	TCAGCAGGATTGTTTTGGTG+CGG	-	chr6.3:49197420-49197439	None:intergenic	45.0%
	ACAGGTGTGAAATTGGCAGC+CGG	-	chr6.3:49197693-49197712	None:intergenic	50.0%
	ACCGCTGCCAAAGCAAAACA+AGG	+	chr6.3:49197564-49197583	MS.gene84790:CDS	50.0%
	AGGTCTCCGTGGCTCATTAA+TGG	+	chr6.3:49198406-49198425	MS.gene84790:intron	50.0%
	CCCAAAGTAGGTCAAGGTCT+AGG	+	chr6.3:49197051-49197070	MS.gene84790:CDS	50.0%
	CCCTCAAACCTCAACCTTGA+TGG	+	chr6.3:49196652-49196671	MS.gene84790:CDS	50.0%
	CTGGATCGGAACTGAAGAAG+AGG	+	chr6.3:49197745-49197764	MS.gene84790:CDS	50.0%
	CTTGGTCCTTGGAGAGTTAC+TGG	+	chr6.3:49198238-49198257	MS.gene84790:intron	50.0%
	GAAGATCCGGATTGAAGTGC+CGG	-	chr6.3:49198024-49198043	None:intergenic	50.0%
	GAATAGGGTCTTGAAGCCAG+CGG	-	chr6.3:49197389-49197408	None:intergenic	50.0%
	GCAACACGTGTCCTTGATGA+AGG	+	chr6.3:49196898-49196917	MS.gene84790:CDS	50.0%
	GCAGCCAACAGGTGTGAAAT+TGG	-	chr6.3:49197700-49197719	None:intergenic	50.0%
	GCAGTTCGACGACCACTATT+TGG	-	chr6.3:49198277-49198296	None:intergenic	50.0%
	GCCATCAAGGTTGAGGTTTG+AGG	-	chr6.3:49196656-49196675	None:intergenic	50.0%
	GCTGCCAATTTCACACCTGT+TGG	+	chr6.3:49197693-49197712	MS.gene84790:CDS	50.0%
	GGGTCGCTCAAAGCTTATGA+CGG	+	chr6.3:49197084-49197103	MS.gene84790:CDS	50.0%
	GGTGAGCAAGTGTCTCACTT+AGG	-	chr6.3:49198051-49198070	None:intergenic	50.0%
	GTACCAACACGTTGAGCAAC+AGG	-	chr6.3:49197354-49197373	None:intergenic	50.0%
	GTGATCGTAACCCGTTTGAC+TGG	-	chr6.3:49196829-49196848	None:intergenic	50.0%
	GTGTCCGGAGCTATATGAAC+TGG	+	chr6.3:49197287-49197306	MS.gene84790:CDS	50.0%
	TCCTGGCTTCTTCTTCCACA+GGG	+	chr6.3:49197619-49197638	MS.gene84790:CDS	50.0%
	TGCAATGCTCTCCTAAGCCT+CGG	+	chr6.3:49198635-49198654	MS.gene84790:CDS	50.0%
	TGTGTCAATGTAGACCGCAC+CGG	+	chr6.3:49198115-49198134	MS.gene84790:intron	50.0%
	TTCCTGGCTTCTTCTTCCAC+AGG	+	chr6.3:49197618-49197637	MS.gene84790:CDS	50.0%
	TTGCTGCTGATGGGGATATG+GGG	+	chr6.3:49197805-49197824	MS.gene84790:CDS	50.0%
!	AGAAAAGGGGGCGCAACATA+AGG	+	chr6.3:49198386-49198405	MS.gene84790:intron	50.0%
!	CACCACGTGCTGTTGAAGAA+AGG	+	chr6.3:49198512-49198531	MS.gene84790:intron	50.0%
!	CTAATCGTTTTGCAGGTCCG+TGG	+	chr6.3:49198323-49198342	MS.gene84790:intron	50.0%
!	GATGATGGTGTTCGGAACTG+GGG	+	chr6.3:49197315-49197334	MS.gene84790:CDS	50.0%
!	GCTACTCCATTTGCTGCTGA+TGG	+	chr6.3:49197795-49197814	MS.gene84790:CDS	50.0%
!	TGTCACAGGTGTGGACTGAT+TGG	+	chr6.3:49197249-49197268	MS.gene84790:CDS	50.0%
!!	CAAGTACATGGGCTGCCTTT+TGG	+	chr6.3:49197018-49197037	MS.gene84790:CDS	50.0%
