AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene24070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24070.t1 MTR_3g053920 58.453 349 76 4 1 349 1 280 5.86e-127 372
MS.gene24070.t1 MTR_2g061500 83.721 129 21 0 1 129 1 129 6.06e-74 231
MS.gene24070.t1 MTR_8g463110 66.412 131 44 0 403 533 194 324 1.03e-53 192
MS.gene24070.t1 MTR_8g463110 61.404 114 42 1 292 403 1 114 5.82e-27 115
MS.gene24070.t1 MTR_4g103530 81.053 95 18 0 55 149 1 95 1.81e-50 172
MS.gene24070.t1 MTR_4g020630 47.368 190 85 4 346 533 84 260 1.98e-46 170
MS.gene24070.t1 MTR_6g034215 56.349 126 55 0 404 529 199 324 1.82e-44 160
MS.gene24070.t1 MTR_7g011710 70.588 85 25 0 55 139 1 85 6.19e-37 134
MS.gene24070.t1 MTR_6g033215 34.503 171 110 1 31 199 124 294 5.38e-32 125
MS.gene24070.t1 MTR_0010s0370 36.313 179 102 4 7 177 3 177 2.19e-30 117
MS.gene24070.t1 MTR_0010s0350 36.313 179 102 4 7 177 3 177 2.19e-30 117
MS.gene24070.t1 MTR_3g044860 42.149 121 44 1 404 524 87 181 1.83e-26 109
MS.gene24070.t1 MTR_1g100687 41.414 99 58 0 404 502 133 231 3.02e-23 99.0
MS.gene24070.t1 MTR_7g063500 50.769 65 32 0 469 533 38 102 1.70e-17 79.3
MS.gene24070.t1 MTR_0042s0130 35.052 97 63 0 404 500 234 330 6.67e-15 76.6
MS.gene24070.t1 MTR_1g051330 31.667 120 81 1 403 522 349 467 8.69e-14 74.7
MS.gene24070.t1 MTR_1g036720 33.028 109 71 1 7 113 3 111 2.46e-13 67.0
MS.gene24070.t1 MTR_6g009010 43.284 67 38 0 399 465 197 263 3.16e-13 70.5
MS.gene24070.t1 MTR_7g056813 50.769 65 30 1 469 533 8 70 3.30e-13 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24070.t1 AT2G17920 27.103 214 148 5 8 216 9 219 1.04e-18 87.4
MS.gene24070.t1 AT3G57587 30.282 142 95 2 77 216 80 219 1.16e-16 82.0
MS.gene24070.t1 AT2G41590 29.189 185 123 4 36 216 39 219 1.30e-16 82.0
MS.gene24070.t1 AT3G31430 28.230 209 142 4 11 215 107 311 5.49e-16 79.7
MS.gene24070.t1 AT2G13450 28.571 196 130 5 27 215 26 218 7.35e-16 80.1
MS.gene24070.t1 AT5G36228 27.468 233 125 5 8 227 32 233 1.55e-15 78.6
MS.gene24070.t1 AT5G25200 27.513 189 121 4 36 216 39 219 1.41e-14 75.9
MS.gene24070.t1 AT3G47920 30.282 142 95 2 77 216 9 148 1.47e-14 75.1
MS.gene24070.t1 AT5G18636 27.513 189 121 4 36 216 39 219 1.64e-14 75.5
MS.gene24070.t1 AT2G02103 28.042 189 120 4 36 216 39 219 1.81e-14 75.9
MS.gene24070.t1 AT4G02000 28.676 136 93 2 83 216 6 139 7.03e-13 70.1

Find 144 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATTGTAATAAAATAAAA+AGG 0.199288 1.4:-54901948 MS.gene24070:CDS
TCCGCACATAAGGATAATTT+TGG 0.231750 1.4:+54901994 None:intergenic
CAGACTCGGTTTCAAGGTTT+AGG 0.239735 1.4:+54904064 None:intergenic
GCAACTTGAACCGGGGTTTA+AGG 0.249027 1.4:-54902064 MS.gene24070:CDS
CTGATGATGGTGTTAGAAAT+TGG 0.263857 1.4:-54903453 MS.gene24070:CDS
ATTTGCTGCTGATGGGGATA+TGG 0.268644 1.4:-54902960 MS.gene24070:CDS
TCCTATCCCTTGACCTACTT+TGG 0.306186 1.4:+54903714 None:intergenic
CGCCACCAGCAGCATTGGTT+TGG 0.311726 1.4:+54903341 None:intergenic
GACATTCGGTTGCATGTTAC+CGG 0.315967 1.4:-54901895 MS.gene24070:CDS
CGACATGCGTTCGCTGAAAT+AGG 0.325418 1.4:+54903975 None:intergenic
GATATGGGAAACAATGTAAT+AGG 0.328449 1.4:-54902944 MS.gene24070:CDS
TGCTTGCAAAGTGCAGCTTC+TGG 0.331973 1.4:-54903152 MS.gene24070:CDS
CAAGTCCATGGTCTTCCATT+TGG 0.332640 1.4:-54903748 MS.gene24070:CDS
AGACTCGGTTTCAAGGTTTA+GGG 0.335047 1.4:+54904065 None:intergenic
CCTATCCCTTGACCTACTTT+GGG 0.336493 1.4:+54903715 None:intergenic
GTGATTCAAGGACACAAAAC+TGG 0.340541 1.4:+54903786 None:intergenic
TCATAGCAGTGAGTTGGTTC+TGG 0.357299 1.4:+54903236 None:intergenic
CCCACAAATCTTAACCTTGC+TGG 0.383915 1.4:-54904114 MS.gene24070:CDS
TGGCCCAAGATGATGCTTAT+TGG 0.388674 1.4:-54901822 MS.gene24070:CDS
TGTCACAGGTGCGGCTTGCT+TGG 0.388808 1.4:-54903517 MS.gene24070:CDS
ATCCTTGAACACTGTTTGAT+AGG 0.396654 1.4:-54904030 MS.gene24070:CDS
CTCTTCCTCTACAGGTAATT+CGG 0.397802 1.4:-54903128 MS.gene24070:CDS
GACGCCAATAAGCATCATCT+TGG 0.405314 1.4:+54901818 None:intergenic
GAATGCGTGGCAACTTGAAC+CGG 0.408709 1.4:-54902073 MS.gene24070:CDS
GTTTGGCGTGGCACAGAGGC+AGG 0.410640 1.4:+54903358 None:intergenic
ACCAGCAAGGTTAAGATTTG+TGG 0.415806 1.4:+54904113 None:intergenic
TCCCTTGACCTACTTTGGGT+TGG 0.416051 1.4:+54903719 None:intergenic
CCAACTCACTGCTATGAAAC+AGG 0.420169 1.4:-54903230 MS.gene24070:CDS
TGATGATGGTGTTAGAAATT+GGG 0.422542 1.4:-54903452 MS.gene24070:CDS
CGTGGCACAGAGGCAGGGAT+GGG 0.423260 1.4:+54903364 None:intergenic
CCACATATCGTCCGCACATA+AGG 0.431935 1.4:+54901984 None:intergenic
GCGAACGCATGTCGCGTGCC+TGG 0.435880 1.4:-54903966 MS.gene24070:CDS
