Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060386.t1 | PNX72859.1 | 36.1 | 579 | 234 | 8 | 5 | 454 | 124 | 695 | 4.80E-95 | 358.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060386.t1 | A0A2K3L2W5 | 36.1 | 579 | 234 | 8 | 5 | 454 | 124 | 695 | 3.4e-95 | 358.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060386.t1 | MTR_3g053920 | 41.367 | 278 | 95 | 3 | 1 | 275 | 1 | 213 | 1.72e-68 | 221 |
MS.gene060386.t1 | MTR_2g061500 | 58.915 | 129 | 53 | 0 | 1 | 129 | 1 | 129 | 1.21e-49 | 167 |
MS.gene060386.t1 | MTR_1g100687 | 47.581 | 124 | 63 | 1 | 385 | 506 | 108 | 231 | 6.39e-35 | 131 |
MS.gene060386.t1 | MTR_6g033215 | 33.503 | 197 | 124 | 3 | 5 | 199 | 103 | 294 | 6.63e-35 | 132 |
MS.gene060386.t1 | MTR_8g463110 | 37.624 | 202 | 104 | 2 | 329 | 508 | 94 | 295 | 1.96e-34 | 137 |
MS.gene060386.t1 | MTR_4g103530 | 59.551 | 89 | 36 | 0 | 59 | 147 | 5 | 93 | 3.36e-34 | 127 |
MS.gene060386.t1 | MTR_0010s0370 | 34.286 | 175 | 111 | 2 | 7 | 177 | 3 | 177 | 3.37e-31 | 119 |
MS.gene060386.t1 | MTR_0010s0350 | 34.286 | 175 | 111 | 2 | 7 | 177 | 3 | 177 | 3.37e-31 | 119 |
MS.gene060386.t1 | MTR_7g011710 | 58.140 | 86 | 36 | 0 | 55 | 140 | 1 | 86 | 4.62e-31 | 118 |
MS.gene060386.t1 | MTR_3g044860 | 46.774 | 124 | 40 | 1 | 385 | 508 | 64 | 161 | 5.70e-28 | 114 |
MS.gene060386.t1 | MTR_6g034215 | 51.961 | 102 | 49 | 0 | 407 | 508 | 198 | 299 | 1.48e-25 | 107 |
MS.gene060386.t1 | MTR_4g020630 | 45.968 | 124 | 59 | 1 | 385 | 508 | 116 | 231 | 1.09e-24 | 107 |
MS.gene060386.t1 | MTR_0042s0130 | 40.833 | 120 | 71 | 0 | 385 | 504 | 211 | 330 | 3.44e-24 | 103 |
MS.gene060386.t1 | MTR_6g009010 | 48.780 | 82 | 42 | 0 | 385 | 466 | 179 | 260 | 2.64e-22 | 96.7 |
MS.gene060386.t1 | MTR_1g051330 | 37.815 | 119 | 69 | 2 | 386 | 502 | 328 | 443 | 4.35e-20 | 94.4 |
MS.gene060386.t1 | MTR_1g036720 | 35.185 | 108 | 68 | 1 | 7 | 112 | 3 | 110 | 5.83e-16 | 74.3 |
MS.gene060386.t1 | MTR_1g062290 | 47.761 | 67 | 35 | 0 | 399 | 465 | 1 | 67 | 1.61e-15 | 75.1 |
MS.gene060386.t1 | MTR_8g470880 | 56.897 | 58 | 25 | 0 | 385 | 442 | 467 | 524 | 6.66e-15 | 77.8 |
MS.gene060386.t1 | MTR_2g055450 | 32.759 | 116 | 63 | 2 | 385 | 500 | 228 | 328 | 2.34e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060386.t1 | AT2G17920 | 28.472 | 144 | 99 | 2 | 77 | 218 | 80 | 221 | 5.76e-15 | 76.3 |
MS.gene060386.t1 | AT5G36228 | 25.773 | 194 | 139 | 3 | 36 | 226 | 39 | 230 | 1.60e-14 | 75.5 |
MS.gene060386.t1 | AT3G57587 | 23.721 | 215 | 158 | 3 | 8 | 218 | 9 | 221 | 1.79e-14 | 75.5 |
MS.gene060386.t1 | AT2G41590 | 25.405 | 185 | 134 | 2 | 36 | 218 | 39 | 221 | 8.09e-14 | 73.6 |
MS.gene060386.t1 | AT5G18636 | 25.405 | 185 | 134 | 2 | 36 | 218 | 39 | 221 | 2.04e-13 | 72.0 |
MS.gene060386.t1 | AT5G25200 | 25.405 | 185 | 134 | 2 | 36 | 218 | 39 | 221 | 2.11e-13 | 72.0 |
MS.gene060386.t1 | AT2G02103 | 24.865 | 185 | 135 | 2 | 36 | 218 | 39 | 221 | 7.86e-13 | 70.5 |
MS.gene060386.t1 | AT3G31430 | 24.312 | 218 | 152 | 6 | 2 | 215 | 103 | 311 | 3.84e-12 | 68.2 |
Find 160 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTTGAGAACGCTTGGAAAT+TGG | 0.230388 | 7.3:-1822223 | MS.gene060386:CDS |
TCCTCCATTTCAAACCTATT+CGG | 0.284862 | 7.3:+1823678 | None:intergenic |
TGATTCAAATTGACGCTTGC+TGG | 0.292360 | 7.3:+1823990 | None:intergenic |
GTCAAGTGTTGCTGGGGATA+TGG | 0.297582 | 7.3:-1823109 | MS.gene060386:CDS |
TAAGAAGCGCAAGCGTATAA+AGG | 0.310256 | 7.3:-1823178 | MS.gene060386:CDS |
CAATTACTTCAAGGAACATA+TGG | 0.315398 | 7.3:-1824180 | MS.gene060386:CDS |
ATTCTTGATCACTGCTTAAT+AGG | 0.316199 | 7.3:-1824233 | MS.gene060386:CDS |
CTGTTATCTGTGTGGTCTGT+TGG | 0.320720 | 7.3:-1823721 | MS.gene060386:CDS |
GAGTGTTGGCTCTCCCATTC+GGG | 0.331060 | 7.3:-1822174 | MS.gene060386:CDS |
TGACAATTCGGTGCAGGAAA+TGG | 0.344953 | 7.3:-1823544 | MS.gene060386:CDS |
CCTCCATTTCAAACCTATTC+GGG | 0.344988 | 7.3:+1823679 | None:intergenic |
AGGAACATATGGGGCACATT+TGG | 0.350744 | 7.3:-1824169 | MS.gene060386:CDS |
TGCGTACGGTGCAGCATGAT+TGG | 0.364784 | 7.3:+1822282 | None:intergenic |
AAACCAGTGGTAAGGCGTTT+AGG | 0.369074 | 7.3:-1823621 | MS.gene060386:CDS |
ATTTGAATCATCTGGACATA+TGG | 0.369587 | 7.3:-1823977 | MS.gene060386:CDS |
GGAGTGTTGGCTCTCCCATT+CGG | 0.373313 | 7.3:-1822175 | MS.gene060386:CDS |
AGAACTATAATGAGTATTCC+TGG | 0.377651 | 7.3:+1823863 | None:intergenic |
CTGTTAAGGTGAGGCCTTGA+AGG | 0.386785 | 7.3:+1824303 | None:intergenic |
GATGTAGTGTCAAGTGTTGC+TGG | 0.386829 | 7.3:-1823117 | MS.gene060386:CDS |
TGTTATCTGTGTGGTCTGTT+GGG | 0.391407 | 7.3:-1823720 | MS.gene060386:CDS |
GTCTCTGCCGCGACTCACTA+TGG | 0.400702 | 7.3:-1823325 | MS.gene060386:CDS |
TTGTCACGCTGTAGTCTTTG+TGG | 0.403937 | 7.3:+1823561 | None:intergenic |
AGGTCCTGGAGGAGGGGCCG+TGG | 0.406456 | 7.3:-1824064 | MS.gene060386:CDS |
