Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20246.t1 | RHN74097.1 | 39.9 | 469 | 219 | 13 | 6 | 431 | 317 | 765 | 1.90E-77 | 300.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20246.t1 | A0A396JG42 | 39.9 | 469 | 219 | 13 | 6 | 431 | 317 | 765 | 1.3e-77 | 300.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20246.t1 | MTR_6g033215 | 31.319 | 182 | 95 | 1 | 2 | 153 | 113 | 294 | 5.43e-31 | 121 |
| MS.gene20246.t1 | MTR_3g053920 | 33.094 | 139 | 92 | 1 | 6 | 143 | 24 | 162 | 2.76e-22 | 97.1 |
| MS.gene20246.t1 | MTR_0010s0370 | 34.711 | 121 | 79 | 0 | 11 | 131 | 27 | 147 | 9.11e-22 | 93.2 |
| MS.gene20246.t1 | MTR_0010s0350 | 34.711 | 121 | 79 | 0 | 11 | 131 | 27 | 147 | 9.11e-22 | 93.2 |
| MS.gene20246.t1 | MTR_2g061500 | 37.374 | 99 | 62 | 0 | 13 | 111 | 31 | 129 | 2.51e-19 | 84.7 |
| MS.gene20246.t1 | MTR_4g103530 | 38.202 | 89 | 55 | 0 | 41 | 129 | 5 | 93 | 4.30e-16 | 77.0 |
| MS.gene20246.t1 | MTR_1g036720 | 37.313 | 67 | 42 | 0 | 18 | 84 | 34 | 100 | 1.33e-13 | 67.4 |
| MS.gene20246.t1 | MTR_7g011710 | 37.179 | 78 | 49 | 0 | 37 | 114 | 1 | 78 | 3.03e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 137 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTTGAATGTTGTCTTAT+TGG | 0.083998 | 5.1:-8708094 | MS.gene20246:CDS |
| CTTCTTTGAACAGAAATTAT+AGG | 0.230749 | 5.1:+8707548 | None:intergenic |
| GTGCTGCAGACCTGATAAAT+TGG | 0.250815 | 5.1:-8705873 | MS.gene20246:CDS |
| CTGTTTCTCCCAAGCTTAAC+AGG | 0.260860 | 5.1:-8707195 | MS.gene20246:CDS |
| CCATTGCTTTCAAATATAAA+AGG | 0.269830 | 5.1:-8707611 | MS.gene20246:CDS |
| TTACACGGTAAAGTTAAAAT+TGG | 0.277067 | 5.1:-8707357 | MS.gene20246:CDS |
| ATTCTTCACTCCGGAGGATA+TGG | 0.280348 | 5.1:-8707951 | MS.gene20246:CDS |
| TTGGCGACACCTACATTTGC+TGG | 0.292340 | 5.1:-8707249 | MS.gene20246:CDS |
| GATTGTTCATCCTTGCTTCC+TGG | 0.298645 | 5.1:+8707115 | None:intergenic |
| GTGAACATGAAAGTCTGTTT+TGG | 0.307721 | 5.1:-8707881 | MS.gene20246:CDS |
| CAAGGGATGGTGTGAAGAAA+TGG | 0.309844 | 5.1:-8707512 | MS.gene20246:CDS |
| TTTCTGCTCTGCACCTTTGT+TGG | 0.313586 | 5.1:+8706933 | None:intergenic |
| GTAATGCTTGATAGTAATAT+AGG | 0.320010 | 5.1:-8706781 | MS.gene20246:CDS |
| GCTTTAGGCTTCACGCTTCT+AGG | 0.323257 | 5.1:+8706973 | None:intergenic |
| CAAAGCTGCCTGTGCTAGTC+TGG | 0.324731 | 5.1:+8707466 | None:intergenic |
| AGCTTGGGAGAAACAGATTC+TGG | 0.334769 | 5.1:+8707202 | None:intergenic |
| CCCTAGACAAAGCTGAGATA+TGG | 0.340811 | 5.1:-8707838 | MS.gene20246:CDS |
| TAATGCTTGATAGTAATATA+GGG | 0.340952 | 5.1:-8706780 | MS.gene20246:CDS |
| GTAGCTGACAGTTGAGAAAT+TGG | 0.342262 | 5.1:+8707027 | None:intergenic |
| ATGGATAAGCTTTGATCCTT+TGG | 0.342280 | 5.1:-8707268 | MS.gene20246:CDS |
| TAACAGATGGAATATCTTCC+TGG | 0.349089 | 5.1:+8706848 | None:intergenic |
| TGGTTCTGCGGTGTTGGTAC+AGG | 0.349191 | 5.1:+8707222 | None:intergenic |
| TGAGGCAAGTCTAGTCTTCA+TGG | 0.350602 | 5.1:+8708036 | None:intergenic |
| TTCCAACTCTGTTGAACAAA+TGG | 0.352189 | 5.1:+8705937 | None:intergenic |
| GCTTTCAAATATAAAAGGTT+GGG | 0.361803 | 5.1:-8707606 | MS.gene20246:CDS |
| GGTCCTTGTCCCAATTTATC+AGG | 0.383467 | 5.1:+8705863 | None:intergenic |
| GTAATTTCAACCTGTTTGTC+TGG | 0.389698 | 5.1:+8708004 | None:intergenic |
| TATCCTCCGGAGTGAAGAAT+TGG | 0.395878 | 5.1:+8707954 | None:intergenic |
| CATTGCTGTCAATGCTGAGC+AGG | 0.401668 | 5.1:-8706821 | MS.gene20246:CDS |
| AGACAACATTCAAAGAGGTC+TGG | 0.412546 | 5.1:+8708100 | None:intergenic |
| ACCTGCGTTCCTGTTAAGCT+TGG | 0.415438 | 5.1:+8707186 | None:intergenic |
| GACAACATTCAAAGAGGTCT+GGG | 0.417751 | 5.1:+8708101 | None:intergenic |
| CAAAGAGCCATGGACCTGTT+TGG | 0.422226 | 5.1:+8707918 | None:intergenic |
| GCTTATCCATTCGTTACTGC+TGG | 0.425418 | 5.1:+8707281 | None:intergenic |
| GTGAAGCCTAAAGCTGTAAA+GGG | 0.431496 | 5.1:-8706964 | MS.gene20246:CDS |
| GGAATTCTGTGAAGCATTGT+TGG | 0.433581 | 5.1:+8708123 | None:intergenic |
| TATGCAGGAGAAACTATTAC+AGG | 0.434773 | 5.1:-8705910 | MS.gene20246:CDS |
| GCCCATTTGTTCAACAGAGT+TGG | 0.437494 | 5.1:-8705939 | MS.gene20246:CDS |
| AGCAGATCAGAGCGCTTGTC+GGG | 0.439064 | 5.1:-8707778 | MS.gene20246:CDS |
