AlfalfaGEDB | MS.gene049512

M. sativa cultivar XinJiangDaYe / MS.gene049512

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene049512.t1	GAU41105.1	69.8	242	73	0	1	242	1	242	5.20E-95	357.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene049512.t1	A0A2Z6NYN8	69.8	242	73	0	1	242	1	242	3.7e-95	357.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene049512	MS.gene61651	PPI
MS.gene049512	MS.gene29406	PPI
MS.gene83979	MS.gene049512	PPI
MS.gene016102	MS.gene049512	PPI
MS.gene46941	MS.gene049512	PPI
MS.gene85295	MS.gene049512	PPI
MS.gene049512	MS.gene016719	PPI
MS.gene049512	MS.gene88393	PPI
MS.gene049512	MS.gene054508	PPI
MS.gene47792	MS.gene049512	PPI
MS.gene46948	MS.gene049512	PPI
MS.gene049512	MS.gene053373	PPI
MS.gene012019	MS.gene049512	PPI
MS.gene049512	MS.gene041264	PPI
MS.gene049512	MS.gene35175	PPI
MS.gene049512	MS.gene63150	PPI
MS.gene93396	MS.gene049512	PPI
MS.gene049512	MS.gene44083	PPI
MS.gene049512	MS.gene072852	PPI
MS.gene05231	MS.gene049512	PPI
MS.gene049512	MS.gene65474	PPI
MS.gene049512	MS.gene025401	PPI
MS.gene049512	MS.gene015093	PPI
MS.gene010656	MS.gene049512	PPI
MS.gene000629	MS.gene049512	PPI
MS.gene049512	MS.gene06164	PPI
MS.gene049512	MS.gene50392	PPI
MS.gene049512	MS.gene22730	PPI
MS.gene049512	MS.gene032299	PPI
MS.gene049512	MS.gene017586	PPI
MS.gene05319	MS.gene049512	PPI
MS.gene049512	MS.gene037634	PPI
MS.gene049512	MS.gene057828	PPI
MS.gene049512	MS.gene071320	PPI
MS.gene56991	MS.gene049512	PPI
MS.gene050679	MS.gene049512	PPI
MS.gene049512	MS.gene08606	PPI
MS.gene049512	MS.gene000640	PPI
MS.gene20246	MS.gene049512	PPI
MS.gene055223	MS.gene049512	PPI
MS.gene049512	MS.gene09517	PPI
MS.gene049512	MS.gene98756	PPI
MS.gene049512	MS.gene87845	PPI
MS.gene053747	MS.gene049512	PPI
MS.gene049512	MS.gene85308	PPI
MS.gene049512	MS.gene64130	PPI
MS.gene65471	MS.gene049512	PPI
MS.gene049512	MS.gene62249	PPI
MS.gene061850	MS.gene049512	PPI
MS.gene049512	MS.gene024522	PPI
MS.gene049512	MS.gene046089	PPI
MS.gene049512	MS.gene010290	PPI
MS.gene049512	MS.gene053747	PPI
MS.gene049512	MS.gene92517	PPI
MS.gene049512	MS.gene021555	PPI
MS.gene049512	MS.gene36069	PPI
MS.gene049512	MS.gene71675	PPI
MS.gene049512	MS.gene044729	PPI
MS.gene98616	MS.gene049512	PPI
MS.gene049512	MS.gene60390	PPI
MS.gene049512	MS.gene039692	PPI
MS.gene69490	MS.gene049512	PPI
MS.gene049512	MS.gene55682	PPI
MS.gene049512	MS.gene002590	PPI
MS.gene049512	MS.gene81712	PPI
MS.gene015248	MS.gene049512	PPI
MS.gene049512	MS.gene008927	PPI
MS.gene44083	MS.gene049512	PPI
MS.gene049512	MS.gene23521	PPI
MS.gene049512	MS.gene005120	PPI
MS.gene013193	MS.gene049512	PPI
MS.gene08106	MS.gene049512	PPI
MS.gene049512	MS.gene65546	PPI