GTCGCGGCAGAGACAGAGTT+TGG | 0.408159 | 7.3:+1823334 | None:intergenic |
GATTCGTTTCAATTACTTCA+AGG | 0.410002 | 7.3:-1824189 | MS.gene060386:CDS |
ATCTGATTGAATTTGATTCC+AGG | 0.410945 | 7.3:-1823881 | MS.gene060386:CDS |
TTATACGCTTGCGCTTCTTA+AGG | 0.420511 | 7.3:+1823181 | None:intergenic |
AGTTTAAGTATGAAAAGCTT+GGG | 0.420862 | 7.3:-1823749 | MS.gene060386:CDS |
AGTCAATCCTTCATCTGTTA+AGG | 0.421004 | 7.3:+1824289 | None:intergenic |
CTGACAAGACCTGCCCGAAT+AGG | 0.423285 | 7.3:-1823692 | MS.gene060386:CDS |
GCTTGACGCTGCAAAGGTCC+TGG | 0.425447 | 7.3:-1824078 | MS.gene060386:CDS |
CGCTGCAAAGGTCCTGGAGG+AGG | 0.427387 | 7.3:-1824072 | MS.gene060386:CDS |
CGTCAAGCCGGTGATGGAAT+TGG | 0.429537 | 7.3:+1824093 | None:intergenic |
GCTATGTCAGGTGTTTCTAC+AGG | 0.430883 | 7.3:-1823264 | MS.gene060386:CDS |
AGCGCAAGAACGAGTGGATT+AGG | 0.435665 | 7.3:+1823291 | None:intergenic |
GACAATTCGGTGCAGGAAAT+GGG | 0.439958 | 7.3:-1823543 | MS.gene060386:CDS |
TGCTACACTTGAAAATTTAG+TGG | 0.444330 | 7.3:-1822325 | MS.gene060386:CDS |
GAACGCTTGGAAATTGGAAC+CGG | 0.444363 | 7.3:-1822217 | MS.gene060386:CDS |
AGAGCCACGGCCCCTCCTCC+AGG | 0.445767 | 7.3:+1824060 | None:intergenic |
AGGTGAGGCCTTGAAGGTTA+AGG | 0.446133 | 7.3:+1824309 | None:intergenic |
TGAAGGATTGACTCTCAATC+TGG | 0.446501 | 7.3:-1824279 | MS.gene060386:CDS |
GGTCAACATGTTTCTGCTGC+TGG | 0.446617 | 7.3:-1823522 | MS.gene060386:CDS |
AATTACTTCAAGGAACATAT+GGG | 0.448241 | 7.3:-1824179 | MS.gene060386:CDS |
AAGCGTCAATTTGAATCATC+TGG | 0.454920 | 7.3:-1823985 | MS.gene060386:CDS |
CTGCTGGAAACTTAGCTGTT+GGG | 0.457786 | 7.3:-1823506 | MS.gene060386:CDS |
ACTGCTGACCTTAACCTTCA+AGG | 0.458508 | 7.3:-1824317 | MS.gene060386:CDS |
AAAACTTCGCTGGTTGATTG+AGG | 0.462741 | 7.3:+1822248 | None:intergenic |
AAGAAGCGCAAGCGTATAAA+GGG | 0.462842 | 7.3:-1823177 | MS.gene060386:CDS |
TTCTGTACCAATTCCATCAC+CGG | 0.463057 | 7.3:-1824100 | MS.gene060386:CDS |
CCTCGTGTGGGCAATGGAAT+CGG | 0.468059 | 7.3:-1823918 | MS.gene060386:CDS |
TCAAGTGTTGCTGGGGATAT+GGG | 0.469433 | 7.3:-1823108 | MS.gene060386:CDS |
CAGGTGCATCAGCTACCATT+TGG | 0.471899 | 7.3:-1823951 | MS.gene060386:CDS |
CTGCCCGAATAGGTTTGAAA+TGG | 0.473016 | 7.3:-1823682 | MS.gene060386:CDS |
GTGCTTTGGCTAACCAATCC+TGG | 0.476033 | 7.3:-1822365 | MS.gene060386:CDS |
CGCTGTAGTCTTTGTGGGAT+AGG | 0.476099 | 7.3:+1823567 | None:intergenic |
AAGACTACAGCGTGACAATT+CGG | 0.481038 | 7.3:-1823556 | MS.gene060386:CDS |
GCTGCTGGAAACTTAGCTGT+TGG | 0.481876 | 7.3:-1823507 | MS.gene060386:CDS |
TGTCACGCTGTAGTCTTTGT+GGG | 0.483422 | 7.3:+1823562 | None:intergenic |
ATGGGGCACATTTGGAGGCC+AGG | 0.484037 | 7.3:-1824161 | MS.gene060386:CDS |
TTGGGTAGTGATCAAAAGCC+GGG | 0.484403 | 7.3:+1822301 | None:intergenic |
GCGTACGGTGCAGCATGATT+GGG | 0.486016 | 7.3:+1822283 | None:intergenic |
TTTGAATCATCTGGACATAT+GGG | 0.486363 | 7.3:-1823976 | MS.gene060386:CDS |
AAACTTCGCTGGTTGATTGA+GGG | 0.490663 | 7.3:+1822249 | None:intergenic |
GTACGGCTGCTACAAACATC+TGG | 0.501396 | 7.3:-1823599 | MS.gene060386:CDS |
ATGTAGTGTCAAGTGTTGCT+GGG | 0.501530 | 7.3:-1823116 | MS.gene060386:CDS |
AATCAACCTCGTGTGGGCAA+TGG | 0.504591 | 7.3:-1823924 | MS.gene060386:CDS |
ACGCTTGCTGGAACAACTCC+AGG | 0.505536 | 7.3:+1824002 | None:intergenic |
CAGTTTAAGTATGAAAAGCT+TGG | 0.505746 | 7.3:-1823750 | MS.gene060386:CDS |
ATCCTGGTTCAACATGTATC+CGG | 0.505994 | 7.3:-1822349 | MS.gene060386:CDS |
CTTGCGCTACCAGCTATGTC+AGG | 0.506354 | 7.3:-1823276 | MS.gene060386:CDS |
TGCTACAAACATCTGGCTGC+AGG | 0.507028 | 7.3:-1823592 | MS.gene060386:CDS |
AACATATGGGGCACATTTGG+AGG | 0.508581 | 7.3:-1824166 | MS.gene060386:CDS |
GGCCTCACCTTAACAGATGA+AGG | 0.509460 | 7.3:-1824296 | MS.gene060386:CDS |
TTGCAGCGTCAAGCCGGTGA+TGG | 0.511141 | 7.3:+1824087 | None:intergenic |
ACTTGAAAATTTAGTGGCCC+CGG | 0.516066 | 7.3:-1822319 | MS.gene060386:CDS |
CTATGTCAGGTGTTTCTACA+GGG | 0.516900 | 7.3:-1823263 | MS.gene060386:CDS |
AGAGTTTGGTTTGTTCCGCT+TGG | 0.517520 | 7.3:+1823348 | None:intergenic |
CATTTCAAACCTATTCGGGC+AGG | 0.517796 | 7.3:+1823683 | None:intergenic |
GTGCGGCAGACATGTGGACT+TGG | 0.520999 | 7.3:-1822122 | MS.gene060386:CDS |
TGGGGCACATTTGGAGGCCA+GGG | 0.522434 | 7.3:-1824160 | MS.gene060386:CDS |
AGAGCGGCTAGACCGTGCTT+TGG | 0.522451 | 7.3:-1822379 | MS.gene060386:CDS |
CGAGGTTGATTCAGACCAAA+TGG | 0.522878 | 7.3:+1823936 | None:intergenic |
GCTGCAAAGGTCCTGGAGGA+GGG | 0.523944 | 7.3:-1824071 | MS.gene060386:CDS |
TCAGAAAAGAGGGCGCTGGC+AGG | 0.527162 | 7.3:-1823480 | MS.gene060386:intron |
CTTAAACTGCATTGTCGCAT+AGG | 0.529353 | 7.3:+1823764 | None:intergenic |
ATCTGCCATTCTTGTTTCAG+AGG | 0.529692 | 7.3:+1823804 | None:intergenic |
GATACATGTTGAACCAGGAT+TGG | 0.529740 | 7.3:+1822352 | None:intergenic |
