AlfalfaGEDB | MS.gene46948

M. sativa cultivar XinJiangDaYe / MS.gene46948

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46948.t1	AES70414.1	56.5	347	82	5	1	345	1	280	1.30E-93	353.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46948.t1	O04244	26.7	135	95	2	83	215	6	138	1.0e-09	66.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46948.t1	G7J017	56.5	347	82	5	1	345	1	280	9.4e-94	353.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene46948	MS.gene98127	PPI
MS.gene46948	MS.gene35202	PPI
MS.gene46948	MS.gene003264	PPI
MS.gene46948	MS.gene054652	PPI
MS.gene46948	MS.gene000634	PPI
MS.gene46948	MS.gene37537	PPI
MS.gene013193	MS.gene46948	PPI
MS.gene08106	MS.gene46948	PPI
MS.gene46948	MS.gene86849	PPI
MS.gene46948	MS.gene42010	PPI
MS.gene46948	MS.gene049512	PPI
MS.gene46948	MS.gene27329	PPI
MS.gene46948	MS.gene41393	PPI
MS.gene46948	MS.gene89815	PPI
MS.gene46948	MS.gene010656	PPI
MS.gene46948	MS.gene016632	PPI
MS.gene46948	MS.gene018474	PPI
MS.gene46948	MS.gene86868	PPI
MS.gene46948	MS.gene058889	PPI
MS.gene46948	MS.gene96163	PPI
MS.gene46948	MS.gene65623	PPI
MS.gene46948	MS.gene012748	PPI
MS.gene46948	MS.gene02896	PPI
MS.gene46948	MS.gene71588	PPI
MS.gene46948	MS.gene050679	PPI
MS.gene46948	MS.gene34463	PPI
MS.gene038676	MS.gene46948	PPI
MS.gene042651	MS.gene46948	PPI
MS.gene46948	MS.gene042614	PPI
MS.gene46948	MS.gene026680	PPI
MS.gene46948	MS.gene61499	PPI
MS.gene46948	MS.gene051449	PPI
MS.gene46948	MS.gene042651	PPI
MS.gene46948	MS.gene019165	PPI
MS.gene46948	MS.gene81194	PPI
MS.gene46948	MS.gene038394	PPI
MS.gene46948	MS.gene019001	PPI
MS.gene46948	MS.gene53904	PPI
MS.gene46948	MS.gene83772	PPI
MS.gene46948	MS.gene73261	PPI
MS.gene46948	MS.gene85538	PPI
MS.gene46948	MS.gene025675	PPI
MS.gene46948	MS.gene055546	PPI
MS.gene46948	MS.gene71637	PPI
MS.gene46948	MS.gene55209	PPI
MS.gene46948	MS.gene96174	PPI
MS.gene46948	MS.gene28718	PPI
MS.gene42903	MS.gene46948	PPI
MS.gene46948	MS.gene022929	PPI
MS.gene46948	MS.gene85295	PPI
MS.gene048747	MS.gene46948	PPI
MS.gene042559	MS.gene46948	PPI
MS.gene22200	MS.gene46948	PPI
MS.gene46948	MS.gene068629	PPI
MS.gene46948	MS.gene009781	PPI
MS.gene46948	MS.gene047954	PPI
MS.gene46948	MS.gene048342	PPI
MS.gene46948	MS.gene069624	PPI
MS.gene46948	MS.gene83979	PPI
MS.gene46948	MS.gene21066	PPI
MS.gene46948	MS.gene013890	PPI
MS.gene46948	MS.gene073582	PPI
MS.gene34812	MS.gene46948	PPI
MS.gene063214	MS.gene46948	PPI
MS.gene46948	MS.gene048072	PPI
MS.gene46948	MS.gene028714	PPI
MS.gene46948	MS.gene042027	PPI
MS.gene46948	MS.gene048706	PPI
MS.gene035626	MS.gene46948	PPI
MS.gene46948	MS.gene69586	PPI
MS.gene46948	MS.gene45083	PPI
MS.gene46948	MS.gene049561	PPI
MS.gene46948	MS.gene008658	PPI
MS.gene067340	MS.gene46948	PPI
MS.gene46948	MS.gene47792	PPI
MS.gene46948	MS.gene80362	PPI
MS.gene46948	MS.gene49057	PPI
MS.gene46948	MS.gene03936	PPI
MS.gene46948	MS.gene43393	PPI
MS.gene69495	MS.gene46948	PPI
MS.gene46948	MS.gene048088	PPI
MS.gene05357	MS.gene46948	PPI
MS.gene46948	MS.gene08708	PPI
MS.gene46948	MS.gene86275	PPI
MS.gene46948	MS.gene034643	PPI
MS.gene46948	MS.gene60059	PPI
MS.gene46948	MS.gene038098	PPI
MS.gene46948	MS.gene012889	PPI
MS.gene46948	MS.gene038757	PPI
MS.gene46948	MS.gene000506	PPI
MS.gene021968	MS.gene46948	PPI
MS.gene46948	MS.gene030090	PPI
MS.gene46948	MS.gene39956	PPI
MS.gene46948	MS.gene028716	PPI
MS.gene46948	MS.gene74639	PPI
MS.gene46948	MS.gene071133	PPI
MS.gene46948	MS.gene60266	PPI
MS.gene46948	MS.gene98467	PPI
MS.gene46948	MS.gene51804	PPI
MS.gene46948	MS.gene013644	PPI
MS.gene46948	MS.gene54051	PPI
MS.gene46948	MS.gene22111	PPI
MS.gene46948	MS.gene049610	PPI
MS.gene46948	MS.gene37955	PPI
MS.gene46948	MS.gene34197	PPI
MS.gene46948	MS.gene045875	PPI
MS.gene46948	MS.gene010890	PPI
MS.gene46948	MS.gene84790	PPI
MS.gene46948	MS.gene055683	PPI
MS.gene46948	MS.gene061579	PPI
MS.gene46948	MS.gene41979	PPI
MS.gene46948	MS.gene04970	PPI
MS.gene46948	MS.gene26038	PPI
MS.gene46948	MS.gene060788	PPI
MS.gene46948	MS.gene43924	PPI
MS.gene46948	MS.gene41643	PPI
MS.gene46948	MS.gene77990	PPI
MS.gene46948	MS.gene062511	PPI
MS.gene46948	MS.gene008861	PPI
MS.gene46948	MS.gene027994	PPI
MS.gene46948	MS.gene26433	PPI
MS.gene46948	MS.gene007022	PPI
MS.gene46948	MS.gene045614	PPI
MS.gene46948	MS.gene064966	PPI
MS.gene46948	MS.gene69584	PPI
MS.gene46948	MS.gene036423	PPI
MS.gene46948	MS.gene52349	PPI
MS.gene46948	MS.gene021647	PPI
MS.gene46948	MS.gene76420	PPI
MS.gene46948	MS.gene30136	PPI
MS.gene46948	MS.gene46353	PPI
MS.gene46948	MS.gene65471	PPI
MS.gene46948	MS.gene071784	PPI
MS.gene46948	MS.gene060386	PPI
MS.gene94654	MS.gene46948	PPI
MS.gene46948	MS.gene61651	PPI
MS.gene46948	MS.gene29406	PPI
MS.gene46948	MS.gene63762	PPI
MS.gene46948	MS.gene016719	PPI
MS.gene32415	MS.gene46948	PPI
MS.gene46948	MS.gene88393	PPI
MS.gene46948	MS.gene054508	PPI
MS.gene46948	MS.gene053373	PPI
MS.gene46948	MS.gene041264	PPI
MS.gene46948	MS.gene35175	PPI