MS.gene049512	MS.gene024297	PPI
MS.gene049512	MS.gene059269	PPI
MS.gene049512	MS.gene057934	PPI
MS.gene049512	MS.gene024841	PPI
MS.gene049512	MS.gene069786	PPI
MS.gene23521	MS.gene049512	PPI
MS.gene049512	MS.gene42010	PPI
MS.gene049512	MS.gene025158	PPI
MS.gene049512	MS.gene40828	PPI
MS.gene049512	MS.gene87529	PPI
MS.gene049512	MS.gene51799	PPI
MS.gene049512	MS.gene98471	PPI
MS.gene87529	MS.gene049512	PPI
MS.gene012748	MS.gene049512	PPI
MS.gene04134	MS.gene049512	PPI
MS.gene062067	MS.gene049512	PPI
MS.gene049512	MS.gene40469	PPI
MS.gene57044	MS.gene049512	PPI
MS.gene049512	MS.gene09023	PPI
MS.gene049512	MS.gene025987	PPI
MS.gene049512	MS.gene95960	PPI
MS.gene049512	MS.gene043140	PPI
MS.gene038676	MS.gene049512	PPI
MS.gene049512	MS.gene71588	PPI
MS.gene049512	MS.gene61452	PPI
MS.gene049512	MS.gene03149	PPI
MS.gene042651	MS.gene049512	PPI
MS.gene049512	MS.gene29321	PPI
MS.gene049512	MS.gene018745	PPI
MS.gene049512	MS.gene037049	PPI
MS.gene049512	MS.gene24278	PPI
MS.gene049512	MS.gene000379	PPI
MS.gene049512	MS.gene34618	PPI
MS.gene049512	MS.gene59460	PPI
MS.gene049512	MS.gene060773	PPI
MS.gene049512	MS.gene66650	PPI
MS.gene049512	MS.gene009121	PPI
MS.gene049512	MS.gene08713	PPI
MS.gene049512	MS.gene70932	PPI
MS.gene049512	MS.gene024405	PPI
MS.gene071784	MS.gene049512	PPI
MS.gene049512	MS.gene021965	PPI
MS.gene049512	MS.gene24070	PPI
MS.gene049512	MS.gene059736	PPI
MS.gene42903	MS.gene049512	PPI
MS.gene049512	MS.gene58419	PPI
MS.gene049512	MS.gene26844	PPI
MS.gene049512	MS.gene64178	PPI
MS.gene049512	MS.gene074257	PPI
MS.gene049512	MS.gene073573	PPI
MS.gene048747	MS.gene049512	PPI
MS.gene049512	MS.gene44144	PPI
MS.gene042559	MS.gene049512	PPI
MS.gene22200	MS.gene049512	PPI
MS.gene049512	MS.gene05576	PPI
MS.gene049512	MS.gene060718	PPI
MS.gene049512	MS.gene63743	PPI
MS.gene26038	MS.gene049512	PPI
MS.gene049512	MS.gene48477	PPI
MS.gene049512	MS.gene027169	PPI
MS.gene049512	MS.gene004417	PPI
MS.gene049512	MS.gene019177	PPI
MS.gene031967	MS.gene049512	PPI
MS.gene34812	MS.gene049512	PPI
MS.gene02896	MS.gene049512	PPI
MS.gene063214	MS.gene049512	PPI
MS.gene32415	MS.gene049512	PPI
MS.gene049512	MS.gene055560	PPI
MS.gene049512	MS.gene009213	PPI
MS.gene035626	MS.gene049512	PPI
MS.gene049512	MS.gene98127	PPI
MS.gene049512	MS.gene35202	PPI
MS.gene049512	MS.gene003264	PPI
MS.gene049512	MS.gene054652	PPI
MS.gene067340	MS.gene049512	PPI
MS.gene049512	MS.gene000634	PPI
MS.gene049512	MS.gene37537	PPI
MS.gene65623	MS.gene049512	PPI
MS.gene049512	MS.gene86849	PPI
MS.gene71675	MS.gene049512	PPI
MS.gene69495	MS.gene049512	PPI
MS.gene049512	MS.gene27329	PPI
MS.gene038623	MS.gene049512	PPI
MS.gene049512	MS.gene41393	PPI
MS.gene05357	MS.gene049512	PPI