| GGTTCTGCGGTGTTGGTACA+GGG | 0.440288 | 5.1:+8707223 | None:intergenic |
| ATCTGATGTGCTTGTAGTCC+AGG | 0.440630 | 5.1:-8706866 | MS.gene20246:CDS |
| GTGACAGTGGTGCGGAAGGT+AGG | 0.440839 | 5.1:-8707425 | MS.gene20246:CDS |
| TGCTTTCAAATATAAAAGGT+TGG | 0.442256 | 5.1:-8707607 | MS.gene20246:CDS |
| CCCATATCTCAGCTTTGTCT+AGG | 0.450703 | 5.1:+8707837 | None:intergenic |
| GGTGCGGAAGGTAGGGGAAG+AGG | 0.451571 | 5.1:-8707417 | MS.gene20246:CDS |
| TGACAGTGGTGCGGAAGGTA+GGG | 0.453455 | 5.1:-8707424 | MS.gene20246:CDS |
| CTTTCAAATATAAAAGGTTG+GGG | 0.454958 | 5.1:-8707605 | MS.gene20246:CDS |
| AATGTGGCAGCCAGACAAAC+AGG | 0.454975 | 5.1:-8708014 | MS.gene20246:CDS |
| CTCTCATGATTGACACTGAT+CGG | 0.464598 | 5.1:-8707092 | MS.gene20246:CDS |
| TTCTGTTCAAAGAAGTATGC+AGG | 0.465735 | 5.1:-8707540 | MS.gene20246:CDS |
| GACTAGCACAGGCAGCTTTG+AGG | 0.467183 | 5.1:-8707463 | MS.gene20246:CDS |
| CCTGCGTTCCTGTTAAGCTT+GGG | 0.468009 | 5.1:+8707187 | None:intergenic |
| CCTAGACAAAGCTGAGATAT+GGG | 0.468844 | 5.1:-8707837 | MS.gene20246:CDS |
| AAGGGATGGTGTGAAGAAAT+GGG | 0.470404 | 5.1:-8707511 | MS.gene20246:CDS |
| CGTGAAGCCTAAAGCTGTAA+AGG | 0.470428 | 5.1:-8706965 | MS.gene20246:CDS |
| CCATATCTCAGCTTTGTCTA+GGG | 0.473076 | 5.1:+8707838 | None:intergenic |
| CTCAACCTGATGTCATTCAT+AGG | 0.473594 | 5.1:-8707380 | MS.gene20246:CDS |
| TGCTCAGTCATGAAACCAAA+CGG | 0.488035 | 5.1:+8707797 | None:intergenic |
| TAGTCTTCATGGCTTGAAAA+CGG | 0.493389 | 5.1:+8708047 | None:intergenic |
| GGGGATTTCTGCTATGTATG+TGG | 0.497680 | 5.1:-8707585 | MS.gene20246:CDS |
| CAGTTACATAACCTCCCGTT+TGG | 0.497919 | 5.1:-8707812 | MS.gene20246:CDS |
| TGCTATGTATGTGGTATACT+AGG | 0.498113 | 5.1:-8707576 | MS.gene20246:CDS |
| GCTTCATCTGACTCGTTGCT+AGG | 0.503067 | 5.1:+8707156 | None:intergenic |
| TCCAACTCTGTTGAACAAAT+GGG | 0.506223 | 5.1:+8705938 | None:intergenic |
| ATGGAACGCATATACCAAAC+AGG | 0.509960 | 5.1:-8707932 | MS.gene20246:CDS |
| AGCTTAACAGGAACGCAGGT+TGG | 0.511488 | 5.1:-8707183 | MS.gene20246:CDS |
| TCTCATGATTGACACTGATC+GGG | 0.512127 | 5.1:-8707091 | MS.gene20246:CDS |
| GGTAGGGGAAGAGGTAGTCA+AGG | 0.512911 | 5.1:-8707408 | MS.gene20246:CDS |
| GACAGTGGTGCGGAAGGTAG+GGG | 0.515604 | 5.1:-8707423 | MS.gene20246:CDS |
| GAGCAGATCAGAGCGCTTGT+CGG | 0.516580 | 5.1:-8707779 | MS.gene20246:CDS |
| AGATTCTGGTTCTGCGGTGT+TGG | 0.520868 | 5.1:+8707216 | None:intergenic |
| TTCATGGCTTGAAAACGGAT+TGG | 0.522617 | 5.1:+8708052 | None:intergenic |
| ACACATCGCAAGGTTGGTCC+AGG | 0.526219 | 5.1:-8707133 | MS.gene20246:CDS |
| TGGAACTCAGCCTTGAGCAT+TGG | 0.526521 | 5.1:+8707486 | None:intergenic |
| CATGTTCCAATTCTTCACTC+CGG | 0.532120 | 5.1:-8707960 | MS.gene20246:CDS |
| ACGGTAAAGTTAAAATTGGA+AGG | 0.532565 | 5.1:-8707353 | MS.gene20246:CDS |
| TGCTGCAGACCTGATAAATT+GGG | 0.539911 | 5.1:-8705872 | MS.gene20246:CDS |
| AGTTGAGAAATTGGTGGAGT+CGG | 0.545489 | 5.1:+8707036 | None:intergenic |
| GCTGAGTTCCAGACTAGCAC+AGG | 0.547044 | 5.1:-8707474 | MS.gene20246:CDS |
| GCTCAGTCATGAAACCAAAC+GGG | 0.552714 | 5.1:+8707798 | None:intergenic |
| AGAAGTATGCAGGAGGTGCA+AGG | 0.554936 | 5.1:-8707530 | MS.gene20246:CDS |
| CAGAGTTGGAATTCATATGC+AGG | 0.555306 | 5.1:-8705925 | MS.gene20246:CDS |
| TTAACAGGAACGCAGGTTGG+AGG | 0.556214 | 5.1:-8707180 | MS.gene20246:CDS |
| GGCAGAAGAACTGAATTGAC+AGG | 0.565675 | 5.1:+8707057 | None:intergenic |
| ACAGGTTGAAATTACTCGAA+TGG | 0.566957 | 5.1:-8707996 | MS.gene20246:CDS |
| TGAAGCACACATCGCAAGGT+TGG | 0.569904 | 5.1:-8707139 | MS.gene20246:CDS |
| TAACAGGAACGCAGGTTGGA+GGG | 0.574217 | 5.1:-8707179 | MS.gene20246:CDS |
| TGTAACCTATGAATGACATC+AGG | 0.578296 | 5.1:+8707375 | None:intergenic |
| CTGCTCAGCATTGACAGCAA+TGG | 0.582629 | 5.1:+8706822 | None:intergenic |
| CAAGGTTGGTCCAGGAAGCA+AGG | 0.582724 | 5.1:-8707125 | MS.gene20246:CDS |
| GCAGCTTTGAGGATAATCAA+TGG | 0.582929 | 5.1:-8707452 | MS.gene20246:CDS |
| CAGATGAAGCACACATCGCA+AGG | 0.583933 | 5.1:-8707143 | MS.gene20246:CDS |
| CCCAAGCTTAACAGGAACGC+AGG | 0.590015 | 5.1:-8707187 | MS.gene20246:CDS |
| ACAGGGGTTCCAGCAAATGT+AGG | 0.591809 | 5.1:+8707240 | None:intergenic |
