Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060718.t1 | AES70414.1 | 52.1 | 317 | 62 | 4 | 1 | 293 | 1 | 251 | 3.90E-79 | 305.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060718.t1 | G7J017 | 52.1 | 317 | 62 | 4 | 1 | 293 | 1 | 251 | 2.8e-79 | 305.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060718.t1 | MTR_3g053920 | 52.050 | 317 | 62 | 4 | 1 | 293 | 1 | 251 | 6.08e-102 | 300 |
| MS.gene060718.t1 | MTR_2g061500 | 82.946 | 129 | 22 | 0 | 1 | 129 | 1 | 129 | 1.32e-77 | 233 |
| MS.gene060718.t1 | MTR_4g103530 | 79.787 | 94 | 19 | 0 | 55 | 148 | 1 | 94 | 7.05e-54 | 175 |
| MS.gene060718.t1 | MTR_7g011710 | 67.059 | 85 | 28 | 0 | 55 | 139 | 1 | 85 | 2.20e-36 | 128 |
| MS.gene060718.t1 | MTR_6g033215 | 32.828 | 198 | 126 | 3 | 4 | 199 | 102 | 294 | 1.10e-31 | 120 |
| MS.gene060718.t1 | MTR_0010s0370 | 32.571 | 175 | 114 | 2 | 7 | 177 | 3 | 177 | 1.78e-27 | 106 |
| MS.gene060718.t1 | MTR_0010s0350 | 32.571 | 175 | 114 | 2 | 7 | 177 | 3 | 177 | 1.78e-27 | 106 |
| MS.gene060718.t1 | MTR_1g036720 | 32.110 | 109 | 72 | 1 | 7 | 113 | 3 | 111 | 2.09e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060718.t1 | AT2G17920 | 26.168 | 214 | 150 | 5 | 8 | 216 | 9 | 219 | 2.46e-16 | 78.6 |
| MS.gene060718.t1 | AT3G57587 | 28.169 | 142 | 98 | 2 | 77 | 216 | 80 | 219 | 6.15e-15 | 75.1 |
| MS.gene060718.t1 | AT2G41590 | 28.169 | 142 | 98 | 2 | 77 | 216 | 80 | 219 | 4.57e-14 | 72.4 |
| MS.gene060718.t1 | AT3G31430 | 29.861 | 144 | 95 | 3 | 74 | 215 | 172 | 311 | 4.67e-14 | 72.4 |
| MS.gene060718.t1 | AT5G36228 | 28.000 | 150 | 102 | 3 | 71 | 216 | 72 | 219 | 5.29e-14 | 72.4 |
| MS.gene060718.t1 | AT3G47920 | 28.169 | 142 | 98 | 2 | 77 | 216 | 9 | 148 | 9.33e-13 | 68.2 |
| MS.gene060718.t1 | AT2G02103 | 26.761 | 142 | 100 | 2 | 77 | 216 | 80 | 219 | 3.79e-12 | 67.0 |
| MS.gene060718.t1 | AT5G25200 | 26.056 | 142 | 101 | 2 | 77 | 216 | 80 | 219 | 5.35e-12 | 66.2 |
| MS.gene060718.t1 | AT5G18636 | 26.056 | 142 | 101 | 2 | 77 | 216 | 80 | 219 | 5.35e-12 | 66.2 |
Find 71 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGATGACGGTGTCCGTAAT+TGG | 0.248678 | 1.3:-31720141 | MS.gene060718:CDS |
| CCTATACCTTGACCTACTTT+TGG | 0.251887 | 1.3:+31720403 | None:intergenic |
| CTGTGAACCATATCGACTTT+TGG | 0.279265 | 1.3:-31720462 | MS.gene060718:CDS |
| AGTCAATGCTGCACGTGTTT+TGG | 0.284676 | 1.3:-31720563 | MS.gene060718:CDS |