CCTTATGTGCGGACGATATG+TGG 0.447450 1.4:-54901984 MS.gene24070:CDS
CTTCTGGCCTCTTCCTCTAC+AGG 0.449598 1.4:-54903136 MS.gene24070:CDS
AAGCCGGTTTCACACAAGAT+TGG 0.450238 1.4:-54903418 MS.gene24070:CDS
GCGTGGCACAGAGGCAGGGA+TGG 0.450671 1.4:+54903363 None:intergenic
GTACCAATCTTGTGTGAAAC+CGG 0.451896 1.4:+54903415 None:intergenic
GACCTATCAAACAGTGTTCA+AGG 0.452361 1.4:+54904028 None:intergenic
CCAGACCGTCCTATAGTGCT+CGG 0.452576 1.4:-54903091 MS.gene24070:CDS
TCTTGTGTGAAACCGGCTTA+AGG 0.455891 1.4:+54903422 None:intergenic
GTGCCTGGAAGCCAGTCAAA+AGG 0.461780 1.4:-54903951 MS.gene24070:CDS
CCAGCAAGGTTAAGATTTGT+GGG 0.465000 1.4:+54904114 None:intergenic
GTTAAGATTTGTGGGATCCA+TGG 0.466327 1.4:+54904122 None:intergenic
GCAGGTAGCCCGAGCACTAT+AGG 0.467447 1.4:+54903082 None:intergenic
GTTCGCTGAAATAGGCAAAC+TGG 0.470508 1.4:+54903983 None:intergenic
CAAAGGAACCGTGACATCAA+TGG 0.471896 1.4:+54903618 None:intergenic
GCGTCTCGTGTCCTTGATGA+AGG 0.476940 1.4:-54903868 MS.gene24070:CDS
GTGGCACAGAGGCAGGGATG+GGG 0.482798 1.4:+54903365 None:intergenic
ATTGAAGGATGTCGGAGTTC+CGG 0.483352 1.4:+54903276 None:intergenic
GTGCGGCTTGCTTGGTCATA+CGG 0.483738 1.4:-54903509 MS.gene24070:CDS
GGAGAATCATTTGCTGCTGA+TGG 0.485476 1.4:-54902968 MS.gene24070:CDS
ACGATATGTGGGAGTGGAAG+AGG 0.490240 1.4:-54901972 MS.gene24070:CDS
TCAGTCTCAAATGGAACAGC+AGG 0.490272 1.4:+54903064 None:intergenic
GCAGGTATATCGCAGCCAAC+AGG 0.490305 1.4:+54903307 None:intergenic
ACAAAACTGGGAACCACACC+AGG 0.492013 1.4:+54903799 None:intergenic
GGAGTTCCGGTACCAGCAGC+AGG 0.496414 1.4:+54903289 None:intergenic
TTTGCTGCTGATGGGGATAT+GGG 0.496695 1.4:-54902959 MS.gene24070:CDS
TCATACGGACAAGGTGTGTC+CGG 0.497073 1.4:-54903494 MS.gene24070:CDS
TTGGGTTGGATGAAACCAAA+TGG 0.500680 1.4:+54903733 None:intergenic
TGGTCTGACTTTGTCTGAAG+AGG 0.501622 1.4:-54904094 MS.gene24070:CDS
GGCGCAAATGTTGTTCCTGT+TGG 0.512460 1.4:-54903322 MS.gene24070:CDS
CGTTTATGAACTTGAGGCCG+AGG 0.515963 1.4:+54902111 None:intergenic
GGTTTCATCCAACCCAAAGT+AGG 0.516131 1.4:-54903727 MS.gene24070:CDS
CGAATTACCTGTAGAGGAAG+AGG 0.518893 1.4:+54903129 None:intergenic
TTAAGATTTGTGGGATCCAT+GGG 0.519569 1.4:+54904123 None:intergenic
AAATAACGAAGAAGTGCATA+AGG 0.520293 1.4:-54903041 MS.gene24070:CDS
GTGTCCGGAGCTGTATGAAT+TGG 0.521204 1.4:-54903479 MS.gene24070:CDS
GCAAGGAAATGCAAGACATT+CGG 0.524862 1.4:-54901909 MS.gene24070:CDS
GGGGTCTTGAAGCCAGCGAT+TGG 0.526020 1.4:+54903384 None:intergenic
ACATTCGGTTGCATGTTACC+GGG 0.526047 1.4:-54901894 MS.gene24070:CDS
GGCAAGCATACGATCATTGA+AGG 0.529590 1.4:+54903261 None:intergenic
TGAACTTGAGGCCGAGGTGT+AGG 0.529993 1.4:+54902117 None:intergenic
CGCCAAACCAATGCTGCTGG+TGG 0.530854 1.4:-54903343 MS.gene24070:CDS
CCTGTTTCATAGCAGTGAGT+TGG 0.533573 1.4:+54903230 None:intergenic
AGGAGCTAGTTACTAACTCA+TGG 0.534186 1.4:-54902044 MS.gene24070:CDS
ATTTGCGCCACCAGCAGCAT+TGG 0.536910 1.4:+54903336 None:intergenic
CCGAGCACTATAGGACGGTC+TGG 0.537267 1.4:+54903091 None:intergenic
ACGCCAATAAGCATCATCTT+GGG 0.537347 1.4:+54901819 None:intergenic
ACGGTCTGGCAACATATTAG+AGG 0.537727 1.4:+54903105 None:intergenic
CCAGCAGCATTGGTTTGGCG+TGG 0.541626 1.4:+54903346 None:intergenic
GTACTGCTGCAACCAATCGC+TGG 0.541819 1.4:-54903396 MS.gene24070:CDS
CGCATGTTCAACCTTCAGAA+TGG 0.543074 1.4:-54902989 MS.gene24070:CDS
TATGAATTGGACTCTGATGA+TGG 0.543306 1.4:-54903466 MS.gene24070:CDS
CTTGTTTCAATTTCACCACA+AGG 0.544219 1.4:-54903896 MS.gene24070:CDS
GATATACCTGCTGCTGGTAC+CGG 0.546434 1.4:-54903295 MS.gene24070:CDS
AATGCGTGGCAACTTGAACC+GGG 0.546767 1.4:-54902072 MS.gene24070:CDS
GAGAATCATTTGCTGCTGAT+GGG 0.548792 1.4:-54902967 MS.gene24070:CDS
GTCAACGCGCTAAAACTCAT+TGG 0.549620 1.4:-54901798 MS.gene24070:intron
TTGGGGAGCTGACCTTAAGC+CGG 0.550680 1.4:-54903434 MS.gene24070:CDS
GGCCACTCTGAGACGCATAT+AGG 0.552354 1.4:+54903639 None:intergenic
GGTCTGACTTTGTCTGAAGA+GGG 0.553936 1.4:-54904093 MS.gene24070:CDS
CAAATGATTCTCCATTCTGA+AGG 0.557019 1.4:+54902978 None:intergenic
CCACGCCAAACCAATGCTGC+TGG 0.559698 1.4:-54903346 MS.gene24070:CDS
ATCCAACCCAAAGTAGGTCA+AGG 0.560028 1.4:-54903721 MS.gene24070:CDS
GGCGCAACACTGACAAGTAT+AGG 0.563029 1.4:+54902138 None:intergenic
TGCCTGGAAGCCAGTCAAAA+GGG 0.564305 1.4:-54903950 MS.gene24070:CDS
ATGCGTGGCAACTTGAACCG+GGG 0.565359 1.4:-54902071 MS.gene24070:CDS
GAGTCCAATTCATACAGCTC+CGG 0.566714 1.4:+54903475 None:intergenic
ATAGGATAATGATCAGAAGT+AGG 0.567632 1.4:+54902156 None:intergenic
GTAACTAGCTCCTTAAACCC+CGG 0.569868 1.4:+54902054 None:intergenic
TTTGGCGTGGCACAGAGGCA+GGG 0.573611 1.4:+54903359 None:intergenic