MS.gene032311	MS.gene049512	PPI
MS.gene049512	MS.gene89815	PPI
MS.gene049512	MS.gene016632	PPI
MS.gene049512	MS.gene018474	PPI
MS.gene049512	MS.gene86868	PPI
MS.gene86849	MS.gene049512	PPI
MS.gene049512	MS.gene058889	PPI
MS.gene049512	MS.gene96163	PPI
MS.gene049512	MS.gene65623	PPI
MS.gene049512	MS.gene012748	PPI
MS.gene049512	MS.gene02896	PPI
MS.gene021968	MS.gene049512	PPI
MS.gene09589	MS.gene049512	PPI
MS.gene049512	MS.gene34463	PPI
MS.gene43393	MS.gene049512	PPI
MS.gene34197	MS.gene049512	PPI
MS.gene049512	MS.gene042614	PPI
MS.gene049512	MS.gene026680	PPI
MS.gene049512	MS.gene61499	PPI
MS.gene049512	MS.gene51804	PPI
MS.gene049512	MS.gene019165	PPI
MS.gene049512	MS.gene81194	PPI
MS.gene048072	MS.gene049512	PPI
MS.gene060386	MS.gene049512	PPI
MS.gene71588	MS.gene049512	PPI
MS.gene04749	MS.gene049512	PPI
MS.gene049512	MS.gene038394	PPI
MS.gene05436	MS.gene049512	PPI
MS.gene049512	MS.gene019001	PPI
MS.gene059736	MS.gene049512	PPI
MS.gene049512	MS.gene53904	PPI
MS.gene35175	MS.gene049512	PPI
MS.gene049512	MS.gene73261	PPI
MS.gene049512	MS.gene85538	PPI
MS.gene049512	MS.gene025675	PPI
MS.gene049512	MS.gene055546	PPI
MS.gene021965	MS.gene049512	PPI
MS.gene055683	MS.gene049512	PPI
MS.gene049512	MS.gene71637	PPI
MS.gene049512	MS.gene55209	PPI
MS.gene049512	MS.gene96174	PPI
MS.gene049512	MS.gene28718	PPI
MS.gene049512	MS.gene022929	PPI
MS.gene049512	MS.gene85295	PPI
MS.gene049512	MS.gene068629	PPI
MS.gene94654	MS.gene049512	PPI
MS.gene049512	MS.gene009781	PPI
MS.gene049512	MS.gene047954	PPI
MS.gene049512	MS.gene048342	PPI
MS.gene049512	MS.gene069624	PPI
MS.gene97410	MS.gene049512	PPI
MS.gene83772	MS.gene049512	PPI
MS.gene049512	MS.gene21066	PPI
MS.gene049512	MS.gene013890	PPI
MS.gene008927	MS.gene049512	PPI
MS.gene049512	MS.gene073582	PPI
MS.gene045614	MS.gene049512	PPI
MS.gene96541	MS.gene049512	PPI
MS.gene63762	MS.gene049512	PPI
MS.gene049512	MS.gene028714	PPI
MS.gene049512	MS.gene042027	PPI
MS.gene049512	MS.gene048706	PPI
MS.gene30208	MS.gene049512	PPI
MS.gene049512	MS.gene69586	PPI
MS.gene049512	MS.gene45083	PPI
MS.gene025873	MS.gene049512	PPI
MS.gene049512	MS.gene049561	PPI
MS.gene049512	MS.gene008658	PPI
MS.gene013676	MS.gene049512	PPI
MS.gene049512	MS.gene80362	PPI
MS.gene049512	MS.gene49057	PPI
MS.gene05358	MS.gene049512	PPI
MS.gene049512	MS.gene03936	PPI
MS.gene030090	MS.gene049512	PPI
MS.gene95561	MS.gene049512	PPI
MS.gene049512	MS.gene048088	PPI
MS.gene018196	MS.gene049512	PPI
MS.gene065627	MS.gene049512	PPI
MS.gene049512	MS.gene08708	PPI
MS.gene57019	MS.gene049512	PPI
MS.gene018745	MS.gene049512	PPI
MS.gene049512	MS.gene86275	PPI
MS.gene049512	MS.gene034643	PPI
MS.gene038098	MS.gene049512	PPI
MS.gene60059	MS.gene049512	PPI