| ACAGCAATGGAAATAACAGA+TGG | 0.594445 | 5.1:+8706835 | None:intergenic |
| AATGCTTGATAGTAATATAG+GGG | 0.596709 | 5.1:-8706779 | MS.gene20246:CDS |
| GAAGTATGCAGGAGGTGCAA+GGG | 0.598828 | 5.1:-8707529 | MS.gene20246:CDS |
| GCATATACCAAACAGGTCCA+TGG | 0.601480 | 5.1:-8707925 | MS.gene20246:CDS |
| ACTGTCAGCTACTCTAACAA+AGG | 0.607101 | 5.1:-8707016 | MS.gene20246:CDS |
| TATATGCGTTCCATATCCTC+CGG | 0.608445 | 5.1:+8707941 | None:intergenic |
| AACAGAAGACAAAGGAAGCG+AGG | 0.610123 | 5.1:-8706893 | MS.gene20246:CDS |
| CAATAAGACAACATTCAAAG+AGG | 0.611201 | 5.1:+8708095 | None:intergenic |
| GCTGACAGTTGAGAAATTGG+TGG | 0.612736 | 5.1:+8707030 | None:intergenic |
| TGAAGAATTGGAACATGAAG+CGG | 0.613118 | 5.1:+8707966 | None:intergenic |
| GTTCCAATTCTTCACTCCGG+AGG | 0.617812 | 5.1:-8707957 | MS.gene20246:CDS |
| TATGCAGGAGGTGCAAGGGA+TGG | 0.619180 | 5.1:-8707525 | MS.gene20246:CDS |
| ATTGCTGTCAATGCTGAGCA+GGG | 0.621103 | 5.1:-8706820 | MS.gene20246:CDS |
| CATATCTCAGCTTTGTCTAG+GGG | 0.624863 | 5.1:+8707839 | None:intergenic |
| CGATCAGTGTCAATCATGAG+AGG | 0.625223 | 5.1:+8707093 | None:intergenic |
| CAACATCCAGCAGTAACGAA+TGG | 0.626658 | 5.1:-8707287 | MS.gene20246:CDS |
| GAAATGGGGACCAATGCTCA+AGG | 0.628010 | 5.1:-8707496 | MS.gene20246:CDS |
| GTTCTGCGGTGTTGGTACAG+GGG | 0.628521 | 5.1:+8707224 | None:intergenic |
| ATAAATTGGGACAAGGACCA+TGG | 0.632730 | 5.1:-8705859 | MS.gene20246:CDS |
| ATCTTACAAAACGACCGATG+TGG | 0.643272 | 5.1:+8707753 | None:intergenic |
| TTTGTCTGGCTGCCACATTG+AGG | 0.644151 | 5.1:+8708018 | None:intergenic |
| GCGCTTGTCGGGAACCACAT+CGG | 0.646386 | 5.1:-8707767 | MS.gene20246:CDS |
| ATAAAGTTGTCAAAGAGCCA+TGG | 0.655153 | 5.1:+8707908 | None:intergenic |
| GAATTGGAACATGAAGCGGT+TGG | 0.656870 | 5.1:+8707970 | None:intergenic |
| TTTCAAATATAAAAGGTTGG+GGG | 0.657006 | 5.1:-8707604 | MS.gene20246:CDS |
| GATGTCATTCATAGGTTACA+CGG | 0.658826 | 5.1:-8707372 | MS.gene20246:CDS |
| AATCAATGGTTGCGTGACAG+TGG | 0.659492 | 5.1:-8707438 | MS.gene20246:CDS |
| GCAAATGTAGGTGTCGCCAA+AGG | 0.661222 | 5.1:+8707252 | None:intergenic |
| AAGGGGAAAACAACCAACAA+AGG | 0.661600 | 5.1:-8706946 | MS.gene20246:CDS |
| TGAAGCCTAAAGCTGTAAAG+GGG | 0.661947 | 5.1:-8706963 | MS.gene20246:CDS |
| AGAAACAGATTCTGGTTCTG+CGG | 0.663623 | 5.1:+8707210 | None:intergenic |
| TTGCGTGACAGTGGTGCGGA+AGG | 0.664856 | 5.1:-8707429 | MS.gene20246:CDS |
| AGAAGACAAAGGAAGCGAGG+AGG | 0.669582 | 5.1:-8706890 | MS.gene20246:CDS |
| AGGGATGGTGTGAAGAAATG+GGG | 0.673190 | 5.1:-8707510 | MS.gene20246:CDS |
| GTCAGCTACTCTAACAAAGG+TGG | 0.676159 | 5.1:-8707013 | MS.gene20246:CDS |
| CAGTCATGAAACCAAACGGG+AGG | 0.685267 | 5.1:+8707801 | None:intergenic |
| AGACCTGATAAATTGGGACA+AGG | 0.685283 | 5.1:-8705866 | MS.gene20246:CDS |
| AGACTAGACTTGCCTCAATG+TGG | 0.689637 | 5.1:-8708030 | MS.gene20246:CDS |
| TGTTCAAAGAAGTATGCAGG+AGG | 0.690495 | 5.1:-8707537 | MS.gene20246:CDS |
| ACAACATTCAAAGAGGTCTG+GGG | 0.691191 | 5.1:+8708102 | None:intergenic |
| AGAAGAACTGAATTGACAGG+TGG | 0.692967 | 5.1:+8707060 | None:intergenic |
| ATGGTTGCGTGACAGTGGTG+CGG | 0.708882 | 5.1:-8707433 | MS.gene20246:CDS |
| AGATTGAGAACAGAAGACAA+AGG | 0.727766 | 5.1:-8706901 | MS.gene20246:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATGCTTGATAGTAATATA+GGG | - | chr5.1:8707185-8707204 | MS.gene20246:CDS | 20.0% |
| ! | AATTTGATAGATTAGAGAGT+TGG | + | chr5.1:8707625-8707644 | None:intergenic | 25.0% |
| ! | CCATTGCTTTCAAATATAAA+AGG | - | chr5.1:8706354-8706373 | MS.gene20246:intron | 25.0% |
| ! | CTAATCTATCAAATTTACCA+TGG | - | chr5.1:8707630-8707649 | MS.gene20246:CDS | 25.0% |
| ! | CTTCTTTGAACAGAAATTAT+AGG | + | chr5.1:8706420-8706439 | None:intergenic | 25.0% |
| ! | CTTTCAAATATAAAAGGTTG+GGG | - | chr5.1:8706360-8706379 | MS.gene20246:intron | 25.0% |
| ! | GCTTTCAAATATAAAAGGTT+GGG | - | chr5.1:8706359-8706378 | MS.gene20246:intron | 25.0% |
| ! | TGCTTTCAAATATAAAAGGT+TGG | - | chr5.1:8706358-8706377 | MS.gene20246:intron | 25.0% |
| ! | TTACACGGTAAAGTTAAAAT+TGG | - | chr5.1:8706608-8706627 | MS.gene20246:intron | 25.0% |
| ! | TTCTCAAAATCATATTGATG+TGG | - | chr5.1:8707505-8707524 | MS.gene20246:CDS | 25.0% |
