AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060386


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060386.t1 MTR_3g053920 41.367 278 95 3 1 275 1 213 1.72e-68 221
MS.gene060386.t1 MTR_2g061500 58.915 129 53 0 1 129 1 129 1.21e-49 167
MS.gene060386.t1 MTR_1g100687 47.581 124 63 1 385 506 108 231 6.39e-35 131
MS.gene060386.t1 MTR_6g033215 33.503 197 124 3 5 199 103 294 6.63e-35 132
MS.gene060386.t1 MTR_8g463110 37.624 202 104 2 329 508 94 295 1.96e-34 137
MS.gene060386.t1 MTR_4g103530 59.551 89 36 0 59 147 5 93 3.36e-34 127
MS.gene060386.t1 MTR_0010s0370 34.286 175 111 2 7 177 3 177 3.37e-31 119
MS.gene060386.t1 MTR_0010s0350 34.286 175 111 2 7 177 3 177 3.37e-31 119
MS.gene060386.t1 MTR_7g011710 58.140 86 36 0 55 140 1 86 4.62e-31 118
MS.gene060386.t1 MTR_3g044860 46.774 124 40 1 385 508 64 161 5.70e-28 114
MS.gene060386.t1 MTR_6g034215 51.961 102 49 0 407 508 198 299 1.48e-25 107
MS.gene060386.t1 MTR_4g020630 45.968 124 59 1 385 508 116 231 1.09e-24 107
MS.gene060386.t1 MTR_0042s0130 40.833 120 71 0 385 504 211 330 3.44e-24 103
MS.gene060386.t1 MTR_6g009010 48.780 82 42 0 385 466 179 260 2.64e-22 96.7
MS.gene060386.t1 MTR_1g051330 37.815 119 69 2 386 502 328 443 4.35e-20 94.4
MS.gene060386.t1 MTR_1g036720 35.185 108 68 1 7 112 3 110 5.83e-16 74.3
MS.gene060386.t1 MTR_1g062290 47.761 67 35 0 399 465 1 67 1.61e-15 75.1
MS.gene060386.t1 MTR_8g470880 56.897 58 25 0 385 442 467 524 6.66e-15 77.8
MS.gene060386.t1 MTR_2g055450 32.759 116 63 2 385 500 228 328 2.34e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060386.t1 AT2G17920 28.472 144 99 2 77 218 80 221 5.76e-15 76.3
MS.gene060386.t1 AT5G36228 25.773 194 139 3 36 226 39 230 1.60e-14 75.5
MS.gene060386.t1 AT3G57587 23.721 215 158 3 8 218 9 221 1.79e-14 75.5
MS.gene060386.t1 AT2G41590 25.405 185 134 2 36 218 39 221 8.09e-14 73.6
MS.gene060386.t1 AT5G18636 25.405 185 134 2 36 218 39 221 2.04e-13 72.0
MS.gene060386.t1 AT5G25200 25.405 185 134 2 36 218 39 221 2.11e-13 72.0
MS.gene060386.t1 AT2G02103 24.865 185 135 2 36 218 39 221 7.86e-13 70.5
MS.gene060386.t1 AT3G31430 24.312 218 152 6 2 215 103 311 3.84e-12 68.2

Find 160 sgRNAs with CRISPR-Local

Find 253 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTGAGAACGCTTGGAAAT+TGG 0.230388 7.3:-1822223 MS.gene060386:CDS
TCCTCCATTTCAAACCTATT+CGG 0.284862 7.3:+1823678 None:intergenic
TGATTCAAATTGACGCTTGC+TGG 0.292360 7.3:+1823990 None:intergenic
GTCAAGTGTTGCTGGGGATA+TGG 0.297582 7.3:-1823109 MS.gene060386:CDS
TAAGAAGCGCAAGCGTATAA+AGG 0.310256 7.3:-1823178 MS.gene060386:CDS
CAATTACTTCAAGGAACATA+TGG 0.315398 7.3:-1824180 MS.gene060386:CDS
ATTCTTGATCACTGCTTAAT+AGG 0.316199 7.3:-1824233 MS.gene060386:CDS
CTGTTATCTGTGTGGTCTGT+TGG 0.320720 7.3:-1823721 MS.gene060386:CDS
GAGTGTTGGCTCTCCCATTC+GGG 0.331060 7.3:-1822174 MS.gene060386:CDS