MS.gene049512	MS.gene012889	PPI
MS.gene049512	MS.gene038757	PPI
MS.gene049512	MS.gene000506	PPI
MS.gene28545	MS.gene049512	PPI
MS.gene049512	MS.gene39956	PPI
MS.gene008275	MS.gene049512	PPI
MS.gene049512	MS.gene028716	PPI
MS.gene049512	MS.gene74639	PPI
MS.gene049512	MS.gene071133	PPI
MS.gene049512	MS.gene60266	PPI
MS.gene049512	MS.gene98467	PPI
MS.gene049512	MS.gene013644	PPI
MS.gene064966	MS.gene049512	PPI
MS.gene049512	MS.gene54051	PPI
MS.gene049512	MS.gene22111	PPI
MS.gene049512	MS.gene049610	PPI
MS.gene049512	MS.gene37955	PPI
MS.gene049512	MS.gene34197	PPI
MS.gene049512	MS.gene045875	PPI
MS.gene049512	MS.gene010890	PPI
MS.gene049512	MS.gene84790	PPI
MS.gene049512	MS.gene061579	PPI
MS.gene046089	MS.gene049512	PPI
MS.gene047954	MS.gene049512	PPI
MS.gene036423	MS.gene049512	PPI
MS.gene049512	MS.gene41979	PPI
MS.gene049512	MS.gene04970	PPI
MS.gene049512	MS.gene26038	PPI
MS.gene049512	MS.gene060788	PPI
MS.gene049512	MS.gene43924	PPI
MS.gene72520	MS.gene049512	PPI
MS.gene049512	MS.gene41643	PPI
MS.gene049512	MS.gene77990	PPI
MS.gene66651	MS.gene049512	PPI
MS.gene96109	MS.gene049512	PPI
MS.gene049512	MS.gene062511	PPI
MS.gene049512	MS.gene008861	PPI
MS.gene049512	MS.gene027994	PPI
MS.gene35202	MS.gene049512	PPI
MS.gene051449	MS.gene049512	PPI
MS.gene049512	MS.gene26433	PPI
MS.gene049512	MS.gene007022	PPI
MS.gene049512	MS.gene045614	PPI
MS.gene049512	MS.gene69584	PPI
MS.gene049512	MS.gene52349	PPI
MS.gene049512	MS.gene021647	PPI
MS.gene049512	MS.gene76420	PPI
MS.gene049512	MS.gene46353	PPI
MS.gene049512	MS.gene65471	PPI
MS.gene049512	MS.gene071784	PPI
MS.gene30136	MS.gene049512	PPI
MS.gene008861	MS.gene049512	PPI
MS.gene61452	MS.gene049512	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene049512.t1	MTR_0010s0370	52.247	178	84	1	1	178	4	180	1.36e-61	192
MS.gene049512.t1	MTR_0010s0350	52.247	178	84	1	1	178	4	180	1.36e-61	192
MS.gene049512.t1	MTR_1g036720	47.222	108	56	1	1	108	4	110	9.65e-28	102
MS.gene049512.t1	MTR_6g033215	30.857	175	120	1	23	196	120	294	1.81e-27	107
MS.gene049512.t1	MTR_3g053920	38.849	139	68	2	31	169	35	156	4.49e-26	103
MS.gene049512.t1	MTR_7g089990	44.915	118	62	2	101	215	85	202	1.61e-24	97.8
MS.gene049512.t1	MTR_2g061500	41.304	92	54	0	32	123	36	127	2.65e-19	81.6
MS.gene049512.t1	MTR_4g103530	39.326	89	54	0	55	143	5	93	5.50e-17	77.0
MS.gene049512.t1	MTR_1g036710	60.938	64	24	1	130	192	1	64	1.15e-16	77.8
MS.gene049512.t1	MTR_7g106180	24.658	146	103	2	32	174	26	167	8.93e-13	66.2
MS.gene049512.t1	MTR_7g011710	32.955	88	59	0	51	138	1	88	9.22e-13	64.7
MS.gene049512.t1	MTR_3g024240	32.520	123	80	1	78	197	53	175	5.75e-12	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 61 sgRNAs with CRISPR-Local