| GTACCAAGCCTTTGTGTAAC+TGG | 0.294565 | 1.3:+31720103 | None:intergenic |
| ATAGCTCCTACATGCATGTT+AGG | 0.311532 | 1.3:-31720333 | MS.gene060718:CDS |
| AGACATACGCTTGTTGAAAT+AGG | 0.325050 | 1.3:+31720663 | None:intergenic |
| ATAACGATCAAACACATATT+TGG | 0.331842 | 1.3:+31720606 | None:intergenic |
| CCTGAATCCAAAAGTCGATA+TGG | 0.337549 | 1.3:+31720455 | None:intergenic |
| CAAGGTATAGGAAGCTTCTT+AGG | 0.351704 | 1.3:-31720391 | MS.gene060718:CDS |
| TTCAAGGATTGCAGCAGTTT+CGG | 0.352785 | 1.3:+31720732 | None:intergenic |
| ATCCTTGAACACTGCTTGAT+TGG | 0.353392 | 1.3:-31720718 | MS.gene060718:CDS |
| CCTTCAGGTGCTGCTTCTGC+TGG | 0.367909 | 1.3:-31720020 | MS.gene060718:intron |
| GCATCTAATTCAAACAATTC+AGG | 0.379243 | 1.3:+31720163 | None:intergenic |
| CCGTTGAGATTGAGGTTTGA+AGG | 0.394549 | 1.3:+31720802 | None:intergenic |
| TCAGATCAGCTCCCCAATTA+CGG | 0.398562 | 1.3:+31720128 | None:intergenic |
| CAGGTTCATGGTCTGCCATT+CGG | 0.401961 | 1.3:-31720436 | MS.gene060718:CDS |
| GCTTGTTGAAATAGGCAAAC+TGG | 0.408898 | 1.3:+31720671 | None:intergenic |
| TGGTCGCGTCCTTGCTGATT+GGG | 0.410255 | 1.3:-31720698 | MS.gene060718:CDS |
| AGATGCGATCCATGGCAATA+TGG | 0.412574 | 1.3:+31720512 | None:intergenic |
| TGATGACGGTGTCCGTAATT+GGG | 0.416258 | 1.3:-31720140 | MS.gene060718:CDS |
| GTGATCGTAACCCGCTTGCC+TGG | 0.416512 | 1.3:+31720628 | None:intergenic |
| TTGGTCGCGTCCTTGCTGAT+TGG | 0.429664 | 1.3:-31720699 | MS.gene060718:CDS |
| CCAAAAGTAGGTCAAGGTAT+AGG | 0.450098 | 1.3:-31720403 | MS.gene060718:CDS |
| CTGTTGCCTTCTTCTTCCAC+AGG | 0.451525 | 1.3:-31719835 | MS.gene060718:CDS |
| ATGTCTCGTGCGTGGAAGCC+AGG | 0.452908 | 1.3:-31720646 | MS.gene060718:CDS |
| AGGTTAGACCGTTGAGATTG+AGG | 0.458876 | 1.3:+31720794 | None:intergenic |
| GACCAATCAAGCAGTGTTCA+AGG | 0.459935 | 1.3:+31720716 | None:intergenic |
| AGGAGCTATGGATAGTGTTT+CGG | 0.463737 | 1.3:+31720347 | None:intergenic |
| GCCATGGATCGCATCTCTCC+TGG | 0.471771 | 1.3:-31720505 | MS.gene060718:CDS |
| CCAAGCACTACGGGACGGTC+TGG | 0.479146 | 1.3:+31719790 | None:intergenic |
| TGTCACATGTGCGGATTGAT+CGG | 0.505720 | 1.3:-31720205 | MS.gene060718:CDS |
| CAGCGGGACAGTGACATCAA+TGG | 0.510981 | 1.3:+31720306 | None:intergenic |
| TGGCGTGTCCGTGCTTCTAA+CGG | 0.517786 | 1.3:-31720274 | MS.gene060718:CDS |
| TAACATGCATGTAGGAGCTA+TGG | 0.522257 | 1.3:+31720335 | None:intergenic |