TGACAATTCGGTGCAGGAAA+TGG 0.344953 7.3:-1823544 MS.gene060386:CDS
CCTCCATTTCAAACCTATTC+GGG 0.344988 7.3:+1823679 None:intergenic
AGGAACATATGGGGCACATT+TGG 0.350744 7.3:-1824169 MS.gene060386:CDS
TGCGTACGGTGCAGCATGAT+TGG 0.364784 7.3:+1822282 None:intergenic
AAACCAGTGGTAAGGCGTTT+AGG 0.369074 7.3:-1823621 MS.gene060386:CDS
ATTTGAATCATCTGGACATA+TGG 0.369587 7.3:-1823977 MS.gene060386:CDS
GGAGTGTTGGCTCTCCCATT+CGG 0.373313 7.3:-1822175 MS.gene060386:CDS
AGAACTATAATGAGTATTCC+TGG 0.377651 7.3:+1823863 None:intergenic
CTGTTAAGGTGAGGCCTTGA+AGG 0.386785 7.3:+1824303 None:intergenic
GATGTAGTGTCAAGTGTTGC+TGG 0.386829 7.3:-1823117 MS.gene060386:CDS
TGTTATCTGTGTGGTCTGTT+GGG 0.391407 7.3:-1823720 MS.gene060386:CDS
GTCTCTGCCGCGACTCACTA+TGG 0.400702 7.3:-1823325 MS.gene060386:CDS
TTGTCACGCTGTAGTCTTTG+TGG 0.403937 7.3:+1823561 None:intergenic
AGGTCCTGGAGGAGGGGCCG+TGG 0.406456 7.3:-1824064 MS.gene060386:CDS
GTCGCGGCAGAGACAGAGTT+TGG 0.408159 7.3:+1823334 None:intergenic
GATTCGTTTCAATTACTTCA+AGG 0.410002 7.3:-1824189 MS.gene060386:CDS
ATCTGATTGAATTTGATTCC+AGG 0.410945 7.3:-1823881 MS.gene060386:CDS
TTATACGCTTGCGCTTCTTA+AGG 0.420511 7.3:+1823181 None:intergenic
AGTTTAAGTATGAAAAGCTT+GGG 0.420862 7.3:-1823749 MS.gene060386:CDS
AGTCAATCCTTCATCTGTTA+AGG 0.421004 7.3:+1824289 None:intergenic
CTGACAAGACCTGCCCGAAT+AGG 0.423285 7.3:-1823692 MS.gene060386:CDS
GCTTGACGCTGCAAAGGTCC+TGG 0.425447 7.3:-1824078 MS.gene060386:CDS
CGCTGCAAAGGTCCTGGAGG+AGG 0.427387 7.3:-1824072 MS.gene060386:CDS
CGTCAAGCCGGTGATGGAAT+TGG 0.429537 7.3:+1824093 None:intergenic
GCTATGTCAGGTGTTTCTAC+AGG 0.430883 7.3:-1823264 MS.gene060386:CDS
AGCGCAAGAACGAGTGGATT+AGG 0.435665 7.3:+1823291 None:intergenic
GACAATTCGGTGCAGGAAAT+GGG 0.439958 7.3:-1823543 MS.gene060386:CDS
TGCTACACTTGAAAATTTAG+TGG 0.444330 7.3:-1822325 MS.gene060386:CDS
GAACGCTTGGAAATTGGAAC+CGG 0.444363 7.3:-1822217 MS.gene060386:CDS
AGAGCCACGGCCCCTCCTCC+AGG 0.445767 7.3:+1824060 None:intergenic
AGGTGAGGCCTTGAAGGTTA+AGG 0.446133 7.3:+1824309 None:intergenic
TGAAGGATTGACTCTCAATC+TGG 0.446501 7.3:-1824279 MS.gene060386:CDS
GGTCAACATGTTTCTGCTGC+TGG 0.446617 7.3:-1823522 MS.gene060386:CDS
AATTACTTCAAGGAACATAT+GGG 0.448241 7.3:-1824179 MS.gene060386:CDS
AAGCGTCAATTTGAATCATC+TGG 0.454920 7.3:-1823985 MS.gene060386:CDS
CTGCTGGAAACTTAGCTGTT+GGG 0.457786 7.3:-1823506 MS.gene060386:CDS
ACTGCTGACCTTAACCTTCA+AGG 0.458508 7.3:-1824317 MS.gene060386:CDS
AAAACTTCGCTGGTTGATTG+AGG 0.462741 7.3:+1822248 None:intergenic
AAGAAGCGCAAGCGTATAAA+GGG 0.462842 7.3:-1823177 MS.gene060386:CDS
TTCTGTACCAATTCCATCAC+CGG 0.463057 7.3:-1824100 MS.gene060386:CDS
CCTCGTGTGGGCAATGGAAT+CGG 0.468059 7.3:-1823918 MS.gene060386:CDS
TCAAGTGTTGCTGGGGATAT+GGG 0.469433 7.3:-1823108 MS.gene060386:CDS
CAGGTGCATCAGCTACCATT+TGG 0.471899 7.3:-1823951 MS.gene060386:CDS