CAGAGTGGCCATTGATGTCA+CGG 0.574064 1.4:-54903626 MS.gene24070:CDS
CTTGCTTGGTCATACGGACA+AGG 0.574893 1.4:-54903503 MS.gene24070:CDS
GCCAAAATTATCCTTATGTG+CGG 0.578805 1.4:-54901995 MS.gene24070:CDS
AGAGGCCGAATTACCTGTAG+AGG 0.588551 1.4:+54903123 None:intergenic
CAGACCGTCCTATAGTGCTC+GGG 0.589006 1.4:-54903090 MS.gene24070:CDS
AGCAGTGAGTTGGTTCTGGA+AGG 0.590387 1.4:+54903240 None:intergenic
GCTAGTTACTAACTCATGGC+AGG 0.590601 1.4:-54902040 MS.gene24070:CDS
AAATGTCGTTTATGAACTTG+AGG 0.592489 1.4:+54902105 None:intergenic
CTTATGTGCGGACGATATGT+GGG 0.594184 1.4:-54901983 MS.gene24070:CDS
ATACGATCATTGAAGGATGT+CGG 0.599217 1.4:+54903268 None:intergenic
GGCTGCGATATACCTGCTGC+TGG 0.599666 1.4:-54903301 MS.gene24070:CDS
ACAACCACGGACCTTCATCA+AGG 0.599966 1.4:+54903857 None:intergenic
TGGCGTGTTCGTGCTAGTAA+CGG 0.608633 1.4:-54903586 MS.gene24070:CDS
GTTACGATCACAAAATCTGT+TGG 0.611426 1.4:-54903928 MS.gene24070:CDS
TTGGCTCGGATTTGAAGAAG+AGG 0.612704 1.4:-54903015 MS.gene24070:CDS
TCCAACCCAAAGTAGGTCAA+GGG 0.615642 1.4:-54903720 MS.gene24070:CDS
GAAGAAGTGCATAAGGACAT+TGG 0.620210 1.4:-54903034 MS.gene24070:CDS
TGATTCAAGGACACAAAACT+GGG 0.621020 1.4:+54903787 None:intergenic
AGTGCATAAGGACATTGGCT+CGG 0.627151 1.4:-54903029 MS.gene24070:CDS
GTGCGGACGATATGTGGGAG+TGG 0.629111 1.4:-54901978 MS.gene24070:CDS
CCCAAAGTAGGTCAAGGGAT+AGG 0.631660 1.4:-54903715 MS.gene24070:CDS
GGATCGAATCAACCCTGGTG+TGG 0.631726 1.4:-54903812 MS.gene24070:CDS
CACGAGACGCATCCACCTTG+TGG 0.636445 1.4:+54903881 None:intergenic
TGCTATTGTTGAGACTCTTG+TGG 0.642175 1.4:-54902181 MS.gene24070:intron
CATTCGGTTGCATGTTACCG+GGG 0.644145 1.4:-54901893 MS.gene24070:CDS
ATTGGTTTGGCGTGGCACAG+AGG 0.649419 1.4:+54903354 None:intergenic
TGAAACCAAATGGAAGACCA+TGG 0.650045 1.4:+54903743 None:intergenic
GATGATGGTGTTAGAAATTG+GGG 0.652352 1.4:-54903451 MS.gene24070:CDS
TCAGTGTTGCGCCTACACCT+CGG 0.653724 1.4:-54902128 MS.gene24070:CDS
AGAATCATTTGCTGCTGATG+GGG 0.663812 1.4:-54902966 MS.gene24070:CDS
GGATATCGAAGATTGTCGCA+AGG 0.665379 1.4:-54901926 MS.gene24070:CDS
TCGGTTGCATGTTACCGGGG+AGG 0.667536 1.4:-54901890 MS.gene24070:CDS
ACTGGATTTCACGATCAGCA+AGG 0.672093 1.4:+54904001 None:intergenic
GCTATGGATCGAATCAACCC+TGG 0.674227 1.4:-54903817 MS.gene24070:CDS
TGAAAATTATCATACAACCA+CGG 0.679439 1.4:+54903844 None:intergenic
TGCCTATATGCGTCTCAGAG+TGG 0.682455 1.4:-54903641 MS.gene24070:CDS
GTTTCAATTTCACCACAAGG+TGG 0.685119 1.4:-54903893 MS.gene24070:CDS
CAGACAAAGTCAGACCAGCA+AGG 0.687776 1.4:+54904100 None:intergenic
GTGTCCTTGATGAAGGTCCG+TGG 0.705004 1.4:-54903861 MS.gene24070:CDS
GTAGCCCGAGCACTATAGGA+CGG 0.709360 1.4:+54903086 None:intergenic
GGTACTCTTAAGGCATACGA+TGG 0.724968 1.4:-54903682 MS.gene24070:CDS
CAAAACTGGGAACCACACCA+GGG 0.753147 1.4:+54903800 None:intergenic
TGAGACGCATATAGGCACTG+TGG 0.782941 1.4:+54903647 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCATTGTAATAAAATAAAA+AGG - chr1.4:54903872-54903891 MS.gene24070:CDS 10.0%
!! TCATTGTAATAAAATAAAAA+GGG - chr1.4:54903873-54903892 MS.gene24070:CDS 10.0%
!!! AATTTTAAATATGAGAAATT+GGG - chr1.4:54902273-54902292 MS.gene24070:intron 10.0%
!!! TAATTTTAAATATGAGAAAT+TGG - chr1.4:54902272-54902291 MS.gene24070:intron 10.0%
!! AGTATTATTTACAAGTTCAA+CGG + chr1.4:54903275-54903294 None:intergenic 20.0%
!!! TGATAATTTTCATATTGCTA+TGG - chr1.4:54901987-54902006 MS.gene24070:CDS 20.0%
! GAACTTGTAAATAATACTCT+TGG - chr1.4:54903277-54903296 MS.gene24070:CDS 25.0%
! TATACTTGGTTTAAAAGTCT+TGG - chr1.4:54903544-54903563 MS.gene24070:CDS 25.0%
! TGAAAATTATCATACAACCA+CGG + chr1.4:54901979-54901998 None:intergenic 25.0%
!! AAGACTTTTAAACCAAGTAT+AGG + chr1.4:54903545-54903564 None:intergenic 25.0%
!! AGACTTTTAAACCAAGTATA+GGG + chr1.4:54903544-54903563 None:intergenic 25.0%
!!! TACAAAGTTTTTTCATGCTT+CGG - chr1.4:54904065-54904084 MS.gene24070:CDS 25.0%
AAAACTCATTGGTACAAAGA+TGG - chr1.4:54904033-54904052 MS.gene24070:CDS 30.0%
AAATCACCAAATATACACCA+CGG + chr1.4:54903400-54903419 None:intergenic 30.0%
AATGCAGCATATGCTAAAAA+AGG - chr1.4:54902630-54902649 MS.gene24070:intron 30.0%
ACATCTTGCTCATCAAAAAA+AGG + chr1.4:54902951-54902970 None:intergenic 30.0%
ACCATAAATCATTAGCAAGT+TGG + chr1.4:54903603-54903622 None:intergenic 30.0%
ATAGGAACAAATGTTAGTCA+TGG - chr1.4:54902894-54902913 MS.gene24070:intron 30.0%
ATAGGATAATGATCAGAAGT+AGG + chr1.4:54903667-54903686 None:intergenic 30.0%
GATATGGGAAACAATGTAAT+AGG - chr1.4:54902876-54902895 MS.gene24070:intron 30.0%