| TAGCTCCTACATGCATGTTA+GGG | 0.525488 | 1.3:-31720332 | MS.gene060718:CDS |
| GGATTTATCCAACCAAAAGT+AGG | 0.542409 | 1.3:-31720415 | MS.gene060718:CDS |
| TACTGCCCAAAATGCAGTGT+TGG | 0.545967 | 1.3:-31719898 | MS.gene060718:CDS |
| CGGTCTAACCTTGTCTGAAG+AGG | 0.549059 | 1.3:-31720782 | MS.gene060718:CDS |
| ACCAGGAGAGATGCGATCCA+TGG | 0.550067 | 1.3:+31720504 | None:intergenic |
| GAAGTACCTGTGGAAGAAGA+AGG | 0.551152 | 1.3:+31719829 | None:intergenic |
| CAAAAGTCGATATGGTTCAC+AGG | 0.555880 | 1.3:+31720463 | None:intergenic |
| TGCGTGGAAGCCAGGCAAGC+GGG | 0.557289 | 1.3:-31720638 | MS.gene060718:CDS |
| CTCCTTCAGAAGCTTTGTCT+CGG | 0.557714 | 1.3:+31719997 | None:intergenic |
| GTGCGTGGAAGCCAGGCAAG+CGG | 0.565325 | 1.3:-31720639 | MS.gene060718:CDS |
| GGGACGGTCTGGCAGCAAGT+TGG | 0.575206 | 1.3:+31719801 | None:intergenic |
| GGCCGAGACAAAGCTTCTGA+AGG | 0.576719 | 1.3:-31719999 | MS.gene060718:CDS |
| ATGAAACTAGGAACGGCACC+AGG | 0.585390 | 1.3:+31720487 | None:intergenic |
| AAACCAGTTACACAAAGGCT+TGG | 0.585795 | 1.3:-31720106 | MS.gene060718:intron |
| ATCCAACCAAAAGTAGGTCA+AGG | 0.590347 | 1.3:-31720409 | MS.gene060718:CDS |
| CAAAAGCACCGTTAGAAGCA+CGG | 0.596624 | 1.3:+31720266 | None:intergenic |
| AGACAAAGCTTCTGAAGGAG+TGG | 0.598270 | 1.3:-31719994 | MS.gene060718:CDS |
| GGTCTAACCTTGTCTGAAGA+GGG | 0.602109 | 1.3:-31720781 | MS.gene060718:CDS |
| GTGACTGAAATGCAAGCATA+CGG | 0.603828 | 1.3:+31719949 | None:intergenic |
| GACAAAGCTTCTGAAGGAGT+GGG | 0.605080 | 1.3:-31719993 | MS.gene060718:CDS |
| GATGACGGTGTCCGTAATTG+GGG | 0.606390 | 1.3:-31720139 | MS.gene060718:CDS |
| TGACAACTTCCATATTGCCA+TGG | 0.609463 | 1.3:-31720521 | MS.gene060718:CDS |
| ATGGAAGTTGTCATACAACC+AGG | 0.615320 | 1.3:+31720531 | None:intergenic |
| TGGTTCACAGGAATGAAACT+AGG | 0.617203 | 1.3:+31720475 | None:intergenic |
| AGTTAAACCCTCTTCAGACA+AGG | 0.625083 | 1.3:+31720774 | None:intergenic |
| CCTTCAAACCTCAATCTCAA+CGG | 0.640995 | 1.3:-31720802 | MS.gene060718:CDS |
| CACAGGAATGAAACTAGGAA+CGG | 0.652231 | 1.3:+31720480 | None:intergenic |
| GTTGGATGCTGAAGTACCTG+TGG | 0.655520 | 1.3:+31719819 | None:intergenic |
| GGCAACCCTAACATGCATGT+AGG | 0.659886 | 1.3:+31720327 | None:intergenic |
| TTTGGTTGGATAAATCCGAA+TGG | 0.663612 | 1.3:+31720421 | None:intergenic |
| TTTGAATTAGATGCTGATGA+CGG | 0.670107 | 1.3:-31720154 | MS.gene060718:CDS |
| ACTGGATTTCCCAATCAGCA+AGG | 0.670643 | 1.3:+31720689 | None:intergenic |