CTGCCCGAATAGGTTTGAAA+TGG 0.473016 7.3:-1823682 MS.gene060386:CDS
GTGCTTTGGCTAACCAATCC+TGG 0.476033 7.3:-1822365 MS.gene060386:CDS
CGCTGTAGTCTTTGTGGGAT+AGG 0.476099 7.3:+1823567 None:intergenic
AAGACTACAGCGTGACAATT+CGG 0.481038 7.3:-1823556 MS.gene060386:CDS
GCTGCTGGAAACTTAGCTGT+TGG 0.481876 7.3:-1823507 MS.gene060386:CDS
TGTCACGCTGTAGTCTTTGT+GGG 0.483422 7.3:+1823562 None:intergenic
ATGGGGCACATTTGGAGGCC+AGG 0.484037 7.3:-1824161 MS.gene060386:CDS
TTGGGTAGTGATCAAAAGCC+GGG 0.484403 7.3:+1822301 None:intergenic
GCGTACGGTGCAGCATGATT+GGG 0.486016 7.3:+1822283 None:intergenic
TTTGAATCATCTGGACATAT+GGG 0.486363 7.3:-1823976 MS.gene060386:CDS
AAACTTCGCTGGTTGATTGA+GGG 0.490663 7.3:+1822249 None:intergenic
GTACGGCTGCTACAAACATC+TGG 0.501396 7.3:-1823599 MS.gene060386:CDS
ATGTAGTGTCAAGTGTTGCT+GGG 0.501530 7.3:-1823116 MS.gene060386:CDS
AATCAACCTCGTGTGGGCAA+TGG 0.504591 7.3:-1823924 MS.gene060386:CDS
ACGCTTGCTGGAACAACTCC+AGG 0.505536 7.3:+1824002 None:intergenic
CAGTTTAAGTATGAAAAGCT+TGG 0.505746 7.3:-1823750 MS.gene060386:CDS
ATCCTGGTTCAACATGTATC+CGG 0.505994 7.3:-1822349 MS.gene060386:CDS
CTTGCGCTACCAGCTATGTC+AGG 0.506354 7.3:-1823276 MS.gene060386:CDS
TGCTACAAACATCTGGCTGC+AGG 0.507028 7.3:-1823592 MS.gene060386:CDS
AACATATGGGGCACATTTGG+AGG 0.508581 7.3:-1824166 MS.gene060386:CDS
GGCCTCACCTTAACAGATGA+AGG 0.509460 7.3:-1824296 MS.gene060386:CDS
TTGCAGCGTCAAGCCGGTGA+TGG 0.511141 7.3:+1824087 None:intergenic
ACTTGAAAATTTAGTGGCCC+CGG 0.516066 7.3:-1822319 MS.gene060386:CDS
CTATGTCAGGTGTTTCTACA+GGG 0.516900 7.3:-1823263 MS.gene060386:CDS
AGAGTTTGGTTTGTTCCGCT+TGG 0.517520 7.3:+1823348 None:intergenic
CATTTCAAACCTATTCGGGC+AGG 0.517796 7.3:+1823683 None:intergenic
GTGCGGCAGACATGTGGACT+TGG 0.520999 7.3:-1822122 MS.gene060386:CDS
TGGGGCACATTTGGAGGCCA+GGG 0.522434 7.3:-1824160 MS.gene060386:CDS
AGAGCGGCTAGACCGTGCTT+TGG 0.522451 7.3:-1822379 MS.gene060386:CDS
CGAGGTTGATTCAGACCAAA+TGG 0.522878 7.3:+1823936 None:intergenic
GCTGCAAAGGTCCTGGAGGA+GGG 0.523944 7.3:-1824071 MS.gene060386:CDS
TCAGAAAAGAGGGCGCTGGC+AGG 0.527162 7.3:-1823480 MS.gene060386:intron
CTTAAACTGCATTGTCGCAT+AGG 0.529353 7.3:+1823764 None:intergenic
ATCTGCCATTCTTGTTTCAG+AGG 0.529692 7.3:+1823804 None:intergenic
GATACATGTTGAACCAGGAT+TGG 0.529740 7.3:+1822352 None:intergenic
CTGTACCTCTGAAACAAGAA+TGG 0.531454 7.3:-1823809 MS.gene060386:CDS
TCTCAAACCGAAAACTTCGC+TGG 0.535041 7.3:+1822238 None:intergenic
CTCATTATAGTTCTTATATG+CGG 0.535437 7.3:-1823854 MS.gene060386:CDS
GTGGTGGAACGTATTGCTCC+TGG 0.539348 7.3:-1824020 MS.gene060386:CDS
GTGATGGTAACACGTTTCCC+TGG 0.544874 7.3:+1824143 None:intergenic
GTAGAAACACCTGACATAGC+TGG 0.551635 7.3:+1823267 None:intergenic
AATGGAATCGGTAAGTATCT+CGG 0.552095 7.3:-1823906 MS.gene060386:CDS
GTACCTAAACGCCTTACCAC+TGG 0.552187 7.3:+1823618 None:intergenic
ATTGGGTAGTGATCAAAAGC+CGG 0.553323 7.3:+1822300 None:intergenic
