Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022929.t1 | AES70414.1 | 51.1 | 331 | 96 | 3 | 1 | 331 | 1 | 265 | 8.80E-83 | 317.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022929.t1 | O04244 | 27.2 | 136 | 95 | 2 | 83 | 216 | 6 | 139 | 2.5e-09 | 64.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022929.t1 | G7J017 | 51.1 | 331 | 96 | 3 | 1 | 331 | 1 | 265 | 6.3e-83 | 317.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022929.t1 | MTR_3g053920 | 52.303 | 304 | 79 | 3 | 1 | 304 | 1 | 238 | 6.41e-105 | 310 |
MS.gene022929.t1 | MTR_2g061500 | 74.419 | 129 | 33 | 0 | 1 | 129 | 1 | 129 | 9.63e-69 | 213 |
MS.gene022929.t1 | MTR_7g011710 | 84.706 | 85 | 13 | 0 | 55 | 139 | 1 | 85 | 6.44e-47 | 157 |
MS.gene022929.t1 | MTR_4g103530 | 68.000 | 100 | 30 | 1 | 55 | 154 | 1 | 98 | 5.20e-43 | 148 |
MS.gene022929.t1 | MTR_6g033215 | 34.503 | 171 | 110 | 1 | 31 | 199 | 124 | 294 | 5.97e-34 | 127 |
MS.gene022929.t1 | MTR_0010s0370 | 32.386 | 176 | 117 | 1 | 4 | 177 | 2 | 177 | 2.36e-26 | 104 |
MS.gene022929.t1 | MTR_0010s0350 | 32.386 | 176 | 117 | 1 | 4 | 177 | 2 | 177 | 2.36e-26 | 104 |
MS.gene022929.t1 | MTR_1g036720 | 32.692 | 104 | 68 | 1 | 11 | 112 | 7 | 110 | 3.64e-13 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022929.t1 | AT2G17920 | 25.352 | 213 | 153 | 3 | 8 | 216 | 9 | 219 | 3.75e-18 | 84.3 |
MS.gene022929.t1 | AT5G36228 | 27.461 | 193 | 136 | 2 | 36 | 226 | 39 | 229 | 4.59e-17 | 82.0 |
MS.gene022929.t1 | AT2G41590 | 26.829 | 164 | 116 | 2 | 55 | 216 | 58 | 219 | 5.18e-16 | 79.0 |
MS.gene022929.t1 | AT3G57587 | 28.667 | 150 | 99 | 4 | 71 | 216 | 74 | 219 | 5.89e-16 | 78.6 |
MS.gene022929.t1 | AT3G31430 | 27.174 | 184 | 124 | 4 | 36 | 215 | 134 | 311 | 3.73e-14 | 73.2 |
MS.gene022929.t1 | AT2G02103 | 26.220 | 164 | 117 | 2 | 55 | 216 | 58 | 219 | 1.04e-13 | 72.4 |
MS.gene022929.t1 | AT2G13450 | 25.683 | 183 | 132 | 2 | 35 | 215 | 38 | 218 | 1.08e-13 | 72.0 |
MS.gene022929.t1 | AT5G25200 | 25.610 | 164 | 118 | 2 | 55 | 216 | 58 | 219 | 1.09e-13 | 72.0 |
MS.gene022929.t1 | AT5G18636 | 25.610 | 164 | 118 | 2 | 55 | 216 | 58 | 219 | 1.14e-13 | 72.0 |
MS.gene022929.t1 | AT3G47920 | 26.000 | 150 | 103 | 4 | 71 | 216 | 3 | 148 | 3.62e-12 | 67.0 |
MS.gene022929.t1 | AT4G02000 | 27.206 | 136 | 95 | 2 | 83 | 216 | 6 | 139 | 1.79e-11 | 65.1 |
Find 112 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGATGACGGCGTTCGTAAT+TGG | 0.151505 | 7.4:+47577123 | MS.gene022929:CDS |
CAGACTCAGTGGCGAGGTTT+AGG | 0.233947 | 7.4:-47576512 | None:intergenic |
ATCCTTAAGCCATTTGTTAT+TGG | 0.253429 | 7.4:-47577189 | None:intergenic |
AGCAGCAGGCATGGGAGCTT+GGG | 0.266517 | 7.4:-47577243 | None:intergenic |
TTTGGCTGATCGTGAGATTC+AGG | 0.308864 | 7.4:+47576575 | MS.gene022929:CDS |
TTTGGCTGATTACAACAAAA+AGG | 0.311916 | 7.4:-47576843 | None:intergenic |