CTGTACCTCTGAAACAAGAA+TGG | 0.531454 | 7.3:-1823809 | MS.gene060386:CDS |
TCTCAAACCGAAAACTTCGC+TGG | 0.535041 | 7.3:+1822238 | None:intergenic |
CTCATTATAGTTCTTATATG+CGG | 0.535437 | 7.3:-1823854 | MS.gene060386:CDS |
GTGGTGGAACGTATTGCTCC+TGG | 0.539348 | 7.3:-1824020 | MS.gene060386:CDS |
GTGATGGTAACACGTTTCCC+TGG | 0.544874 | 7.3:+1824143 | None:intergenic |
GTAGAAACACCTGACATAGC+TGG | 0.551635 | 7.3:+1823267 | None:intergenic |
AATGGAATCGGTAAGTATCT+CGG | 0.552095 | 7.3:-1823906 | MS.gene060386:CDS |
GTACCTAAACGCCTTACCAC+TGG | 0.552187 | 7.3:+1823618 | None:intergenic |
ATTGGGTAGTGATCAAAAGC+CGG | 0.553323 | 7.3:+1822300 | None:intergenic |
TGGTCTGAATCAACCTCGTG+TGG | 0.555157 | 7.3:-1823931 | MS.gene060386:CDS |
CTGTTGGGCCATCAGAAAAG+AGG | 0.555917 | 7.3:-1823491 | MS.gene060386:CDS |
GGACAACGATATACGTGGAT+GGG | 0.556942 | 7.3:-1823655 | MS.gene060386:CDS |
GCCATCAGAAAAGAGGGCGC+TGG | 0.557022 | 7.3:-1823484 | MS.gene060386:CDS |
CCCGAATAGGTTTGAAATGG+AGG | 0.558785 | 7.3:-1823679 | MS.gene060386:CDS |
TCACCGGCTTGACGCTGCAA+AGG | 0.561928 | 7.3:-1824084 | MS.gene060386:CDS |
GGACCTTTGCAGCGTCAAGC+CGG | 0.566508 | 7.3:+1824081 | None:intergenic |
GGAACCGGGGTTTGATGAGA+TGG | 0.567933 | 7.3:-1822202 | MS.gene060386:CDS |
AATGGCTGAAACCAGTGGTA+AGG | 0.570704 | 7.3:-1823629 | MS.gene060386:CDS |
AACGCTTGGAAATTGGAACC+GGG | 0.575909 | 7.3:-1822216 | MS.gene060386:CDS |
GACAACGATATACGTGGATG+GGG | 0.577292 | 7.3:-1823654 | MS.gene060386:CDS |
ATCAGGTTCAGCTTGGGTGA+TGG | 0.578837 | 7.3:+1824127 | None:intergenic |
ATGAGATGGTGAAGGAGTGT+TGG | 0.583975 | 7.3:-1822188 | MS.gene060386:CDS |
ACAGCGTGACAATTCGGTGC+AGG | 0.588348 | 7.3:-1823550 | MS.gene060386:CDS |
TCATCTGGACATATGGGTGC+AGG | 0.592215 | 7.3:-1823970 | MS.gene060386:CDS |
TGATAACTACAACATGGTGG+TGG | 0.594242 | 7.3:-1824036 | MS.gene060386:CDS |
CCGATTCCATTGCCCACACG+AGG | 0.595212 | 7.3:+1823918 | None:intergenic |
ACAACGATATACGTGGATGG+GGG | 0.595348 | 7.3:-1823653 | MS.gene060386:CDS |
ATAATTGTGCGGCAGACATG+TGG | 0.595812 | 7.3:-1822128 | MS.gene060386:CDS |
AGTGGTAAGGCGTTTAGGTA+CGG | 0.596678 | 7.3:-1823616 | MS.gene060386:CDS |
CAACGATATACGTGGATGGG+GGG | 0.601853 | 7.3:-1823652 | MS.gene060386:CDS |
CTGCAAAGGTCCTGGAGGAG+GGG | 0.601917 | 7.3:-1824070 | MS.gene060386:CDS |
CAGACATGTGGACTTGGAGT+CGG | 0.602081 | 7.3:-1822116 | MS.gene060386:CDS |
TGCTGCACCGTACGCAAGTG+AGG | 0.606814 | 7.3:-1822275 | MS.gene060386:CDS |
TTGTGTGCGTAACAATTACA+CGG | 0.608905 | 7.3:-1822040 | MS.gene060386:CDS |
AGGACAACGATATACGTGGA+TGG | 0.610109 | 7.3:-1823656 | MS.gene060386:CDS |
GTTAAGGTCAGCAGTAGACA+TGG | 0.613037 | 7.3:+1824325 | None:intergenic |
GATATGGGAAAATTTGCTGT+AGG | 0.614030 | 7.3:-1823093 | MS.gene060386:intron |
TAACTCTTCTGTTACTGCTG+TGG | 0.614847 | 7.3:-1823235 | MS.gene060386:CDS |
GAATAGGTTTGAAATGGAGG+AGG | 0.616184 | 7.3:-1823676 | MS.gene060386:CDS |
AGTGTTGGCTCTCCCATTCG+GGG | 0.616801 | 7.3:-1822173 | MS.gene060386:CDS |
ATCCGGATACATGTTGAACC+AGG | 0.617357 | 7.3:+1822347 | None:intergenic |
TTCACCATCTCATCAAACCC+CGG | 0.619721 | 7.3:+1822198 | None:intergenic |
GCTGGTAGCGCAAGAACGAG+TGG | 0.620176 | 7.3:+1823285 | None:intergenic |
ATCCTTCATCTGTTAAGGTG+AGG | 0.620666 | 7.3:+1824294 | None:intergenic |
AAGAATTTGAGTAGCATCAG+TGG | 0.622026 | 7.3:+1824250 | None:intergenic |
TGTGTGCGTAACAATTACAC+GGG | 0.626212 | 7.3:-1822039 | MS.gene060386:CDS |
TGTTGGGCCATCAGAAAAGA+GGG | 0.632261 | 7.3:-1823490 | MS.gene060386:CDS |
GGGGTGTTCTGTTATCTGTG+TGG | 0.635538 | 7.3:-1823729 | MS.gene060386:CDS |
TGGCAGATTCGAGTGAATGA+CGG | 0.637045 | 7.3:-1823789 | MS.gene060386:CDS |
GTGTTGGCTCTCCCATTCGG+GGG | 0.640757 | 7.3:-1822172 | MS.gene060386:CDS |
GGGGTTTGATGAGATGGTGA+AGG | 0.643827 | 7.3:-1822196 | MS.gene060386:CDS |
TACTGCTGTGGACGACAATG+AGG | 0.646530 | 7.3:-1823223 | MS.gene060386:CDS |
ACAGATGTGGCTTCACCAAG+CGG | 0.646811 | 7.3:-1823363 | MS.gene060386:intron |
ATGTCAGGTGTTTCTACAGG+GGG | 0.648528 | 7.3:-1823261 | MS.gene060386:CDS |
TCATCGGCAAAATAATTGTG+CGG | 0.653285 | 7.3:-1822139 | MS.gene060386:CDS |
AGGATTGGTTAGCCAAAGCA+CGG | 0.657650 | 7.3:+1822367 | None:intergenic |
AGGGACGCCTCACTTGCGTA+CGG | 0.658444 | 7.3:+1822268 | None:intergenic |
TGACGCTGCAAAGGTCCTGG+AGG | 0.664164 | 7.3:-1824075 | MS.gene060386:CDS |
GGTCTGAATCAACCTCGTGT+GGG | 0.665930 | 7.3:-1823930 | MS.gene060386:CDS |
ATTACTTCAAGGAACATATG+GGG | 0.666307 | 7.3:-1824178 | MS.gene060386:CDS |
TGAGTCTCCATAGTGAGTCG+CGG | 0.674256 | 7.3:+1823318 | None:intergenic |
TTGTAGTTATCATAGAGCCA+CGG | 0.675083 | 7.3:+1824047 | None:intergenic |
GTTTAAGTATGAAAAGCTTG+GGG | 0.676485 | 7.3:-1823748 | MS.gene060386:CDS |
ACGCTTGGAAATTGGAACCG+GGG | 0.681406 | 7.3:-1822215 | MS.gene060386:CDS |
GTGTGCGTAACAATTACACG+GGG | 0.689022 | 7.3:-1822038 | MS.gene060386:CDS |