MS.gene46948	MS.gene63150	PPI
MS.gene30208	MS.gene46948	PPI
MS.gene46948	MS.gene44083	PPI
MS.gene025873	MS.gene46948	PPI
MS.gene46948	MS.gene000629	PPI
MS.gene46948	MS.gene072852	PPI
MS.gene46948	MS.gene65474	PPI
MS.gene05358	MS.gene46948	PPI
MS.gene46948	MS.gene025401	PPI
MS.gene46948	MS.gene57044	PPI
MS.gene46948	MS.gene015093	PPI
MS.gene030090	MS.gene46948	PPI
MS.gene95561	MS.gene46948	PPI
MS.gene46948	MS.gene04134	PPI
MS.gene46948	MS.gene06164	PPI
MS.gene46948	MS.gene50392	PPI
MS.gene46948	MS.gene22730	PPI
MS.gene018196	MS.gene46948	PPI
MS.gene46948	MS.gene032299	PPI
MS.gene46948	MS.gene017586	PPI
MS.gene065627	MS.gene46948	PPI
MS.gene57019	MS.gene46948	PPI
MS.gene46948	MS.gene037634	PPI
MS.gene46948	MS.gene057828	PPI
MS.gene46948	MS.gene071320	PPI
MS.gene46948	MS.gene08606	PPI
MS.gene46948	MS.gene012019	PPI
MS.gene46948	MS.gene048747	PPI
MS.gene46948	MS.gene000640	PPI
MS.gene46948	MS.gene061850	PPI
MS.gene46948	MS.gene09517	PPI
MS.gene46948	MS.gene98756	PPI
MS.gene46948	MS.gene87845	PPI
MS.gene46948	MS.gene85308	PPI
MS.gene46948	MS.gene64130	PPI
MS.gene46948	MS.gene62249	PPI
MS.gene28545	MS.gene46948	PPI
MS.gene46948	MS.gene024522	PPI
MS.gene46948	MS.gene046089	PPI
MS.gene008275	MS.gene46948	PPI
MS.gene46948	MS.gene010290	PPI
MS.gene46948	MS.gene053747	PPI
MS.gene46948	MS.gene92517	PPI
MS.gene46948	MS.gene021555	PPI
MS.gene46948	MS.gene36069	PPI
MS.gene46948	MS.gene71675	PPI
MS.gene46948	MS.gene044729	PPI
MS.gene46948	MS.gene05319	PPI
MS.gene46948	MS.gene60390	PPI
MS.gene46948	MS.gene039692	PPI
MS.gene46948	MS.gene032311	PPI
MS.gene46948	MS.gene55682	PPI
MS.gene46948	MS.gene002590	PPI
MS.gene46948	MS.gene81712	PPI
MS.gene46948	MS.gene008927	PPI
MS.gene036423	MS.gene46948	PPI
MS.gene46948	MS.gene98616	PPI
MS.gene46948	MS.gene23521	PPI
MS.gene46948	MS.gene005120	PPI
MS.gene46948	MS.gene65546	PPI
MS.gene46948	MS.gene024297	PPI
MS.gene46948	MS.gene059269	PPI
MS.gene46948	MS.gene057934	PPI
MS.gene72520	MS.gene46948	PPI
MS.gene46948	MS.gene024841	PPI
MS.gene96109	MS.gene46948	PPI
MS.gene46948	MS.gene069786	PPI
MS.gene46948	MS.gene025158	PPI
MS.gene46948	MS.gene40828	PPI
MS.gene46948	MS.gene87529	PPI
MS.gene46948	MS.gene51799	PPI
MS.gene46948	MS.gene98471	PPI
MS.gene46948	MS.gene062067	PPI
MS.gene46948	MS.gene97410	PPI
MS.gene46948	MS.gene013676	PPI
MS.gene30136	MS.gene46948	PPI
MS.gene46948	MS.gene40469	PPI
MS.gene46948	MS.gene09023	PPI
MS.gene46948	MS.gene66651	PPI
MS.gene46948	MS.gene025987	PPI
MS.gene016102	MS.gene46948	PPI
MS.gene46941	MS.gene46948	PPI
MS.gene96541	MS.gene46948	PPI
MS.gene46948	MS.gene95960	PPI
MS.gene46948	MS.gene043140	PPI
MS.gene46948	MS.gene61452	PPI
MS.gene46948	MS.gene05231	PPI
MS.gene46948	MS.gene03149	PPI
MS.gene46948	MS.gene29321	PPI
MS.gene46948	MS.gene018745	PPI
MS.gene46948	MS.gene037049	PPI
MS.gene93396	MS.gene46948	PPI
MS.gene46948	MS.gene24278	PPI
MS.gene46948	MS.gene000379	PPI
MS.gene46948	MS.gene34618	PPI
MS.gene46948	MS.gene59460	PPI
MS.gene46948	MS.gene060773	PPI
MS.gene46948	MS.gene66650	PPI
MS.gene46948	MS.gene009121	PPI
MS.gene46948	MS.gene08713	PPI
MS.gene46948	MS.gene09589	PPI
MS.gene46948	MS.gene70932	PPI
MS.gene46948	MS.gene024405	PPI
MS.gene56991	MS.gene46948	PPI
MS.gene050679	MS.gene46948	PPI
MS.gene46948	MS.gene021965	PPI
MS.gene46948	MS.gene018196	PPI
MS.gene46948	MS.gene32415	PPI
MS.gene46948	MS.gene24070	PPI
MS.gene46948	MS.gene059736	PPI
MS.gene20246	MS.gene46948	PPI
MS.gene46948	MS.gene58419	PPI
MS.gene46948	MS.gene26844	PPI
MS.gene46948	MS.gene64178	PPI
MS.gene46948	MS.gene074257	PPI
MS.gene46948	MS.gene04749	PPI
MS.gene46948	MS.gene073573	PPI
MS.gene46948	MS.gene44144	PPI
MS.gene46948	MS.gene05576	PPI
MS.gene46948	MS.gene060718	PPI
MS.gene46948	MS.gene63743	PPI
MS.gene46948	MS.gene48477	PPI
MS.gene46948	MS.gene055223	PPI
MS.gene46948	MS.gene027169	PPI
MS.gene46948	MS.gene004417	PPI
MS.gene46948	MS.gene019177	PPI
MS.gene46948	MS.gene031967	PPI
MS.gene46948	MS.gene05436	PPI
MS.gene46948	MS.gene038623	PPI
MS.gene69490	MS.gene46948	PPI
MS.gene015248	MS.gene46948	PPI
MS.gene46948	MS.gene055560	PPI
MS.gene46948	MS.gene009213	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46948.t1	MTR_3g053920	55.908	347	84	5	1	345	1	280	1.42e-116	342
MS.gene46948.t1	MTR_2g061500	82.946	129	22	0	1	129	1	129	6.63e-75	230
MS.gene46948.t1	MTR_4g103530	84.946	93	14	0	55	147	1	93	1.84e-52	174
MS.gene46948.t1	MTR_4g103530	56.250	64	27	1	251	313	119	182	6.24e-13	67.8
MS.gene46948.t1	MTR_7g011710	68.182	88	28	0	55	142	1	88	2.56e-36	131
MS.gene46948.t1	MTR_6g033215	33.333	171	112	1	31	199	124	294	9.11e-32	123
MS.gene46948.t1	MTR_0010s0370	36.364	176	104	4	8	177	4	177	1.23e-30	117
MS.gene46948.t1	MTR_0010s0350	36.364	176	104	4	8	177	4	177	1.23e-30	117
MS.gene46948.t1	MTR_8g463110	57.500	120	48	2	288	406	1	118	5.51e-22	99.0
MS.gene46948.t1	MTR_1g036720	33.945	109	70	1	7	113	3	111	1.56e-14	70.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46948.t1	AT2G17920	26.291	213	149	5	8	215	9	218	1.59e-17	83.2