| ! | TTTCAAATATAAAAGGTTGG+GGG | - | chr5.1:8706361-8706380 | MS.gene20246:intron | 25.0% |
| !! | AATGCTTGATAGTAATATAG+GGG | - | chr5.1:8707186-8707205 | MS.gene20246:CDS | 25.0% |
| !! | CCTTTTATATTTGAAAGCAA+TGG | + | chr5.1:8706357-8706376 | None:intergenic | 25.0% |
| !! | GTAATGCTTGATAGTAATAT+AGG | - | chr5.1:8707184-8707203 | MS.gene20246:CDS | 25.0% |
| !! | TACGACTTTGAAAATAACTA+CGG | - | chr5.1:8706234-8706253 | MS.gene20246:intron | 25.0% |
| !!! | AGAAAAATGAGTTTTTAAGC+TGG | - | chr5.1:8707252-8707271 | MS.gene20246:CDS | 25.0% |
| !!! | GCTTAAAAACTCATTTTTCT+TGG | + | chr5.1:8707252-8707271 | None:intergenic | 25.0% |
| !!! | TAAAAACTCATTTTTCTTGG+CGG | + | chr5.1:8707249-8707268 | None:intergenic | 25.0% |
| !!! | TTGACTTTTTCTAAGCATAT+TGG | - | chr5.1:8706653-8706672 | MS.gene20246:intron | 25.0% |
| AAAACAACAATCAAAACCCA+AGG | + | chr5.1:8707408-8707427 | None:intergenic | 30.0% | |
| AAATCATATTGATGTGGAAG+TGG | - | chr5.1:8707511-8707530 | MS.gene20246:CDS | 30.0% | |
| AATTTACCATGGTGCATAAT+TGG | - | chr5.1:8707641-8707660 | MS.gene20246:CDS | 30.0% | |
| ACGGTAAAGTTAAAATTGGA+AGG | - | chr5.1:8706612-8706631 | MS.gene20246:intron | 30.0% | |
| AGAAGAAAGGAAGAAATGAT+AGG | - | chr5.1:8707693-8707712 | MS.gene20246:intron | 30.0% | |
| CAAACCTTAAGTATCTTAAC+CGG | - | chr5.1:8707309-8707328 | MS.gene20246:CDS | 30.0% | |
| CAATAAGACAACATTCAAAG+AGG | + | chr5.1:8705873-8705892 | None:intergenic | 30.0% | |
| CTCTTTGAATGTTGTCTTAT+TGG | - | chr5.1:8705871-8705890 | MS.gene20246:CDS | 30.0% | |
| GAAGAAAGGAAGAAATGATA+GGG | - | chr5.1:8707694-8707713 | MS.gene20246:intron | 30.0% | |
| GAAGAATTAAAGTATGCCTT+GGG | - | chr5.1:8707389-8707408 | MS.gene20246:CDS | 30.0% | |
| TCATACAAGATTATTCCATC+CGG | + | chr5.1:8707344-8707363 | None:intergenic | 30.0% | |
| TGAAGAATTAAAGTATGCCT+TGG | - | chr5.1:8707388-8707407 | MS.gene20246:CDS | 30.0% | |
| TGGAGGATTATAATTTCACA+TGG | - | chr5.1:8707780-8707799 | MS.gene20246:CDS | 30.0% | |
| TTCACATGGTTTAAGAGTTT+AGG | - | chr5.1:8707794-8707813 | MS.gene20246:CDS | 30.0% | |
| TTTCGACAACATAACAAACA+AGG | - | chr5.1:8707956-8707975 | MS.gene20246:CDS | 30.0% | |
| ! | ACTCATTGATATTTTCATGG+AGG | - | chr5.1:8707763-8707782 | MS.gene20246:CDS | 30.0% |
| ! | AGGACTCATTGATATTTTCA+TGG | - | chr5.1:8707760-8707779 | MS.gene20246:CDS | 30.0% |
| ! | AGTTTCGGTTTGAAAATTCT+TGG | - | chr5.1:8707984-8708003 | MS.gene20246:CDS | 30.0% |
| ! | TGAACATGAAAGTCTGTTTT+GGG | - | chr5.1:8706085-8706104 | MS.gene20246:intron | 30.0% |
| !! | AAAAACTCATTTTTCTTGGC+GGG | + | chr5.1:8707248-8707267 | None:intergenic | 30.0% |
| AAATCACCAATTATGCACCA+TGG | + | chr5.1:8707650-8707669 | None:intergenic | 35.0% | |
| ACAGCAATGGAAATAACAGA+TGG | + | chr5.1:8707133-8707152 | None:intergenic | 35.0% | |
| AGATTGAGAACAGAAGACAA+AGG | - | chr5.1:8707064-8707083 | MS.gene20246:CDS | 35.0% | |
| AGGGGATACTAATGTTGTAA+TGG | - | chr5.1:8707204-8707223 | MS.gene20246:CDS | 35.0% | |
| ATAAAGTTGTCAAAGAGCCA+TGG | + | chr5.1:8706060-8706079 | None:intergenic | 35.0% | |
| CGGTTAAGATACTTAAGGTT+TGG | + | chr5.1:8707311-8707330 | None:intergenic | 35.0% | |
| GATACACAAGATACTCTCAA+GGG | + | chr5.1:8707935-8707954 | None:intergenic | 35.0% | |
| GATGTCATTCATAGGTTACA+CGG | - | chr5.1:8706593-8706612 | MS.gene20246:intron | 35.0% | |
| GGATACTAATGTTGTAATGG+CGG | - | chr5.1:8707207-8707226 | MS.gene20246:CDS | 35.0% | |
| GTAATTTCAACCTGTTTGTC+TGG | + | chr5.1:8705964-8705983 | None:intergenic | 35.0% | |
| TAACAGATGGAATATCTTCC+TGG | + | chr5.1:8707120-8707139 | None:intergenic | 35.0% | |
| TAGTCTTCATGGCTTGAAAA+CGG | + | chr5.1:8705921-8705940 | None:intergenic | 35.0% | |
| TATGCAGGAGAAACTATTAC+AGG | - | chr5.1:8708055-8708074 | MS.gene20246:CDS | 35.0% | |
| TCCAACTCTGTTGAACAAAT+GGG | + | chr5.1:8708030-8708049 | None:intergenic | 35.0% | |
| TGAAGAATTGGAACATGAAG+CGG | + | chr5.1:8706002-8706021 | None:intergenic | 35.0% | |
| TGATACACAAGATACTCTCA+AGG | + | chr5.1:8707936-8707955 | None:intergenic | 35.0% | |
| TGCTATGTATGTGGTATACT+AGG | - | chr5.1:8706389-8706408 | MS.gene20246:intron | 35.0% | |