GCATATGCTAAAAAAGGTAA+CGG - chr1.4:54902636-54902655 MS.gene24070:intron 30.0%
TAAATAATACTCTTGGCACT+TGG - chr1.4:54903284-54903303 MS.gene24070:CDS 30.0%
TAGGAACAAATGTTAGTCAT+GGG - chr1.4:54902895-54902914 MS.gene24070:intron 30.0%
! AAATAACGAAGAAGTGCATA+AGG - chr1.4:54902779-54902798 MS.gene24070:intron 30.0%
! AAATGTCGTTTATGAACTTG+AGG + chr1.4:54903718-54903737 None:intergenic 30.0%
! AAGTTTTCTAGGTACTCTTA+AGG - chr1.4:54902128-54902147 MS.gene24070:CDS 30.0%
! TTTAGCATATGCTGCATTTT+GGG + chr1.4:54902628-54902647 None:intergenic 30.0%
! TTTTAGCATATGCTGCATTT+TGG + chr1.4:54902629-54902648 None:intergenic 30.0%
! TTTTGATGAGCAAGATGTAA+TGG - chr1.4:54902953-54902972 MS.gene24070:CDS 30.0%
!! TCGTTATTTTCAGTCTCAAA+TGG + chr1.4:54902768-54902787 None:intergenic 30.0%
!! TGATGATGGTGTTAGAAATT+GGG - chr1.4:54902368-54902387 MS.gene24070:intron 30.0%
!!! CTTGAATCACATCGATTTTT+GGG - chr1.4:54902047-54902066 MS.gene24070:CDS 30.0%
AGAGTCTCAACAATAGCATT+TGG + chr1.4:54903637-54903656 None:intergenic 35.0%
AGCTTCGAAAAAGAATGCAA+CGG - chr1.4:54903971-54903990 MS.gene24070:CDS 35.0%
AGGAACAAATGTTAGTCATG+GGG - chr1.4:54902896-54902915 MS.gene24070:intron 35.0%
ATACGATCATTGAAGGATGT+CGG + chr1.4:54902555-54902574 None:intergenic 35.0%
ATCCTTGAACACTGTTTGAT+AGG - chr1.4:54901790-54901809 MS.gene24070:intron 35.0%
ATTAGGATAGCCATAATAGC+CGG + chr1.4:54903317-54903336 None:intergenic 35.0%
CAAATGATTCTCCATTCTGA+AGG + chr1.4:54902845-54902864 None:intergenic 35.0%
CATCATCAAGAGAAGTTATG+CGG + chr1.4:54904113-54904132 None:intergenic 35.0%
CCAAAAATCGATGTGATTCA+AGG + chr1.4:54902049-54902068 None:intergenic 35.0%
CTTGTTTCAATTTCACCACA+AGG - chr1.4:54901924-54901943 MS.gene24070:CDS 35.0%
GAAATTGAGTGGAAAGTTGT+CGG + chr1.4:54903372-54903391 None:intergenic 35.0%
GAGTCTCACTAAGGAATAAA+AGG + chr1.4:54903099-54903118 None:intergenic 35.0%
GCCAAAATTATCCTTATGTG+CGG - chr1.4:54903825-54903844 MS.gene24070:CDS 35.0%
GTATAGGGATATCCTTCAAT+CGG + chr1.4:54903529-54903548 None:intergenic 35.0%
GTTACGATCACAAAATCTGT+TGG - chr1.4:54901892-54901911 MS.gene24070:CDS 35.0%
TATAGGGATATCCTTCAATC+GGG + chr1.4:54903528-54903547 None:intergenic 35.0%
TATGAATTGGACTCTGATGA+TGG - chr1.4:54902354-54902373 MS.gene24070:intron 35.0%
TATTATGGCTATCCTAATGG+AGG - chr1.4:54903319-54903338 MS.gene24070:CDS 35.0%
TCACTAAGGAATAAAAGGTC+CGG + chr1.4:54903094-54903113 None:intergenic 35.0%
TGATTCAAGGACACAAAACT+GGG + chr1.4:54902036-54902055 None:intergenic 35.0%
TTGAAGGATATCCCTATACT+TGG - chr1.4:54903530-54903549 MS.gene24070:CDS 35.0%
! CGGTTCCTTTGAAAAAAGAA+TGG - chr1.4:54902214-54902233 MS.gene24070:intron 35.0%
! GATAGCAGTATTTTCAGACT+CGG + chr1.4:54901773-54901792 None:intergenic 35.0%
! GATGATGGTGTTAGAAATTG+GGG - chr1.4:54902369-54902388 MS.gene24070:intron 35.0%
! TCCGCACATAAGGATAATTT+TGG + chr1.4:54903829-54903848 None:intergenic 35.0%
! TTATGCGGTTTACCTTTTTC+CGG + chr1.4:54904098-54904117 None:intergenic 35.0%
!! ACTTCTCTTGATGATGATGT+AGG - chr1.4:54904117-54904136 MS.gene24070:CDS 35.0%
!! CTGATGATGGTGTTAGAAAT+TGG - chr1.4:54902367-54902386 MS.gene24070:intron 35.0%
!! GCCAACTTGCTAATGATTTA+TGG - chr1.4:54903599-54903618 MS.gene24070:CDS 35.0%
!! TATTTTCAGACTCGGTTTCA+AGG + chr1.4:54901765-54901784 None:intergenic 35.0%
!! TGGTGATTTTAACGACATCT+TGG - chr1.4:54903411-54903430 MS.gene24070:CDS 35.0%
!!! AATTGGGTGTTTTTTGTCAC+AGG - chr1.4:54902289-54902308 MS.gene24070:intron 35.0%
!!! ACACGCCATTCTTTTTTCAA+AGG + chr1.4:54902222-54902241 None:intergenic 35.0%
!!! CCTTGAATCACATCGATTTT+TGG - chr1.4:54902046-54902065 MS.gene24070:CDS 35.0%
AACAAATGTTAGTCATGGGG+GGG - chr1.4:54902899-54902918 MS.gene24070:intron 40.0%
ACCAGCAAGGTTAAGATTTG+TGG + chr1.4:54901710-54901729 None:intergenic 40.0%
ACGCCAATAAGCATCATCTT+GGG + chr1.4:54904004-54904023 None:intergenic 40.0%
AGGAGCTAGTTACTAACTCA+TGG - chr1.4:54903776-54903795 MS.gene24070:CDS 40.0%
CAACTTTCCACTCAATTTCC+AGG - chr1.4:54903373-54903392 MS.gene24070:CDS 40.0%
CAGACCTTAAGTACCTAGTT+CGG - chr1.4:54903059-54903078 MS.gene24070:CDS 40.0%
CCAAAATAAAGCTAAACCCC+CGG + chr1.4:54903203-54903222 None:intergenic 40.0%
CCAGCAAGGTTAAGATTTGT+GGG + chr1.4:54901709-54901728 None:intergenic 40.0%
CGAAATCCGTTTATAAGCCA+TGG + chr1.4:54903472-54903491 None:intergenic 40.0%
CGTTCTCCATGGCTTATAAA+CGG - chr1.4:54903463-54903482 MS.gene24070:CDS 40.0%
CTCTTCCTCTACAGGTAATT+CGG - chr1.4:54902692-54902711 MS.gene24070:intron 40.0%
GAACAAATGTTAGTCATGGG+GGG - chr1.4:54902898-54902917 MS.gene24070:intron 40.0%