MS.gene46948.t1	AT2G13450	27.551	196	132	5	27	215	26	218	8.72e-16	79.3
MS.gene46948.t1	AT3G57587	28.369	141	97	2	77	215	80	218	1.47e-15	78.2
MS.gene46948.t1	AT2G41590	28.662	157	102	3	67	215	64	218	1.71e-15	78.2
MS.gene46948.t1	AT5G36228	29.333	150	101	3	69	215	71	218	1.79e-15	77.8
MS.gene46948.t1	AT3G31430	28.646	192	125	7	30	215	126	311	5.67e-15	76.3
MS.gene46948.t1	AT3G47920	28.369	141	97	2	77	215	9	147	7.44e-14	72.4

Find 118 sgRNAs with CRISPR-Local

Find 233 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAAGGTCTAGGAAGCTTTCT+AGG	0.220477	3.2:+37836744	MS.gene46948:CDS
TGTCACTGTCCCTTTGAAAA+AGG	0.255154	3.2:+37836836	MS.gene46948:CDS
CTGATGATGGTGTTCGGAAC+TGG	0.260825	3.2:+37836994	MS.gene46948:CDS
CACCATCAGCAGGATTGTTT+TGG	0.282463	3.2:-37837103	None:intergenic
AACCCGTTTGACTGGCTTCC+AGG	0.282685	3.2:-37836499	None:intergenic
CGACATACGTTCACTGAAAT+AGG	0.296935	3.2:-37836472	None:intergenic
ATCTGGTCAAATGCATTTCC+TGG	0.324399	3.2:+37837283	MS.gene46948:CDS
TCCTAGACCTTGACCTACTT+TGG	0.331729	3.2:-37836733	None:intergenic
CCTAGACCTTGACCTACTTT+GGG	0.343147	3.2:-37836732	None:intergenic
CAAGTACATGGGCTGCCTTT+TGG	0.351190	3.2:+37836699	MS.gene46948:CDS
TCGAGGATGGCCGTAGGTTC+AGG	0.358106	3.2:-37836402	None:intergenic
CTTGTTTCAGTTCCATCATA+AGG	0.363309	3.2:+37836551	MS.gene46948:CDS
TAATTCTATCCATGGCAATA+TGG	0.367244	3.2:-37836623	None:intergenic
GCAGCCAACAGGTGTGAAAT+TGG	0.376585	3.2:-37837378	None:intergenic
CCCTCAAACCTCAACCTTGA+TGG	0.382465	3.2:+37836333	MS.gene46948:CDS
TAGGAATTGATGTTAGTCAT+AGG	0.396977	3.2:+37837519	MS.gene46948:CDS
CCCTGTGGTGCTTGGTCTAC+CGG	0.404074	3.2:+37837352	MS.gene46948:CDS
TGGTGCGGCACAGCAGGGAT+AGG	0.407635	3.2:-37837083	None:intergenic
TCCACATGGAACTCGGTCTC+TGG	0.423080	3.2:+37837314	MS.gene46948:CDS
GCTACTCCATTTGCTGCTGA+TGG	0.423600	3.2:+37837476	MS.gene46948:CDS
GGTATGAGTGCTGGTCTATC+TGG	0.423909	3.2:+37837266	MS.gene46948:CDS
CTACTCCATTTGCTGCTGAT+GGG	0.426270	3.2:+37837477	MS.gene46948:CDS
TCTCCACGCCCTGTGGTGCT+TGG	0.428602	3.2:+37837344	MS.gene46948:CDS
CCATCAAGGTTGAGGTTTGA+GGG	0.429032	3.2:-37836333	None:intergenic
ATCCTCGAAAACTGCTTGAT+TGG	0.431045	3.2:+37836417	MS.gene46948:CDS
GTTCACTGAAATAGGCAAAC+TGG	0.436795	3.2:-37836464	None:intergenic
GCCGGTAGACCAAGCACCAC+AGG	0.441984	3.2:-37837353	None:intergenic
TGATGATGGTGTTCGGAACT+GGG	0.442625	3.2:+37836995	MS.gene46948:CDS
GTGTTCGGAGCTATATGAAC+TGG	0.446579	3.2:+37836968	MS.gene46948:CDS
GCCATCAAGGTTGAGGTTTG+AGG	0.448490	3.2:-37836334	None:intergenic
GTGATCGTAACCCGTTTGAC+TGG	0.449354	3.2:-37836507	None:intergenic
AGGAATTGATGTTAGTCATA+GGG	0.454527	3.2:+37837520	MS.gene46948:CDS
GATATGAGGAATGATGTAAT+AGG	0.457319	3.2:+37837500	MS.gene46948:CDS
CAGGTGCGGTTTCGAGGTTG+AGG	0.459074	3.2:-37836383	None:intergenic
TGTGATTCGTCGCAGCCAAC+AGG	0.459104	3.2:-37837389	None:intergenic
GCAACTCCAGCAGTCGCGTT+AGG	0.469031	3.2:-37837137	None:intergenic
TCCTGGCTTCTTCTTCCACA+TGG	0.470788	3.2:+37837300	MS.gene46948:CDS
GTGAACGTATGTCGCGTGCC+TGG	0.474223	3.2:+37836481	MS.gene46948:CDS
TGTCACAGGTGTGGACTGAT+TGG	0.475493	3.2:+37836930	MS.gene46948:CDS
TTCTTCTTCCACATGGAACT+CGG	0.476413	3.2:+37837307	MS.gene46948:CDS
ACAAAGCTAGGCACGACACC+AGG	0.476615	3.2:-37836648	None:intergenic
TAGGTTCAGGTGCGGTTTCG+AGG	0.480077	3.2:-37836389	None:intergenic
TCCATGTGGAAGAAGAAGCC+AGG	0.480841	3.2:-37837301	None:intergenic
TGCCTGGAAGCCAGTCAAAC+GGG	0.491071	3.2:+37836497	MS.gene46948:CDS
GTACCAACACGTTGAGCAGC+AGG	0.492954	3.2:-37837032	None:intergenic
GGTGCGGCACAGCAGGGATA+GGG	0.495687	3.2:-37837082	None:intergenic
CAAAGGGACAGTGACATCAA+TGG	0.496314	3.2:-37836829	None:intergenic
GCTGCTCCTAACGCGACTGC+TGG	0.496945	3.2:+37837131	MS.gene46948:CDS
AGACCAAGCACCACAGGGCG+TGG	0.499412	3.2:-37837347	None:intergenic
GTTGAGGTTTGAGGGATCCA+TGG	0.500518	3.2:-37836325	None:intergenic
TTGGGTTGAATGAAACCAAA+AGG	0.500604	3.2:-37836714	None:intergenic
TGGCTTGACTTTGTCTGAAG+AGG	0.501031	3.2:+37836353	MS.gene46948:CDS
TCACATGATGACTCTGATGC+TGG	0.502596	3.2:+37837407	MS.gene46948:CDS
ATATCCCCATCAGCAGCAAA+TGG	0.503201	3.2:-37837482	None:intergenic
GTGCCTGGAAGCCAGTCAAA+CGG	0.507895	3.2:+37836496	MS.gene46948:CDS
CAGACAAAGTCAAGCCATCA+AGG	0.513055	3.2:-37836347	None:intergenic
TCATACAGATAAGGTGTGTT+CGG	0.515916	3.2:+37836953	MS.gene46948:CDS
TTGCTGCTGATGGGGATATG+AGG	0.515956	3.2:+37837486	MS.gene46948:CDS
GGTTTCATTCAACCCAAAGT+AGG	0.516836	3.2:+37836720	MS.gene46948:CDS
GGCTTGACTTTGTCTGAAGA+GGG	0.518030	3.2:+37836354	MS.gene46948:CDS
GCAGCAAAGCCACCATCAGC+AGG	0.519762	3.2:-37837113	None:intergenic
TGATTCAGAGGCACAAAGCT+AGG	0.520009	3.2:-37836660	None:intergenic
GCAACACGTGTCCTTGATGA+AGG	0.520257	3.2:+37836579	MS.gene46948:CDS
TGGACTCTGATGATGGTGTT+CGG	0.521790	3.2:+37836988	MS.gene46948:CDS
AAGTCAAGCCATCAAGGTTG+AGG	0.523037	3.2:-37836341	None:intergenic
TCCCAAGTTGTCAGCTTGTG+CGG	0.530536	3.2:+37838448	MS.gene46948:intron
GTGTTGCATCCACCTTATGA+TGG	0.531201	3.2:-37836563	None:intergenic