TGGTCTGAATCAACCTCGTG+TGG 0.555157 7.3:-1823931 MS.gene060386:CDS
CTGTTGGGCCATCAGAAAAG+AGG 0.555917 7.3:-1823491 MS.gene060386:CDS
GGACAACGATATACGTGGAT+GGG 0.556942 7.3:-1823655 MS.gene060386:CDS
GCCATCAGAAAAGAGGGCGC+TGG 0.557022 7.3:-1823484 MS.gene060386:CDS
CCCGAATAGGTTTGAAATGG+AGG 0.558785 7.3:-1823679 MS.gene060386:CDS
TCACCGGCTTGACGCTGCAA+AGG 0.561928 7.3:-1824084 MS.gene060386:CDS
GGACCTTTGCAGCGTCAAGC+CGG 0.566508 7.3:+1824081 None:intergenic
GGAACCGGGGTTTGATGAGA+TGG 0.567933 7.3:-1822202 MS.gene060386:CDS
AATGGCTGAAACCAGTGGTA+AGG 0.570704 7.3:-1823629 MS.gene060386:CDS
AACGCTTGGAAATTGGAACC+GGG 0.575909 7.3:-1822216 MS.gene060386:CDS
GACAACGATATACGTGGATG+GGG 0.577292 7.3:-1823654 MS.gene060386:CDS
ATCAGGTTCAGCTTGGGTGA+TGG 0.578837 7.3:+1824127 None:intergenic
ATGAGATGGTGAAGGAGTGT+TGG 0.583975 7.3:-1822188 MS.gene060386:CDS
ACAGCGTGACAATTCGGTGC+AGG 0.588348 7.3:-1823550 MS.gene060386:CDS
TCATCTGGACATATGGGTGC+AGG 0.592215 7.3:-1823970 MS.gene060386:CDS
TGATAACTACAACATGGTGG+TGG 0.594242 7.3:-1824036 MS.gene060386:CDS
CCGATTCCATTGCCCACACG+AGG 0.595212 7.3:+1823918 None:intergenic
ACAACGATATACGTGGATGG+GGG 0.595348 7.3:-1823653 MS.gene060386:CDS
ATAATTGTGCGGCAGACATG+TGG 0.595812 7.3:-1822128 MS.gene060386:CDS
AGTGGTAAGGCGTTTAGGTA+CGG 0.596678 7.3:-1823616 MS.gene060386:CDS
CAACGATATACGTGGATGGG+GGG 0.601853 7.3:-1823652 MS.gene060386:CDS
CTGCAAAGGTCCTGGAGGAG+GGG 0.601917 7.3:-1824070 MS.gene060386:CDS
CAGACATGTGGACTTGGAGT+CGG 0.602081 7.3:-1822116 MS.gene060386:CDS
TGCTGCACCGTACGCAAGTG+AGG 0.606814 7.3:-1822275 MS.gene060386:CDS
TTGTGTGCGTAACAATTACA+CGG 0.608905 7.3:-1822040 MS.gene060386:CDS
AGGACAACGATATACGTGGA+TGG 0.610109 7.3:-1823656 MS.gene060386:CDS
GTTAAGGTCAGCAGTAGACA+TGG 0.613037 7.3:+1824325 None:intergenic
GATATGGGAAAATTTGCTGT+AGG 0.614030 7.3:-1823093 MS.gene060386:intron
TAACTCTTCTGTTACTGCTG+TGG 0.614847 7.3:-1823235 MS.gene060386:CDS
GAATAGGTTTGAAATGGAGG+AGG 0.616184 7.3:-1823676 MS.gene060386:CDS
AGTGTTGGCTCTCCCATTCG+GGG 0.616801 7.3:-1822173 MS.gene060386:CDS
ATCCGGATACATGTTGAACC+AGG 0.617357 7.3:+1822347 None:intergenic
TTCACCATCTCATCAAACCC+CGG 0.619721 7.3:+1822198 None:intergenic
GCTGGTAGCGCAAGAACGAG+TGG 0.620176 7.3:+1823285 None:intergenic
ATCCTTCATCTGTTAAGGTG+AGG 0.620666 7.3:+1824294 None:intergenic
AAGAATTTGAGTAGCATCAG+TGG 0.622026 7.3:+1824250 None:intergenic
TGTGTGCGTAACAATTACAC+GGG 0.626212 7.3:-1822039 MS.gene060386:CDS
TGTTGGGCCATCAGAAAAGA+GGG 0.632261 7.3:-1823490 MS.gene060386:CDS
GGGGTGTTCTGTTATCTGTG+TGG 0.635538 7.3:-1823729 MS.gene060386:CDS
TGGCAGATTCGAGTGAATGA+CGG 0.637045 7.3:-1823789 MS.gene060386:CDS
GTGTTGGCTCTCCCATTCGG+GGG 0.640757 7.3:-1822172 MS.gene060386:CDS
GGGGTTTGATGAGATGGTGA+AGG 0.643827 7.3:-1822196 MS.gene060386:CDS
TACTGCTGTGGACGACAATG+AGG 0.646530 7.3:-1823223 MS.gene060386:CDS