GAAGAACTTCGTTGTTTGCT+TGG - chr1.4:54903139-54903158 MS.gene24070:CDS 40.0%
GACCTATCAAACAGTGTTCA+AGG + chr1.4:54901795-54901814 None:intergenic 40.0%
GCAAGGAAATGCAAGACATT+CGG - chr1.4:54903911-54903930 MS.gene24070:CDS 40.0%
GGAACAAATGTTAGTCATGG+GGG - chr1.4:54902897-54902916 MS.gene24070:intron 40.0%
GGCTATTATGGCTATCCTAA+TGG - chr1.4:54903316-54903335 MS.gene24070:CDS 40.0%
GTACCAATCTTGTGTGAAAC+CGG + chr1.4:54902408-54902427 None:intergenic 40.0%
GTGATTCAAGGACACAAAAC+TGG + chr1.4:54902037-54902056 None:intergenic 40.0%
GTTTCAATTTCACCACAAGG+TGG - chr1.4:54901927-54901946 MS.gene24070:CDS 40.0%
TGAAACCAAATGGAAGACCA+TGG + chr1.4:54902080-54902099 None:intergenic 40.0%
TGCTATTGTTGAGACTCTTG+TGG - chr1.4:54903639-54903658 MS.gene24070:CDS 40.0%
TTGTCGGAGAAAATTCCAAG+CGG + chr1.4:54903356-54903375 None:intergenic 40.0%
! AGAATCATTTGCTGCTGATG+GGG - chr1.4:54902854-54902873 MS.gene24070:intron 40.0%
! AGACTCGGTTTCAAGGTTTA+GGG + chr1.4:54901758-54901777 None:intergenic 40.0%
! ATTTTCGCTATGAGAATGCG+TGG - chr1.4:54903734-54903753 MS.gene24070:CDS 40.0%
! CAAGGGATAGGAAGTTTTCT+AGG - chr1.4:54902117-54902136 MS.gene24070:CDS 40.0%
! GAAGAAGTGCATAAGGACAT+TGG - chr1.4:54902786-54902805 MS.gene24070:intron 40.0%
! GAGAATCATTTGCTGCTGAT+GGG - chr1.4:54902853-54902872 MS.gene24070:intron 40.0%
! TATGCGGTTTACCTTTTTCC+GGG + chr1.4:54904097-54904116 None:intergenic 40.0%
! TTAAGGTCTGGAATTGCACT+CGG + chr1.4:54903049-54903068 None:intergenic 40.0%
!! TTGGGTTGGATGAAACCAAA+TGG + chr1.4:54902090-54902109 None:intergenic 40.0%
AAAAAGAATGCAACGGCTGC+TGG - chr1.4:54903978-54903997 MS.gene24070:CDS 45.0%
AATGGCAGGTCCTGATGATT+AGG - chr1.4:54902971-54902990 MS.gene24070:CDS 45.0%
ACATTCGGTTGCATGTTACC+GGG - chr1.4:54903926-54903945 MS.gene24070:CDS 45.0%
ACGGTCTGGCAACATATTAG+AGG + chr1.4:54902718-54902737 None:intergenic 45.0%
ACTGGATTTCACGATCAGCA+AGG + chr1.4:54901822-54901841 None:intergenic 45.0%
ATCCAACCCAAAGTAGGTCA+AGG - chr1.4:54902099-54902118 MS.gene24070:CDS 45.0%
ATTGAAGGATGTCGGAGTTC+CGG + chr1.4:54902547-54902566 None:intergenic 45.0%
CAAAGGAACCGTGACATCAA+TGG + chr1.4:54902205-54902224 None:intergenic 45.0%
CAAGTCCATGGTCTTCCATT+TGG - chr1.4:54902072-54902091 MS.gene24070:CDS 45.0%
CCAACTCACTGCTATGAAAC+AGG - chr1.4:54902590-54902609 MS.gene24070:intron 45.0%
CCCACAAATCTTAACCTTGC+TGG - chr1.4:54901706-54901725 MS.gene24070:intron 45.0%
CCTATCCCTTGACCTACTTT+GGG + chr1.4:54902108-54902127 None:intergenic 45.0%
CCTGTTTCATAGCAGTGAGT+TGG + chr1.4:54902593-54902612 None:intergenic 45.0%
CGAACTAGGTACTTAAGGTC+TGG + chr1.4:54903061-54903080 None:intergenic 45.0%
CGAATTACCTGTAGAGGAAG+AGG + chr1.4:54902694-54902713 None:intergenic 45.0%
CGCATGTTCAACCTTCAGAA+TGG - chr1.4:54902831-54902850 MS.gene24070:intron 45.0%
CTAAACTCATTTGCCTAGGC+AGG + chr1.4:54902997-54903016 None:intergenic 45.0%
CTTATGTGCGGACGATATGT+GGG - chr1.4:54903837-54903856 MS.gene24070:CDS 45.0%
CTTGGACACCAGTGAGAAAA+GGG - chr1.4:54903429-54903448 MS.gene24070:CDS 45.0%
GACATTCGGTTGCATGTTAC+CGG - chr1.4:54903925-54903944 MS.gene24070:CDS 45.0%
GACGCCAATAAGCATCATCT+TGG + chr1.4:54904005-54904024 None:intergenic 45.0%
GAGTCCAATTCATACAGCTC+CGG + chr1.4:54902348-54902367 None:intergenic 45.0%
GATGAGCAAGATGTAATGGC+AGG - chr1.4:54902957-54902976 MS.gene24070:CDS 45.0%
GCCACTAAACTCATTTGCCT+AGG + chr1.4:54903001-54903020 None:intergenic 45.0%
GCCTAGGCAAATGAGTTTAG+TGG - chr1.4:54902997-54903016 MS.gene24070:CDS 45.0%
GCTAGTTACTAACTCATGGC+AGG - chr1.4:54903780-54903799 MS.gene24070:CDS 45.0%
GGATATCGAAGATTGTCGCA+AGG - chr1.4:54903894-54903913 MS.gene24070:CDS 45.0%
GGCAAATGAGTTTAGTGGCA+TGG - chr1.4:54903002-54903021 MS.gene24070:CDS 45.0%
GGCAAGCATACGATCATTGA+AGG + chr1.4:54902562-54902581 None:intergenic 45.0%
GGTACTCTTAAGGCATACGA+TGG - chr1.4:54902138-54902157 MS.gene24070:CDS 45.0%
GGTCTGACTTTGTCTGAAGA+GGG - chr1.4:54901727-54901746 MS.gene24070:intron 45.0%
GGTTTCATCCAACCCAAAGT+AGG - chr1.4:54902093-54902112 MS.gene24070:CDS 45.0%
GTAACTAGCTCCTTAAACCC+CGG + chr1.4:54903769-54903788 None:intergenic 45.0%
GTCAACGCGCTAAAACTCAT+TGG - chr1.4:54904022-54904041 MS.gene24070:CDS 45.0%
GTTCGCTGAAATAGGCAAAC+TGG + chr1.4:54901840-54901859 None:intergenic 45.0%
GTTTAGTGGCATGGAATTGC+CGG - chr1.4:54903011-54903030 MS.gene24070:CDS 45.0%
TATAAGCCATGGAGAACGCA+TGG + chr1.4:54903461-54903480 None:intergenic 45.0%
TCAGTCTCAAATGGAACAGC+AGG + chr1.4:54902759-54902778 None:intergenic 45.0%
TCCAACCCAAAGTAGGTCAA+GGG - chr1.4:54902100-54902119 MS.gene24070:CDS 45.0%