AGGTGCGGTTTCGAGGTTGA+GGG	0.531473	3.2:-37836382	None:intergenic
TACTCCATTTGCTGCTGATG+GGG	0.534392	3.2:+37837478	MS.gene46948:CDS
GCAAAACAAGGTATGAGTGC+TGG	0.538920	3.2:+37837257	MS.gene46948:CDS
GCTGCCAATTTCACACCTGT+TGG	0.540212	3.2:+37837374	MS.gene46948:CDS
CAAAAGAACCATTACTAGCT+CGG	0.541532	3.2:-37836869	None:intergenic
TGATTGCGGTAAGTTGACTT+TGG	0.543870	3.2:-37837199	None:intergenic
CTGGATCAGAACTGAAGAAG+AGG	0.546499	3.2:+37837426	MS.gene46948:CDS
GGAATTGATGTTAGTCATAG+GGG	0.552511	3.2:+37837521	MS.gene46948:CDS
ATGGAGTAGCACCATTCTGA+AGG	0.554857	3.2:-37837463	None:intergenic
GAAGAAGAGGAAAAGAATGA+AGG	0.555634	3.2:+37837439	MS.gene46948:CDS
TTGAGGTTTGAGGGATCCAT+GGG	0.564403	3.2:-37836324	None:intergenic
AAACCTGCTGCTCAACGTGT+TGG	0.564416	3.2:+37837029	MS.gene46948:CDS
CCCAAAGTAGGTCAAGGTCT+AGG	0.565295	3.2:+37836732	MS.gene46948:CDS
CACCAAAACAATCCTGCTGA+TGG	0.567709	3.2:+37837101	MS.gene46948:CDS
TATGAACTGGACTCTGATGA+TGG	0.569418	3.2:+37836981	MS.gene46948:CDS
ATAACCATGGGCCTTCATCA+AGG	0.573698	3.2:-37836590	None:intergenic
ACCAGGGTTAATTCTATCCA+TGG	0.574236	3.2:-37836631	None:intergenic
AAGGTCTAGGAAGCTTTCTA+GGG	0.575889	3.2:+37836745	MS.gene46948:CDS
GGAAGTTATCATATAACCAT+GGG	0.577714	3.2:-37836602	None:intergenic
ATTCAACCCAAAGTAGGTCA+AGG	0.579948	3.2:+37836726	MS.gene46948:CDS
AGCTTGTGCGGAGGATATGT+CGG	0.585444	3.2:+37838460	MS.gene46948:CDS
CGAAACCGCACCTGAACCTA+CGG	0.586367	3.2:+37836392	MS.gene46948:CDS
AGAATGAAGGCCCTTCAGAA+TGG	0.587277	3.2:+37837452	MS.gene46948:CDS
TGGAAGTTATCATATAACCA+TGG	0.589493	3.2:-37836603	None:intergenic
ACTGATTGGTCATACAGATA+AGG	0.595655	3.2:+37836944	MS.gene46948:CDS
CAAAACAATCCTGCTGATGG+TGG	0.596395	3.2:+37837104	MS.gene46948:CDS
GTACTGCTGCAACTAACCGC+TGG	0.598254	3.2:+37837051	MS.gene46948:CDS
TGATAACTTCCATATTGCCA+TGG	0.602021	3.2:+37836614	MS.gene46948:CDS
TGGCGTGTCCGAGCTAGTAA+TGG	0.603265	3.2:+37836861	MS.gene46948:CDS
TACGATCACAAAATCTGTTG+AGG	0.605542	3.2:+37836521	MS.gene46948:CDS
GTTTCAGTTCCATCATAAGG+TGG	0.609100	3.2:+37836554	MS.gene46948:CDS
ACAGGTGTGAAATTGGCAGC+CGG	0.610215	3.2:-37837371	None:intergenic
GTGCGGAGGATATGTCGGTA+TGG	0.612621	3.2:+37838465	MS.gene46948:CDS
CAAGTTGTCAGCTTGTGCGG+AGG	0.624388	3.2:+37838451	MS.gene46948:intron
GAATTGATGTTAGTCATAGG+GGG	0.633076	3.2:+37837522	MS.gene46948:CDS
AAGCATATCATGTTTGATTG+CGG	0.633966	3.2:-37837213	None:intergenic
ACTGGATTTCTCGATCTGCA+AGG	0.638048	3.2:-37836446	None:intergenic
GACATTCGAACATTAAAACT+CGG	0.644790	3.2:-37837170	None:intergenic
TGGAGTAGCACCATTCTGAA+GGG	0.645130	3.2:-37837462	None:intergenic
CCGGTAGACCAAGCACCACA+GGG	0.648540	3.2:-37837352	None:intergenic
ACCGCTACCAAAGCAAAACA+AGG	0.651311	3.2:+37837245	MS.gene46948:CDS
GGGTCGCTCAAAGCTTATGA+CGG	0.652222	3.2:+37836765	MS.gene46948:CDS
TCTGCTGTCTCCACGCCCTG+TGG	0.652463	3.2:+37837337	MS.gene46948:CDS
GTGTCCTTGATGAAGGCCCA+TGG	0.656413	3.2:+37836586	MS.gene46948:CDS
GATGATGGTGTTCGGAACTG+GGG	0.663892	3.2:+37836996	MS.gene46948:CDS
ACCAGAGACCGAGTTCCATG+TGG	0.676272	3.2:-37837315	None:intergenic
AATTGATGTTAGTCATAGGG+GGG	0.682213	3.2:+37837523	MS.gene46948:CDS
GCCATGGATAGAATTAACCC+TGG	0.684951	3.2:+37836630	MS.gene46948:CDS
GATGGCCGTAGGTTCAGGTG+CGG	0.690072	3.2:-37836397	None:intergenic
GGATAGGGTCTTGAAGCCAG+CGG	0.712214	3.2:-37837067	None:intergenic
CAAAGCTAGGCACGACACCA+GGG	0.726322	3.2:-37836647	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAACTTTAAGTATGAAAAAT+TGG	+	chr3.2:37836899-37836918	MS.gene46948:CDS	15.0%
!!	AACTTTAAGTATGAAAAATT+GGG	+	chr3.2:37836900-37836919	MS.gene46948:CDS	15.0%
!!	AACTTGGGAATAATATTATT+AGG	-	chr3.2:37838437-37838456	None:intergenic	20.0%
!!!	GTAGTTCTTCAATTTTATTT+CGG	-	chr3.2:37837753-37837772	None:intergenic	20.0%
!	AAATGTTGAGCATAATGAAA+TGG	-	chr3.2:37838341-37838360	None:intergenic	25.0%
!	ATAAATTATTTGCAAGAGCA+CGG	-	chr3.2:37838223-37838242	None:intergenic	25.0%
!	ATTTGGAAAACCATAATAAC+CGG	-	chr3.2:37837940-37837959	None:intergenic	25.0%
!	GAAATTATAGATACTGTTCT+TGG	+	chr3.2:37837900-37837919	MS.gene46948:intron	25.0%
!	TTCAACAGTTATATGATTGT+TGG	-	chr3.2:37837883-37837902	None:intergenic	25.0%
!	TTTAAATCAGGAATTGTACT+CGG	-	chr3.2:37837673-37837692	None:intergenic	25.0%
!!	TATTATGGTTTTCCAAATAG+TGG	+	chr3.2:37837942-37837961	MS.gene46948:intron	25.0%
	AAGCATATCATGTTTGATTG+CGG	-	chr3.2:37837216-37837235	None:intergenic	30.0%
	AGGAATTGATGTTAGTCATA+GGG	+	chr3.2:37837520-37837539	MS.gene46948:CDS	30.0%
	GACATTCGAACATTAAAACT+CGG	-	chr3.2:37837173-37837192	None:intergenic	30.0%
	GATATGAGGAATGATGTAAT+AGG	+	chr3.2:37837500-37837519	MS.gene46948:CDS	30.0%
	GGAAGTTATCATATAACCAT+GGG	-	chr3.2:37836605-37836624	None:intergenic	30.0%
	GTATGATGAAAATGCTGTAA+AGG	+	chr3.2:37837577-37837596	MS.gene46948:intron	30.0%
	GTGCTCTTGCAAATAATTTA+TGG	+	chr3.2:37838222-37838241	MS.gene46948:intron	30.0%
	TAATTCTATCCATGGCAATA+TGG	-	chr3.2:37836626-37836645	None:intergenic	30.0%
	TAGGAATTGATGTTAGTCAT+AGG	+	chr3.2:37837519-37837538	MS.gene46948:CDS	30.0%