!!	CAGTTTTCGAGGATGGCAGT+AGG	-	chr6.3:49196730-49196749	None:intergenic	50.0%
!!	CTGATGATGGTGTTCGGAAC+TGG	+	chr6.3:49197313-49197332	MS.gene84790:CDS	50.0%
!!	GGTATGAGTGCTGGTCTATC+TGG	+	chr6.3:49197585-49197604	MS.gene84790:CDS	50.0%
!!	TCGAAGGGTATCCCTTTACC+TGG	+	chr6.3:49198473-49198492	MS.gene84790:intron	50.0%
!!!	GCGGGGGTCTTGCTTTATTT+TGG	+	chr6.3:49198143-49198162	MS.gene84790:intron	50.0%
	AAAGGCAGGCCCTGATGATC+AGG	+	chr6.3:49197914-49197933	MS.gene84790:intron	55.0%
	ACAAAGCTAGGCACGACACC+AGG	-	chr6.3:49196970-49196989	None:intergenic	55.0%
	AGGTGCGGTTTCGAGGTTGA+GGG	-	chr6.3:49196704-49196723	None:intergenic	55.0%
	ATCAGAGACCGAGTTCCCTG+TGG	-	chr6.3:49197637-49197656	None:intergenic	55.0%
	CAAAGCTAGGCACGACACCA+GGG	-	chr6.3:49196969-49196988	None:intergenic	55.0%
	CCTAGTCCGGCACTTCAATC+CGG	+	chr6.3:49198015-49198034	MS.gene84790:intron	55.0%
	CGTCGGGCAGTTCTTGATTC+CGG	+	chr6.3:49198433-49198452	MS.gene84790:intron	55.0%
	CTAGGCAGGCCTGATCATCA+GGG	-	chr6.3:49197926-49197945	None:intergenic	55.0%
	GATGGCAGTAGGTTCAGGTG+CGG	-	chr6.3:49196719-49196738	None:intergenic	55.0%
	GCAGGTCCGTGGTGCATATT+GGG	+	chr6.3:49198334-49198353	MS.gene84790:intron	55.0%
	GCATGGAATTGTCGGGGAGT+AGG	+	chr6.3:49197962-49197981	MS.gene84790:intron	55.0%
	GTACTGCTGCAACTAACCGC+TGG	+	chr6.3:49197370-49197389	MS.gene84790:CDS	55.0%
	GTGCCTGGAAGCCAGTCAAA+CGG	+	chr6.3:49196815-49196834	MS.gene84790:CDS	55.0%
	GTGTCCTTGATGAAGGCCCA+TGG	+	chr6.3:49196905-49196924	MS.gene84790:CDS	55.0%
	TAGGTTCAGGTGCGGTTTCG+AGG	-	chr6.3:49196711-49196730	None:intergenic	55.0%
	TCCCTGTGGAAGAAGAAGCC+AGG	-	chr6.3:49197623-49197642	None:intergenic	55.0%
	TCGAGGATGGCAGTAGGTTC+AGG	-	chr6.3:49196724-49196743	None:intergenic	55.0%
	TGCAGGTCCGTGGTGCATAT+TGG	+	chr6.3:49198333-49198352	MS.gene84790:intron	55.0%
	TGCCTGGAAGCCAGTCAAAC+GGG	+	chr6.3:49196816-49196835	MS.gene84790:CDS	55.0%
	TGGCGTGTCCGAGCTAGTAA+TGG	+	chr6.3:49197180-49197199	MS.gene84790:CDS	55.0%
	TGTGATTCGTCGCAGCCAAC+AGG	-	chr6.3:49197711-49197730	None:intergenic	55.0%
	TGTGCCAAGGCTCTTGAACC+AGG	-	chr6.3:49198494-49198513	None:intergenic	55.0%
!	AATGTAGACCGCACCGGTAG+AGG	+	chr6.3:49198121-49198140	MS.gene84790:intron	55.0%
!	GTTTTGCTTTGGCAGCGGTC+TGG	-	chr6.3:49197563-49197582	None:intergenic	55.0%
!!	AACCCGTTTGACTGGCTTCC+AGG	-	chr6.3:49196821-49196840	None:intergenic	55.0%
!!!	TTGTTTTGGTGCGGCACAGC+AGG	-	chr6.3:49197411-49197430	None:intergenic	55.0%
	CAACAGCACGTGGTGTGCCA+AGG	-	chr6.3:49198507-49198526	None:intergenic	60.0%
	CAGGTGCGGTTTCGAGGTTG+AGG	-	chr6.3:49196705-49196724	None:intergenic	60.0%