CAGCAGCAGGCATGGGAGCT+TGG | 0.315778 | 7.4:-47577244 | None:intergenic |
AGACTCAGTGGCGAGGTTTA+GGG | 0.329947 | 7.4:-47576511 | None:intergenic |
AAACCGGTTGCTTCTCGTAT+TGG | 0.332821 | 7.4:+47577158 | MS.gene022929:CDS |
CCCTCAAGTCTCAATATTGC+TGG | 0.350835 | 7.4:+47576462 | MS.gene022929:CDS |
TGATGACGGCGTTCGTAATT+GGG | 0.361931 | 7.4:+47577124 | MS.gene022929:CDS |
CCAAATGTTGGTCAGGGTAT+AGG | 0.371467 | 7.4:+47576861 | MS.gene022929:CDS |
ACCTGAACCATATGGACATC+TGG | 0.375036 | 7.4:+47576802 | MS.gene022929:CDS |
CAAGCTCCCATGCCTGCTGC+TGG | 0.379709 | 7.4:+47577245 | MS.gene022929:CDS |
GACATCTGGGTTCAGGTTCA+TGG | 0.384445 | 7.4:+47576816 | MS.gene022929:CDS |
AGCCATACGCTCGCTGAAAT+AGG | 0.391985 | 7.4:-47576601 | None:intergenic |
CCCAGATGTCCATATGGTTC+AGG | 0.402215 | 7.4:-47576803 | None:intergenic |
CCTATACCCTGACCAACATT+TGG | 0.404583 | 7.4:-47576861 | None:intergenic |
CCATATGGACATCTGGGTTC+AGG | 0.407479 | 7.4:+47576809 | MS.gene022929:CDS |
TTGCCCGGACTTGTTCGAAT+TGG | 0.408985 | 7.4:+47577097 | MS.gene022929:CDS |
TAATCAGCCAAATGTTGGTC+AGG | 0.412014 | 7.4:+47576854 | MS.gene022929:CDS |
CTGTTTGGTAGGACGTGTTT+TGG | 0.412271 | 7.4:+47576557 | MS.gene022929:CDS |
CACCATCCTCGATCACTGTT+TGG | 0.415170 | 7.4:+47576542 | MS.gene022929:CDS |
GAGGATGACCAGGATGTTAC+GGG | 0.426442 | 7.4:+47577533 | MS.gene022929:CDS |
ATGGCTCGTGCTTGGAAGCC+AGG | 0.426942 | 7.4:+47576618 | MS.gene022929:CDS |
AAGTGCTGTGGATGGTATTA+CGG | 0.434613 | 7.4:-47576917 | None:intergenic |
GCAGGTAAACCGAGCACCAC+TGG | 0.435384 | 7.4:-47577485 | None:intergenic |
TGAAAGTTGCGGCCAGCAGC+AGG | 0.439396 | 7.4:-47577257 | None:intergenic |
TGCCAATAACAAATGGCTTA+AGG | 0.440251 | 7.4:+47577187 | MS.gene022929:CDS |
TTGCGGCCAGCAGCAGGCAT+GGG | 0.441899 | 7.4:-47577251 | None:intergenic |
TGAGGATGACCAGGATGTTA+CGG | 0.444088 | 7.4:+47577532 | MS.gene022929:CDS |
ACAATAGAGACTCGCTTGCC+TGG | 0.445919 | 7.4:-47576636 | None:intergenic |
ATCTGTCGACCTGAACCATA+TGG | 0.449199 | 7.4:+47576794 | MS.gene022929:CDS |
GCTTCCAATTCGAACAAGTC+CGG | 0.452234 | 7.4:-47577101 | None:intergenic |
GAAGCAACCGGTTTCAGATC+AGG | 0.453087 | 7.4:-47577149 | None:intergenic |
GTCTCTATTGTCAAAACTGA+TGG | 0.462232 | 7.4:+47576648 | MS.gene022929:CDS |
CAGGGTATAGGTAGCTATCT+AGG | 0.468939 | 7.4:+47576873 | MS.gene022929:CDS |
TCAGATTCCTCACTTGTAAA+CGG | 0.473482 | 7.4:-47577512 | None:intergenic |
CCTGAACCCAGATGTCCATA+TGG | 0.477535 | 7.4:-47576809 | None:intergenic |
GTTGCGGCCAGCAGCAGGCA+TGG | 0.478318 | 7.4:-47577252 | None:intergenic |
CCGGGCAAACCTTGTCTGAA+TGG | 0.485324 | 7.4:-47577082 | None:intergenic |
CCAGCAATATTGAGACTTGA+GGG | 0.485345 | 7.4:-47576462 | None:intergenic |
TGTTACAGGTGCGGACTGCT+TGG | 0.488132 | 7.4:+47577059 | MS.gene022929:CDS |