	TGGAAGTTATCATATAACCA+TGG	-	chr3.2:37836606-37836625	None:intergenic	30.0%
	TTAAATCAGGAATTGTACTC+GGG	-	chr3.2:37837672-37837691	None:intergenic	30.0%
!	ACAGCATTTTCATCATACAA+AGG	-	chr3.2:37837575-37837594	None:intergenic	30.0%
!	ATTTTCGCTATGAAAATGCT+TGG	+	chr3.2:37838357-37838376	MS.gene46948:intron	30.0%
!	CTGATTTAAAATACCTAGTC+CGG	+	chr3.2:37837683-37837702	MS.gene46948:intron	30.0%
!	TAGTAATGGTTCTTTTGTGA+CGG	+	chr3.2:37836875-37836894	MS.gene46948:CDS	30.0%
!	TGAAGAACTACATTTTTGCT+TGG	+	chr3.2:37837762-37837781	MS.gene46948:intron	30.0%
!!	ATGATTTGGTTCACAATTCT+TGG	+	chr3.2:37838399-37838418	MS.gene46948:intron	30.0%
!!!	TCTGAATCACATCGATTTTT+GGG	+	chr3.2:37836674-37836693	MS.gene46948:CDS	30.0%
	AATTGATGTTAGTCATAGGG+GGG	+	chr3.2:37837523-37837542	MS.gene46948:CDS	35.0%
	CAAAAATCGATGTGATTCAG+AGG	-	chr3.2:37836675-37836694	None:intergenic	35.0%
	CAAAAGAACCATTACTAGCT+CGG	-	chr3.2:37836872-37836891	None:intergenic	35.0%
	CCTTGTTGCTAAAGAGAAAA+GGG	+	chr3.2:37838052-37838071	MS.gene46948:intron	35.0%
	CGTCAGATCATTATCCTATA+TGG	+	chr3.2:37838291-37838310	MS.gene46948:intron	35.0%
	CTTGTTGCTAAAGAGAAAAG+GGG	+	chr3.2:37838053-37838072	MS.gene46948:intron	35.0%
	CTTGTTTCAGTTCCATCATA+AGG	+	chr3.2:37836551-37836570	MS.gene46948:CDS	35.0%
	GAAGAAGAGGAAAAGAATGA+AGG	+	chr3.2:37837439-37837458	MS.gene46948:CDS	35.0%
	GAATTGATGTTAGTCATAGG+GGG	+	chr3.2:37837522-37837541	MS.gene46948:CDS	35.0%
	GGAATTGATGTTAGTCATAG+GGG	+	chr3.2:37837521-37837540	MS.gene46948:CDS	35.0%
	TACGATCACAAAATCTGTTG+AGG	+	chr3.2:37836521-37836540	MS.gene46948:CDS	35.0%
	TCACTTAGGAATAGAAGATC+CGG	-	chr3.2:37837718-37837737	None:intergenic	35.0%
	TCATACAGATAAGGTGTGTT+CGG	+	chr3.2:37836953-37836972	MS.gene46948:CDS	35.0%
	TCCTTGTTGCTAAAGAGAAA+AGG	+	chr3.2:37838051-37838070	MS.gene46948:intron	35.0%
	TGAACCAAATCATTAAACCC+CGG	-	chr3.2:37838392-37838411	None:intergenic	35.0%
	TGATAACTTCCATATTGCCA+TGG	+	chr3.2:37836614-37836633	MS.gene46948:CDS	35.0%
	TTGTTGCTAAAGAGAAAAGG+GGG	+	chr3.2:37838054-37838073	MS.gene46948:intron	35.0%
!	ACTGATTGGTCATACAGATA+AGG	+	chr3.2:37836944-37836963	MS.gene46948:CDS	35.0%
!	AGATTTTCCAATGATGCGTT+CGG	-	chr3.2:37838260-37838279	None:intergenic	35.0%
!	CAACTTTCTAATCGTTTTCC+AGG	+	chr3.2:37837996-37838015	MS.gene46948:intron	35.0%
!!	CGGACTAGGTATTTTAAATC+AGG	-	chr3.2:37837685-37837704	None:intergenic	35.0%
!!	TTGGGTTGAATGAAACCAAA+AGG	-	chr3.2:37836717-37836736	None:intergenic	35.0%
!!!	AATTGGGTGTTTTTTGTCAC+AGG	+	chr3.2:37836916-37836935	MS.gene46948:CDS	35.0%
!!!	ACTCATACCTTGTTTTGCTT+TGG	-	chr3.2:37837255-37837274	None:intergenic	35.0%
!!!	ATTTTTGGGTGCAAGTACAT+GGG	+	chr3.2:37836688-37836707	MS.gene46948:CDS	35.0%
!!!	CTCTGAATCACATCGATTTT+TGG	+	chr3.2:37836673-37836692	MS.gene46948:CDS	35.0%
!!!	TTGAGCAGCAGGTTTTAAAT+AGG	-	chr3.2:37837024-37837043	None:intergenic	35.0%
	AAATCTCCCAATATGCACCA+CGG	-	chr3.2:37838023-37838042	None:intergenic	40.0%
	AAATGCTTGGCAGTTAGAAC+CGG	+	chr3.2:37838370-37838389	MS.gene46948:intron	40.0%
	AAGGTCTAGGAAGCTTTCTA+GGG	+	chr3.2:37836745-37836764	MS.gene46948:CDS	40.0%
	ACCAGGGTTAATTCTATCCA+TGG	-	chr3.2:37836634-37836653	None:intergenic	40.0%
	AGAACCGGGGTTTAATGATT+TGG	+	chr3.2:37838385-37838404	MS.gene46948:intron	40.0%
	ATAGGATAATGATCTGACGC+AGG	-	chr3.2:37838290-37838309	None:intergenic	40.0%
	ATCCTCGAAAACTGCTTGAT+TGG	+	chr3.2:37836417-37836436	MS.gene46948:CDS	40.0%
	ATCTGGTCAAATGCATTTCC+TGG	+	chr3.2:37837283-37837302	MS.gene46948:CDS	40.0%
	ATTCAACCCAAAGTAGGTCA+AGG	+	chr3.2:37836726-37836745	MS.gene46948:CDS	40.0%
	CGACATACGTTCACTGAAAT+AGG	-	chr3.2:37836475-37836494	None:intergenic	40.0%
	GATGAAAATGCTGTAAAGGC+AGG	+	chr3.2:37837581-37837600	MS.gene46948:intron	40.0%
	GCTACTAGACTCATTTACCT+AGG	-	chr3.2:37837625-37837644	None:intergenic	40.0%
	GGTAAATGAGTCTAGTAGCA+TGG	+	chr3.2:37837626-37837645	MS.gene46948:intron	40.0%
	GGTTTCATTCAACCCAAAGT+AGG	+	chr3.2:37836720-37836739	MS.gene46948:CDS	40.0%
	GTCTAGTAGCATGGAATTGT+CGG	+	chr3.2:37837635-37837654	MS.gene46948:intron	40.0%
	GTTCACTGAAATAGGCAAAC+TGG	-	chr3.2:37836467-37836486	None:intergenic	40.0%
	GTTTCAGTTCCATCATAAGG+TGG	+	chr3.2:37836554-37836573	MS.gene46948:CDS	40.0%
	TAATAACCGGTAACTCTCCA+AGG	-	chr3.2:37837927-37837946	None:intergenic	40.0%
	TAGATACTGTTCTTGGTCCT+TGG	+	chr3.2:37837907-37837926	MS.gene46948:intron	40.0%
	TATGAACTGGACTCTGATGA+TGG	+	chr3.2:37836981-37837000	MS.gene46948:CDS	40.0%
	TATGTTTCCGAACGCATCAT+TGG	+	chr3.2:37838250-37838269	MS.gene46948:intron	40.0%
	TCTAGTAGCATGGAATTGTC+GGG	+	chr3.2:37837636-37837655	MS.gene46948:intron	40.0%
	TTCTTCTTCCACATGGAACT+CGG	+	chr3.2:37837307-37837326	MS.gene46948:CDS	40.0%
!	CCCTTTTCTCTTTAGCAACA+AGG	-	chr3.2:37838055-37838074	None:intergenic	40.0%
!	CTGTCCCTTTGAAAAAGGAA+TGG	+	chr3.2:37836841-37836860	MS.gene46948:CDS	40.0%
!	TGATTGCGGTAAGTTGACTT+TGG	-	chr3.2:37837202-37837221	None:intergenic	40.0%
!	TGGAGAGTTACCGGTTATTA+TGG	+	chr3.2:37837927-37837946	MS.gene46948:intron	40.0%
!	TGTCACTGTCCCTTTGAAAA+AGG	+	chr3.2:37836836-37836855	MS.gene46948:CDS	40.0%