ACAGATGTGGCTTCACCAAG+CGG 0.646811 7.3:-1823363 MS.gene060386:intron
ATGTCAGGTGTTTCTACAGG+GGG 0.648528 7.3:-1823261 MS.gene060386:CDS
TCATCGGCAAAATAATTGTG+CGG 0.653285 7.3:-1822139 MS.gene060386:CDS
AGGATTGGTTAGCCAAAGCA+CGG 0.657650 7.3:+1822367 None:intergenic
AGGGACGCCTCACTTGCGTA+CGG 0.658444 7.3:+1822268 None:intergenic
TGACGCTGCAAAGGTCCTGG+AGG 0.664164 7.3:-1824075 MS.gene060386:CDS
GGTCTGAATCAACCTCGTGT+GGG 0.665930 7.3:-1823930 MS.gene060386:CDS
ATTACTTCAAGGAACATATG+GGG 0.666307 7.3:-1824178 MS.gene060386:CDS
TGAGTCTCCATAGTGAGTCG+CGG 0.674256 7.3:+1823318 None:intergenic
TTGTAGTTATCATAGAGCCA+CGG 0.675083 7.3:+1824047 None:intergenic
GTTTAAGTATGAAAAGCTTG+GGG 0.676485 7.3:-1823748 MS.gene060386:CDS
ACGCTTGGAAATTGGAACCG+GGG 0.681406 7.3:-1822215 MS.gene060386:CDS
GTGTGCGTAACAATTACACG+GGG 0.689022 7.3:-1822038 MS.gene060386:CDS
TGGGTAGTGATCAAAAGCCG+GGG 0.697532 7.3:+1822302 None:intergenic
TGTAGTGTCAAGTGTTGCTG+GGG 0.700918 7.3:-1823115 MS.gene060386:CDS
TATGTCAGGTGTTTCTACAG+GGG 0.704600 7.3:-1823262 MS.gene060386:CDS
GCTCTATGATAACTACAACA+TGG 0.711588 7.3:-1824042 MS.gene060386:CDS
CTATGATAACTACAACATGG+TGG 0.722488 7.3:-1824039 MS.gene060386:CDS
GAGGAGGACAACGATATACG+TGG 0.733300 7.3:-1823660 MS.gene060386:CDS
CGACAATGAGGATGTCACTG+TGG 0.777920 7.3:-1823211 MS.gene060386:CDS
TGTGCGTAACAATTACACGG+GGG 0.843785 7.3:-1822037 MS.gene060386:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGATAGAGAATTAAGT+TGG + chr7.3:1822952-1822971 None:intergenic 20.0%
!!! TTCTATAAAGTCTCATATTT+TGG - chr7.3:1822922-1822941 MS.gene060386:intron 20.0%
!!! TTTTGATAGAGAATTAAGTT+GGG + chr7.3:1822951-1822970 None:intergenic 20.0%
! AATTACTTCAAGGAACATAT+GGG - chr7.3:1822170-1822189 MS.gene060386:CDS 25.0%
! AATTGGTACAGAAAAAAATC+AGG + chr7.3:1822242-1822261 None:intergenic 25.0%
! AGTTTAAGTATGAAAAGCTT+GGG - chr7.3:1822600-1822619 MS.gene060386:intron 25.0%
! CTCATTATAGTTCTTATATG+CGG - chr7.3:1822495-1822514 MS.gene060386:intron 25.0%
!! TAATGCTGATAATGATGTAA+CGG - chr7.3:1823338-1823357 MS.gene060386:CDS 25.0%
AAAAAAATCAGGTTCAGCTT+GGG + chr7.3:1822231-1822250 None:intergenic 30.0%
AAATAACCACATAACAGTAG+AGG - chr7.3:1823643-1823662 MS.gene060386:CDS 30.0%
AACCCATTTATCAACCAATT+CGG + chr7.3:1823854-1823873 None:intergenic 30.0%
AAGATTCTAATTCTGCTACA+TGG - chr7.3:1823669-1823688 MS.gene060386:CDS 30.0%
AGAACTATAATGAGTATTCC+TGG + chr7.3:1822489-1822508 None:intergenic 30.0%
AGACTCTTAAACCAAGTAAA+AGG + chr7.3:1823929-1823948 None:intergenic 30.0%
ATCTGATTGAATTTGATTCC+AGG - chr7.3:1822468-1822487 MS.gene060386:intron 30.0%
ATTACTTCAAGGAACATATG+GGG - chr7.3:1822171-1822190 MS.gene060386:CDS 30.0%
ATTCTTGATCACTGCTTAAT+AGG - chr7.3:1822116-1822135 MS.gene060386:CDS 30.0%
ATTTGAATCATCTGGACATA+TGG - chr7.3:1822372-1822391 MS.gene060386:CDS 30.0%
CAATTACTTCAAGGAACATA+TGG - chr7.3:1822169-1822188 MS.gene060386:CDS 30.0%