TGCCTATTTCAGCGAGCGTA+TGG | 0.489265 | 7.4:+47576599 | MS.gene022929:CDS |
GCTGCCCGTGTTCTTGATGA+TGG | 0.490201 | 7.4:+47576708 | MS.gene022929:CDS |
CCATTCAGACAAGGTTTGCC+CGG | 0.499540 | 7.4:+47577082 | MS.gene022929:CDS |
GTCATGGACCGTATACAACC+TGG | 0.499758 | 7.4:+47576759 | MS.gene022929:CDS |
GTTCAGCTGCCAATAACAAA+TGG | 0.501013 | 7.4:+47577180 | MS.gene022929:CDS |
TGGTTCAGGTCGACAGATGT+AGG | 0.502239 | 7.4:-47576789 | None:intergenic |
GCGAGCGTATGGCTCGTGCT+TGG | 0.503834 | 7.4:+47576610 | MS.gene022929:CDS |
TGGAAAGTCCGTGTTAGTAC+TGG | 0.506120 | 7.4:+47576990 | MS.gene022929:CDS |
AGGTAAAAGATGCACTTGAC+AGG | 0.509394 | 7.4:-47577417 | None:intergenic |
GTTTGTCTCGGCACAACAGA+TGG | 0.513246 | 7.4:-47577218 | None:intergenic |
GCTGGCCGCAACTTTCATCC+AGG | 0.513777 | 7.4:+47577263 | MS.gene022929:CDS |
ACTAGCAACATGCTTCACTT+TGG | 0.515126 | 7.4:-47577384 | None:intergenic |
GAAAATTATCATACAGCCAT+GGG | 0.515399 | 7.4:-47576731 | None:intergenic |
TTGGGGACCTGATCTGAAAC+CGG | 0.517910 | 7.4:+47577142 | MS.gene022929:CDS |
GGACAACCCCAGGTTGTATA+CGG | 0.519072 | 7.4:-47576767 | None:intergenic |
ACAGGTTGCCCAGTGGTGCT+CGG | 0.520634 | 7.4:+47577476 | MS.gene022929:CDS |
TCACTTGTAAACGGAGCAGC+AGG | 0.527702 | 7.4:-47577503 | None:intergenic |
AAATTTAAGTATGAGAAACT+TGG | 0.529182 | 7.4:+47577029 | MS.gene022929:CDS |
TGGTTTAACCATTGCTGAAG+AGG | 0.530085 | 7.4:+47576482 | MS.gene022929:CDS |
CTTCCAATTCGAACAAGTCC+GGG | 0.531082 | 7.4:-47577100 | None:intergenic |
TCAGCTTCCACACTCATCAC+AGG | 0.531993 | 7.4:+47577458 | MS.gene022929:CDS |
TTCGAATTGGAAGCTGATGA+CGG | 0.535228 | 7.4:+47577110 | MS.gene022929:CDS |
GGAGCTTGGGGAGTTTGTCT+CGG | 0.539891 | 7.4:-47577230 | None:intergenic |
TGAAAATTATCATACAGCCA+TGG | 0.541083 | 7.4:-47576732 | None:intergenic |
TGAGGAATCTGAGGATGACC+AGG | 0.548864 | 7.4:+47577523 | MS.gene022929:CDS |
GGTTTAACCATTGCTGAAGA+GGG | 0.548896 | 7.4:+47576483 | MS.gene022929:CDS |
GAACCAATACGAGAAGCAAC+CGG | 0.551481 | 7.4:-47577161 | None:intergenic |
GCAGCAGGCATGGGAGCTTG+GGG | 0.551902 | 7.4:-47577242 | None:intergenic |
TGTTGTAATCAGCCAAATGT+TGG | 0.554828 | 7.4:+47576849 | MS.gene022929:CDS |
TCTCTATTGTCAAAACTGAT+GGG | 0.556196 | 7.4:+47576649 | MS.gene022929:CDS |
GTTCTGAACCCGTAACATCC+TGG | 0.558247 | 7.4:-47577541 | None:intergenic |
GGTTAAACCCTCTTCAGCAA+TGG | 0.558439 | 7.4:-47576490 | None:intergenic |
ACCAGCAATATTGAGACTTG+AGG | 0.558584 | 7.4:-47576463 | None:intergenic |
TTGAGACTTGAGGGATCCAT+AGG | 0.568944 | 7.4:-47576453 | None:intergenic |
GGTTCAGGTCGACAGATGTA+GGG | 0.573327 | 7.4:-47576788 | None:intergenic |
ATCCTCGATCACTGTTTGGT+AGG | 0.585067 | 7.4:+47576546 | MS.gene022929:CDS |
CAGGTAAACCGAGCACCACT+GGG | 0.586382 | 7.4:-47577484 | None:intergenic |
TCATGGACCGTATACAACCT+GGG | 0.587245 | 7.4:+47576760 | MS.gene022929:CDS |