TCCTATCCCTTGACCTACTT+TGG + chr1.4:54902109-54902128 None:intergenic 45.0%
TCTTGGACACCAGTGAGAAA+AGG - chr1.4:54903428-54903447 MS.gene24070:CDS 45.0%
TGGCCCAAGATGATGCTTAT+TGG - chr1.4:54903998-54904017 MS.gene24070:CDS 45.0%
TGGTCTGACTTTGTCTGAAG+AGG - chr1.4:54901726-54901745 MS.gene24070:intron 45.0%
TGTGAGCTAGAGTCTCACTA+AGG + chr1.4:54903108-54903127 None:intergenic 45.0%
TTATCTGACGTCCCGATTGA+AGG - chr1.4:54903514-54903533 MS.gene24070:CDS 45.0%
TTGGACACCAGTGAGAAAAG+GGG - chr1.4:54903430-54903449 MS.gene24070:CDS 45.0%
TTTAGTGGCATGGAATTGCC+GGG - chr1.4:54903012-54903031 MS.gene24070:CDS 45.0%
TTTGCTGCTGATGGGGATAT+GGG - chr1.4:54902861-54902880 MS.gene24070:intron 45.0%
! AAGCCGGTTTCACACAAGAT+TGG - chr1.4:54902402-54902421 MS.gene24070:intron 45.0%
! AGTGCATAAGGACATTGGCT+CGG - chr1.4:54902791-54902810 MS.gene24070:intron 45.0%
! AGTGCCGAACTAGGTACTTA+AGG + chr1.4:54903066-54903085 None:intergenic 45.0%
! ATTTGCTGCTGATGGGGATA+TGG - chr1.4:54902860-54902879 MS.gene24070:intron 45.0%
! CAGACTCGGTTTCAAGGTTT+AGG + chr1.4:54901759-54901778 None:intergenic 45.0%
! GGAGAATCATTTGCTGCTGA+TGG - chr1.4:54902852-54902871 MS.gene24070:intron 45.0%
! GTGATCGTAACCCTTTTGAC+TGG + chr1.4:54901883-54901902 None:intergenic 45.0%
! TAAGGTCTGGAATTGCACTC+GGG + chr1.4:54903048-54903067 None:intergenic 45.0%
! TCTTGTGTGAAACCGGCTTA+AGG + chr1.4:54902401-54902420 None:intergenic 45.0%
! TGTTTTCATGTAGACCGCAC+CGG - chr1.4:54903172-54903191 MS.gene24070:CDS 45.0%
!! TCATAGCAGTGAGTTGGTTC+TGG + chr1.4:54902587-54902606 None:intergenic 45.0%
!! TTGGCTCGGATTTGAAGAAG+AGG - chr1.4:54902805-54902824 MS.gene24070:intron 45.0%
!!! CCGGGGGTTTAGCTTTATTT+TGG - chr1.4:54903200-54903219 MS.gene24070:CDS 45.0%
!!! GATTTTTGGGTGCAAGTCCA+TGG - chr1.4:54902060-54902079 MS.gene24070:CDS 45.0%
!!! GGTGTTTTTTGTCACAGGTG+CGG - chr1.4:54902294-54902313 MS.gene24070:intron 45.0%
AATGCGTGGCAACTTGAACC+GGG - chr1.4:54903748-54903767 MS.gene24070:CDS 50.0%
ACAAAACTGGGAACCACACC+AGG + chr1.4:54902024-54902043 None:intergenic 50.0%
ACAACCACGGACCTTCATCA+AGG + chr1.4:54901966-54901985 None:intergenic 50.0%
ACGATATGTGGGAGTGGAAG+AGG - chr1.4:54903848-54903867 MS.gene24070:CDS 50.0%
AGAGGCCGAATTACCTGTAG+AGG + chr1.4:54902700-54902719 None:intergenic 50.0%
CAAAACTGGGAACCACACCA+GGG + chr1.4:54902023-54902042 None:intergenic 50.0%
CAGACAAAGTCAGACCAGCA+AGG + chr1.4:54901723-54901742 None:intergenic 50.0%
CAGAGTGGCCATTGATGTCA+CGG - chr1.4:54902194-54902213 MS.gene24070:intron 50.0%
CATTCGGTTGCATGTTACCG+GGG - chr1.4:54903927-54903946 MS.gene24070:CDS 50.0%
CCAAATATACACCACGGACC+TGG + chr1.4:54903394-54903413 None:intergenic 50.0%
CCACATATCGTCCGCACATA+AGG + chr1.4:54903839-54903858 None:intergenic 50.0%
CCAGGTCCGTGGTGTATATT+TGG - chr1.4:54903391-54903410 MS.gene24070:CDS 50.0%
CCCAAAGTAGGTCAAGGGAT+AGG - chr1.4:54902105-54902124 MS.gene24070:CDS 50.0%
CCTAGTTCGGCACTTCAATC+CGG - chr1.4:54903072-54903091 MS.gene24070:CDS 50.0%
CCTTATGTGCGGACGATATG+TGG - chr1.4:54903836-54903855 MS.gene24070:CDS 50.0%
CGACATGCGTTCGCTGAAAT+AGG + chr1.4:54901848-54901867 None:intergenic 50.0%
CGTCGAGCTGTTCTTGATTC+AGG - chr1.4:54903490-54903509 MS.gene24070:CDS 50.0%
CGTTTATGAACTTGAGGCCG+AGG + chr1.4:54903712-54903731 None:intergenic 50.0%
CTTGCTTGGTCATACGGACA+AGG - chr1.4:54902317-54902336 MS.gene24070:intron 50.0%
GAATGCGTGGCAACTTGAAC+CGG - chr1.4:54903747-54903766 MS.gene24070:CDS 50.0%
GATATACCTGCTGCTGGTAC+CGG - chr1.4:54902525-54902544 MS.gene24070:intron 50.0%
GCAACTTGAACCGGGGTTTA+AGG - chr1.4:54903756-54903775 MS.gene24070:CDS 50.0%
GCTATGGATCGAATCAACCC+TGG - chr1.4:54902003-54902022 MS.gene24070:CDS 50.0%
GCTGTTCTACGACCTCCATT+AGG + chr1.4:54903334-54903353 None:intergenic 50.0%
GGCGCAAATGTTGTTCCTGT+TGG - chr1.4:54902498-54902517 MS.gene24070:intron 50.0%
GGCGCAACACTGACAAGTAT+AGG + chr1.4:54903685-54903704 None:intergenic 50.0%
GTGTCCGGAGCTGTATGAAT+TGG - chr1.4:54902341-54902360 MS.gene24070:intron 50.0%
TCATACGGACAAGGTGTGTC+CGG - chr1.4:54902326-54902345 MS.gene24070:intron 50.0%
TCCCTTGACCTACTTTGGGT+TGG + chr1.4:54902104-54902123 None:intergenic 50.0%
TGCCTATATGCGTCTCAGAG+TGG - chr1.4:54902179-54902198 MS.gene24070:intron 50.0%
TGCCTGGAAGCCAGTCAAAA+GGG - chr1.4:54901870-54901889 MS.gene24070:CDS 50.0%
TGCTTGCAAAGTGCAGCTTC+TGG - chr1.4:54902668-54902687 MS.gene24070:intron 50.0%
TGGACACCAGTGAGAAAAGG+GGG - chr1.4:54903431-54903450 MS.gene24070:CDS 50.0%
TGGCGTGTTCGTGCTAGTAA+CGG - chr1.4:54902234-54902253 MS.gene24070:intron 50.0%