CAGTTTAAGTATGAAAAGCT+TGG - chr7.3:1822599-1822618 MS.gene060386:intron 30.0%
GATTCGTTTCAATTACTTCA+AGG - chr7.3:1822160-1822179 MS.gene060386:CDS 30.0%
GTTTAAGTATGAAAAGCTTG+GGG - chr7.3:1822601-1822620 MS.gene060386:intron 30.0%
TGCTACACTTGAAAATTTAG+TGG - chr7.3:1824024-1824043 MS.gene060386:CDS 30.0%
TTTACTTGGTTTAAGAGTCT+TGG - chr7.3:1823929-1823948 MS.gene060386:CDS 30.0%
TTTGAATCATCTGGACATAT+GGG - chr7.3:1822373-1822392 MS.gene060386:CDS 30.0%
! GATTTCAATGACATTTTGGA+TGG - chr7.3:1823800-1823819 MS.gene060386:CDS 30.0%
! TGCTTTTCTGTTAATAGTGT+TGG - chr7.3:1823557-1823576 MS.gene060386:CDS 30.0%
!!! AAATTTTCAAGTGTAGCATC+CGG + chr7.3:1824022-1824041 None:intergenic 30.0%
AAGAATTTGAGTAGCATCAG+TGG + chr7.3:1822102-1822121 None:intergenic 35.0%
AAGCGTCAATTTGAATCATC+TGG - chr7.3:1822364-1822383 MS.gene060386:CDS 35.0%
AAGTAAGTCTTTGACAGATG+TGG - chr7.3:1822973-1822992 MS.gene060386:intron 35.0%
AATGGAATCGGTAAGTATCT+CGG - chr7.3:1822443-1822462 MS.gene060386:intron 35.0%
AGTCAATCCTTCATCTGTTA+AGG + chr7.3:1822063-1822082 None:intergenic 35.0%
CTATGATAACTACAACATGG+TGG - chr7.3:1822310-1822329 MS.gene060386:CDS 35.0%
CTTACAACACTCATTTACCT+CGG + chr7.3:1823386-1823405 None:intergenic 35.0%
GAAAAAAATCAGGTTCAGCT+TGG + chr7.3:1822232-1822251 None:intergenic 35.0%
GCTCTATGATAACTACAACA+TGG - chr7.3:1822307-1822326 MS.gene060386:CDS 35.0%
TCATCGGCAAAATAATTGTG+CGG - chr7.3:1824210-1824229 MS.gene060386:CDS 35.0%
TCCTCCATTTCAAACCTATT+CGG + chr7.3:1822674-1822693 None:intergenic 35.0%
TTGTAGTTATCATAGAGCCA+CGG + chr7.3:1822305-1822324 None:intergenic 35.0%
TTGTGTGCGTAACAATTACA+CGG - chr7.3:1824309-1824328 MS.gene060386:CDS 35.0%
! AGGGGATTTCAATGACATTT+TGG - chr7.3:1823796-1823815 MS.gene060386:CDS 35.0%
! CTTTTACCTCTACTGTTATG+TGG + chr7.3:1823652-1823671 None:intergenic 35.0%
! GGTAAATGAGTGTTGTAAGT+TGG - chr7.3:1823387-1823406 MS.gene060386:intron 35.0%
! GTACTGATGTTAGTAATGGA+GGG - chr7.3:1823278-1823297 MS.gene060386:CDS 35.0%
! TGGTTTATAGGATGTTTCTG+TGG - chr7.3:1823895-1823914 MS.gene060386:CDS 35.0%
! TGTTGTAGACTCTGGTTTAT+AGG - chr7.3:1823883-1823902 MS.gene060386:CDS 35.0%
! TTATAGGATGTTTCTGTGGA+GGG - chr7.3:1823899-1823918 MS.gene060386:CDS 35.0%
! TTTATAGGATGTTTCTGTGG+AGG - chr7.3:1823898-1823917 MS.gene060386:CDS 35.0%
!! GATATGGGAAAATTTGCTGT+AGG - chr7.3:1823256-1823275 MS.gene060386:CDS 35.0%
!! GTAGGTACTGATGTTAGTAA+TGG - chr7.3:1823274-1823293 MS.gene060386:CDS 35.0%
!! GTCCGAATTGGTTGATAAAT+GGG - chr7.3:1823849-1823868 MS.gene060386:CDS 35.0%
!! TGTCCGAATTGGTTGATAAA+TGG - chr7.3:1823848-1823867 MS.gene060386:CDS 35.0%
AAGACTACAGCGTGACAATT+CGG - chr7.3:1822793-1822812 MS.gene060386:intron 40.0%
AATAAGAGAATCCCCCGAAT+GGG + chr7.3:1824191-1824210 None:intergenic 40.0%
ACTTGAAAATTTAGTGGCCC+CGG - chr7.3:1824030-1824049 MS.gene060386:CDS 40.0%