ACCGCACTAGCAGCACCACC+TGG | 0.589399 | 7.4:-47577281 | None:intergenic |
TGCTGCTCCGTTTACAAGTG+AGG | 0.594642 | 7.4:+47577505 | MS.gene022929:CDS |
TTTGTCTCGGCACAACAGAT+GGG | 0.598784 | 7.4:-47577217 | None:intergenic |
CCTGAACCATATGGACATCT+GGG | 0.599548 | 7.4:+47576803 | MS.gene022929:CDS |
CAGAACTTAAGAAGAGGACG+AGG | 0.599784 | 7.4:+47577558 | MS.gene022929:CDS |
GATGACGGCGTTCGTAATTG+GGG | 0.605460 | 7.4:+47577125 | MS.gene022929:CDS |
GTGTTCTTGATGATGGCCCA+TGG | 0.605740 | 7.4:+47576715 | MS.gene022929:CDS |
CGGGTTCAGAACTTAAGAAG+AGG | 0.609884 | 7.4:+47577552 | MS.gene022929:CDS |
TACCAAACAGTGATCGAGGA+TGG | 0.611265 | 7.4:-47576544 | None:intergenic |
TCCAGGTGGTGCTGCTAGTG+CGG | 0.614412 | 7.4:+47577280 | MS.gene022929:CDS |
CGTAATCACCAGTACTAACA+CGG | 0.615539 | 7.4:-47576998 | None:intergenic |
ACTGCTTGGCCATTCAGACA+AGG | 0.615646 | 7.4:+47577073 | MS.gene022929:CDS |
CACCACCTGGATGAAAGTTG+CGG | 0.616021 | 7.4:-47577268 | None:intergenic |
CTCTATTGTCAAAACTGATG+GGG | 0.617557 | 7.4:+47576650 | MS.gene022929:CDS |
ACAGATGTAGGGACAACCCC+AGG | 0.618679 | 7.4:-47576777 | None:intergenic |
GGCCGCAACTTTCATCCAGG+TGG | 0.619748 | 7.4:+47577266 | MS.gene022929:CDS |
ATGGGCCATCATCAAGAACA+CGG | 0.622255 | 7.4:-47576713 | None:intergenic |
AAAGATGCACTTGACAGGTA+CGG | 0.627868 | 7.4:-47577412 | None:intergenic |
CAACATGCTTCACTTTGGCG+AGG | 0.630950 | 7.4:-47577379 | None:intergenic |
TCGCATATAAGTGCTGTGGA+TGG | 0.638243 | 7.4:-47576925 | None:intergenic |
CTCGGCACAACAGATGGGAT+AGG | 0.642910 | 7.4:-47577212 | None:intergenic |
AATCAGCCAAATGTTGGTCA+GGG | 0.647271 | 7.4:+47576855 | MS.gene022929:CDS |
GTTTACAAGTGAGGAATCTG+AGG | 0.651895 | 7.4:+47577514 | MS.gene022929:CDS |
TCAATCGCATATAAGTGCTG+TGG | 0.657243 | 7.4:-47576929 | None:intergenic |
TGGGCCATCATCAAGAACAC+GGG | 0.657924 | 7.4:-47576712 | None:intergenic |
GGTGTTAGTTTCAGACTCAG+TGG | 0.662728 | 7.4:-47576523 | None:intergenic |
GTCCTACCAAACAGTGATCG+AGG | 0.664033 | 7.4:-47576548 | None:intergenic |
CATGGACCGTATACAACCTG+GGG | 0.669644 | 7.4:+47576761 | MS.gene022929:CDS |
TAGTTTCAGACTCAGTGGCG+AGG | 0.677757 | 7.4:-47576518 | None:intergenic |
TGGGCAACCTGTGATGAGTG+TGG | 0.688147 | 7.4:-47577465 | None:intergenic |
ACTCATCACAGGTTGCCCAG+TGG | 0.753003 | 7.4:+47577469 | MS.gene022929:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTTAAGTATGAGAAACT+TGG | + | chr7.4:47577029-47577048 | MS.gene022929:CDS | 20.0% |
!!! | TGATAATTTTCATATTGTCA+TGG | + | chr7.4:47576743-47576762 | MS.gene022929:CDS | 20.0% |
!!! | AACTTGGTATTTTTTGTTAC+AGG | + | chr7.4:47577045-47577064 | MS.gene022929:CDS | 25.0% |
GAAAATTATCATACAGCCAT+GGG | - | chr7.4:47576734-47576753 | None:intergenic | 30.0% | |
TCTCTATTGTCAAAACTGAT+GGG | + | chr7.4:47576649-47576668 | MS.gene022929:CDS | 30.0% | |