!	TTTGGTTCACAATTCTTGGC+AGG	+	chr3.2:37838403-37838422	MS.gene46948:intron	40.0%
!!	AATCAAGCAGTTTTCGAGGA+TGG	-	chr3.2:37836418-37836437	None:intergenic	40.0%
!!	TGAGAGCATTGCAACCATAT+AGG	-	chr3.2:37838308-37838327	None:intergenic	40.0%
!!!	ACACGCCATTCCTTTTTCAA+AGG	-	chr3.2:37836849-37836868	None:intergenic	40.0%
!!!	ACCTTGTTTTGCTTTGGTAG+CGG	-	chr3.2:37837249-37837268	None:intergenic	40.0%
!!!	CACGCCATTCCTTTTTCAAA+GGG	-	chr3.2:37836848-37836867	None:intergenic	40.0%
!!!	GATTTTTGGGTGCAAGTACA+TGG	+	chr3.2:37836687-37836706	MS.gene46948:CDS	40.0%
	AACCTTTCTTCAACAGCACG+TGG	-	chr3.2:37838197-37838216	None:intergenic	45.0%
	AAGGCTCTTGAACCAGGTAA+AGG	-	chr3.2:37838168-37838187	None:intergenic	45.0%
	AAGTCAAGCCATCAAGGTTG+AGG	-	chr3.2:37836344-37836363	None:intergenic	45.0%
	AATGCTTGGCAGTTAGAACC+GGG	+	chr3.2:37838371-37838390	MS.gene46948:intron	45.0%
	ACCGCTACCAAAGCAAAACA+AGG	+	chr3.2:37837245-37837264	MS.gene46948:CDS	45.0%
	ACTGGATTTCTCGATCTGCA+AGG	-	chr3.2:37836449-37836468	None:intergenic	45.0%
	AGAATGAAGGCCCTTCAGAA+TGG	+	chr3.2:37837452-37837471	MS.gene46948:CDS	45.0%
	AGGCTCTTGAACCAGGTAAA+GGG	-	chr3.2:37838167-37838186	None:intergenic	45.0%
	AGGTCTCTGTGGCTCATTAA+TGG	+	chr3.2:37838086-37838105	MS.gene46948:intron	45.0%
	ATAACCATGGGCCTTCATCA+AGG	-	chr3.2:37836593-37836612	None:intergenic	45.0%
	ATATCCCCATCAGCAGCAAA+TGG	-	chr3.2:37837485-37837504	None:intergenic	45.0%
	ATGGAGTAGCACCATTCTGA+AGG	-	chr3.2:37837466-37837485	None:intergenic	45.0%
	CAAAACAATCCTGCTGATGG+TGG	+	chr3.2:37837104-37837123	MS.gene46948:CDS	45.0%
	CAAAGGGACAGTGACATCAA+TGG	-	chr3.2:37836832-37836851	None:intergenic	45.0%
	CAAGGTCTAGGAAGCTTTCT+AGG	+	chr3.2:37836744-37836763	MS.gene46948:CDS	45.0%
	CACCAAAACAATCCTGCTGA+TGG	+	chr3.2:37837101-37837120	MS.gene46948:CDS	45.0%
	CAGACAAAGTCAAGCCATCA+AGG	-	chr3.2:37836350-37836369	None:intergenic	45.0%
	CCATCAAGGTTGAGGTTTGA+GGG	-	chr3.2:37836336-37836355	None:intergenic	45.0%
	CCTAGACCTTGACCTACTTT+GGG	-	chr3.2:37836735-37836754	None:intergenic	45.0%
	CTAGACTCATTTACCTAGGC+AGG	-	chr3.2:37837621-37837640	None:intergenic	45.0%
	CTAGTAGCATGGAATTGTCG+GGG	+	chr3.2:37837637-37837656	MS.gene46948:intron	45.0%
	CTGGATCAGAACTGAAGAAG+AGG	+	chr3.2:37837426-37837445	MS.gene46948:CDS	45.0%
	GCAAAACAAGGTATGAGTGC+TGG	+	chr3.2:37837257-37837276	MS.gene46948:CDS	45.0%
	GCCATGGATAGAATTAACCC+TGG	+	chr3.2:37836630-37836649	MS.gene46948:CDS	45.0%
	GCTCATTAATGGCTTTCGTC+GGG	+	chr3.2:37838097-37838116	MS.gene46948:intron	45.0%
	GGCTCATTAATGGCTTTCGT+CGG	+	chr3.2:37838096-37838115	MS.gene46948:intron	45.0%
	GGCTTGACTTTGTCTGAAGA+GGG	+	chr3.2:37836354-37836373	MS.gene46948:CDS	45.0%
	GTAAAGGGATACCCTTCGAA+AGG	-	chr3.2:37838152-37838171	None:intergenic	45.0%
	GTGTTCGGAGCTATATGAAC+TGG	+	chr3.2:37836968-37836987	MS.gene46948:CDS	45.0%
	GTGTTGCATCCACCTTATGA+TGG	-	chr3.2:37836566-37836585	None:intergenic	45.0%
	TCACATGATGACTCTGATGC+TGG	+	chr3.2:37837407-37837426	MS.gene46948:CDS	45.0%
	TCCTAGACCTTGACCTACTT+TGG	-	chr3.2:37836736-37836755	None:intergenic	45.0%
	TGAGCATAATGAAATGGCCG+AGG	-	chr3.2:37838335-37838354	None:intergenic	45.0%
	TGCAATGCTCTCATAAGCCT+CGG	+	chr3.2:37838315-37838334	MS.gene46948:intron	45.0%
	TGGAGTAGCACCATTCTGAA+GGG	-	chr3.2:37837465-37837484	None:intergenic	45.0%
	TGGCTTGACTTTGTCTGAAG+AGG	+	chr3.2:37836353-37836372	MS.gene46948:CDS	45.0%
	TGTCTGACGTACCTTTCGAA+GGG	+	chr3.2:37838138-37838157	MS.gene46948:intron	45.0%
	TTGTCTGACGTACCTTTCGA+AGG	+	chr3.2:37838137-37838156	MS.gene46948:intron	45.0%
	TTTACCTGGTTCAAGAGCCT+TGG	+	chr3.2:37838167-37838186	MS.gene46948:intron	45.0%
!	CACCATCAGCAGGATTGTTT+TGG	-	chr3.2:37837106-37837125	None:intergenic	45.0%
!	CTACTCCATTTGCTGCTGAT+GGG	+	chr3.2:37837477-37837496	MS.gene46948:CDS	45.0%
!	GAAAGGTACGTCAGACAAAC+CGG	-	chr3.2:37838135-37838154	None:intergenic	45.0%
!	GACCAATCAAGCAGTTTTCG+AGG	-	chr3.2:37836422-37836441	None:intergenic	45.0%
!	TACTCCATTTGCTGCTGATG+GGG	+	chr3.2:37837478-37837497	MS.gene46948:CDS	45.0%
!	TGATTCAGAGGCACAAAGCT+AGG	-	chr3.2:37836663-37836682	None:intergenic	45.0%
!!	TGATGATGGTGTTCGGAACT+GGG	+	chr3.2:37836995-37837014	MS.gene46948:CDS	45.0%
!!	TGGACTCTGATGATGGTGTT+CGG	+	chr3.2:37836988-37837007	MS.gene46948:CDS	45.0%
!!!	GGTGTTTTTTGTCACAGGTG+TGG	+	chr3.2:37836921-37836940	MS.gene46948:CDS	45.0%
!!!	TCAGCAGGATTGTTTTGGTG+CGG	-	chr3.2:37837101-37837120	None:intergenic	45.0%
	AAACCTGCTGCTCAACGTGT+TGG	+	chr3.2:37837029-37837048	MS.gene46948:CDS	50.0%
	ACAGGTGTGAAATTGGCAGC+CGG	-	chr3.2:37837374-37837393	None:intergenic	50.0%
	AGCTTGTGCGGAGGATATGT+CGG	+	chr3.2:37838460-37838479	MS.gene46948:CDS	50.0%
	ATGCTTGGCAGTTAGAACCG+GGG	+	chr3.2:37838372-37838391	MS.gene46948:intron	50.0%
	CCCAAAGTAGGTCAAGGTCT+AGG	+	chr3.2:37836732-37836751	MS.gene46948:CDS	50.0%
	CCCTCAAACCTCAACCTTGA+TGG	+	chr3.2:37836333-37836352	MS.gene46948:CDS	50.0%
	CTTGGTCCTTGGAGAGTTAC+CGG	+	chr3.2:37837918-37837937	MS.gene46948:intron	50.0%