TTAGTGGCATGGAATTGCCG+GGG - chr1.4:54903013-54903032 MS.gene24070:CDS 50.0%
! TGAGACGCATATAGGCACTG+TGG + chr1.4:54902176-54902195 None:intergenic 50.0%
! TGGCGTCTTACCGGCTATTA+TGG - chr1.4:54903304-54903323 MS.gene24070:CDS 50.0%
!! AGCAGTGAGTTGGTTCTGGA+AGG + chr1.4:54902583-54902602 None:intergenic 50.0%
!! CATGCGATTTTGATCCTCCC+CGG + chr1.4:54903947-54903966 None:intergenic 50.0%
!!! AACCCTTTTGACTGGCTTCC+AGG + chr1.4:54901875-54901894 None:intergenic 50.0%
AACCTTTCTTCCACCGCACG+CGG + chr1.4:54903574-54903593 None:intergenic 55.0%
ATGCGTGGCAACTTGAACCG+GGG - chr1.4:54903749-54903768 MS.gene24070:CDS 55.0%
ATTTGCGCCACCAGCAGCAT+TGG + chr1.4:54902487-54902506 None:intergenic 55.0%
CAGACCGTCCTATAGTGCTC+GGG - chr1.4:54902730-54902749 MS.gene24070:intron 55.0%
CCACGGACCTGGAAATTGAG+TGG + chr1.4:54903383-54903402 None:intergenic 55.0%
CCACTCAATTTCCAGGTCCG+TGG - chr1.4:54903380-54903399 MS.gene24070:CDS 55.0%
CCAGACCGTCCTATAGTGCT+CGG - chr1.4:54902729-54902748 MS.gene24070:intron 55.0%
CCTAGGCAGGCCTAATCATC+AGG + chr1.4:54902984-54903003 None:intergenic 55.0%
CCTGATGATTAGGCCTGCCT+AGG - chr1.4:54902981-54903000 MS.gene24070:CDS 55.0%
CTTCTGGCCTCTTCCTCTAC+AGG - chr1.4:54902684-54902703 MS.gene24070:intron 55.0%
CTTGGCACTTGGCGTCTTAC+CGG - chr1.4:54903295-54903314 MS.gene24070:CDS 55.0%
GCAGGTATATCGCAGCCAAC+AGG + chr1.4:54902516-54902535 None:intergenic 55.0%
GCGTCTCGTGTCCTTGATGA+AGG - chr1.4:54901952-54901971 MS.gene24070:CDS 55.0%
GGATCGAATCAACCCTGGTG+TGG - chr1.4:54902008-54902027 MS.gene24070:CDS 55.0%
GTACTGCTGCAACCAATCGC+TGG - chr1.4:54902424-54902443 MS.gene24070:intron 55.0%
GTAGCCCGAGCACTATAGGA+CGG + chr1.4:54902737-54902756 None:intergenic 55.0%
GTGCCTGGAAGCCAGTCAAA+AGG - chr1.4:54901869-54901888 MS.gene24070:CDS 55.0%
GTGTCCTTGATGAAGGTCCG+TGG - chr1.4:54901959-54901978 MS.gene24070:CDS 55.0%
TCAGTGTTGCGCCTACACCT+CGG - chr1.4:54903692-54903711 MS.gene24070:CDS 55.0%
TGAACTTGAGGCCGAGGTGT+AGG + chr1.4:54903706-54903725 None:intergenic 55.0%
TTCATGCTTCGGCAACAGCC+CGG - chr1.4:54904076-54904095 MS.gene24070:CDS 55.0%
TTCGGCAACAGCCCGGAAAA+AGG - chr1.4:54904083-54904102 MS.gene24070:CDS 55.0%
TTGGGGAGCTGACCTTAAGC+CGG - chr1.4:54902386-54902405 MS.gene24070:intron 55.0%
! GTGCGGCTTGCTTGGTCATA+CGG - chr1.4:54902311-54902330 MS.gene24070:intron 55.0%
!! ATTGGTTTGGCGTGGCACAG+AGG + chr1.4:54902469-54902488 None:intergenic 55.0%
!! CCGGATTGAAGTGCCGAACT+AGG + chr1.4:54903075-54903094 None:intergenic 55.0%
!! GGCCACTCTGAGACGCATAT+AGG + chr1.4:54902184-54902203 None:intergenic 55.0%
ACCTTTCTTCCACCGCACGC+GGG + chr1.4:54903573-54903592 None:intergenic 60.0%
AGCTAAACCCCCGGCTCTAC+CGG + chr1.4:54903194-54903213 None:intergenic 60.0%
CACGAGACGCATCCACCTTG+TGG + chr1.4:54901942-54901961 None:intergenic 60.0%
CCACGCCAAACCAATGCTGC+TGG - chr1.4:54902474-54902493 MS.gene24070:intron 60.0%
CCGAGCACTATAGGACGGTC+TGG + chr1.4:54902732-54902751 None:intergenic 60.0%
CGCCAAACCAATGCTGCTGG+TGG - chr1.4:54902477-54902496 MS.gene24070:intron 60.0%
GAGGTCGTAGAACAGCCGCT+TGG - chr1.4:54903338-54903357 MS.gene24070:CDS 60.0%
GCAGGTAGCCCGAGCACTAT+AGG + chr1.4:54902741-54902760 None:intergenic 60.0%
GCATGGAATTGCCGGGGTGT+AGG - chr1.4:54903019-54903038 MS.gene24070:CDS 60.0%
GGCTGCGATATACCTGCTGC+TGG - chr1.4:54902519-54902538 MS.gene24070:intron 60.0%
GGGGTCTTGAAGCCAGCGAT+TGG + chr1.4:54902439-54902458 None:intergenic 60.0%
GTGCGGACGATATGTGGGAG+TGG - chr1.4:54903842-54903861 MS.gene24070:CDS 60.0%
TCGGTTGCATGTTACCGGGG+AGG - chr1.4:54903930-54903949 MS.gene24070:CDS 60.0%
TTTGGCGTGGCACAGAGGCA+GGG + chr1.4:54902464-54902483 None:intergenic 60.0%
! TGTCACAGGTGCGGCTTGCT+TGG - chr1.4:54902303-54902322 MS.gene24070:intron 60.0%
!! CCAGCAGCATTGGTTTGGCG+TGG + chr1.4:54902477-54902496 None:intergenic 60.0%
!! CGCCACCAGCAGCATTGGTT+TGG + chr1.4:54902482-54902501 None:intergenic 60.0%
AAGTCTTGGCACCCCGCGTG+CGG - chr1.4:54903558-54903577 MS.gene24070:CDS 65.0%
CACTCGGGCTACCTACACCC+CGG + chr1.4:54903033-54903052 None:intergenic 65.0%
CCTTTCTTCCACCGCACGCG+GGG + chr1.4:54903572-54903591 None:intergenic 65.0%
CGTGGCACAGAGGCAGGGAT+GGG + chr1.4:54902459-54902478 None:intergenic 65.0%
GGAGTTCCGGTACCAGCAGC+AGG + chr1.4:54902534-54902553 None:intergenic 65.0%
GGCGCACCATGCGTTCTCCA+TGG - chr1.4:54903452-54903471 MS.gene24070:CDS 65.0%
GTGGCACAGAGGCAGGGATG+GGG + chr1.4:54902458-54902477 None:intergenic 65.0%
GTTTGGCGTGGCACAGAGGC+AGG + chr1.4:54902465-54902484 None:intergenic 65.0%
! GGTGCGCCCCCTTTTCTCAC+TGG + chr1.4:54903440-54903459 None:intergenic 65.0%