TGGGTAGTGATCAAAAGCCG+GGG | 0.697532 | 7.3:+1822302 | None:intergenic |
TGTAGTGTCAAGTGTTGCTG+GGG | 0.700918 | 7.3:-1823115 | MS.gene060386:CDS |
TATGTCAGGTGTTTCTACAG+GGG | 0.704600 | 7.3:-1823262 | MS.gene060386:CDS |
GCTCTATGATAACTACAACA+TGG | 0.711588 | 7.3:-1824042 | MS.gene060386:CDS |
CTATGATAACTACAACATGG+TGG | 0.722488 | 7.3:-1824039 | MS.gene060386:CDS |
GAGGAGGACAACGATATACG+TGG | 0.733300 | 7.3:-1823660 | MS.gene060386:CDS |
CGACAATGAGGATGTCACTG+TGG | 0.777920 | 7.3:-1823211 | MS.gene060386:CDS |
TGTGCGTAACAATTACACGG+GGG | 0.843785 | 7.3:-1822037 | MS.gene060386:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTGATAGAGAATTAAGT+TGG | + | chr7.3:1822952-1822971 | None:intergenic | 20.0% |
!!! | TTCTATAAAGTCTCATATTT+TGG | - | chr7.3:1822922-1822941 | MS.gene060386:intron | 20.0% |
!!! | TTTTGATAGAGAATTAAGTT+GGG | + | chr7.3:1822951-1822970 | None:intergenic | 20.0% |
! | AATTACTTCAAGGAACATAT+GGG | - | chr7.3:1822170-1822189 | MS.gene060386:CDS | 25.0% |
! | AATTGGTACAGAAAAAAATC+AGG | + | chr7.3:1822242-1822261 | None:intergenic | 25.0% |
! | AGTTTAAGTATGAAAAGCTT+GGG | - | chr7.3:1822600-1822619 | MS.gene060386:intron | 25.0% |
! | CTCATTATAGTTCTTATATG+CGG | - | chr7.3:1822495-1822514 | MS.gene060386:intron | 25.0% |
!! | TAATGCTGATAATGATGTAA+CGG | - | chr7.3:1823338-1823357 | MS.gene060386:CDS | 25.0% |
AAAAAAATCAGGTTCAGCTT+GGG | + | chr7.3:1822231-1822250 | None:intergenic | 30.0% | |
AAATAACCACATAACAGTAG+AGG | - | chr7.3:1823643-1823662 | MS.gene060386:CDS | 30.0% | |
AACCCATTTATCAACCAATT+CGG | + | chr7.3:1823854-1823873 | None:intergenic | 30.0% | |
AAGATTCTAATTCTGCTACA+TGG | - | chr7.3:1823669-1823688 | MS.gene060386:CDS | 30.0% | |
AGAACTATAATGAGTATTCC+TGG | + | chr7.3:1822489-1822508 | None:intergenic | 30.0% | |
AGACTCTTAAACCAAGTAAA+AGG | + | chr7.3:1823929-1823948 | None:intergenic | 30.0% | |
ATCTGATTGAATTTGATTCC+AGG | - | chr7.3:1822468-1822487 | MS.gene060386:intron | 30.0% | |
ATTACTTCAAGGAACATATG+GGG | - | chr7.3:1822171-1822190 | MS.gene060386:CDS | 30.0% | |
ATTCTTGATCACTGCTTAAT+AGG | - | chr7.3:1822116-1822135 | MS.gene060386:CDS | 30.0% | |
ATTTGAATCATCTGGACATA+TGG | - | chr7.3:1822372-1822391 | MS.gene060386:CDS | 30.0% | |
CAATTACTTCAAGGAACATA+TGG | - | chr7.3:1822169-1822188 | MS.gene060386:CDS | 30.0% | |
CAGTTTAAGTATGAAAAGCT+TGG | - | chr7.3:1822599-1822618 | MS.gene060386:intron | 30.0% | |
GATTCGTTTCAATTACTTCA+AGG | - | chr7.3:1822160-1822179 | MS.gene060386:CDS | 30.0% | |
GTTTAAGTATGAAAAGCTTG+GGG | - | chr7.3:1822601-1822620 | MS.gene060386:intron | 30.0% | |
TGCTACACTTGAAAATTTAG+TGG | - | chr7.3:1824024-1824043 | MS.gene060386:CDS | 30.0% | |
TTTACTTGGTTTAAGAGTCT+TGG | - | chr7.3:1823929-1823948 | MS.gene060386:CDS | 30.0% | |
TTTGAATCATCTGGACATAT+GGG | - | chr7.3:1822373-1822392 | MS.gene060386:CDS | 30.0% | |
! | GATTTCAATGACATTTTGGA+TGG | - | chr7.3:1823800-1823819 | MS.gene060386:CDS | 30.0% |
! | TGCTTTTCTGTTAATAGTGT+TGG | - | chr7.3:1823557-1823576 | MS.gene060386:CDS | 30.0% |
!!! | AAATTTTCAAGTGTAGCATC+CGG | + | chr7.3:1824022-1824041 | None:intergenic | 30.0% |
AAGAATTTGAGTAGCATCAG+TGG | + | chr7.3:1822102-1822121 | None:intergenic | 35.0% | |
AAGCGTCAATTTGAATCATC+TGG | - | chr7.3:1822364-1822383 | MS.gene060386:CDS | 35.0% | |
AAGTAAGTCTTTGACAGATG+TGG | - | chr7.3:1822973-1822992 | MS.gene060386:intron | 35.0% | |
AATGGAATCGGTAAGTATCT+CGG | - | chr7.3:1822443-1822462 | MS.gene060386:intron | 35.0% | |
AGTCAATCCTTCATCTGTTA+AGG | + | chr7.3:1822063-1822082 | None:intergenic | 35.0% | |
CTATGATAACTACAACATGG+TGG | - | chr7.3:1822310-1822329 | MS.gene060386:CDS | 35.0% | |
CTTACAACACTCATTTACCT+CGG | + | chr7.3:1823386-1823405 | None:intergenic | 35.0% | |
GAAAAAAATCAGGTTCAGCT+TGG | + | chr7.3:1822232-1822251 | None:intergenic | 35.0% | |
GCTCTATGATAACTACAACA+TGG | - | chr7.3:1822307-1822326 | MS.gene060386:CDS | 35.0% | |
TCATCGGCAAAATAATTGTG+CGG | - | chr7.3:1824210-1824229 | MS.gene060386:CDS | 35.0% | |
TCCTCCATTTCAAACCTATT+CGG | + | chr7.3:1822674-1822693 | None:intergenic | 35.0% | |
TTGTAGTTATCATAGAGCCA+CGG | + | chr7.3:1822305-1822324 | None:intergenic | 35.0% | |
TTGTGTGCGTAACAATTACA+CGG | - | chr7.3:1824309-1824328 | MS.gene060386:CDS | 35.0% | |
! | AGGGGATTTCAATGACATTT+TGG | - | chr7.3:1823796-1823815 | MS.gene060386:CDS | 35.0% |
! | CTTTTACCTCTACTGTTATG+TGG | + | chr7.3:1823652-1823671 | None:intergenic | 35.0% |
! | GGTAAATGAGTGTTGTAAGT+TGG | - | chr7.3:1823387-1823406 | MS.gene060386:intron | 35.0% |
! | GTACTGATGTTAGTAATGGA+GGG | - | chr7.3:1823278-1823297 | MS.gene060386:CDS | 35.0% |
! | TGGTTTATAGGATGTTTCTG+TGG | - | chr7.3:1823895-1823914 | MS.gene060386:CDS | 35.0% |
! | TGTTGTAGACTCTGGTTTAT+AGG | - | chr7.3:1823883-1823902 | MS.gene060386:CDS | 35.0% |