TGAAAATTATCATACAGCCA+TGG | - | chr7.4:47576735-47576754 | None:intergenic | 30.0% | |
TTTGGCTGATTACAACAAAA+AGG | - | chr7.4:47576846-47576865 | None:intergenic | 30.0% | |
! | TACGGTCATCATAGATTTTA+AGG | - | chr7.4:47576902-47576921 | None:intergenic | 30.0% |
! | TTTTCAGTTCCACCATAAAA+TGG | + | chr7.4:47576683-47576702 | MS.gene022929:CDS | 30.0% |
!! | ATCCTTAAGCCATTTGTTAT+TGG | - | chr7.4:47577192-47577211 | None:intergenic | 30.0% |
!! | TTTTATGGTGGAACTGAAAA+AGG | - | chr7.4:47576683-47576702 | None:intergenic | 30.0% |
CTCTATTGTCAAAACTGATG+GGG | + | chr7.4:47576650-47576669 | MS.gene022929:CDS | 35.0% | |
GTCTCTATTGTCAAAACTGA+TGG | + | chr7.4:47576648-47576667 | MS.gene022929:CDS | 35.0% | |
TCAGATTCCTCACTTGTAAA+CGG | - | chr7.4:47577515-47577534 | None:intergenic | 35.0% | |
TGCCAATAACAAATGGCTTA+AGG | + | chr7.4:47577187-47577206 | MS.gene022929:CDS | 35.0% | |
TGTTGTAATCAGCCAAATGT+TGG | + | chr7.4:47576849-47576868 | MS.gene022929:CDS | 35.0% | |
!!! | ACTTTCCACTCTTTTTTCAG+TGG | - | chr7.4:47576978-47576997 | None:intergenic | 35.0% |
!!! | CTTTCCACTCTTTTTTCAGT+GGG | - | chr7.4:47576977-47576996 | None:intergenic | 35.0% |
!!! | GGTATTTTTTGTTACAGGTG+CGG | + | chr7.4:47577050-47577069 | MS.gene022929:CDS | 35.0% |
AAAGATGCACTTGACAGGTA+CGG | - | chr7.4:47577415-47577434 | None:intergenic | 40.0% | |
AATCAGCCAAATGTTGGTCA+GGG | + | chr7.4:47576855-47576874 | MS.gene022929:CDS | 40.0% | |
ACCAGCAATATTGAGACTTG+AGG | - | chr7.4:47576466-47576485 | None:intergenic | 40.0% | |
ACTAGCAACATGCTTCACTT+TGG | - | chr7.4:47577387-47577406 | None:intergenic | 40.0% | |
AGGTAAAAGATGCACTTGAC+AGG | - | chr7.4:47577420-47577439 | None:intergenic | 40.0% | |
CCAGCAATATTGAGACTTGA+GGG | - | chr7.4:47576465-47576484 | None:intergenic | 40.0% | |
CGTAATCACCAGTACTAACA+CGG | - | chr7.4:47577001-47577020 | None:intergenic | 40.0% | |
GGTGGAACTGAAAAAGGAAA+CGG | - | chr7.4:47576677-47576696 | None:intergenic | 40.0% | |
GGTTTAACCATTGCTGAAGA+GGG | + | chr7.4:47576483-47576502 | MS.gene022929:CDS | 40.0% | |
GTTCAGCTGCCAATAACAAA+TGG | + | chr7.4:47577180-47577199 | MS.gene022929:CDS | 40.0% | |
GTTTACAAGTGAGGAATCTG+AGG | + | chr7.4:47577514-47577533 | MS.gene022929:CDS | 40.0% | |
TAATCAGCCAAATGTTGGTC+AGG | + | chr7.4:47576854-47576873 | MS.gene022929:CDS | 40.0% | |
TGGTTTAACCATTGCTGAAG+AGG | + | chr7.4:47576482-47576501 | MS.gene022929:CDS | 40.0% | |
TTCGAATTGGAAGCTGATGA+CGG | + | chr7.4:47577110-47577129 | MS.gene022929:CDS | 40.0% | |
! | AAGTGCTGTGGATGGTATTA+CGG | - | chr7.4:47576920-47576939 | None:intergenic | 40.0% |
! | TCAATCGCATATAAGTGCTG+TGG | - | chr7.4:47576932-47576951 | None:intergenic | 40.0% |
!!! | CTTTTACCTTCTGTTTCTGC+AGG | + | chr7.4:47577431-47577450 | MS.gene022929:intron | 40.0% |
AAACCGGTTGCTTCTCGTAT+TGG | + | chr7.4:47577158-47577177 | MS.gene022929:CDS | 45.0% | |