| TGGTGATTTCAACGATATTC+TGG | - | chr5.1:8707661-8707680 | MS.gene20246:intron | 35.0% | |
| TGTAACCTATGAATGACATC+AGG | + | chr5.1:8706593-8706612 | None:intergenic | 35.0% | |
| TTCCAACTCTGTTGAACAAA+TGG | + | chr5.1:8708031-8708050 | None:intergenic | 35.0% | |
| ! | ACAGGTTGAAATTACTCGAA+TGG | - | chr5.1:8705969-8705988 | MS.gene20246:intron | 35.0% |
| ! | ATGGATAAGCTTTGATCCTT+TGG | - | chr5.1:8706697-8706716 | MS.gene20246:intron | 35.0% |
| ! | GAACATGAAAGTCTGTTTTG+GGG | - | chr5.1:8706086-8706105 | MS.gene20246:intron | 35.0% |
| ! | GTGAACATGAAAGTCTGTTT+TGG | - | chr5.1:8706084-8706103 | MS.gene20246:intron | 35.0% |
| ! | GTTTTGCAACTGATAGAGAA+GGG | - | chr5.1:8707423-8707442 | MS.gene20246:CDS | 35.0% |
| ! | TCGGTTTGAAAATTCTTGGA+TGG | - | chr5.1:8707988-8708007 | MS.gene20246:CDS | 35.0% |
| ! | TGTTTTGCAACTGATAGAGA+AGG | - | chr5.1:8707422-8707441 | MS.gene20246:CDS | 35.0% |
| ! | TTAAGGTTTGGAACTGTACT+CGG | + | chr5.1:8707299-8707318 | None:intergenic | 35.0% |
| ! | TTCTGTTCAAAGAAGTATGC+AGG | - | chr5.1:8706425-8706444 | MS.gene20246:intron | 35.0% |
| !! | AAAGTCAAGAGTTTTGTAGC+AGG | + | chr5.1:8706641-8706660 | None:intergenic | 35.0% |
| !! | AGTTTTTAAGCTGGAACTGT+CGG | - | chr5.1:8707261-8707280 | MS.gene20246:CDS | 35.0% |
| AAGGGATGGTGTGAAGAAAT+GGG | - | chr5.1:8706454-8706473 | MS.gene20246:intron | 40.0% | |
| AAGGGGAAAACAACCAACAA+AGG | - | chr5.1:8707019-8707038 | MS.gene20246:CDS | 40.0% | |
| ACAAACAAGGCAGACAGTTT+CGG | - | chr5.1:8707969-8707988 | MS.gene20246:CDS | 40.0% | |
| ACAACATTCAAAGAGGTCTG+GGG | + | chr5.1:8705866-8705885 | None:intergenic | 40.0% | |
| ACTGTCAGCTACTCTAACAA+AGG | - | chr5.1:8706949-8706968 | MS.gene20246:CDS | 40.0% | |
| AGAAGAACTGAATTGACAGG+TGG | + | chr5.1:8706908-8706927 | None:intergenic | 40.0% | |
| AGACAACATTCAAAGAGGTC+TGG | + | chr5.1:8705868-8705887 | None:intergenic | 40.0% | |
| AGACCTGATAAATTGGGACA+AGG | - | chr5.1:8708099-8708118 | MS.gene20246:CDS | 40.0% | |
| AGGACCATGGACAAAAAACA+TGG | - | chr5.1:8708119-8708138 | MS.gene20246:CDS | 40.0% | |
| AGGTCCGGTTAAGATACTTA+AGG | + | chr5.1:8707316-8707335 | None:intergenic | 40.0% | |
| AGTATCTTAACCGGACCTTT+AGG | - | chr5.1:8707318-8707337 | MS.gene20246:CDS | 40.0% | |
| AGTTGAGAAATTGGTGGAGT+CGG | + | chr5.1:8706932-8706951 | None:intergenic | 40.0% | |
| ATAAATTGGGACAAGGACCA+TGG | - | chr5.1:8708106-8708125 | MS.gene20246:CDS | 40.0% | |
| ATCTTACAAAACGACCGATG+TGG | + | chr5.1:8706215-8706234 | None:intergenic | 40.0% | |
| ATGGAACGCATATACCAAAC+AGG | - | chr5.1:8706033-8706052 | MS.gene20246:intron | 40.0% | |
| CAGAGTTGGAATTCATATGC+AGG | - | chr5.1:8708040-8708059 | MS.gene20246:CDS | 40.0% | |
| CATGTTCCAATTCTTCACTC+CGG | - | chr5.1:8706005-8706024 | MS.gene20246:intron | 40.0% | |
| CCTAGACAAAGCTGAGATAT+GGG | - | chr5.1:8706128-8706147 | MS.gene20246:intron | 40.0% | |
| CTCAACCTGATGTCATTCAT+AGG | - | chr5.1:8706585-8706604 | MS.gene20246:intron | 40.0% | |
| CTCTCATGATTGACACTGAT+CGG | - | chr5.1:8706873-8706892 | MS.gene20246:CDS | 40.0% | |
| GACAACATTCAAAGAGGTCT+GGG | + | chr5.1:8705867-8705886 | None:intergenic | 40.0% | |
| GAGGTGGAATTGCATTTCTT+TGG | - | chr5.1:8707450-8707469 | MS.gene20246:CDS | 40.0% | |
| GGTTTCTATGGTTATCCTGA+AGG | - | chr5.1:8707566-8707585 | MS.gene20246:CDS | 40.0% | |
| GTAGCTGACAGTTGAGAAAT+TGG | + | chr5.1:8706941-8706960 | None:intergenic | 40.0% | |
| GTAGTAAGAGAAAGGCTTCA+TGG | - | chr5.1:8707588-8707607 | MS.gene20246:CDS | 40.0% | |
| GTGAAGCCTAAAGCTGTAAA+GGG | - | chr5.1:8707001-8707020 | MS.gene20246:CDS | 40.0% | |
| TATATGCGTTCCATATCCTC+CGG | + | chr5.1:8706027-8706046 | None:intergenic | 40.0% | |
| TCCTGAAGGTAGTAAGAGAA+AGG | - | chr5.1:8707580-8707599 | MS.gene20246:CDS | 40.0% | |
| TCTCATGATTGACACTGATC+GGG | - | chr5.1:8706874-8706893 | MS.gene20246:CDS | 40.0% | |
| TGAAGCCTAAAGCTGTAAAG+GGG | - | chr5.1:8707002-8707021 | MS.gene20246:CDS | 40.0% | |
| TGCTCAGTCATGAAACCAAA+CGG | + | chr5.1:8706171-8706190 | None:intergenic | 40.0% | |
| TGCTGCAGACCTGATAAATT+GGG | - | chr5.1:8708093-8708112 | MS.gene20246:CDS | 40.0% | |