	GAAGATCCGGATTGAAGTGC+CGG	-	chr3.2:37837705-37837724	None:intergenic	50.0%
	GCAACACGTGTCCTTGATGA+AGG	+	chr3.2:37836579-37836598	MS.gene46948:CDS	50.0%
	GCAGCCAACAGGTGTGAAAT+TGG	-	chr3.2:37837381-37837400	None:intergenic	50.0%
	GCAGTTCGACGACCACTATT+TGG	-	chr3.2:37837957-37837976	None:intergenic	50.0%
	GCCATCAAGGTTGAGGTTTG+AGG	-	chr3.2:37836337-37836356	None:intergenic	50.0%
	GCTGCCAATTTCACACCTGT+TGG	+	chr3.2:37837374-37837393	MS.gene46948:CDS	50.0%
	GGGTCGCTCAAAGCTTATGA+CGG	+	chr3.2:37836765-37836784	MS.gene46948:CDS	50.0%
	GTGATCGTAACCCGTTTGAC+TGG	-	chr3.2:37836510-37836529	None:intergenic	50.0%
	TCCATGTGGAAGAAGAAGCC+AGG	-	chr3.2:37837304-37837323	None:intergenic	50.0%
	TCCCAAGTTGTCAGCTTGTG+CGG	+	chr3.2:37838448-37838467	MS.gene46948:intron	50.0%
	TCCGCACAAGCTGACAACTT+GGG	-	chr3.2:37838452-37838471	None:intergenic	50.0%
	TCCTGGCTTCTTCTTCCACA+TGG	+	chr3.2:37837300-37837319	MS.gene46948:CDS	50.0%
	TGTGTCAATGTAGACCGCAC+CGG	+	chr3.2:37837795-37837814	MS.gene46948:intron	50.0%
	TTGCTGCTGATGGGGATATG+AGG	+	chr3.2:37837486-37837505	MS.gene46948:CDS	50.0%
!	AGAAAAGGGGGCGCAACATA+AGG	+	chr3.2:37838066-37838085	MS.gene46948:intron	50.0%
!	CACCACGTGCTGTTGAAGAA+AGG	+	chr3.2:37838192-37838211	MS.gene46948:intron	50.0%
!	CTAATCGTTTTCCAGGTCCG+TGG	+	chr3.2:37838003-37838022	MS.gene46948:intron	50.0%
!	GATGATGGTGTTCGGAACTG+GGG	+	chr3.2:37836996-37837015	MS.gene46948:CDS	50.0%
!	GCTACTCCATTTGCTGCTGA+TGG	+	chr3.2:37837476-37837495	MS.gene46948:CDS	50.0%
!	TGTCACAGGTGTGGACTGAT+TGG	+	chr3.2:37836930-37836949	MS.gene46948:CDS	50.0%
!!	CAAGTACATGGGCTGCCTTT+TGG	+	chr3.2:37836699-37836718	MS.gene46948:CDS	50.0%
!!	CTGATGATGGTGTTCGGAAC+TGG	+	chr3.2:37836994-37837013	MS.gene46948:CDS	50.0%
!!	GGTATGAGTGCTGGTCTATC+TGG	+	chr3.2:37837266-37837285	MS.gene46948:CDS	50.0%
!!	TCGAAGGGTATCCCTTTACC+TGG	+	chr3.2:37838153-37838172	MS.gene46948:intron	50.0%
!!!	GCGGGGGTCTTGCTTTATTT+TGG	+	chr3.2:37837823-37837842	MS.gene46948:intron	50.0%
!!!	GTTTTGCTTTGGTAGCGGTC+TGG	-	chr3.2:37837244-37837263	None:intergenic	50.0%
	AAAGGCAGGCCCTGATGATC+AGG	+	chr3.2:37837595-37837614	MS.gene46948:intron	55.0%
	ACAAAGCTAGGCACGACACC+AGG	-	chr3.2:37836651-37836670	None:intergenic	55.0%
	ACCAGAGACCGAGTTCCATG+TGG	-	chr3.2:37837318-37837337	None:intergenic	55.0%
	AGGTGCGGTTTCGAGGTTGA+GGG	-	chr3.2:37836385-37836404	None:intergenic	55.0%
	CAAAGCTAGGCACGACACCA+GGG	-	chr3.2:37836650-37836669	None:intergenic	55.0%
	CAAGTTGTCAGCTTGTGCGG+AGG	+	chr3.2:37838451-37838470	MS.gene46948:intron	55.0%
	CCAGGTCCGTGGTGCATATT+GGG	+	chr3.2:37838014-37838033	MS.gene46948:intron	55.0%
	CCTAGTCCGGCACTTCAATC+CGG	+	chr3.2:37837696-37837715	MS.gene46948:intron	55.0%
	CGAAACCGCACCTGAACCTA+CGG	+	chr3.2:37836392-37836411	MS.gene46948:CDS	55.0%
	CGTCGGGCAGTTCTTGATTC+CGG	+	chr3.2:37838113-37838132	MS.gene46948:intron	55.0%
	CTAGGCAGGCCTGATCATCA+GGG	-	chr3.2:37837607-37837626	None:intergenic	55.0%
	CTCCGCACAAGCTGACAACT+TGG	-	chr3.2:37838453-37838472	None:intergenic	55.0%
	GCATGGAATTGTCGGGGTGT+AGG	+	chr3.2:37837643-37837662	MS.gene46948:intron	55.0%
	GGATAGGGTCTTGAAGCCAG+CGG	-	chr3.2:37837070-37837089	None:intergenic	55.0%
	GGCGCAACATAAGGTCTCTG+TGG	+	chr3.2:37838075-37838094	MS.gene46948:intron	55.0%
	GGTGAGCAAGCGTCTCACTT+AGG	-	chr3.2:37837732-37837751	None:intergenic	55.0%
	GTACCAACACGTTGAGCAGC+AGG	-	chr3.2:37837035-37837054	None:intergenic	55.0%
	GTACTGCTGCAACTAACCGC+TGG	+	chr3.2:37837051-37837070	MS.gene46948:CDS	55.0%
	GTGCCTGGAAGCCAGTCAAA+CGG	+	chr3.2:37836496-37836515	MS.gene46948:CDS	55.0%
	GTGCGGAGGATATGTCGGTA+TGG	+	chr3.2:37838465-37838484	MS.gene46948:CDS	55.0%
	GTGTCCTTGATGAAGGCCCA+TGG	+	chr3.2:37836586-37836605	MS.gene46948:CDS	55.0%
	TAGGTTCAGGTGCGGTTTCG+AGG	-	chr3.2:37836392-37836411	None:intergenic	55.0%
	TCCACATGGAACTCGGTCTC+TGG	+	chr3.2:37837314-37837333	MS.gene46948:CDS	55.0%
	TCCAGGTCCGTGGTGCATAT+TGG	+	chr3.2:37838013-37838032	MS.gene46948:intron	55.0%
	TGCCTGGAAGCCAGTCAAAC+GGG	+	chr3.2:37836497-37836516	MS.gene46948:CDS	55.0%
	TGGCGTGTCCGAGCTAGTAA+TGG	+	chr3.2:37836861-37836880	MS.gene46948:CDS	55.0%
	TGTGATTCGTCGCAGCCAAC+AGG	-	chr3.2:37837392-37837411	None:intergenic	55.0%
	TGTGCCAAGGCTCTTGAACC+AGG	-	chr3.2:37838174-37838193	None:intergenic	55.0%
!	AATGTAGACCGCACCGGTAG+AGG	+	chr3.2:37837801-37837820	MS.gene46948:intron	55.0%
!!	AACCCGTTTGACTGGCTTCC+AGG	-	chr3.2:37836502-37836521	None:intergenic	55.0%
!!	CAGTTTTCGAGGATGGCCGT+AGG	-	chr3.2:37836411-37836430	None:intergenic	55.0%
!!!	TGTTTTGGTGCGGCACAGCA+GGG	-	chr3.2:37837091-37837110	None:intergenic	55.0%
!!!	TTGTTTTGGTGCGGCACAGC+AGG	-	chr3.2:37837092-37837111	None:intergenic	55.0%
	CAACAGCACGTGGTGTGCCA+AGG	-	chr3.2:37838187-37838206	None:intergenic	60.0%
	CAGGTGCGGTTTCGAGGTTG+AGG	-	chr3.2:37836386-37836405	None:intergenic	60.0%
	CCCAATATGCACCACGGACC+TGG	-	chr3.2:37838017-37838036	None:intergenic	60.0%
	CCCTGTGGTGCTTGGTCTAC+CGG	+	chr3.2:37837352-37837371	MS.gene46948:CDS	60.0%
	CCGGTAGACCAAGCACCACA+GGG	-	chr3.2:37837355-37837374	None:intergenic	60.0%