! | TTATAGGATGTTTCTGTGGA+GGG | - | chr7.3:1823899-1823918 | MS.gene060386:CDS | 35.0% |
! | TTTATAGGATGTTTCTGTGG+AGG | - | chr7.3:1823898-1823917 | MS.gene060386:CDS | 35.0% |
!! | GATATGGGAAAATTTGCTGT+AGG | - | chr7.3:1823256-1823275 | MS.gene060386:CDS | 35.0% |
!! | GTAGGTACTGATGTTAGTAA+TGG | - | chr7.3:1823274-1823293 | MS.gene060386:CDS | 35.0% |
!! | GTCCGAATTGGTTGATAAAT+GGG | - | chr7.3:1823849-1823868 | MS.gene060386:CDS | 35.0% |
!! | TGTCCGAATTGGTTGATAAA+TGG | - | chr7.3:1823848-1823867 | MS.gene060386:CDS | 35.0% |
AAGACTACAGCGTGACAATT+CGG | - | chr7.3:1822793-1822812 | MS.gene060386:intron | 40.0% | |
AATAAGAGAATCCCCCGAAT+GGG | + | chr7.3:1824191-1824210 | None:intergenic | 40.0% | |
ACTTGAAAATTTAGTGGCCC+CGG | - | chr7.3:1824030-1824049 | MS.gene060386:CDS | 40.0% | |
AGTCCACGGCAATAAAATAG+AGG | - | chr7.3:1823505-1823524 | MS.gene060386:CDS | 40.0% | |
ATCCTGGTTCAACATGTATC+CGG | - | chr7.3:1824000-1824019 | MS.gene060386:CDS | 40.0% | |
ATCCTTCATCTGTTAAGGTG+AGG | + | chr7.3:1822058-1822077 | None:intergenic | 40.0% | |
ATTGGGTAGTGATCAAAAGC+CGG | + | chr7.3:1824052-1824071 | None:intergenic | 40.0% | |
CCTCCATTTCAAACCTATTC+GGG | + | chr7.3:1822673-1822692 | None:intergenic | 40.0% | |
CTTAAACTGCATTGTCGCAT+AGG | + | chr7.3:1822588-1822607 | None:intergenic | 40.0% | |
GAGGCTTTGCGTTATATTCT+TGG | - | chr7.3:1823524-1823543 | MS.gene060386:CDS | 40.0% | |
GATACATGTTGAACCAGGAT+TGG | + | chr7.3:1824000-1824019 | None:intergenic | 40.0% | |
GGATTTCTTGCGTCAGTTAT+CGG | - | chr7.3:1823745-1823764 | MS.gene060386:CDS | 40.0% | |
GTTTGAGAACGCTTGGAAAT+TGG | - | chr7.3:1824126-1824145 | MS.gene060386:CDS | 40.0% | |
TAACTCTTCTGTTACTGCTG+TGG | - | chr7.3:1823114-1823133 | MS.gene060386:CDS | 40.0% | |
TCACTTAGGAAGAGGAATTC+CGG | + | chr7.3:1823479-1823498 | None:intergenic | 40.0% | |
TCAGCATTAGCATCATACAG+AGG | + | chr7.3:1823327-1823346 | None:intergenic | 40.0% | |
TCTGCTACATGGTATCTTAC+CGG | - | chr7.3:1823680-1823699 | MS.gene060386:CDS | 40.0% | |
TGATAACTACAACATGGTGG+TGG | - | chr7.3:1822313-1822332 | MS.gene060386:CDS | 40.0% | |
TGATTCAAATTGACGCTTGC+TGG | + | chr7.3:1822362-1822381 | None:intergenic | 40.0% | |
TGTGTGCGTAACAATTACAC+GGG | - | chr7.3:1824310-1824329 | MS.gene060386:CDS | 40.0% | |
TGTTATCTGTGTGGTCTGTT+GGG | - | chr7.3:1822629-1822648 | MS.gene060386:intron | 40.0% | |
TTATACGCTTGCGCTTCTTA+AGG | + | chr7.3:1823171-1823190 | None:intergenic | 40.0% | |
TTCTGTACCAATTCCATCAC+CGG | - | chr7.3:1822249-1822268 | MS.gene060386:CDS | 40.0% | |
TTGGATGGTTGTGAAAAACG+AGG | - | chr7.3:1823815-1823834 | MS.gene060386:CDS | 40.0% | |
! | AAAACTTCGCTGGTTGATTG+AGG | + | chr7.3:1824104-1824123 | None:intergenic | 40.0% |
! | AAACTTCGCTGGTTGATTGA+GGG | + | chr7.3:1824103-1824122 | None:intergenic | 40.0% |
! | AAGAAGCGCAAGCGTATAAA+GGG | - | chr7.3:1823172-1823191 | MS.gene060386:CDS | 40.0% |
! | AAGCCTCTATTTTATTGCCG+TGG | + | chr7.3:1823511-1823530 | None:intergenic | 40.0% |
! | ATCTGCCATTCTTGTTTCAG+AGG | + | chr7.3:1822548-1822567 | None:intergenic | 40.0% |
! | ATGTAGTGTCAAGTGTTGCT+GGG | - | chr7.3:1823233-1823252 | MS.gene060386:CDS | 40.0% |
! | CAATCAACCAGCGAAGTTTT+CGG | - | chr7.3:1824104-1824123 | MS.gene060386:CDS | 40.0% |
! | CTATGTCAGGTGTTTCTACA+GGG | - | chr7.3:1823086-1823105 | MS.gene060386:intron | 40.0% |
! | GAATAGGTTTGAAATGGAGG+AGG | - | chr7.3:1822673-1822692 | MS.gene060386:intron | 40.0% |
! | TAAGAAGCGCAAGCGTATAA+AGG | - | chr7.3:1823171-1823190 | MS.gene060386:CDS | 40.0% |
! | TATGTCAGGTGTTTCTACAG+GGG | - | chr7.3:1823087-1823106 | MS.gene060386:intron | 40.0% |
! | TGAAGGATTGACTCTCAATC+TGG | - | chr7.3:1822070-1822089 | MS.gene060386:CDS | 40.0% |
! | TGGAGGGATATCCTTTTACT+TGG | - | chr7.3:1823915-1823934 | MS.gene060386:CDS | 40.0% |
! | TGGTATCTTACCGGTTACTA+CGG | - | chr7.3:1823689-1823708 | MS.gene060386:CDS | 40.0% |
!! | CTGTACCTCTGAAACAAGAA+TGG | - | chr7.3:1822540-1822559 | MS.gene060386:intron | 40.0% |
!! | GGTACTGATGTTAGTAATGG+AGG | - | chr7.3:1823277-1823296 | MS.gene060386:CDS | 40.0% |
!! | GTGGTGGTCTTGCATTATTT+TGG | - | chr7.3:1823585-1823604 | MS.gene060386:CDS | 40.0% |
!! | GTTAATAGTGTTGGTCGTAG+TGG | - | chr7.3:1823566-1823585 | MS.gene060386:CDS | 40.0% |
!!! | CAGTTATCGGCTCAGATTTT+GGG | - | chr7.3:1823758-1823777 | MS.gene060386:CDS | 40.0% |
!!! | TCAGTTATCGGCTCAGATTT+TGG | - | chr7.3:1823757-1823776 | MS.gene060386:CDS | 40.0% |
AACATATGGGGCACATTTGG+AGG | - | chr7.3:1822183-1822202 | MS.gene060386:CDS | 45.0% | |
AACCAGAGTCTACAACAGCT+TGG | + | chr7.3:1823880-1823899 | None:intergenic | 45.0% | |
AACGCTTGGAAATTGGAACC+GGG | - | chr7.3:1824133-1824152 | MS.gene060386:CDS | 45.0% | |