Find 68 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGATTTCATCGGTGAGTTTA+AGG	0.198568	3.2:+57120905	MS.gene049512:CDS
AGGAGAAGATATCAGAATTT+TGG	0.244702	3.2:+57120631	MS.gene049512:CDS
TCTCCTTCATCATATGGTTT+CGG	0.331793	3.2:-57120614	None:intergenic
ATATCTTCTCCTTCATCATA+TGG	0.332832	3.2:-57120620	None:intergenic
AATGCCTTTGTTTCTTTCTA+CGG	0.339781	3.2:-57121214	None:intergenic
CCCTCAACCATGTACCCTAT+TGG	0.355933	3.2:+57120823	MS.gene049512:CDS
CAGGGTCCTTGGTCTTTAGA+TGG	0.366959	3.2:+57120747	MS.gene049512:CDS
CATCATATGGATTCGAGAAT+AGG	0.367591	3.2:-57121130	None:intergenic
TGTCTCTCAGATGAAAGAAT+TGG	0.385537	3.2:-57120707	None:intergenic
ATGATGATGGAGTCCGGTTA+TGG	0.387406	3.2:+57121147	MS.gene049512:CDS
CCTCAACCATGTACCCTATT+GGG	0.400791	3.2:+57120824	MS.gene049512:CDS
TTGATAGCCACTTTACAAAC+AGG	0.422812	3.2:-57120657	None:intergenic
CAGACCTTCGTGCAGATAAG+AGG	0.423821	3.2:+57121174	MS.gene049512:CDS
ATGCCTTTGTTTCTTTCTAC+GGG	0.434930	3.2:-57121213	None:intergenic
ATCTTCTTCATCCGCATCAA+TGG	0.437897	3.2:-57121002	None:intergenic
TCATGAACTTGCACCCAATA+GGG	0.455286	3.2:-57120837	None:intergenic
CTTGGTTGGGAGATTCTTGA+CGG	0.462561	3.2:+57120581	MS.gene049512:CDS
AACCGGACTCCATCATCATA+TGG	0.465139	3.2:-57121143	None:intergenic
TGTTATTACTGTGGCATGCT+CGG	0.466214	3.2:+57121083	MS.gene049512:CDS
CCCAATAGGGTACATGGTTG+AGG	0.473432	3.2:-57120824	None:intergenic
AACCATGCCCTATGCTTGGT+TGG	0.480596	3.2:+57120567	MS.gene049512:CDS
GAAGGTCTGAGCTCCATAAC+CGG	0.487520	3.2:-57121160	None:intergenic
GTCATGAACTTGCACCCAAT+AGG	0.488903	3.2:-57120838	None:intergenic
ACCATGCCCTATGCTTGGTT+GGG	0.491826	3.2:+57120568	MS.gene049512:CDS
TTGGCAACCTGTTTGTAAAG+TGG	0.492639	3.2:+57120650	MS.gene049512:CDS
TTTGTTTCTTTCTACGGGAG+AGG	0.496405	3.2:-57121208	None:intergenic
TGGTTGAGGGGAACCGTTGT+GGG	0.497894	3.2:-57120810	None:intergenic
ATTACGATTGTTGACTCTCC+AGG	0.502876	3.2:+57120531	MS.gene049512:CDS
GGTTGTATGTCGCAGACTGC+AGG	0.512770	3.2:+57120870	MS.gene049512:CDS
CTTGCACCCAATAGGGTACA+TGG	0.519598	3.2:-57120830	None:intergenic
TTCTCGAATCCATATGATGA+TGG	0.523932	3.2:+57121134	MS.gene049512:CDS
ATCCATATGATGATGGAGTC+CGG	0.525293	3.2:+57121141	MS.gene049512:CDS
CCAATAGGGTACATGGTTGA+GGG	0.528920	3.2:-57120823	None:intergenic
AGAAAACCATGCCCTATGCT+TGG	0.536606	3.2:+57120563	MS.gene049512:CDS
GGAACTTTCTGTTATTACTG+TGG	0.539075	3.2:+57121074	MS.gene049512:CDS
AGAATCTCCCAACCAAGCAT+AGG	0.542532	3.2:-57120575	None:intergenic
GAATCTCCCAACCAAGCATA+GGG	0.546866	3.2:-57120574	None:intergenic
CAGACTGCAGGAAAACAACT+TGG	0.548880	3.2:+57120882	MS.gene049512:CDS
AAGTTTAAATACGAAAAGCT+TGG	0.550223	3.2:+57121053	MS.gene049512:CDS
GATCCGAAACCATATGATGA+AGG	0.564674	3.2:+57120611	MS.gene049512:CDS