ACCTGAACCATATGGACATC+TGG | + | chr7.4:47576802-47576821 | MS.gene022929:CDS | 45.0% | |
ATCCTCGATCACTGTTTGGT+AGG | + | chr7.4:47576546-47576565 | MS.gene022929:CDS | 45.0% | |
ATCTGTCGACCTGAACCATA+TGG | + | chr7.4:47576794-47576813 | MS.gene022929:CDS | 45.0% | |
ATGGGCCATCATCAAGAACA+CGG | - | chr7.4:47576716-47576735 | None:intergenic | 45.0% | |
CAGAACTTAAGAAGAGGACG+AGG | + | chr7.4:47577558-47577577 | MS.gene022929:CDS | 45.0% | |
CAGGGTATAGGTAGCTATCT+AGG | + | chr7.4:47576873-47576892 | MS.gene022929:CDS | 45.0% | |
CCAAATGTTGGTCAGGGTAT+AGG | + | chr7.4:47576861-47576880 | MS.gene022929:CDS | 45.0% | |
CCCTCAAGTCTCAATATTGC+TGG | + | chr7.4:47576462-47576481 | MS.gene022929:CDS | 45.0% | |
CCTATACCCTGACCAACATT+TGG | - | chr7.4:47576864-47576883 | None:intergenic | 45.0% | |
CCTGAACCATATGGACATCT+GGG | + | chr7.4:47576803-47576822 | MS.gene022929:CDS | 45.0% | |
CGGGTTCAGAACTTAAGAAG+AGG | + | chr7.4:47577552-47577571 | MS.gene022929:CDS | 45.0% | |
CTGTCCCACTGAAAAAAGAG+TGG | + | chr7.4:47576970-47576989 | MS.gene022929:CDS | 45.0% | |
CTTCCAATTCGAACAAGTCC+GGG | - | chr7.4:47577103-47577122 | None:intergenic | 45.0% | |
GAAAGTCCTGCAGAAACAGA+AGG | - | chr7.4:47577440-47577459 | None:intergenic | 45.0% | |
GAACCAATACGAGAAGCAAC+CGG | - | chr7.4:47577164-47577183 | None:intergenic | 45.0% | |
GCTTCCAATTCGAACAAGTC+CGG | - | chr7.4:47577104-47577123 | None:intergenic | 45.0% | |
GGTTAAACCCTCTTCAGCAA+TGG | - | chr7.4:47576493-47576512 | None:intergenic | 45.0% | |
TACCAAACAGTGATCGAGGA+TGG | - | chr7.4:47576547-47576566 | None:intergenic | 45.0% | |
TCATGGACCGTATACAACCT+GGG | + | chr7.4:47576760-47576779 | MS.gene022929:CDS | 45.0% | |
TGAGGATGACCAGGATGTTA+CGG | + | chr7.4:47577532-47577551 | MS.gene022929:CDS | 45.0% | |
TGGAAAGTCCGTGTTAGTAC+TGG | + | chr7.4:47576990-47577009 | MS.gene022929:CDS | 45.0% | |
TTTGGCTGATCGTGAGATTC+AGG | + | chr7.4:47576575-47576594 | MS.gene022929:CDS | 45.0% | |
TTTGTCTCGGCACAACAGAT+GGG | - | chr7.4:47577220-47577239 | None:intergenic | 45.0% | |
! | CTGTTTGGTAGGACGTGTTT+TGG | + | chr7.4:47576557-47576576 | MS.gene022929:CDS | 45.0% |
! | GGTGTTAGTTTCAGACTCAG+TGG | - | chr7.4:47576526-47576545 | None:intergenic | 45.0% |
! | TCGCATATAAGTGCTGTGGA+TGG | - | chr7.4:47576928-47576947 | None:intergenic | 45.0% |
!! | TGATGACGGCGTTCGTAATT+GGG | + | chr7.4:47577124-47577143 | MS.gene022929:CDS | 45.0% |
ACAATAGAGACTCGCTTGCC+TGG | - | chr7.4:47576639-47576658 | None:intergenic | 50.0% | |
ACTGCTTGGCCATTCAGACA+AGG | + | chr7.4:47577073-47577092 | MS.gene022929:CDS | 50.0% | |
AGACTCAGTGGCGAGGTTTA+GGG | - | chr7.4:47576514-47576533 | None:intergenic | 50.0% | |
AGCCATACGCTCGCTGAAAT+AGG | - | chr7.4:47576604-47576623 | None:intergenic | 50.0% | |
CAACATGCTTCACTTTGGCG+AGG | - | chr7.4:47577382-47577401 | None:intergenic | 50.0% | |