| ACAAGCGTATGTCTCGTGCG+TGG | 0.674005 | 1.3:-31720654 | MS.gene060718:CDS |
| GTAAACCAAGCACTACGGGA+CGG | 0.681592 | 1.3:+31719785 | None:intergenic |
| ATCTGAAACCAGTTACACAA+AGG | 0.696662 | 1.3:-31720111 | MS.gene060718:CDS |
| TGGAAGTTGTCATACAACCA+GGG | 0.712324 | 1.3:+31720532 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTCAAATATGAAAAATT+GGG | - | chr1.3:31720370-31720389 | MS.gene060718:CDS | 10.0% |
| !! | CAATTTCAAATATGAAAAAT+TGG | - | chr1.3:31720369-31720388 | MS.gene060718:CDS | 15.0% |
| ! | ATAACGATCAAACACATATT+TGG | + | chr1.3:31720002-31720021 | None:intergenic | 25.0% |
| GCATCTAATTCAAACAATTC+AGG | + | chr1.3:31720445-31720464 | None:intergenic | 30.0% | |
| TTTGAATTAGATGCTGATGA+CGG | - | chr1.3:31720451-31720470 | MS.gene060718:CDS | 30.0% | |
| GGATTTATCCAACCAAAAGT+AGG | - | chr1.3:31720190-31720209 | MS.gene060718:CDS | 35.0% | |
| TTTGGTTGGATAAATCCGAA+TGG | + | chr1.3:31720187-31720206 | None:intergenic | 35.0% | |
| ! | AGACATACGCTTGTTGAAAT+AGG | + | chr1.3:31719945-31719964 | None:intergenic | 35.0% |
| ! | ATCTGAAACCAGTTACACAA+AGG | - | chr1.3:31720494-31720513 | MS.gene060718:CDS | 35.0% |
| ! | TTTAGCCAACACTGCATTTT+GGG | + | chr1.3:31720715-31720734 | None:intergenic | 35.0% |
| ! | TTTTAGCCAACACTGCATTT+TGG | + | chr1.3:31720716-31720735 | None:intergenic | 35.0% |
| !! | AATGCAGTGTTGGCTAAAAA+AGG | - | chr1.3:31720717-31720736 | MS.gene060718:CDS | 35.0% |
| !! | GTGTTGGCTAAAAAAGGTAA+TGG | - | chr1.3:31720723-31720742 | MS.gene060718:CDS | 35.0% |
| AAACCAGTTACACAAAGGCT+TGG | - | chr1.3:31720499-31720518 | MS.gene060718:CDS | 40.0% | |
| AGGAGCTATGGATAGTGTTT+CGG | + | chr1.3:31720261-31720280 | None:intergenic | 40.0% | |
| AGTTAAACCCTCTTCAGACA+AGG | + | chr1.3:31719834-31719853 | None:intergenic | 40.0% | |
| ATAGCTCCTACATGCATGTT+AGG | - | chr1.3:31720272-31720291 | MS.gene060718:CDS | 40.0% | |
| ATCCAACCAAAAGTAGGTCA+AGG | - | chr1.3:31720196-31720215 | MS.gene060718:CDS | 40.0% | |
| ATCCTTGAACACTGCTTGAT+TGG | - | chr1.3:31719887-31719906 | MS.gene060718:CDS | 40.0% | |
| ATGGAAGTTGTCATACAACC+AGG | + | chr1.3:31720077-31720096 | None:intergenic | 40.0% | |
| CAAAAGTCGATATGGTTCAC+AGG | + | chr1.3:31720145-31720164 | None:intergenic | 40.0% | |
| CAAGGTATAGGAAGCTTCTT+AGG | - | chr1.3:31720214-31720233 | MS.gene060718:CDS | 40.0% | |
| CACAGGAATGAAACTAGGAA+CGG | + | chr1.3:31720128-31720147 | None:intergenic | 40.0% | |