AATGATGTAACGGCAGGTCT+TGG | - | chr7.3:1823348-1823367 | MS.gene060386:CDS | 45.0% | |
AATGGCTGAAACCAGTGGTA+AGG | - | chr7.3:1822720-1822739 | MS.gene060386:intron | 45.0% | |
ACAACGATATACGTGGATGG+GGG | - | chr7.3:1822696-1822715 | MS.gene060386:intron | 45.0% | |
ACTGCTGACCTTAACCTTCA+AGG | - | chr7.3:1822032-1822051 | MS.gene060386:CDS | 45.0% | |
AGGAACATATGGGGCACATT+TGG | - | chr7.3:1822180-1822199 | MS.gene060386:CDS | 45.0% | |
AGGACAACGATATACGTGGA+TGG | - | chr7.3:1822693-1822712 | MS.gene060386:intron | 45.0% | |
ATAATTGTGCGGCAGACATG+TGG | - | chr7.3:1824221-1824240 | MS.gene060386:CDS | 45.0% | |
ATCCGGATACATGTTGAACC+AGG | + | chr7.3:1824005-1824024 | None:intergenic | 45.0% | |
CACTTAGGAAGAGGAATTCC+GGG | + | chr7.3:1823478-1823497 | None:intergenic | 45.0% | |
CATTTCAAACCTATTCGGGC+AGG | + | chr7.3:1822669-1822688 | None:intergenic | 45.0% | |
CGGGGGATTCTCTTATTCAT+CGG | - | chr7.3:1824194-1824213 | MS.gene060386:CDS | 45.0% | |
CTAACGTCTCACTTAGGAAG+AGG | + | chr7.3:1823487-1823506 | None:intergenic | 45.0% | |
CTAAGTGAGACGTTAGTCCA+CGG | - | chr7.3:1823491-1823510 | MS.gene060386:CDS | 45.0% | |
CTGCCCGAATAGGTTTGAAA+TGG | - | chr7.3:1822667-1822686 | MS.gene060386:intron | 45.0% | |
CTGCTGGAAACTTAGCTGTT+GGG | - | chr7.3:1822843-1822862 | MS.gene060386:intron | 45.0% | |
CTGTTATCTGTGTGGTCTGT+TGG | - | chr7.3:1822628-1822647 | MS.gene060386:intron | 45.0% | |
GAACGCTTGGAAATTGGAAC+CGG | - | chr7.3:1824132-1824151 | MS.gene060386:CDS | 45.0% | |
GAAGTAATCGCTGTCCGAAT+TGG | - | chr7.3:1823837-1823856 | MS.gene060386:CDS | 45.0% | |
GAATAAGAGAATCCCCCGAA+TGG | + | chr7.3:1824192-1824211 | None:intergenic | 45.0% | |
GACAACGATATACGTGGATG+GGG | - | chr7.3:1822695-1822714 | MS.gene060386:intron | 45.0% | |
GGACAACGATATACGTGGAT+GGG | - | chr7.3:1822694-1822713 | MS.gene060386:intron | 45.0% | |
GTAGAAACACCTGACATAGC+TGG | + | chr7.3:1823085-1823104 | None:intergenic | 45.0% | |
GTGTGCGTAACAATTACACG+GGG | - | chr7.3:1824311-1824330 | MS.gene060386:CDS | 45.0% | |
TCTCAAACCGAAAACTTCGC+TGG | + | chr7.3:1824114-1824133 | None:intergenic | 45.0% | |
TGGCAGATTCGAGTGAATGA+CGG | - | chr7.3:1822560-1822579 | MS.gene060386:intron | 45.0% | |
TGTCACGCTGTAGTCTTTGT+GGG | + | chr7.3:1822790-1822809 | None:intergenic | 45.0% | |
TGTGCGTAACAATTACACGG+GGG | - | chr7.3:1824312-1824331 | MS.gene060386:CDS | 45.0% | |
TGTTGGGCCATCAGAAAAGA+GGG | - | chr7.3:1822859-1822878 | MS.gene060386:intron | 45.0% | |
TTCACCATCTCATCAAACCC+CGG | + | chr7.3:1824154-1824173 | None:intergenic | 45.0% | |
TTGGGTAGTGATCAAAAGCC+GGG | + | chr7.3:1824051-1824070 | None:intergenic | 45.0% | |
TTGTCACGCTGTAGTCTTTG+TGG | + | chr7.3:1822791-1822810 | None:intergenic | 45.0% | |
! | AAACCAGTGGTAAGGCGTTT+AGG | - | chr7.3:1822728-1822747 | MS.gene060386:intron | 45.0% |
! | AGTGGTAAGGCGTTTAGGTA+CGG | - | chr7.3:1822733-1822752 | MS.gene060386:intron | 45.0% |
! | ATGAGATGGTGAAGGAGTGT+TGG | - | chr7.3:1824161-1824180 | MS.gene060386:CDS | 45.0% |
! | ATGTCAGGTGTTTCTACAGG+GGG | - | chr7.3:1823088-1823107 | MS.gene060386:intron | 45.0% |
! | CCCGAATAGGTTTGAAATGG+AGG | - | chr7.3:1822670-1822689 | MS.gene060386:intron | 45.0% |
! | CGAGGTTGATTCAGACCAAA+TGG | + | chr7.3:1822416-1822435 | None:intergenic | 45.0% |
! | CTGATCTGAAGTACCTTGTC+CGG | - | chr7.3:1823444-1823463 | MS.gene060386:intron | 45.0% |
! | GATGTAGTGTCAAGTGTTGC+TGG | - | chr7.3:1823232-1823251 | MS.gene060386:CDS | 45.0% |
! | GCTATGTCAGGTGTTTCTAC+AGG | - | chr7.3:1823085-1823104 | MS.gene060386:intron | 45.0% |
! | GCTGATAATGATGTAACGGC+AGG | - | chr7.3:1823342-1823361 | MS.gene060386:CDS | 45.0% |
! | GGTATCTTACCGGTTACTAC+GGG | - | chr7.3:1823690-1823709 | MS.gene060386:CDS | 45.0% |
! | TCAAGTGTTGCTGGGGATAT+GGG | - | chr7.3:1823241-1823260 | MS.gene060386:CDS | 45.0% |
! | TGGGTCTGTGGTGCATTTTA+GGG | - | chr7.3:1823777-1823796 | MS.gene060386:CDS | 45.0% |
! | TGTAGTGTCAAGTGTTGCTG+GGG | - | chr7.3:1823234-1823253 | MS.gene060386:CDS | 45.0% |
! | TTGGGTCTGTGGTGCATTTT+AGG | - | chr7.3:1823776-1823795 | MS.gene060386:CDS | 45.0% |
!! | AATAGTGTTGGTCGTAGTGG+TGG | - | chr7.3:1823569-1823588 | MS.gene060386:CDS | 45.0% |
!! | AGAGTTTGGTTTGTTCCGCT+TGG | + | chr7.3:1823004-1823023 | None:intergenic | 45.0% |
!! | AGGATTGGTTAGCCAAAGCA+CGG | + | chr7.3:1823985-1824004 | None:intergenic | 45.0% |
!! | GACAATTCGGTGCAGGAAAT+GGG | - | chr7.3:1822806-1822825 | MS.gene060386:intron | 45.0% |
!! | GTTTTCGGTTTGAGAACGCT+TGG | - | chr7.3:1824119-1824138 | MS.gene060386:CDS | 45.0% |
!! | TGACAATTCGGTGCAGGAAA+TGG | - | chr7.3:1822805-1822824 | MS.gene060386:intron | 45.0% |
AATCAACCTCGTGTGGGCAA+TGG | - | chr7.3:1822425-1822444 | MS.gene060386:intron | 50.0% | |
ACAGATGTGGCTTCACCAAG+CGG | - | chr7.3:1822986-1823005 | MS.gene060386:intron | 50.0% | |