CACCACCTGGATGAAAGTTG+CGG | - | chr7.4:47577271-47577290 | None:intergenic | 50.0% | |
CACCATCCTCGATCACTGTT+TGG | + | chr7.4:47576542-47576561 | MS.gene022929:CDS | 50.0% | |
CATGGACCGTATACAACCTG+GGG | + | chr7.4:47576761-47576780 | MS.gene022929:CDS | 50.0% | |
CCATATGGACATCTGGGTTC+AGG | + | chr7.4:47576809-47576828 | MS.gene022929:CDS | 50.0% | |
CCATTCAGACAAGGTTTGCC+CGG | + | chr7.4:47577082-47577101 | MS.gene022929:CDS | 50.0% | |
CCCAGATGTCCATATGGTTC+AGG | - | chr7.4:47576806-47576825 | None:intergenic | 50.0% | |
CCTGAACCCAGATGTCCATA+TGG | - | chr7.4:47576812-47576831 | None:intergenic | 50.0% | |
GAGGATGACCAGGATGTTAC+GGG | + | chr7.4:47577533-47577552 | MS.gene022929:CDS | 50.0% | |
GGACAACCCCAGGTTGTATA+CGG | - | chr7.4:47576770-47576789 | None:intergenic | 50.0% | |
GGTTCAGGTCGACAGATGTA+GGG | - | chr7.4:47576791-47576810 | None:intergenic | 50.0% | |
GTCATGGACCGTATACAACC+TGG | + | chr7.4:47576759-47576778 | MS.gene022929:CDS | 50.0% | |
GTCCTACCAAACAGTGATCG+AGG | - | chr7.4:47576551-47576570 | None:intergenic | 50.0% | |
GTTTGTCTCGGCACAACAGA+TGG | - | chr7.4:47577221-47577240 | None:intergenic | 50.0% | |
TAGTTTCAGACTCAGTGGCG+AGG | - | chr7.4:47576521-47576540 | None:intergenic | 50.0% | |
TCACTTGTAAACGGAGCAGC+AGG | - | chr7.4:47577506-47577525 | None:intergenic | 50.0% | |
TCAGCTTCCACACTCATCAC+AGG | + | chr7.4:47577458-47577477 | MS.gene022929:CDS | 50.0% | |
TGAGGAATCTGAGGATGACC+AGG | + | chr7.4:47577523-47577542 | MS.gene022929:CDS | 50.0% | |
TGCCTATTTCAGCGAGCGTA+TGG | + | chr7.4:47576599-47576618 | MS.gene022929:CDS | 50.0% | |
TGCTGCTCCGTTTACAAGTG+AGG | + | chr7.4:47577505-47577524 | MS.gene022929:CDS | 50.0% | |
TGGGCCATCATCAAGAACAC+GGG | - | chr7.4:47576715-47576734 | None:intergenic | 50.0% | |
TGGTTCAGGTCGACAGATGT+AGG | - | chr7.4:47576792-47576811 | None:intergenic | 50.0% | |
! | CACGGGCAGCATCCATTTTA+TGG | - | chr7.4:47576698-47576717 | None:intergenic | 50.0% |
! | GAAGCAACCGGTTTCAGATC+AGG | - | chr7.4:47577152-47577171 | None:intergenic | 50.0% |
! | GACATCTGGGTTCAGGTTCA+TGG | + | chr7.4:47576816-47576835 | MS.gene022929:CDS | 50.0% |
! | GATGACGGCGTTCGTAATTG+GGG | + | chr7.4:47577125-47577144 | MS.gene022929:CDS | 50.0% |
! | GGGCAGCATCCATTTTATGG+TGG | - | chr7.4:47576695-47576714 | None:intergenic | 50.0% |
! | GTTCTGAACCCGTAACATCC+TGG | - | chr7.4:47577544-47577563 | None:intergenic | 50.0% |
! | TTGCCCGGACTTGTTCGAAT+TGG | + | chr7.4:47577097-47577116 | MS.gene022929:CDS | 50.0% |
! | TTGGGGACCTGATCTGAAAC+CGG | + | chr7.4:47577142-47577161 | MS.gene022929:CDS | 50.0% |
!! | CTGATGACGGCGTTCGTAAT+TGG | + | chr7.4:47577123-47577142 | MS.gene022929:CDS | 50.0% |
!! | GTGTTCTTGATGATGGCCCA+TGG | + | chr7.4:47576715-47576734 | MS.gene022929:CDS | 50.0% |