! GTAGACCGCACCGGTAGAGC+CGG - chr1.4:54903181-54903200 MS.gene24070:CDS 65.0%
! TAGACCGCACCGGTAGAGCC+GGG - chr1.4:54903182-54903201 MS.gene24070:CDS 65.0%
AACCCCCGGCTCTACCGGTG+CGG + chr1.4:54903189-54903208 None:intergenic 70.0%
CCCCGCGTGCGGTGGAAGAA+AGG - chr1.4:54903569-54903588 MS.gene24070:CDS 70.0%
GCGAACGCATGTCGCGTGCC+TGG - chr1.4:54901854-54901873 MS.gene24070:CDS 70.0%
GCGTGGCACAGAGGCAGGGA+TGG + chr1.4:54902460-54902479 None:intergenic 70.0%
! AGACCGCACCGGTAGAGCCG+GGG - chr1.4:54903183-54903202 MS.gene24070:CDS 70.0%
TCTTGGCACCCCGCGTGCGG+TGG - chr1.4:54903561-54903580 MS.gene24070:CDS 75.0%
! GACCGCACCGGTAGAGCCGG+GGG - chr1.4:54903184-54903203 MS.gene24070:CDS 75.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 54901700 54904142 54901700 ID=MS.gene24070
chr1.4 mRNA 54901700 54904142 54901700 ID=MS.gene24070.t1;Parent=MS.gene24070
chr1.4 exon 54902937 54904142 54902937 ID=MS.gene24070.t1.exon1;Parent=MS.gene24070.t1
chr1.4 CDS 54902937 54904142 54902937 ID=cds.MS.gene24070.t1;Parent=MS.gene24070.t1
chr1.4 exon 54901799 54902190 54901799 ID=MS.gene24070.t1.exon2;Parent=MS.gene24070.t1
chr1.4 CDS 54901799 54902190 54901799 ID=cds.MS.gene24070.t1;Parent=MS.gene24070.t1
chr1.4 exon 54901700 54901703 54901700 ID=MS.gene24070.t1.exon3;Parent=MS.gene24070.t1
chr1.4 CDS 54901700 54901703 54901700 ID=cds.MS.gene24070.t1;Parent=MS.gene24070.t1
Gene Sequence

>MS.gene24070

ATGGATCCCACAAATCTTAACCTTGCTGGTCTGACTTTGTCTGAAGAGGGTCTAACCCTAAACCTTGAAACCGAGTCTGAAAATACTGCTATCCTTGAACACTGTTTGATAGGTCGAGTCCTTGCTGATCGTGAAATCCAGTTTGCCTATTTCAGCGAACGCATGTCGCGTGCCTGGAAGCCAGTCAAAAGGGTTACGATCACAAAATCTGTTGGTGATCGTTTCTTGTTTCAATTTCACCACAAGGTGGATGCGTCTCGTGTCCTTGATGAAGGTCCGTGGTTGTATGATAATTTTCATATTGCTATGGATCGAATCAACCCTGGTGTGGTTCCCAGTTTTGTGTCCTTGAATCACATCGATTTTTGGGTGCAAGTCCATGGTCTTCCATTTGGTTTCATCCAACCCAAAGTAGGTCAAGGGATAGGAAGTTTTCTAGGTACTCTTAAGGCATACGATGGTCGTAACACAATCCACAGTGCCTATATGCGTCTCAGAGTGGCCATTGATGTCACGGTTCCTTTGAAAAAAGAATGGCGTGTTCGTGCTAGTAACGGTGCTTTTGTGACAGTTAATTTTAAATATGAGAAATTGGGTGTTTTTTGTCACAGGTGCGGCTTGCTTGGTCATACGGACAAGGTGTGTCCGGAGCTGTATGAATTGGACTCTGATGATGGTGTTAGAAATTGGGGAGCTGACCTTAAGCCGGTTTCACACAAGATTGGTACTGCTGCAACCAATCGCTGGCTTCAAGACCCCATCCCTGCCTCTGTGCCACGCCAAACCAATGCTGCTGGTGGCGCAAATGTTGTTCCTGTTGGCTGCGATATACCTGCTGCTGGTACCGGAACTCCGACATCCTTCAATGATCGTATGCTTGCCTTCCAGAACCAACTCACTGCTATGAAACAGGATGTTATCGCTGCCCAAAATGCAGCATATGCTAAAAAAGGTAACGGTTCTAATTCTGCTTGCAAAGTGCAGCTTCTGGCCTCTTCCTCTACAGGTAATTCGGCCTCTAATATGTTGCCAGACCGTCCTATAGTGCTCGGGCTACCTGCTGTTCCATTTGAGACTGAAAATAACGAAGAAGTGCATAAGGACATTGGCTCGGATTTGAAGAAGAGGAAGCGCATGTTCAACCTTCAGAATGGAGAATCATTTGCTGCTGATGGGGATATGGGAAACAATGTAATAGGAACAAATGTTAGTCATGGGGGGGATGCTGAAATGAATGTATTTTCTAATCCTTTTTTTGATGAGCAAGATGTAATGGCAGGTCCTGATGATTAGGCCTGCCTAGGCAAATGAGTTTAGTGGCATGGAATTGCCGGGGTGTAGGTAGCCCGAGTGCAATTCCAGACCTTAAGTACCTAGTTCGGCACTTCAATCCGGACCTTTTATTCCTTAGTGAGACTCTAGCTCACAGAAATAAAATTGAAGAACTTCGTTGTTTGCTTGGTTACGATTCTTGTTTTCATGTAGACCGCACCGGTAGAGCCGGGGGTTTAGCTTTATTTTGGAAAAATTCATTGAATTGTCAACTTATTAATTTTTCAAGTAATCATATTACCGTTGAACTTGTAAATAATACTCTTGGCACTTGGCGTCTTACCGGCTATTATGGCTATCCTAATGGAGGTCGTAGAACAGCCGCTTGGAATTTTCTCCGACAACTTTCCACTCAATTTCCAGGTCCGTGGTGTATATTTGGTGATTTTAACGACATCTTGGACACCAGTGAGAAAAGGGGGCGCACCATGCGTTCTCCATGGCTTATAAACGGATTTCGTCGAGCTGTTCTTGATTCAGGTTTATCTGACGTCCCGATTGAAGGATATCCCTATACTTGGTTTAAAAGTCTTGGCACCCCGCGTGCGGTGGAAGAAAGGTTAGATCGCCAACTTGCTAATGATTTATGGTTTAATATGTTTCCAAATGCTATTGTTGAGACTCTTGTGGCACCTACTTCTGATCATTATCCTATACTTGTCAGTGTTGCGCCTACACCTCGGCCTCAAGTTCATAAACGACATTTTCGCTATGAGAATGCGTGGCAACTTGAACCGGGGTTTAAGGAGCTAGTTACTAACTCATGGCAGGACAATTCAGCAAGCACTCTTATGCCAAAATTATCCTTATGTGCGGACGATATGTGGGAGTGGAAGAGGCATCATTGTAATAAAATAAAAAGGGATATCGAAGATTGTCGCAAGGAAATGCAAGACATTCGGTTGCATGTTACCGGGGAGGATCAAAATCGCATGCTTGAGCTTCGAAAAAGAATGCAACGGCTGCTGGCCCAAGATGATGCTTATTGGCGTCAACGCGCTAAAACTCATTGGTACAAAGATGGAGACAGAAATACAAAGTTTTTTCATGCTTCGGCAACAGCCCGGAAAAAGGTAAACCGCATAACTTCTCTTGATGATGATGTAGGTAA
Protein sequence

>MS.gene24070.t1

MDPTNLNLAGLTLSEEGLTLNLETESENTAILEHCLIGRVLADREIQFAYFSERMSRAWKPVKRVTITKSVGDRFLFQFHHKVDASRVLDEGPWLYDNFHIAMDRINPGVVPSFVSLNHIDFWVQVHGLPFGFIQPKVGQGIGSFLGTLKAYDGRNTIHSAYMRLRVAIDVTVPLKKEWRVRASNGAFVTVNFKYEKLGVFCHRCGLLGHTDKVCPELYELDSDDGVRNWGADLKPVSHKIGTAATNRWLQDPIPASVPRQTNAAGGANVVPVGCDIPAAGTGTPTSFNDRMLAFQNQLTAMKQDVIAAQNAAYAKKGNGSNSACKVQLLASSSTGNSASNMLPDRPIVLGLPAVPFETENNEEVHKDIGSDLKKRKRMFNLQNGESFAADGDMGNNVIGTNTLVAPTSDHYPILVSVAPTPRPQVHKRHFRYENAWQLEPGFKELVTNSWQDNSASTLMPKLSLCADDMWEWKRHHCNKIKRDIEDCRKEMQDIRLHVTGEDQNRMLELRKRMQRLLAQDDAYWRQRAKTHW