	CCCTGTGGTGCTTGGTCTAC+CGG	+	chr6.3:49197671-49197690	MS.gene84790:CDS	60.0%
	CCGGTAGACCAAGCACCACA+GGG	-	chr6.3:49197674-49197693	None:intergenic	60.0%
	CCTAGGCAGGCCTGATCATC+AGG	-	chr6.3:49197927-49197946	None:intergenic	60.0%
	CCTGATGATCAGGCCTGCCT+AGG	+	chr6.3:49197924-49197943	MS.gene84790:intron	60.0%
	GCAACTCCAGCAGTCGCGTT+AGG	-	chr6.3:49197459-49197478	None:intergenic	60.0%
	GCAGCAAAGCCACCATCAGC+AGG	-	chr6.3:49197435-49197454	None:intergenic	60.0%
	GGCGCAACATAAGGTCTCCG+TGG	+	chr6.3:49198395-49198414	MS.gene84790:intron	60.0%
	GGTGCGGCACAGCAGGAATA+GGG	-	chr6.3:49197404-49197423	None:intergenic	60.0%
	GTGAACGTATGTCGCGTGCC+TGG	+	chr6.3:49196800-49196819	MS.gene84790:CDS	60.0%
	GTGGTCGTCGAACTGCTGCT+TGG	+	chr6.3:49198281-49198300	MS.gene84790:intron	60.0%
	TGGTGCGGCACAGCAGGAAT+AGG	-	chr6.3:49197405-49197424	None:intergenic	60.0%
!!	CCGGATTGAAGTGCCGGACT+AGG	-	chr6.3:49198018-49198037	None:intergenic	60.0%
	AGACCAAGCACCACAGGGCG+TGG	-	chr6.3:49197669-49197688	None:intergenic	65.0%
	AGCAAGACCCCCGCCTCTAC+CGG	-	chr6.3:49198137-49198156	None:intergenic	65.0%
	GCCGGTAGACCAAGCACCAC+AGG	-	chr6.3:49197675-49197694	None:intergenic	65.0%
	GCTGCTCCTAACGCGACTGC+TGG	+	chr6.3:49197450-49197469	MS.gene84790:CDS	65.0%
!	GTAGACCGCACCGGTAGAGG+CGG	+	chr6.3:49198124-49198143	MS.gene84790:intron	65.0%
!	TAGACCGCACCGGTAGAGGC+GGG	+	chr6.3:49198125-49198144	MS.gene84790:intron	65.0%
	CCAAGCACCACAGGGCGTGG+AGG	-	chr6.3:49197666-49197685	None:intergenic	70.0%
	CCTCCACGCCCTGTGGTGCT+TGG	+	chr6.3:49197663-49197682	MS.gene84790:CDS	70.0%
	TCTGCTGCCTCCACGCCCTG+TGG	+	chr6.3:49197656-49197675	MS.gene84790:CDS	70.0%
!	AGACCGCACCGGTAGAGGCG+GGG	+	chr6.3:49198126-49198145	MS.gene84790:intron	70.0%
	GACCCCCGCCTCTACCGGTG+CGG	-	chr6.3:49198132-49198151	None:intergenic	75.0%
!	GACCGCACCGGTAGAGGCGG+GGG	+	chr6.3:49198127-49198146	MS.gene84790:intron	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.3	gene	49196646	49198706	49196646	ID=MS.gene84790
chr6.3	mRNA	49196646	49198706	49196646	ID=MS.gene84790.t1;Parent=MS.gene84790
chr6.3	exon	49196646	49197848	49196646	ID=MS.gene84790.t1.exon1;Parent=MS.gene84790.t1
chr6.3	CDS	49196646	49197848	49196646	ID=cds.MS.gene84790.t1;Parent=MS.gene84790.t1
chr6.3	exon	49198605	49198706	49198605	ID=MS.gene84790.t1.exon2;Parent=MS.gene84790.t1
chr6.3	CDS	49198605	49198706	49198605	ID=cds.MS.gene84790.t1;Parent=MS.gene84790.t1

Gene Sequence

>MS.gene84790