| TTCATGGCTTGAAAACGGAT+TGG | + | chr5.1:8705916-8705935 | None:intergenic | 40.0% | |
| ! | CATATCTCAGCTTTGTCTAG+GGG | + | chr5.1:8706129-8706148 | None:intergenic | 40.0% |
| ! | CCATATCTCAGCTTTGTCTA+GGG | + | chr5.1:8706130-8706149 | None:intergenic | 40.0% |
| ! | GTTTTCCCCTTTACAGCTTT+AGG | + | chr5.1:8707010-8707029 | None:intergenic | 40.0% |
| ! | TAAGGTTTGGAACTGTACTC+GGG | + | chr5.1:8707298-8707317 | None:intergenic | 40.0% |
| ! | TGTTCAAAGAAGTATGCAGG+AGG | - | chr5.1:8706428-8706447 | MS.gene20246:intron | 40.0% |
| !! | AGAAACAGATTCTGGTTCTG+CGG | + | chr5.1:8706758-8706777 | None:intergenic | 40.0% |
| !! | GCAGCTTTGAGGATAATCAA+TGG | - | chr5.1:8706513-8706532 | MS.gene20246:intron | 40.0% |
| !! | GGAATTCTGTGAAGCATTGT+TGG | + | chr5.1:8705845-8705864 | None:intergenic | 40.0% |
| !! | GTTTTTAAGCTGGAACTGTC+GGG | - | chr5.1:8707262-8707281 | MS.gene20246:CDS | 40.0% |
| !! | TTGAACAAATGGGCTGAACT+CGG | + | chr5.1:8708020-8708039 | None:intergenic | 40.0% |
| !! | TTTTTAAGCTGGAACTGTCG+GGG | - | chr5.1:8707263-8707282 | MS.gene20246:CDS | 40.0% |
| !!! | CTCTCCATGTTTTTTGTCCA+TGG | + | chr5.1:8708126-8708145 | None:intergenic | 40.0% |
| AACAGAAGACAAAGGAAGCG+AGG | - | chr5.1:8707072-8707091 | MS.gene20246:CDS | 45.0% | |
| AATCAATGGTTGCGTGACAG+TGG | - | chr5.1:8706527-8706546 | MS.gene20246:intron | 45.0% | |
| AGACTAGACTTGCCTCAATG+TGG | - | chr5.1:8705935-8705954 | MS.gene20246:CDS | 45.0% | |
| AGCTTGGGAGAAACAGATTC+TGG | + | chr5.1:8706766-8706785 | None:intergenic | 45.0% | |
| AGGGATGGTGTGAAGAAATG+GGG | - | chr5.1:8706455-8706474 | MS.gene20246:intron | 45.0% | |
| ATCTGATGTGCTTGTAGTCC+AGG | - | chr5.1:8707099-8707118 | MS.gene20246:CDS | 45.0% | |
| ATTCTTCACTCCGGAGGATA+TGG | - | chr5.1:8706014-8706033 | MS.gene20246:intron | 45.0% | |
| ATTGCTGTCAATGCTGAGCA+GGG | - | chr5.1:8707145-8707164 | MS.gene20246:CDS | 45.0% | |
| CAACATCCAGCAGTAACGAA+TGG | - | chr5.1:8706678-8706697 | MS.gene20246:intron | 45.0% | |
| CAAGGGATGGTGTGAAGAAA+TGG | - | chr5.1:8706453-8706472 | MS.gene20246:intron | 45.0% | |
| CAGTTACATAACCTCCCGTT+TGG | - | chr5.1:8706153-8706172 | MS.gene20246:intron | 45.0% | |
| CCCTAGACAAAGCTGAGATA+TGG | - | chr5.1:8706127-8706146 | MS.gene20246:intron | 45.0% | |
| CGATCAGTGTCAATCATGAG+AGG | + | chr5.1:8706875-8706894 | None:intergenic | 45.0% | |
| CGTGAAGCCTAAAGCTGTAA+AGG | - | chr5.1:8707000-8707019 | MS.gene20246:CDS | 45.0% | |
| CTACGTCTTGAACAGCTTGA+CGG | + | chr5.1:8707742-8707761 | None:intergenic | 45.0% | |
| GAAAATAACTACGGCACCTG+CGG | - | chr5.1:8706243-8706262 | MS.gene20246:intron | 45.0% | |
| GAAACCATGAATCAGCCATG+AGG | + | chr5.1:8707720-8707739 | None:intergenic | 45.0% | |
| GAAGAAATGATAGGGCCTCA+TGG | - | chr5.1:8707702-8707721 | MS.gene20246:intron | 45.0% | |
| GAATTGGAACATGAAGCGGT+TGG | + | chr5.1:8705998-8706017 | None:intergenic | 45.0% | |
| GAGCTCTATCCAACAATGCT+TGG | - | chr5.1:8707849-8707868 | MS.gene20246:CDS | 45.0% | |
| GAGTTTCATGCGTATACGAG+TGG | - | chr5.1:8706265-8706284 | MS.gene20246:intron | 45.0% | |
| GATTATTCCATCCGGCCTAA+AGG | + | chr5.1:8707336-8707355 | None:intergenic | 45.0% | |
| GATTGTTCATCCTTGCTTCC+TGG | + | chr5.1:8706853-8706872 | None:intergenic | 45.0% | |
| GCATATACCAAACAGGTCCA+TGG | - | chr5.1:8706040-8706059 | MS.gene20246:intron | 45.0% | |
| GCCCATTTGTTCAACAGAGT+TGG | - | chr5.1:8708026-8708045 | MS.gene20246:CDS | 45.0% | |
| GCCTTTCTCTTACTACCTTC+AGG | + | chr5.1:8707584-8707603 | None:intergenic | 45.0% | |
| GCTCAGTCATGAAACCAAAC+GGG | + | chr5.1:8706170-8706189 | None:intergenic | 45.0% | |
| GCTGACAGTTGAGAAATTGG+TGG | + | chr5.1:8706938-8706957 | None:intergenic | 45.0% | |
| GCTTATCCATTCGTTACTGC+TGG | + | chr5.1:8706687-8706706 | None:intergenic | 45.0% | |
| GGCAGAAGAACTGAATTGAC+AGG | + | chr5.1:8706911-8706930 | None:intergenic | 45.0% | |
| GGGGATTTCTGCTATGTATG+TGG | - | chr5.1:8706380-8706399 | MS.gene20246:intron | 45.0% | |
| GGTCCTTGTCCCAATTTATC+AGG | + | chr5.1:8708105-8708124 | None:intergenic | 45.0% | |
| GTCAGCTACTCTAACAAAGG+TGG | - | chr5.1:8706952-8706971 | MS.gene20246:CDS | 45.0% | |