ACGCTTGGAAATTGGAACCG+GGG | - | chr7.3:1824134-1824153 | MS.gene060386:CDS | 50.0% | |
AGCCAAGCTGTTGTAGACTC+TGG | - | chr7.3:1823875-1823894 | MS.gene060386:CDS | 50.0% | |
AGGTGAGGCCTTGAAGGTTA+AGG | + | chr7.3:1822043-1822062 | None:intergenic | 50.0% | |
AGTTGGAACTGCCGAGGTTT+AGG | - | chr7.3:1823404-1823423 | MS.gene060386:intron | 50.0% | |
ATATACGTGGATGGGGGGAA+TGG | - | chr7.3:1822702-1822721 | MS.gene060386:intron | 50.0% | |
ATCAGGTTCAGCTTGGGTGA+TGG | + | chr7.3:1822225-1822244 | None:intergenic | 50.0% | |
CAACACTCATTTACCTCGGC+AGG | + | chr7.3:1823382-1823401 | None:intergenic | 50.0% | |
CAACGATATACGTGGATGGG+GGG | - | chr7.3:1822697-1822716 | MS.gene060386:intron | 50.0% | |
CAGACATGTGGACTTGGAGT+CGG | - | chr7.3:1824233-1824252 | MS.gene060386:CDS | 50.0% | |
CAGGTGCATCAGCTACCATT+TGG | - | chr7.3:1822398-1822417 | MS.gene060386:intron | 50.0% | |
CGACAATGAGGATGTCACTG+TGG | - | chr7.3:1823138-1823157 | MS.gene060386:CDS | 50.0% | |
CGCTGTAGTCTTTGTGGGAT+AGG | + | chr7.3:1822785-1822804 | None:intergenic | 50.0% | |
CTGACGCAAGAAATCCCATG+CGG | + | chr7.3:1823741-1823760 | None:intergenic | 50.0% | |
CTGTTAAGGTGAGGCCTTGA+AGG | + | chr7.3:1822049-1822068 | None:intergenic | 50.0% | |
CTGTTGGGCCATCAGAAAAG+AGG | - | chr7.3:1822858-1822877 | MS.gene060386:intron | 50.0% | |
GAGGAGGACAACGATATACG+TGG | - | chr7.3:1822689-1822708 | MS.gene060386:intron | 50.0% | |
GCTGCTGGAAACTTAGCTGT+TGG | - | chr7.3:1822842-1822861 | MS.gene060386:intron | 50.0% | |
GGAATTCCGGGTTGTAACTC+CGG | + | chr7.3:1823466-1823485 | None:intergenic | 50.0% | |
GGCCTCACCTTAACAGATGA+AGG | - | chr7.3:1822053-1822072 | MS.gene060386:CDS | 50.0% | |
GGGGTTTGATGAGATGGTGA+AGG | - | chr7.3:1824153-1824172 | MS.gene060386:CDS | 50.0% | |
GGTCTGAATCAACCTCGTGT+GGG | - | chr7.3:1822419-1822438 | MS.gene060386:intron | 50.0% | |
GTACCTAAACGCCTTACCAC+TGG | + | chr7.3:1822734-1822753 | None:intergenic | 50.0% | |
GTACGGCTGCTACAAACATC+TGG | - | chr7.3:1822750-1822769 | MS.gene060386:intron | 50.0% | |
GTGATGGTAACACGTTTCCC+TGG | + | chr7.3:1822209-1822228 | None:intergenic | 50.0% | |
GTGCTTTGGCTAACCAATCC+TGG | - | chr7.3:1823984-1824003 | MS.gene060386:CDS | 50.0% | |
GTTACTACGGGTACCCTGAA+GGG | - | chr7.3:1823702-1823721 | MS.gene060386:CDS | 50.0% | |
TACTGCTGTGGACGACAATG+AGG | - | chr7.3:1823126-1823145 | MS.gene060386:CDS | 50.0% | |
TCAGATCAGGAACTACGCTC+AGG | + | chr7.3:1823433-1823452 | None:intergenic | 50.0% | |
TCATCTGGACATATGGGTGC+AGG | - | chr7.3:1822379-1822398 | MS.gene060386:CDS | 50.0% | |
TGAGTCTCCATAGTGAGTCG+CGG | + | chr7.3:1823034-1823053 | None:intergenic | 50.0% | |
TGCTACAAACATCTGGCTGC+AGG | - | chr7.3:1822757-1822776 | MS.gene060386:intron | 50.0% | |
TGGGTAGTGATCAAAAGCCG+GGG | + | chr7.3:1824050-1824069 | None:intergenic | 50.0% | |
TGGTCTGAATCAACCTCGTG+TGG | - | chr7.3:1822418-1822437 | MS.gene060386:intron | 50.0% | |
TTACTACGGGTACCCTGAAG+GGG | - | chr7.3:1823703-1823722 | MS.gene060386:CDS | 50.0% | |
! | AGCGCAAGAACGAGTGGATT+AGG | + | chr7.3:1823061-1823080 | None:intergenic | 50.0% |
! | CGGACAAGGTACTTCAGATC+AGG | + | chr7.3:1823446-1823465 | None:intergenic | 50.0% |
! | CGTGGACTAACGTCTCACTT+AGG | + | chr7.3:1823493-1823512 | None:intergenic | 50.0% |
! | GGGGTGTTCTGTTATCTGTG+TGG | - | chr7.3:1822620-1822639 | MS.gene060386:intron | 50.0% |
! | GGGTCTGTGGTGCATTTTAG+GGG | - | chr7.3:1823778-1823797 | MS.gene060386:CDS | 50.0% |
! | GGTCAACATGTTTCTGCTGC+TGG | - | chr7.3:1822827-1822846 | MS.gene060386:intron | 50.0% |
! | GTCAAGTGTTGCTGGGGATA+TGG | - | chr7.3:1823240-1823259 | MS.gene060386:CDS | 50.0% |
! | GTTGTAAGTTGGAACTGCCG+AGG | - | chr7.3:1823398-1823417 | MS.gene060386:intron | 50.0% |
! | TTCAGGGTACCCGTAGTAAC+CGG | + | chr7.3:1823702-1823721 | None:intergenic | 50.0% |
CCTCGTGTGGGCAATGGAAT+CGG | - | chr7.3:1822431-1822450 | MS.gene060386:intron | 55.0% | |
CCTTGTCCGGAGTTACAACC+CGG | - | chr7.3:1823457-1823476 | MS.gene060386:intron | 55.0% | |
CGCTCAGGCTACCTAAACCT+CGG | + | chr7.3:1823418-1823437 | None:intergenic | 55.0% | |
CTGACAAGACCTGCCCGAAT+AGG | - | chr7.3:1822657-1822676 | MS.gene060386:intron | 55.0% | |
CTTGCGCTACCAGCTATGTC+AGG | - | chr7.3:1823073-1823092 | MS.gene060386:intron | 55.0% | |
GCGTACGGTGCAGCATGATT+GGG | + | chr7.3:1824069-1824088 | None:intergenic | 55.0% | |
GGAACCGGGGTTTGATGAGA+TGG | - | chr7.3:1824147-1824166 | MS.gene060386:CDS | 55.0% | |
GGTTACTACGGGTACCCTGA+AGG | - | chr7.3:1823701-1823720 | MS.gene060386:CDS | 55.0% | |
TACTACGGGTACCCTGAAGG+GGG | - | chr7.3:1823704-1823723 | MS.gene060386:CDS | 55.0% | |
TGCGTACGGTGCAGCATGAT+TGG | + | chr7.3:1824070-1824089 | None:intergenic | 55.0% | |
! | ACGCTTGCTGGAACAACTCC+AGG | + | chr7.3:1822350-1822369 | None:intergenic | 55.0% |