ATGGATCCCTCAAACCTCAACCTTGATGGCTTGACTTTGTCTGAAGAGGGTTTAACCCTCAACCTCGAAACCGCACCTGAACCTACTGCCATCCTCGAAAACTGCTTGATTGGTCGCGTCCTTGCAGATCGAGAAATCCAGTTTGCCTATTTCAGTGAACGTATGTCGCGTGCCTGGAAGCCAGTCAAACGGGTTACGATCACAAAATCTGTTGAGGATCGTTTCTTGTTTCAGTTCCATCATAAGGTGGATGCAACACGTGTCCTTGATGAAGGCCCATGGTTATATGATAACTTCCATATTGCCATGGATAGAATAAACCCTGGTGTCGTGCCTAGCTTTGTGCCTCTGAATCACATCGATTTTTGGGTGCAAGTACATGGGCTGCCTTTTGGTTTCATTCAACCCAAAGTAGGTCAAGGTCTAGGAAGCTTTCTAGGGTCGCTCAAAGCTTATGACGGTCGAAACACGATTCATAGCGCTTATATGCGCATCAAAGTTGCCATTGATGTCACTGTCCCTTTGAAAAAGGAATGGCGTGTCCGAGCTAGTAATGGTTCTTTTGTGACGGTTAACTTTATGTATGAAAAATTGGGTGTTTTTTGTCACAGGTGTGGACTGATTGGTCATACAGATAAGGTGTGTCCGGAGCTATATGAACTGGACTCTGATGATGGTGTTCGGAACTGGGGTGCCTATTTAAAACCTGTTGCTCAACGTGTTGGTACTGCTGCAACTAACCGCTGGCTTCAAGACCCTATTCCTGCTGTGCCGCACCAAAACAATCCTGCTGATGGTGGCTTTGCTGCTCCTAACGCGACTGCTGGAGTTGCAGACACTGTGCCGAGTTTTAATGTTCGAATGTCTGCTGTCCAAAGTCAACTTACCGCAATCAAACATGATATGCTTGCTGTCCAGACCGCTGCCAAAGCAAAACAAGGTATGAGTGCTGGTCTATCTGGTCAAATGCATTTCCTGGCTTCTTCTTCCACAGGGAACTCGGTCTCTGATCTGCTGCCTCCACGCCCTGTGGTGCTTGGTCTACCGGCTGCCAATTTCACACCTGTTGGCTGCGACGAATCACATGATGACTCTGATGCTGGATCGGAACTGAAGAAGAGGAAAAGAATGAAGGCCCTTCAGAATGGTGCTACTCCATTTGCTGCTGATGGGGATATGGGGAATGATGTAATAGGAATTGATGTTAGTCATGGGGGGGATTTAGATATGAATGTAATTGCTAATCCTTTGTATGATGAAAATGCTGTAAAGGCAGGCCCTGATGATCAGGCCTGCCTAGGTAAATGAGTCTAGTAGCATGGAATTGTCGGGGAGTAGGTAGCCCGAGTACAATTCCTGATTTAAAATACCTAGTCCGGCACTTCAATCCGGATCTTCTATTCCTAAGTGAGACACTTGCTCACCAAAATAAAATTGAAGAACTACGTTTTTTGCTTGGTTACGATTCTTGTGTCAATGTAGACCGCACCGGTAGAGGCGGGGGTCTTGCTTTATTTTGGAGAAATTCTTTTAATTGTCAACTTATTGATTTTTCCAACAATCATATAACTGTTGAAATTATAGATACTGTTCTTGGTCCTTGGAGAGTTACTGGTTATTATGGTTTTCCAAATAGTGGTCGTCGAACTGCTGCTTGGAATTTTCTTCGTCAACTTTCTAATCGTTTTGCAGGTCCGTGGTGCATATTGGGAGATTTTAACGACATCCTTGATGCTAAAGAGAAAAGGGGGCGCAACATAAGGTCTCCGTGGCTCATTAATGGCTTTCGTCGGGCAGTTCTTGATTCCGGTTTGTCTGACGTACCTTTCGAAGGGTATCCCTTTACCTGGTTCAAGAGCCTTGGCACACCACGTGCTGTTGAAGAAAGGTTAGACCGTGCTCTTGCAAATAATTTATGGTTTACTATGTTTCCGAATGCATCATTGGAAAATCTTGTAGCACCTGCGTCAGATCATTATCCTATATGGTTGCAATGCTCTCCTAAGCCTCGGCCATTTCATTATGCTCAACATTTTCGCTATGAAAATGCTTGGCAGTTAG

Protein sequence

>MS.gene84790.t1

MDPSNLNLDGLTLSEEGLTLNLETAPEPTAILENCLIGRVLADREIQFAYFSERMSRAWKPVKRVTITKSVEDRFLFQFHHKVDATRVLDEGPWLYDNFHIAMDRINPGVVPSFVPLNHIDFWVQVHGLPFGFIQPKVGQGLGSFLGSLKAYDGRNTIHSAYMRIKVAIDVTVPLKKEWRVRASNGSFVTVNFMYEKLGVFCHRCGLIGHTDKVCPELYELDSDDGVRNWGAYLKPVAQRVGTAATNRWLQDPIPAVPHQNNPADGGFAAPNATAGVADTVPSFNVRMSAVQSQLTAIKHDMLAVQTAAKAKQGMSAGLSGQMHFLASSSTGNSVSDLLPPRPVVLGLPAANFTPVGCDESHDDSDAGSELKKRKRMKALQNGATPFAADGDMGNDVIGIDHLRQIIILYGCNALLSLGHFIMLNIFAMKMLGS