| GTGCTGCAGACCTGATAAAT+TGG | - | chr5.1:8708092-8708111 | MS.gene20246:CDS | 45.0% | |
| TATCCTCCGGAGTGAAGAAT+TGG | + | chr5.1:8706014-8706033 | None:intergenic | 45.0% | |
| TGCAACTGATAGAGAAGGGA+GGG | - | chr5.1:8707427-8707446 | MS.gene20246:CDS | 45.0% | |
| TTGCAACTGATAGAGAAGGG+AGG | - | chr5.1:8707426-8707445 | MS.gene20246:CDS | 45.0% | |
| TTTCTGCTCTGCACCTTTGT+TGG | + | chr5.1:8707035-8707054 | None:intergenic | 45.0% | |
| ! | AGTAGTGAAGCATTCGAGAC+TGG | + | chr5.1:8707894-8707913 | None:intergenic | 45.0% |
| ! | CATCGAAAGCCAAGCATTGT+TGG | + | chr5.1:8707861-8707880 | None:intergenic | 45.0% |
| ! | CCCATATCTCAGCTTTGTCT+AGG | + | chr5.1:8706131-8706150 | None:intergenic | 45.0% |
| ! | CTGTTTCTCCCAAGCTTAAC+AGG | - | chr5.1:8706770-8706789 | MS.gene20246:CDS | 45.0% |
| ! | TGAGGCAAGTCTAGTCTTCA+TGG | + | chr5.1:8705932-8705951 | None:intergenic | 45.0% |
| !! | TGAACAAATGGGCTGAACTC+GGG | + | chr5.1:8708019-8708038 | None:intergenic | 45.0% |
| !! | TGGAGGTTGACTGGTTTCTA+TGG | - | chr5.1:8707554-8707573 | MS.gene20246:CDS | 45.0% |
| AAGACCCAACTCTGTCTGAG+TGG | + | chr5.1:8706308-8706327 | None:intergenic | 50.0% | |
| AATGTGGCAGCCAGACAAAC+AGG | - | chr5.1:8705951-8705970 | MS.gene20246:intron | 50.0% | |
| ACAGGGGTTCCAGCAAATGT+AGG | + | chr5.1:8706728-8706747 | None:intergenic | 50.0% | |
| ACCTGCGTTCCTGTTAAGCT+TGG | + | chr5.1:8706782-8706801 | None:intergenic | 50.0% | |
| AGAAGACAAAGGAAGCGAGG+AGG | - | chr5.1:8707075-8707094 | MS.gene20246:CDS | 50.0% | |
| AGCTTAACAGGAACGCAGGT+TGG | - | chr5.1:8706782-8706801 | MS.gene20246:CDS | 50.0% | |
| CAAAGAGCCATGGACCTGTT+TGG | + | chr5.1:8706050-8706069 | None:intergenic | 50.0% | |
| CAGATGAAGCACACATCGCA+AGG | - | chr5.1:8706822-8706841 | MS.gene20246:CDS | 50.0% | |
| CAGTCAACCTCCATTTACCG+CGG | + | chr5.1:8707547-8707566 | None:intergenic | 50.0% | |
| CAGTCATGAAACCAAACGGG+AGG | + | chr5.1:8706167-8706186 | None:intergenic | 50.0% | |
| CATTGCTGTCAATGCTGAGC+AGG | - | chr5.1:8707144-8707163 | MS.gene20246:CDS | 50.0% | |
| CCTGCGTTCCTGTTAAGCTT+GGG | + | chr5.1:8706781-8706800 | None:intergenic | 50.0% | |
| CGTCAAGCTGTTCAAGACGT+AGG | - | chr5.1:8707740-8707759 | MS.gene20246:intron | 50.0% | |
| CTGGCAGCATCTGAGAAGAA+AGG | - | chr5.1:8707680-8707699 | MS.gene20246:intron | 50.0% | |
| GAAATGGGGACCAATGCTCA+AGG | - | chr5.1:8706469-8706488 | MS.gene20246:intron | 50.0% | |
| GCAACTGATAGAGAAGGGAG+GGG | - | chr5.1:8707428-8707447 | MS.gene20246:CDS | 50.0% | |
| GTATACGCATGAAACTCCGC+AGG | + | chr5.1:8706262-8706281 | None:intergenic | 50.0% | |
| GTTCCAATTCTTCACTCCGG+AGG | - | chr5.1:8706008-8706027 | MS.gene20246:intron | 50.0% | |
| TCTTAACCGGACCTTTAGGC+CGG | - | chr5.1:8707322-8707341 | MS.gene20246:CDS | 50.0% | |
| TGAAGCACACATCGCAAGGT+TGG | - | chr5.1:8706826-8706845 | MS.gene20246:CDS | 50.0% | |
| TGGAACTCAGCCTTGAGCAT+TGG | + | chr5.1:8706482-8706501 | None:intergenic | 50.0% | |
| TTGGCGACACCTACATTTGC+TGG | - | chr5.1:8706716-8706735 | MS.gene20246:intron | 50.0% | |
| TTTGTCTGGCTGCCACATTG+AGG | + | chr5.1:8705950-8705969 | None:intergenic | 50.0% | |
| ! | AGAAGTATGCAGGAGGTGCA+AGG | - | chr5.1:8706435-8706454 | MS.gene20246:intron | 50.0% |
| ! | CTTTTCTTCCACTGCTCTGC+TGG | + | chr5.1:8707822-8707841 | None:intergenic | 50.0% |
| ! | GAAGTATGCAGGAGGTGCAA+GGG | - | chr5.1:8706436-8706455 | MS.gene20246:intron | 50.0% |
| ! | GCAAATGTAGGTGTCGCCAA+AGG | + | chr5.1:8706716-8706735 | None:intergenic | 50.0% |
| ! | GCTTCATCTGACTCGTTGCT+AGG | + | chr5.1:8706812-8706831 | None:intergenic | 50.0% |
| ! | GCTTTAGGCTTCACGCTTCT+AGG | + | chr5.1:8706995-8707014 | None:intergenic | 50.0% |
| ! | TAACAGGAACGCAGGTTGGA+GGG | - | chr5.1:8706786-8706805 | MS.gene20246:CDS | 50.0% |
| ! | TTAACAGGAACGCAGGTTGG+AGG | - | chr5.1:8706785-8706804 | MS.gene20246:CDS | 50.0% |
| !! | AGATTCTGGTTCTGCGGTGT+TGG | + | chr5.1:8706752-8706771 | None:intergenic | 50.0% |
| !! | CTGCTCAGCATTGACAGCAA+TGG | + | chr5.1:8707146-8707165 | None:intergenic | 50.0% |
| AACCTCCATTTACCGCGGTC+AGG | + | chr5.1:8707542-8707561 | None:intergenic | 55.0% | |