GTCTGCGACATACAACCGAC+AGG	0.573807	3.2:-57120864	None:intergenic
AAACAACTTGGTGATTTCAT+CGG	0.577524	3.2:+57120894	MS.gene049512:CDS
ATTCTTTCATCTGAGAGACA+TGG	0.586745	3.2:+57120710	MS.gene049512:CDS
ACGATTAACTATCGCAGAAG+AGG	0.589126	3.2:+57120494	MS.gene049512:CDS
GATGAAGAAGATCAAAGTGA+AGG	0.591922	3.2:+57121013	MS.gene049512:CDS
CAAGTTCATGACGTCCCTGT+CGG	0.592554	3.2:+57120849	MS.gene049512:CDS
TCATATGGTTTCGGATCAGA+CGG	0.592721	3.2:-57120605	None:intergenic
ATGAAGAAGATCAAAGTGAA+GGG	0.604827	3.2:+57121014	MS.gene049512:CDS
ATGGTTGAGGGGAACCGTTG+TGG	0.610307	3.2:-57120811	None:intergenic
ATTATCAGACTGCTTCAGCA+AGG	0.614610	3.2:+57120780	MS.gene049512:CDS
TCCCAACCAAGCATAGGGCA+TGG	0.623148	3.2:-57120569	None:intergenic
CTCTCCTCTTATCTGCACGA+AGG	0.637531	3.2:-57121178	None:intergenic
CAATAGGGTACATGGTTGAG+GGG	0.644707	3.2:-57120822	None:intergenic
GAGTCTTAGTTGATGTACGC+AGG	0.651454	3.2:+57120979	MS.gene049512:CDS
CTTCGTGCAGATAAGAGGAG+AGG	0.653327	3.2:+57121179	MS.gene049512:CDS
GCAAGGCAATGTTCCCACAA+CGG	0.663768	3.2:+57120797	MS.gene049512:CDS
ATGTACGCAGGCCATTGATG+CGG	0.664135	3.2:+57120991	MS.gene049512:CDS
ACTTTCTGAGCACATACATG+AGG	0.671475	3.2:+57120952	MS.gene049512:CDS
GTATGTCCATCTAAAGACCA+AGG	0.674234	3.2:-57120753	None:intergenic
TCTCCCGTAGAAAGAAACAA+AGG	0.696480	3.2:+57121210	MS.gene049512:CDS
TCTGCGACATACAACCGACA+GGG	0.729112	3.2:-57120863	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATTGGAAAAGAAAAAGATT+AGG	-	chr3.2:57120693-57120712	None:intergenic	20.0%
!!	ATTGGAAAAGAAAAAGATTA+GGG	-	chr3.2:57120692-57120711	None:intergenic	20.0%
!	AAGTTTAAATACGAAAAGCT+TGG	+	chr3.2:57121053-57121072	MS.gene049512:CDS	25.0%
	ATATCTTCTCCTTCATCATA+TGG	-	chr3.2:57120623-57120642	None:intergenic	30.0%
	ATGAAGAAGATCAAAGTGAA+GGG	+	chr3.2:57121014-57121033	MS.gene049512:CDS	30.0%
!	AAACAACTTGGTGATTTCAT+CGG	+	chr3.2:57120894-57120913	MS.gene049512:CDS	30.0%
!	AATGCCTTTGTTTCTTTCTA+CGG	-	chr3.2:57121217-57121236	None:intergenic	30.0%
!	AGGAGAAGATATCAGAATTT+TGG	+	chr3.2:57120631-57120650	MS.gene049512:CDS	30.0%
	ATTCTTTCATCTGAGAGACA+TGG	+	chr3.2:57120710-57120729	MS.gene049512:CDS	35.0%
	CATCATATGGATTCGAGAAT+AGG	-	chr3.2:57121133-57121152	None:intergenic	35.0%
	GATGAAGAAGATCAAAGTGA+AGG	+	chr3.2:57121013-57121032	MS.gene049512:CDS	35.0%
	GGAACTTTCTGTTATTACTG+TGG	+	chr3.2:57121074-57121093	MS.gene049512:CDS	35.0%
	TCTCCTTCATCATATGGTTT+CGG	-	chr3.2:57120617-57120636	None:intergenic	35.0%
	TGATTTCATCGGTGAGTTTA+AGG	+	chr3.2:57120905-57120924	MS.gene049512:CDS	35.0%
	TGTCTCTCAGATGAAAGAAT+TGG	-	chr3.2:57120710-57120729	None:intergenic	35.0%
	TTCTCGAATCCATATGATGA+TGG	+	chr3.2:57121134-57121153	MS.gene049512:CDS	35.0%
!	ATGCCTTTGTTTCTTTCTAC+GGG	-	chr3.2:57121216-57121235	None:intergenic	35.0%