! | GTGGTGGAACGTATTGCTCC+TGG | - | chr7.3:1822329-1822348 | MS.gene060386:CDS | 55.0% |
!! | ACAGCGTGACAATTCGGTGC+AGG | - | chr7.3:1822799-1822818 | MS.gene060386:intron | 55.0% |
!! | AGTGTTGGCTCTCCCATTCG+GGG | - | chr7.3:1824176-1824195 | MS.gene060386:CDS | 55.0% |
!! | CGGCTCAGATTTTGGGTCTG+TGG | - | chr7.3:1823765-1823784 | MS.gene060386:CDS | 55.0% |
!! | CGTCAAGCCGGTGATGGAAT+TGG | + | chr7.3:1822259-1822278 | None:intergenic | 55.0% |
!! | GAGTGTTGGCTCTCCCATTC+GGG | - | chr7.3:1824175-1824194 | MS.gene060386:CDS | 55.0% |
!! | GGAGTGTTGGCTCTCCCATT+CGG | - | chr7.3:1824174-1824193 | MS.gene060386:CDS | 55.0% |
AACGGCAGGTCTTGGAGTCC+AGG | - | chr7.3:1823356-1823375 | MS.gene060386:CDS | 60.0% | |
AGAGCGGCTAGACCGTGCTT+TGG | - | chr7.3:1823970-1823989 | MS.gene060386:CDS | 60.0% | |
AGGGACGCCTCACTTGCGTA+CGG | + | chr7.3:1824084-1824103 | None:intergenic | 60.0% | |
ATGGGGCACATTTGGAGGCC+AGG | - | chr7.3:1822188-1822207 | MS.gene060386:CDS | 60.0% | |
CACGTCTACGTCCCCCTTCA+GGG | + | chr7.3:1823718-1823737 | None:intergenic | 60.0% | |
CCGATTCCATTGCCCACACG+AGG | + | chr7.3:1822434-1822453 | None:intergenic | 60.0% | |
CCGGGTTGTAACTCCGGACA+AGG | + | chr7.3:1823460-1823479 | None:intergenic | 60.0% | |
CTCATTTACCTCGGCAGGCC+TGG | + | chr7.3:1823377-1823396 | None:intergenic | 60.0% | |
CTGCAAAGGTCCTGGAGGAG+GGG | - | chr7.3:1822279-1822298 | MS.gene060386:CDS | 60.0% | |
GAGTCTTGGTACACCCCGTG+CGG | - | chr7.3:1823943-1823962 | MS.gene060386:CDS | 60.0% | |
GCTGCAAAGGTCCTGGAGGA+GGG | - | chr7.3:1822278-1822297 | MS.gene060386:CDS | 60.0% | |
GCTTGACGCTGCAAAGGTCC+TGG | - | chr7.3:1822271-1822290 | MS.gene060386:CDS | 60.0% | |
GGACCTTTGCAGCGTCAAGC+CGG | + | chr7.3:1822271-1822290 | None:intergenic | 60.0% | |
GGGGGAATGGCTGAAACCAG+TGG | - | chr7.3:1822715-1822734 | MS.gene060386:intron | 60.0% | |
GTCGCGGCAGAGACAGAGTT+TGG | + | chr7.3:1823018-1823037 | None:intergenic | 60.0% | |
GTCTCTGCCGCGACTCACTA+TGG | - | chr7.3:1823024-1823043 | MS.gene060386:intron | 60.0% | |
GTGCGGCAGACATGTGGACT+TGG | - | chr7.3:1824227-1824246 | MS.gene060386:CDS | 60.0% | |
TGACGCTGCAAAGGTCCTGG+AGG | - | chr7.3:1822274-1822293 | MS.gene060386:CDS | 60.0% | |
TGCTGCACCGTACGCAAGTG+AGG | - | chr7.3:1824074-1824093 | MS.gene060386:CDS | 60.0% | |
TGGGGCACATTTGGAGGCCA+GGG | - | chr7.3:1822189-1822208 | MS.gene060386:CDS | 60.0% | |
TTGCAGCGTCAAGCCGGTGA+TGG | + | chr7.3:1822265-1822284 | None:intergenic | 60.0% | |
! | GCCAGCGCCCTCTTTTCTGA+TGG | + | chr7.3:1822869-1822888 | None:intergenic | 60.0% |
! | GCCATCAGAAAAGAGGGCGC+TGG | - | chr7.3:1822865-1822884 | MS.gene060386:intron | 60.0% |
! | GCTGGTAGCGCAAGAACGAG+TGG | + | chr7.3:1823067-1823086 | None:intergenic | 60.0% |
!! | GTGTTGGCTCTCCCATTCGG+GGG | - | chr7.3:1824177-1824196 | MS.gene060386:CDS | 60.0% |
!! | TCACCGGCTTGACGCTGCAA+AGG | - | chr7.3:1822265-1822284 | MS.gene060386:CDS | 60.0% |
!! | TCAGAAAAGAGGGCGCTGGC+AGG | - | chr7.3:1822869-1822888 | MS.gene060386:intron | 60.0% |
CGCTGCAAAGGTCCTGGAGG+AGG | - | chr7.3:1822277-1822296 | MS.gene060386:CDS | 65.0% | |
CTAGCCGCTCTTCGACCGCA+CGG | + | chr7.3:1823961-1823980 | None:intergenic | 65.0% | |
GCACGTCTACGTCCCCCTTC+AGG | + | chr7.3:1823719-1823738 | None:intergenic | 65.0% | |
GGGACGTAGACGTGCCGCAT+GGG | - | chr7.3:1823724-1823743 | MS.gene060386:CDS | 65.0% | |
TAGCCGCTCTTCGACCGCAC+GGG | + | chr7.3:1823960-1823979 | None:intergenic | 65.0% | |
AGCCGCTCTTCGACCGCACG+GGG | + | chr7.3:1823959-1823978 | None:intergenic | 70.0% | |
CACCCCGTGCGGTCGAAGAG+CGG | - | chr7.3:1823954-1823973 | MS.gene060386:CDS | 70.0% | |
CTTGGAGTCCAGGCCTGCCG+AGG | - | chr7.3:1823366-1823385 | MS.gene060386:intron | 70.0% | |
GGGGACGTAGACGTGCCGCA+TGG | - | chr7.3:1823723-1823742 | MS.gene060386:CDS | 70.0% | |
AGAGCCACGGCCCCTCCTCC+AGG | + | chr7.3:1822292-1822311 | None:intergenic | 75.0% | |
AGGTCCTGGAGGAGGGGCCG+TGG | - | chr7.3:1822285-1822304 | MS.gene060386:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 1822026 | 1824345 | 1822026 | ID=MS.gene060386 |
chr7.3 | mRNA | 1822026 | 1824345 | 1822026 | ID=MS.gene060386.t1;Parent=MS.gene060386 |
chr7.3 | exon | 1823481 | 1824345 | 1823481 | ID=MS.gene060386.t1.exon1;Parent=MS.gene060386.t1 |
chr7.3 | CDS | 1823481 | 1824345 | 1823481 | ID=cds.MS.gene060386.t1;Parent=MS.gene060386.t1 |
chr7.3 | exon | 1823094 | 1823381 | 1823094 | ID=MS.gene060386.t1.exon2;Parent=MS.gene060386.t1 |
chr7.3 | CDS | 1823094 | 1823381 | 1823094 | ID=cds.MS.gene060386.t1;Parent=MS.gene060386.t1 |
chr7.3 | exon | 1822026 | 1822399 | 1822026 | ID=MS.gene060386.t1.exon3;Parent=MS.gene060386.t1 |
chr7.3 | CDS | 1822026 | 1822399 | 1822026 | ID=cds.MS.gene060386.t1;Parent=MS.gene060386.t1 |
Gene Sequence |
Protein sequence |