| ACCTCCATTTACCGCGGTCA+GGG | + | chr5.1:8707541-8707560 | None:intergenic | 55.0% | |
| ACGAGCCACTCAGACAGAGT+TGG | - | chr5.1:8706300-8706319 | MS.gene20246:intron | 55.0% | |
| ACTGATAGAGAAGGGAGGGG+AGG | - | chr5.1:8707431-8707450 | MS.gene20246:CDS | 55.0% | |
| ATGACCCTGACCGCGGTAAA+TGG | - | chr5.1:8707534-8707553 | MS.gene20246:CDS | 55.0% | |
| ATGGTTGCGTGACAGTGGTG+CGG | - | chr5.1:8706532-8706551 | MS.gene20246:intron | 55.0% | |
| CAAAGCTGCCTGTGCTAGTC+TGG | + | chr5.1:8706502-8706521 | None:intergenic | 55.0% | |
| CCCAAGCTTAACAGGAACGC+AGG | - | chr5.1:8706778-8706797 | MS.gene20246:CDS | 55.0% | |
| CGAGCCACTCAGACAGAGTT+GGG | - | chr5.1:8706301-8706320 | MS.gene20246:intron | 55.0% | |
| CGCGGTAAATGGAGGTTGAC+TGG | - | chr5.1:8707545-8707564 | MS.gene20246:CDS | 55.0% | |
| GACTAGCACAGGCAGCTTTG+AGG | - | chr5.1:8706502-8706521 | MS.gene20246:intron | 55.0% | |
| GCTGAGTTCCAGACTAGCAC+AGG | - | chr5.1:8706491-8706510 | MS.gene20246:intron | 55.0% | |
| GGTAGGGGAAGAGGTAGTCA+AGG | - | chr5.1:8706557-8706576 | MS.gene20246:intron | 55.0% | |
| TGACAGTGGTGCGGAAGGTA+GGG | - | chr5.1:8706541-8706560 | MS.gene20246:intron | 55.0% | |
| TTCCATCCGGCCTAAAGGTC+CGG | + | chr5.1:8707331-8707350 | None:intergenic | 55.0% | |
| TTTAGGCACCAGCAGAGCAG+TGG | - | chr5.1:8707811-8707830 | MS.gene20246:CDS | 55.0% | |
| ! | AATGGCGGAGCCTGCTAATC+AGG | - | chr5.1:8707222-8707241 | MS.gene20246:CDS | 55.0% |
| ! | ACACATCGCAAGGTTGGTCC+AGG | - | chr5.1:8706832-8706851 | MS.gene20246:CDS | 55.0% |
| ! | AGCAGATCAGAGCGCTTGTC+GGG | - | chr5.1:8706187-8706206 | MS.gene20246:intron | 55.0% |
| ! | AGGGCCTCATGGCTGATTCA+TGG | - | chr5.1:8707713-8707732 | MS.gene20246:intron | 55.0% |
| ! | CAAGGTTGGTCCAGGAAGCA+AGG | - | chr5.1:8706840-8706859 | MS.gene20246:CDS | 55.0% |
| ! | GAAGCATTCGAGACTGGCAC+TGG | + | chr5.1:8707888-8707907 | None:intergenic | 55.0% |
| ! | GAGCAGATCAGAGCGCTTGT+CGG | - | chr5.1:8706186-8706205 | MS.gene20246:intron | 55.0% |
| ! | TATGCAGGAGGTGCAAGGGA+TGG | - | chr5.1:8706440-8706459 | MS.gene20246:intron | 55.0% |
| !! | GGTTCTGCGGTGTTGGTACA+GGG | + | chr5.1:8706745-8706764 | None:intergenic | 55.0% |
| !! | GTTCTGCGGTGTTGGTACAG+GGG | + | chr5.1:8706744-8706763 | None:intergenic | 55.0% |
| !! | TGGTTCTGCGGTGTTGGTAC+AGG | + | chr5.1:8706746-8706765 | None:intergenic | 55.0% |
| AACCGGACCTTTAGGCCGGA+TGG | - | chr5.1:8707326-8707345 | MS.gene20246:CDS | 60.0% | |
| ACCCTGACCGCGGTAAATGG+AGG | - | chr5.1:8707537-8707556 | MS.gene20246:CDS | 60.0% | |
| AGCTGGAACTGTCGGGGTCT+CGG | - | chr5.1:8707269-8707288 | MS.gene20246:CDS | 60.0% | |
| GAAGTGGATGACCCTGACCG+CGG | - | chr5.1:8707527-8707546 | MS.gene20246:CDS | 60.0% | |
| GACAGTGGTGCGGAAGGTAG+GGG | - | chr5.1:8706542-8706561 | MS.gene20246:intron | 60.0% | |
| GATAGAGAAGGGAGGGGAGG+TGG | - | chr5.1:8707434-8707453 | MS.gene20246:CDS | 60.0% | |
| GCGCTTGTCGGGAACCACAT+CGG | - | chr5.1:8706198-8706217 | MS.gene20246:intron | 60.0% | |
| GTGACAGTGGTGCGGAAGGT+AGG | - | chr5.1:8706540-8706559 | MS.gene20246:intron | 60.0% | |
| TTGCGTGACAGTGGTGCGGA+AGG | - | chr5.1:8706536-8706555 | MS.gene20246:intron | 60.0% | |
| ! | TCTTGGCGGGCCTGATTAGC+AGG | + | chr5.1:8707235-8707254 | None:intergenic | 60.0% |
| GGTGCGGAAGGTAGGGGAAG+AGG | - | chr5.1:8706548-8706567 | MS.gene20246:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 8705835 | 8708152 | 8705835 | ID=MS.gene20246 |
| chr5.1 | mRNA | 8705835 | 8708152 | 8705835 | ID=MS.gene20246.t1;Parent=MS.gene20246 |
| chr5.1 | exon | 8707760 | 8708152 | 8707760 | ID=MS.gene20246.t1.exon1;Parent=MS.gene20246.t1 |
| chr5.1 | CDS | 8707760 | 8708152 | 8707760 | ID=cds.MS.gene20246.t1;Parent=MS.gene20246.t1 |
| chr5.1 | exon | 8706768 | 8707670 | 8706768 | ID=MS.gene20246.t1.exon2;Parent=MS.gene20246.t1 |
| chr5.1 | CDS | 8706768 | 8707670 | 8706768 | ID=cds.MS.gene20246.t1;Parent=MS.gene20246.t1 |
| chr5.1 | exon | 8705835 | 8705960 | 8705835 | ID=MS.gene20246.t1.exon3;Parent=MS.gene20246.t1 |
| chr5.1 | CDS | 8705835 | 8705960 | 8705835 | ID=cds.MS.gene20246.t1;Parent=MS.gene20246.t1 |
| Gene Sequence |
| Protein sequence |