AGTCCACGGCAATAAAATAG+AGG - chr7.3:1823505-1823524 MS.gene060386:CDS 40.0%
ATCCTGGTTCAACATGTATC+CGG - chr7.3:1824000-1824019 MS.gene060386:CDS 40.0%
ATCCTTCATCTGTTAAGGTG+AGG + chr7.3:1822058-1822077 None:intergenic 40.0%
ATTGGGTAGTGATCAAAAGC+CGG + chr7.3:1824052-1824071 None:intergenic 40.0%
CCTCCATTTCAAACCTATTC+GGG + chr7.3:1822673-1822692 None:intergenic 40.0%
CTTAAACTGCATTGTCGCAT+AGG + chr7.3:1822588-1822607 None:intergenic 40.0%
GAGGCTTTGCGTTATATTCT+TGG - chr7.3:1823524-1823543 MS.gene060386:CDS 40.0%
GATACATGTTGAACCAGGAT+TGG + chr7.3:1824000-1824019 None:intergenic 40.0%
GGATTTCTTGCGTCAGTTAT+CGG - chr7.3:1823745-1823764 MS.gene060386:CDS 40.0%
GTTTGAGAACGCTTGGAAAT+TGG - chr7.3:1824126-1824145 MS.gene060386:CDS 40.0%
TAACTCTTCTGTTACTGCTG+TGG - chr7.3:1823114-1823133 MS.gene060386:CDS 40.0%
TCACTTAGGAAGAGGAATTC+CGG + chr7.3:1823479-1823498 None:intergenic 40.0%
TCAGCATTAGCATCATACAG+AGG + chr7.3:1823327-1823346 None:intergenic 40.0%
TCTGCTACATGGTATCTTAC+CGG - chr7.3:1823680-1823699 MS.gene060386:CDS 40.0%
TGATAACTACAACATGGTGG+TGG - chr7.3:1822313-1822332 MS.gene060386:CDS 40.0%
TGATTCAAATTGACGCTTGC+TGG + chr7.3:1822362-1822381 None:intergenic 40.0%
TGTGTGCGTAACAATTACAC+GGG - chr7.3:1824310-1824329 MS.gene060386:CDS 40.0%
TGTTATCTGTGTGGTCTGTT+GGG - chr7.3:1822629-1822648 MS.gene060386:intron 40.0%
TTATACGCTTGCGCTTCTTA+AGG + chr7.3:1823171-1823190 None:intergenic 40.0%
TTCTGTACCAATTCCATCAC+CGG - chr7.3:1822249-1822268 MS.gene060386:CDS 40.0%
TTGGATGGTTGTGAAAAACG+AGG - chr7.3:1823815-1823834 MS.gene060386:CDS 40.0%
! AAAACTTCGCTGGTTGATTG+AGG + chr7.3:1824104-1824123 None:intergenic 40.0%
! AAACTTCGCTGGTTGATTGA+GGG + chr7.3:1824103-1824122 None:intergenic 40.0%
! AAGAAGCGCAAGCGTATAAA+GGG - chr7.3:1823172-1823191 MS.gene060386:CDS 40.0%
! AAGCCTCTATTTTATTGCCG+TGG + chr7.3:1823511-1823530 None:intergenic 40.0%
! ATCTGCCATTCTTGTTTCAG+AGG + chr7.3:1822548-1822567 None:intergenic 40.0%
! ATGTAGTGTCAAGTGTTGCT+GGG - chr7.3:1823233-1823252 MS.gene060386:CDS 40.0%
! CAATCAACCAGCGAAGTTTT+CGG - chr7.3:1824104-1824123 MS.gene060386:CDS 40.0%
! CTATGTCAGGTGTTTCTACA+GGG - chr7.3:1823086-1823105 MS.gene060386:intron 40.0%
! GAATAGGTTTGAAATGGAGG+AGG - chr7.3:1822673-1822692 MS.gene060386:intron 40.0%
! TAAGAAGCGCAAGCGTATAA+AGG - chr7.3:1823171-1823190 MS.gene060386:CDS 40.0%
! TATGTCAGGTGTTTCTACAG+GGG - chr7.3:1823087-1823106 MS.gene060386:intron 40.0%
! TGAAGGATTGACTCTCAATC+TGG - chr7.3:1822070-1822089 MS.gene060386:CDS 40.0%
! TGGAGGGATATCCTTTTACT+TGG - chr7.3:1823915-1823934 MS.gene060386:CDS 40.0%
! TGGTATCTTACCGGTTACTA+CGG - chr7.3:1823689-1823708 MS.gene060386:CDS 40.0%
!! CTGTACCTCTGAAACAAGAA+TGG - chr7.3:1822540-1822559 MS.gene060386:intron 40.0%
!! GGTACTGATGTTAGTAATGG+AGG - chr7.3:1823277-1823296 MS.gene060386:CDS 40.0%
!! GTGGTGGTCTTGCATTATTT+TGG - chr7.3:1823585-1823604 MS.gene060386:CDS 40.0%