ACAGATGTAGGGACAACCCC+AGG | - | chr7.4:47576780-47576799 | None:intergenic | 55.0% | |
ACTCATCACAGGTTGCCCAG+TGG | + | chr7.4:47577469-47577488 | MS.gene022929:CDS | 55.0% | |
CAGACTCAGTGGCGAGGTTT+AGG | - | chr7.4:47576515-47576534 | None:intergenic | 55.0% | |
CAGGTAAACCGAGCACCACT+GGG | - | chr7.4:47577487-47577506 | None:intergenic | 55.0% | |
CCGGGCAAACCTTGTCTGAA+TGG | - | chr7.4:47577085-47577104 | None:intergenic | 55.0% | |
CTCGGCACAACAGATGGGAT+AGG | - | chr7.4:47577215-47577234 | None:intergenic | 55.0% | |
GCTGCCCGTGTTCTTGATGA+TGG | + | chr7.4:47576708-47576727 | MS.gene022929:CDS | 55.0% | |
GGAGCTTGGGGAGTTTGTCT+CGG | - | chr7.4:47577233-47577252 | None:intergenic | 55.0% | |
TGGGCAACCTGTGATGAGTG+TGG | - | chr7.4:47577468-47577487 | None:intergenic | 55.0% | |
! | TGTTACAGGTGCGGACTGCT+TGG | + | chr7.4:47577059-47577078 | MS.gene022929:CDS | 55.0% |
ACAGGTTGCCCAGTGGTGCT+CGG | + | chr7.4:47577476-47577495 | MS.gene022929:CDS | 60.0% | |
AGCAGCAGGCATGGGAGCTT+GGG | - | chr7.4:47577246-47577265 | None:intergenic | 60.0% | |
ATGGCTCGTGCTTGGAAGCC+AGG | + | chr7.4:47576618-47576637 | MS.gene022929:CDS | 60.0% | |
GCAGGTAAACCGAGCACCAC+TGG | - | chr7.4:47577488-47577507 | None:intergenic | 60.0% | |
GCTGGCCGCAACTTTCATCC+AGG | + | chr7.4:47577263-47577282 | MS.gene022929:CDS | 60.0% | |
GGCCGCAACTTTCATCCAGG+TGG | + | chr7.4:47577266-47577285 | MS.gene022929:CDS | 60.0% | |
TGAAAGTTGCGGCCAGCAGC+AGG | - | chr7.4:47577260-47577279 | None:intergenic | 60.0% | |
!! | TCCAGGTGGTGCTGCTAGTG+CGG | + | chr7.4:47577280-47577299 | MS.gene022929:CDS | 60.0% |
ACCGCACTAGCAGCACCACC+TGG | - | chr7.4:47577284-47577303 | None:intergenic | 65.0% | |
CAAGCTCCCATGCCTGCTGC+TGG | + | chr7.4:47577245-47577264 | MS.gene022929:CDS | 65.0% | |
CAGCAGCAGGCATGGGAGCT+TGG | - | chr7.4:47577247-47577266 | None:intergenic | 65.0% | |
GCAGCAGGCATGGGAGCTTG+GGG | - | chr7.4:47577245-47577264 | None:intergenic | 65.0% | |
GCGAGCGTATGGCTCGTGCT+TGG | + | chr7.4:47576610-47576629 | MS.gene022929:CDS | 65.0% | |
TTGCGGCCAGCAGCAGGCAT+GGG | - | chr7.4:47577254-47577273 | None:intergenic | 65.0% | |
GTTGCGGCCAGCAGCAGGCA+TGG | - | chr7.4:47577255-47577274 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 47576456 | 47577584 | 47576456 | ID=MS.gene022929 |
chr7.4 | mRNA | 47576456 | 47577584 | 47576456 | ID=MS.gene022929.t1;Parent=MS.gene022929 |
chr7.4 | exon | 47576456 | 47577424 | 47576456 | ID=MS.gene022929.t1.exon1;Parent=MS.gene022929.t1 |
chr7.4 | CDS | 47576456 | 47577424 | 47576456 | ID=cds.MS.gene022929.t1;Parent=MS.gene022929.t1 |
chr7.4 | exon | 47577453 | 47577584 | 47577453 | ID=MS.gene022929.t1.exon2;Parent=MS.gene022929.t1 |
chr7.4 | CDS | 47577453 | 47577584 | 47577453 | ID=cds.MS.gene022929.t1;Parent=MS.gene022929.t1 |
Gene Sequence |
Protein sequence |