!	TTGATAGCCACTTTACAAAC+AGG	-	chr3.2:57120660-57120679	None:intergenic	35.0%
!!!	ATGGAAAGAGTTTTGAAGCA+GGG	+	chr3.2:57120729-57120748	MS.gene049512:CDS	35.0%
	ACGATTAACTATCGCAGAAG+AGG	+	chr3.2:57120494-57120513	MS.gene049512:CDS	40.0%
	ACTTTCTGAGCACATACATG+AGG	+	chr3.2:57120952-57120971	MS.gene049512:CDS	40.0%
	ATCTTCTTCATCCGCATCAA+TGG	-	chr3.2:57121005-57121024	None:intergenic	40.0%
	ATTATCAGACTGCTTCAGCA+AGG	+	chr3.2:57120780-57120799	MS.gene049512:CDS	40.0%
	GATCCGAAACCATATGATGA+AGG	+	chr3.2:57120611-57120630	MS.gene049512:CDS	40.0%
	GTATGTCCATCTAAAGACCA+AGG	-	chr3.2:57120756-57120775	None:intergenic	40.0%
	TCATATGGTTTCGGATCAGA+CGG	-	chr3.2:57120608-57120627	None:intergenic	40.0%
	TCATGAACTTGCACCCAATA+GGG	-	chr3.2:57120840-57120859	None:intergenic	40.0%
	TCTCCCGTAGAAAGAAACAA+AGG	+	chr3.2:57121210-57121229	MS.gene049512:CDS	40.0%
	TGTTATTACTGTGGCATGCT+CGG	+	chr3.2:57121083-57121102	MS.gene049512:CDS	40.0%
	TTGGCAACCTGTTTGTAAAG+TGG	+	chr3.2:57120650-57120669	MS.gene049512:CDS	40.0%
!	ATAGGGCATGGTTTTCTTCT+TGG	-	chr3.2:57120560-57120579	None:intergenic	40.0%
!	TGGTTTTCTTCTTGGTTTCC+TGG	-	chr3.2:57120552-57120571	None:intergenic	40.0%
!	TTTGTTTCTTTCTACGGGAG+AGG	-	chr3.2:57121211-57121230	None:intergenic	40.0%
!!	ATCCATATGATGATGGAGTC+CGG	+	chr3.2:57121141-57121160	MS.gene049512:CDS	40.0%
!!	ATTACGATTGTTGACTCTCC+AGG	+	chr3.2:57120531-57120550	MS.gene049512:CDS	40.0%
!!!	CATGGAAAGAGTTTTGAAGC+AGG	+	chr3.2:57120728-57120747	MS.gene049512:CDS	40.0%
	AACCGGACTCCATCATCATA+TGG	-	chr3.2:57121146-57121165	None:intergenic	45.0%
	AGAAAACCATGCCCTATGCT+TGG	+	chr3.2:57120563-57120582	MS.gene049512:CDS	45.0%
	AGAATCTCCCAACCAAGCAT+AGG	-	chr3.2:57120578-57120597	None:intergenic	45.0%
	CAATAGGGTACATGGTTGAG+GGG	-	chr3.2:57120825-57120844	None:intergenic	45.0%
	CAGACTGCAGGAAAACAACT+TGG	+	chr3.2:57120882-57120901	MS.gene049512:CDS	45.0%
	CCAATAGGGTACATGGTTGA+GGG	-	chr3.2:57120826-57120845	None:intergenic	45.0%
	CCTCAACCATGTACCCTATT+GGG	+	chr3.2:57120824-57120843	MS.gene049512:CDS	45.0%
	CTTGGTTGGGAGATTCTTGA+CGG	+	chr3.2:57120581-57120600	MS.gene049512:CDS	45.0%
	GAATCTCCCAACCAAGCATA+GGG	-	chr3.2:57120577-57120596	None:intergenic	45.0%
	GTCATGAACTTGCACCCAAT+AGG	-	chr3.2:57120841-57120860	None:intergenic	45.0%
!	GAGTCTTAGTTGATGTACGC+AGG	+	chr3.2:57120979-57120998	MS.gene049512:CDS	45.0%
!!	ATGATGATGGAGTCCGGTTA+TGG	+	chr3.2:57121147-57121166	MS.gene049512:CDS	45.0%
	AACCATGCCCTATGCTTGGT+TGG	+	chr3.2:57120567-57120586	MS.gene049512:CDS	50.0%
	ACCATGCCCTATGCTTGGTT+GGG	+	chr3.2:57120568-57120587	MS.gene049512:CDS	50.0%
	ATGTACGCAGGCCATTGATG+CGG	+	chr3.2:57120991-57121010	MS.gene049512:CDS	50.0%