| CCAAAAGTAGGTCAAGGTAT+AGG | - | chr1.3:31720202-31720221 | MS.gene060718:CDS | 40.0% | |
| CCTGAATCCAAAAGTCGATA+TGG | + | chr1.3:31720153-31720172 | None:intergenic | 40.0% | |
| CCTTCAAACCTCAATCTCAA+CGG | - | chr1.3:31719803-31719822 | MS.gene060718:CDS | 40.0% | |
| GTGACTGAAATGCAAGCATA+CGG | + | chr1.3:31720659-31720678 | None:intergenic | 40.0% | |
| TAACATGCATGTAGGAGCTA+TGG | + | chr1.3:31720273-31720292 | None:intergenic | 40.0% | |
| TAGCTCCTACATGCATGTTA+GGG | - | chr1.3:31720273-31720292 | MS.gene060718:CDS | 40.0% | |
| TGACAACTTCCATATTGCCA+TGG | - | chr1.3:31720084-31720103 | MS.gene060718:intron | 40.0% | |
| TGGAAGTTGTCATACAACCA+GGG | + | chr1.3:31720076-31720095 | None:intergenic | 40.0% | |
| TGGTTCACAGGAATGAAACT+AGG | + | chr1.3:31720133-31720152 | None:intergenic | 40.0% | |
| TTCAAGGATTGCAGCAGTTT+CGG | + | chr1.3:31719876-31719895 | None:intergenic | 40.0% | |
| ! | CCTATACCTTGACCTACTTT+TGG | + | chr1.3:31720205-31720224 | None:intergenic | 40.0% |
| ! | GCTTGTTGAAATAGGCAAAC+TGG | + | chr1.3:31719937-31719956 | None:intergenic | 40.0% |
| ! | GGAATAAGGTCTTGTCACAA+CGG | + | chr1.3:31720540-31720559 | None:intergenic | 40.0% |
| !! | GACTTTTGGATTCAGGTTCA+TGG | - | chr1.3:31720157-31720176 | MS.gene060718:CDS | 40.0% |
| !! | TACCTTGACCTACTTTTGGT+TGG | + | chr1.3:31720201-31720220 | None:intergenic | 40.0% |
| !!! | CCATATCGACTTTTGGATTC+AGG | - | chr1.3:31720150-31720169 | MS.gene060718:CDS | 40.0% |
| !!! | CTGTGAACCATATCGACTTT+TGG | - | chr1.3:31720143-31720162 | MS.gene060718:CDS | 40.0% |
| !!! | GGTGTTTTTTGTCACATGTG+CGG | - | chr1.3:31720391-31720410 | MS.gene060718:CDS | 40.0% |
| ACTGGATTTCCCAATCAGCA+AGG | + | chr1.3:31719919-31719938 | None:intergenic | 45.0% | |
| AGATGCGATCCATGGCAATA+TGG | + | chr1.3:31720096-31720115 | None:intergenic | 45.0% | |
| AGGTTAGACCGTTGAGATTG+AGG | + | chr1.3:31719814-31719833 | None:intergenic | 45.0% | |
| CCGTTGAGATTGAGGTTTGA+AGG | + | chr1.3:31719806-31719825 | None:intergenic | 45.0% | |
| GACCAATCAAGCAGTGTTCA+AGG | + | chr1.3:31719892-31719911 | None:intergenic | 45.0% | |
| GGTCTAACCTTGTCTGAAGA+GGG | - | chr1.3:31719824-31719843 | MS.gene060718:CDS | 45.0% | |
| GTACCAAGCCTTTGTGTAAC+TGG | + | chr1.3:31720505-31720524 | None:intergenic | 45.0% | |
| GTCACAACGGTTTGTAACAG+CGG | + | chr1.3:31720527-31720546 | None:intergenic | 45.0% | |