	CCTAGGCAGGCCTGATCATC+AGG	-	chr3.2:37837608-37837627	None:intergenic	60.0%
	CCTGATGATCAGGCCTGCCT+AGG	+	chr3.2:37837605-37837624	MS.gene46948:intron	60.0%
	GATGGCCGTAGGTTCAGGTG+CGG	-	chr3.2:37836400-37836419	None:intergenic	60.0%
	GCAACTCCAGCAGTCGCGTT+AGG	-	chr3.2:37837140-37837159	None:intergenic	60.0%
	GCAGCAAAGCCACCATCAGC+AGG	-	chr3.2:37837116-37837135	None:intergenic	60.0%
	GTGAACGTATGTCGCGTGCC+TGG	+	chr3.2:37836481-37836500	MS.gene46948:CDS	60.0%
	GTGGTCGTCGAACTGCTGCT+TGG	+	chr3.2:37837961-37837980	MS.gene46948:intron	60.0%
	TCGAGGATGGCCGTAGGTTC+AGG	-	chr3.2:37836405-37836424	None:intergenic	60.0%
!!	CCGGATTGAAGTGCCGGACT+AGG	-	chr3.2:37837699-37837718	None:intergenic	60.0%
	AGACCAAGCACCACAGGGCG+TGG	-	chr3.2:37837350-37837369	None:intergenic	65.0%
	AGCAAGACCCCCGCCTCTAC+CGG	-	chr3.2:37837817-37837836	None:intergenic	65.0%
	GCCGGTAGACCAAGCACCAC+AGG	-	chr3.2:37837356-37837375	None:intergenic	65.0%
	GCTGCTCCTAACGCGACTGC+TGG	+	chr3.2:37837131-37837150	MS.gene46948:CDS	65.0%
	GGTGCGGCACAGCAGGGATA+GGG	-	chr3.2:37837085-37837104	None:intergenic	65.0%
	TCTCCACGCCCTGTGGTGCT+TGG	+	chr3.2:37837344-37837363	MS.gene46948:CDS	65.0%
	TCTGCTGTCTCCACGCCCTG+TGG	+	chr3.2:37837337-37837356	MS.gene46948:CDS	65.0%
	TGGTGCGGCACAGCAGGGAT+AGG	-	chr3.2:37837086-37837105	None:intergenic	65.0%
!	GTAGACCGCACCGGTAGAGG+CGG	+	chr3.2:37837804-37837823	MS.gene46948:intron	65.0%
!	TAGACCGCACCGGTAGAGGC+GGG	+	chr3.2:37837805-37837824	MS.gene46948:intron	65.0%
!	AGACCGCACCGGTAGAGGCG+GGG	+	chr3.2:37837806-37837825	MS.gene46948:intron	70.0%
	GACCCCCGCCTCTACCGGTG+CGG	-	chr3.2:37837812-37837831	None:intergenic	75.0%
!	GACCGCACCGGTAGAGGCGG+GGG	+	chr3.2:37837807-37837826	MS.gene46948:intron	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.2	gene	37836327	37838512	37836327	ID=MS.gene46948
chr3.2	mRNA	37836327	37838512	37836327	ID=MS.gene46948.t1;Parent=MS.gene46948
chr3.2	exon	37836327	37837576	37836327	ID=MS.gene46948.t1.exon1;Parent=MS.gene46948.t1
chr3.2	CDS	37836327	37837576	37836327	ID=cds.MS.gene46948.t1;Parent=MS.gene46948.t1
chr3.2	exon	37838455	37838512	37838455	ID=MS.gene46948.t1.exon2;Parent=MS.gene46948.t1
chr3.2	CDS	37838455	37838512	37838455	ID=cds.MS.gene46948.t1;Parent=MS.gene46948.t1

Gene Sequence

>MS.gene46948

ATGGATCCCTCAAACCTCAACCTTGATGGCTTGACTTTGTCTGAAGAGGGTCTAACCCTCAACCTCGAAACCGCACCTGAACCTACGGCCATCCTCGAAAACTGCTTGATTGGTCGCGTCCTTGCAGATCGAGAAATCCAGTTTGCCTATTTCAGTGAACGTATGTCGCGTGCCTGGAAGCCAGTCAAACGGGTTACGATCACAAAATCTGTTGAGGATCGTTTCTTGTTTCAGTTCCATCATAAGGTGGATGCAACACGTGTCCTTGATGAAGGCCCATGGTTATATGATAACTTCCATATTGCCATGGATAGAATTAACCCTGGTGTCGTGCCTAGCTTTGTGCCTCTGAATCACATCGATTTTTGGGTGCAAGTACATGGGCTGCCTTTTGGTTTCATTCAACCCAAAGTAGGTCAAGGTCTAGGAAGCTTTCTAGGGTCGCTCAAAGCTTATGACGGTCGAAACACAATTCATAGCGCTTATATGCGCATCAAAGTTGCCATTGATGTCACTGTCCCTTTGAAAAAGGAATGGCGTGTCCGAGCTAGTAATGGTTCTTTTGTGACGGTAAACTTTAAGTATGAAAAATTGGGTGTTTTTTGTCACAGGTGTGGACTGATTGGTCATACAGATAAGGTGTGTTCGGAGCTATATGAACTGGACTCTGATGATGGTGTTCGGAACTGGGGTGCCTATTTAAAACCTGCTGCTCAACGTGTTGGTACTGCTGCAACTAACCGCTGGCTTCAAGACCCTATCCCTGCTGTGCCGCACCAAAACAATCCTGCTGATGGTGGCTTTGCTGCTCCTAACGCGACTGCTGGAGTTGCAGACACTGTGCCGAGTTTTAATGTTCGAATGTCTGCTGTCCAAAGTCAACTTACCGCAATCAAACATGATATGCTTGCTGTCCAGACCGCTACCAAAGCAAAACAAGGTATGAGTGCTGGTCTATCTGGTCAAATGCATTTCCTGGCTTCTTCTTCCACATGGAACTCGGTCTCTGGTCTGCTGTCTCCACGCCCTGTGGTGCTTGGTCTACCGGCTGCCAATTTCACACCTGTTGGCTGCGACGAATCACATGATGACTCTGATGCTGGATCAGAACTGAAGAAGAGGAAAAGAATGAAGGCCCTTCAGAATGGTGCTACTCCATTTGCTGCTGATGGGGATATGAGGAATGATGTAATAGGAATTGATGTTAGTCATAGGGGGGACTTAGATATGAATGTAGTTGCTAATCCTTTGTATGATGAAAATGCTGTAAAGGCAGGCCCTGATGATCAGGCCTGCCTAGGTAAATGAGTCTAGTAGCATGGAATTGTCGGGGTGTAGGTAGCCCGAGTACAATTCCTGATTTAAAATACCTAGTCCGGCACTTCAATCCGGATCTTCTATTCCTAAGTGAGACGCTTGCTCACCGAAATAAAATTGAAGAACTACATTTTTGCTTGGTTACGATTCTTGTGTCAATGTAGACCGCACCGGTAGAGGCGGGGGTCTTGCTTTATTTTGGAGAAATTCTTTTAATTGTCAACTTATCGATTTTTCCAACAATCATATAACTGTTGAAATTATAGATACTGTTCTTGGTCCTTGGAGAGTTACCGGTTATTATGGTTTTCCAAATAGTGGTCGTCGAACTGCTGCTTGGAACTTTCTTCGTCAACTTTCTAATCGTTTTCCAGGTCCGTGGTGCATATTGGGAGATTTTTACGACATCCTTGTTGCTAAAGAGAAAAGGGGGCGCAACATAAGGTCTCTGTGGCTCATTAATGGCTTTCGTCGGGCAGTTCTTGATTCCGGTTTGTCTGACGTACCTTTCGAAGGGTATCCCTTTACCTGGTTCAAGAGCCTTGGCACACCACGTGCTGTTGAAGAAAGGTTAGACCGTGCTCTTGCAAATAATTTATGGTTTACTATGTTTCCGAACGCATCATTGGAAAATCTTGTAGCACCTGCGTCAGATCATTATCCTATATGGTTGCAATGCTCTCATAAGCCTCGGCCATTTCATTATGCTCAACATTTTCGCTATGAAAATGCTTGGCAGTTAGAACCGGGGTTTAATGATTTGGTTCACAATTCTTGGCAGGTTCACTCTCCTAATAATATTATTCCCAAGTTGTCAGCTTGTGCGGAGGATATGTCGGTATGGAAAAAATCTCATTGTCATAATCTAA

Protein sequence

>MS.gene46948.t1

MDPSNLNLDGLTLSEEGLTLNLETAPEPTAILENCLIGRVLADREIQFAYFSERMSRAWKPVKRVTITKSVEDRFLFQFHHKVDATRVLDEGPWLYDNFHIAMDRINPGVVPSFVPLNHIDFWVQVHGLPFGFIQPKVGQGLGSFLGSLKAYDGRNTIHSAYMRIKVAIDVTVPLKKEWRVRASNGSFVTVNFKYEKLGVFCHRCGLIGHTDKVCSELYELDSDDGVRNWGAYLKPAAQRVGTAATNRWLQDPIPAVPHQNNPADGGFAAPNATAGVADTVPSFNVRMSAVQSQLTAIKHDMLAVQTATKAKQGMSAGLSGQMHFLASSSTWNSVSGLLSPRPVVLGLPAANFTPVGCDESHDDSDAGSELKKRKRMKALQNGATPFAADGDMRNDVIGIDVSHRGDLDMNVVANPFCQLVRRICRYGKNLIVII