	CAAGTTCATGACGTCCCTGT+CGG	+	chr3.2:57120849-57120868	MS.gene049512:CDS	50.0%
	CAGACCTTCGTGCAGATAAG+AGG	+	chr3.2:57121174-57121193	MS.gene049512:CDS	50.0%
	CCCAATAGGGTACATGGTTG+AGG	-	chr3.2:57120827-57120846	None:intergenic	50.0%
	CCCTCAACCATGTACCCTAT+TGG	+	chr3.2:57120823-57120842	MS.gene049512:CDS	50.0%
	CTCTCCTCTTATCTGCACGA+AGG	-	chr3.2:57121181-57121200	None:intergenic	50.0%
	CTTCGTGCAGATAAGAGGAG+AGG	+	chr3.2:57121179-57121198	MS.gene049512:CDS	50.0%
	CTTGCACCCAATAGGGTACA+TGG	-	chr3.2:57120833-57120852	None:intergenic	50.0%
	GAAGGTCTGAGCTCCATAAC+CGG	-	chr3.2:57121163-57121182	None:intergenic	50.0%
	GCAAGGCAATGTTCCCACAA+CGG	+	chr3.2:57120797-57120816	MS.gene049512:CDS	50.0%
	TCTGCGACATACAACCGACA+GGG	-	chr3.2:57120866-57120885	None:intergenic	50.0%
!	CAGGGTCCTTGGTCTTTAGA+TGG	+	chr3.2:57120747-57120766	MS.gene049512:CDS	50.0%
!!!	GAGTTTTGAAGCAGGGTCCT+TGG	+	chr3.2:57120736-57120755	MS.gene049512:CDS	50.0%
	ATGGTTGAGGGGAACCGTTG+TGG	-	chr3.2:57120814-57120833	None:intergenic	55.0%
	GGTTGTATGTCGCAGACTGC+AGG	+	chr3.2:57120870-57120889	MS.gene049512:CDS	55.0%
	GTCTGCGACATACAACCGAC+AGG	-	chr3.2:57120867-57120886	None:intergenic	55.0%
	TCCCAACCAAGCATAGGGCA+TGG	-	chr3.2:57120572-57120591	None:intergenic	55.0%
	TGGTTGAGGGGAACCGTTGT+GGG	-	chr3.2:57120813-57120832	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.2	gene	57120489	57121238	57120489	ID=MS.gene049512
chr3.2	mRNA	57120489	57121238	57120489	ID=MS.gene049512.t1;Parent=MS.gene049512
chr3.2	exon	57120489	57121238	57120489	ID=MS.gene049512.t1.exon1;Parent=MS.gene049512.t1
chr3.2	CDS	57120489	57121238	57120489	ID=cds.MS.gene049512.t1;Parent=MS.gene049512.t1

Gene Sequence

>MS.gene049512

ATGGAACGATTAACTATCGCAGAAGAGGAAGACGAAATCGAGATTACGATTGTTGACTCTCCAGGAAACCAAGAAGAAAACCATGCCCTATGCTTGGTTGGGAGATTCTTGACGGACCGTCTGATCCGAAACCATATGATGAAGGAGAAGATATCAGAATTTTGGCAACCTGTTTGTAAAGTGGCTATCAAAGAGATTAACCCTAATCTTTTTCTTTTCCAATTCTTTCATCTGAGAGACATGGAAAGAGTTTTGAAGCAGGGTCCTTGGTCTTTAGATGGACATACTTTGATTATCAGACTGCTTCAGCAAGGCAATGTTCCCACAACGGTTCCCCTCAACCATGTACCCTATTGGGTGCAAGTTCATGACGTCCCTGTCGGTTGTATGTCGCAGACTGCAGGAAAACAACTTGGTGATTTCATCGGTGAGTTTAAGGAATATGATGAAAAAAATAACTCTAACTTTCTGAGCACATACATGAGGATACGAGTCTTAGTTGATGTACGCAGGCCATTGATGCGGATGAAGAAGATCAAAGTGAAGGGAAACTCTCACGAAGTCAAGTTTAAATACGAAAAGCTTGGAACTTTCTGTTATTACTGTGGCATGCTCGGACACATAGAAGATTTCTGCAAGAGCCTATTCTCGAATCCATATGATGATGGAGTCCGGTTATGGAGCTCAGACCTTCGTGCAGATAAGAGGAGAGGAGCAGACCTCTCCCGTAGAAAGAAACAAAGGCATTAA

Protein sequence

>MS.gene049512.t1

MERLTIAEEEDEIEITIVDSPGNQEENHALCLVGRFLTDRLIRNHMMKEKISEFWQPVCKVAIKEINPNLFLFQFFHLRDMERVLKQGPWSLDGHTLIIRLLQQGNVPTTVPLNHVPYWVQVHDVPVGCMSQTAGKQLGDFIGEFKEYDEKNNSNFLSTYMRIRVLVDVRRPLMRMKKIKVKGNSHEVKFKYEKLGTFCYYCGMLGHIEDFCKSLFSNPYDDGVRLWSSDLRADKRRGADLSRRKKQRH