| TACTGCCCAAAATGCAGTGT+TGG | - | chr1.3:31720707-31720726 | MS.gene060718:CDS | 45.0% | |
| TCAGATCAGCTCCCCAATTA+CGG | + | chr1.3:31720480-31720499 | None:intergenic | 45.0% | |
| ! | AGACAAAGCTTCTGAAGGAG+TGG | - | chr1.3:31720611-31720630 | MS.gene060718:CDS | 45.0% |
| ! | AGTCAATGCTGCACGTGTTT+TGG | - | chr1.3:31720042-31720061 | MS.gene060718:intron | 45.0% |
| ! | CCTGAAGGGTGATTTTGTTG+CGG | + | chr1.3:31720573-31720592 | None:intergenic | 45.0% |
| ! | CTCCTTCAGAAGCTTTGTCT+CGG | + | chr1.3:31720611-31720630 | None:intergenic | 45.0% |
| ! | GAAGTACCTGTGGAAGAAGA+AGG | + | chr1.3:31720779-31720798 | None:intergenic | 45.0% |
| ! | GACAAAGCTTCTGAAGGAGT+GGG | - | chr1.3:31720612-31720631 | MS.gene060718:CDS | 45.0% |
| ! | GTGATTTTGTTGCGGCAAAG+TGG | + | chr1.3:31720565-31720584 | None:intergenic | 45.0% |
| ! | TGTCACATGTGCGGATTGAT+CGG | - | chr1.3:31720400-31720419 | MS.gene060718:CDS | 45.0% |
| !! | CAAAAGCACCGTTAGAAGCA+CGG | + | chr1.3:31720342-31720361 | None:intergenic | 45.0% |
| !! | TGATGACGGTGTCCGTAATT+GGG | - | chr1.3:31720465-31720484 | MS.gene060718:CDS | 45.0% |
| !!! | ACACGCCACTCTTTTTTCAG+CGG | + | chr1.3:31720319-31720338 | None:intergenic | 45.0% |
| ATGAAACTAGGAACGGCACC+AGG | + | chr1.3:31720121-31720140 | None:intergenic | 50.0% | |
| CAGGTTCATGGTCTGCCATT+CGG | - | chr1.3:31720169-31720188 | MS.gene060718:CDS | 50.0% | |
| CCGCAACAAAATCACCCTTC+AGG | - | chr1.3:31720570-31720589 | MS.gene060718:CDS | 50.0% | |
| CGGTCTAACCTTGTCTGAAG+AGG | - | chr1.3:31719823-31719842 | MS.gene060718:CDS | 50.0% | |
| CTGTCCCGCTGAAAAAAGAG+TGG | - | chr1.3:31720311-31720330 | MS.gene060718:CDS | 50.0% | |
| CTGTTGCCTTCTTCTTCCAC+AGG | - | chr1.3:31720770-31720789 | MS.gene060718:CDS | 50.0% | |
| GGCAACCCTAACATGCATGT+AGG | + | chr1.3:31720281-31720300 | None:intergenic | 50.0% | |
| ! | GATGACGGTGTCCGTAATTG+GGG | - | chr1.3:31720466-31720485 | MS.gene060718:CDS | 50.0% |
| ! | GTTGGATGCTGAAGTACCTG+TGG | + | chr1.3:31720789-31720808 | None:intergenic | 50.0% |
| ! | TTTTGTTGCGGCAAAGTGGC+AGG | + | chr1.3:31720561-31720580 | None:intergenic | 50.0% |
| !! | CTGATGACGGTGTCCGTAAT+TGG | - | chr1.3:31720464-31720483 | MS.gene060718:CDS | 50.0% |
| !!! | CACGCCACTCTTTTTTCAGC+GGG | + | chr1.3:31720318-31720337 | None:intergenic | 50.0% |
| ACAAGCGTATGTCTCGTGCG+TGG | - | chr1.3:31719951-31719970 | MS.gene060718:CDS | 55.0% | |
| ACCAGGAGAGATGCGATCCA+TGG | + | chr1.3:31720104-31720123 | None:intergenic | 55.0% | |
| CAGCAGAAGCAGCACCTGAA+GGG | + | chr1.3:31720587-31720606 | None:intergenic | 55.0% | |
| CAGCGGGACAGTGACATCAA+TGG | + | chr1.3:31720302-31720321 | None:intergenic | 55.0% | |
| GCGGCAAAGTGGCAGGAATA+AGG | + | chr1.3:31720554-31720573 | None:intergenic | 55.0% | |
| GGCCGAGACAAAGCTTCTGA+AGG | - | chr1.3:31720606-31720625 | MS.gene060718:CDS | 55.0% | |
| TGGCGTGTCCGTGCTTCTAA+CGG | - | chr1.3:31720331-31720350 | MS.gene060718:CDS | 55.0% | |
| TTGGTCGCGTCCTTGCTGAT+TGG | - | chr1.3:31719906-31719925 | MS.gene060718:CDS | 55.0% | |
| ! | TGGTCGCGTCCTTGCTGATT+GGG | - | chr1.3:31719907-31719926 | MS.gene060718:CDS | 55.0% |
| !! | GCTGCACGTGTTTTGGACGA+GGG | - | chr1.3:31720049-31720068 | MS.gene060718:intron | 55.0% |
| !! | TGCTGCACGTGTTTTGGACG+AGG | - | chr1.3:31720048-31720067 | MS.gene060718:intron | 55.0% |
| ATGTCTCGTGCGTGGAAGCC+AGG | - | chr1.3:31719959-31719978 | MS.gene060718:CDS | 60.0% | |
| CCAGCAGAAGCAGCACCTGA+AGG | + | chr1.3:31720588-31720607 | None:intergenic | 60.0% | |
| GCCATGGATCGCATCTCTCC+TGG | - | chr1.3:31720100-31720119 | MS.gene060718:intron | 60.0% | |
| GTGATCGTAACCCGCTTGCC+TGG | + | chr1.3:31719980-31719999 | None:intergenic | 60.0% | |
| !! | CCTTCAGGTGCTGCTTCTGC+TGG | - | chr1.3:31720585-31720604 | MS.gene060718:CDS | 60.0% |
| !! | GTGTTTTGGACGAGGGTCCC+TGG | - | chr1.3:31720056-31720075 | MS.gene060718:intron | 60.0% |
| GGGACGGTCTGGCAGCAAGT+TGG | + | chr1.3:31720807-31720826 | None:intergenic | 65.0% | |
| GTGCGTGGAAGCCAGGCAAG+CGG | - | chr1.3:31719966-31719985 | MS.gene060718:CDS | 65.0% | |
| TGCGTGGAAGCCAGGCAAGC+GGG | - | chr1.3:31719967-31719986 | MS.gene060718:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 31719797 | 31720830 | 31719797 | ID=MS.gene060718 |
| chr1.3 | mRNA | 31719797 | 31720830 | 31719797 | ID=MS.gene060718.t1;Parent=MS.gene060718 |
| chr1.3 | exon | 31720107 | 31720830 | 31720107 | ID=MS.gene060718.t1.exon1;Parent=MS.gene060718.t1 |
| chr1.3 | CDS | 31720107 | 31720830 | 31720107 | ID=cds.MS.gene060718.t1;Parent=MS.gene060718.t1 |
| chr1.3 | exon | 31719797 | 31720035 | 31719797 | ID=MS.gene060718.t1.exon2;Parent=MS.gene060718.t1 |
| chr1.3 | CDS | 31719797 | 31720035 | 31719797 | ID=cds.MS.gene060718.t1;Parent=MS.gene060718.t1 |
| Gene Sequence |
| Protein sequence |