!! GTTAATAGTGTTGGTCGTAG+TGG - chr7.3:1823566-1823585 MS.gene060386:CDS 40.0%
!!! CAGTTATCGGCTCAGATTTT+GGG - chr7.3:1823758-1823777 MS.gene060386:CDS 40.0%
!!! TCAGTTATCGGCTCAGATTT+TGG - chr7.3:1823757-1823776 MS.gene060386:CDS 40.0%
AACATATGGGGCACATTTGG+AGG - chr7.3:1822183-1822202 MS.gene060386:CDS 45.0%
AACCAGAGTCTACAACAGCT+TGG + chr7.3:1823880-1823899 None:intergenic 45.0%
AACGCTTGGAAATTGGAACC+GGG - chr7.3:1824133-1824152 MS.gene060386:CDS 45.0%
AATGATGTAACGGCAGGTCT+TGG - chr7.3:1823348-1823367 MS.gene060386:CDS 45.0%
AATGGCTGAAACCAGTGGTA+AGG - chr7.3:1822720-1822739 MS.gene060386:intron 45.0%
ACAACGATATACGTGGATGG+GGG - chr7.3:1822696-1822715 MS.gene060386:intron 45.0%
ACTGCTGACCTTAACCTTCA+AGG - chr7.3:1822032-1822051 MS.gene060386:CDS 45.0%
AGGAACATATGGGGCACATT+TGG - chr7.3:1822180-1822199 MS.gene060386:CDS 45.0%
AGGACAACGATATACGTGGA+TGG - chr7.3:1822693-1822712 MS.gene060386:intron 45.0%
ATAATTGTGCGGCAGACATG+TGG - chr7.3:1824221-1824240 MS.gene060386:CDS 45.0%
ATCCGGATACATGTTGAACC+AGG + chr7.3:1824005-1824024 None:intergenic 45.0%
CACTTAGGAAGAGGAATTCC+GGG + chr7.3:1823478-1823497 None:intergenic 45.0%
CATTTCAAACCTATTCGGGC+AGG + chr7.3:1822669-1822688 None:intergenic 45.0%
CGGGGGATTCTCTTATTCAT+CGG - chr7.3:1824194-1824213 MS.gene060386:CDS 45.0%
CTAACGTCTCACTTAGGAAG+AGG + chr7.3:1823487-1823506 None:intergenic 45.0%
CTAAGTGAGACGTTAGTCCA+CGG - chr7.3:1823491-1823510 MS.gene060386:CDS 45.0%
CTGCCCGAATAGGTTTGAAA+TGG - chr7.3:1822667-1822686 MS.gene060386:intron 45.0%
CTGCTGGAAACTTAGCTGTT+GGG - chr7.3:1822843-1822862 MS.gene060386:intron 45.0%
CTGTTATCTGTGTGGTCTGT+TGG - chr7.3:1822628-1822647 MS.gene060386:intron 45.0%
GAACGCTTGGAAATTGGAAC+CGG - chr7.3:1824132-1824151 MS.gene060386:CDS 45.0%
GAAGTAATCGCTGTCCGAAT+TGG - chr7.3:1823837-1823856 MS.gene060386:CDS 45.0%
GAATAAGAGAATCCCCCGAA+TGG + chr7.3:1824192-1824211 None:intergenic 45.0%
GACAACGATATACGTGGATG+GGG - chr7.3:1822695-1822714 MS.gene060386:intron 45.0%
GGACAACGATATACGTGGAT+GGG - chr7.3:1822694-1822713 MS.gene060386:intron 45.0%
GTAGAAACACCTGACATAGC+TGG + chr7.3:1823085-1823104 None:intergenic 45.0%
GTGTGCGTAACAATTACACG+GGG - chr7.3:1824311-1824330 MS.gene060386:CDS 45.0%
TCTCAAACCGAAAACTTCGC+TGG + chr7.3:1824114-1824133 None:intergenic 45.0%
TGGCAGATTCGAGTGAATGA+CGG - chr7.3:1822560-1822579 MS.gene060386:intron 45.0%
TGTCACGCTGTAGTCTTTGT+GGG + chr7.3:1822790-1822809 None:intergenic 45.0%
TGTGCGTAACAATTACACGG+GGG - chr7.3:1824312-1824331 MS.gene060386:CDS 45.0%
TGTTGGGCCATCAGAAAAGA+GGG - chr7.3:1822859-1822878 MS.gene060386:intron 45.0%
TTCACCATCTCATCAAACCC+CGG + chr7.3:1824154-1824173 None:intergenic 45.0%
TTGGGTAGTGATCAAAAGCC+GGG + chr7.3:1824051-1824070 None:intergenic 45.0%
TTGTCACGCTGTAGTCTTTG+TGG + chr7.3:1822791-1822810 None:intergenic 45.0%
! AAACCAGTGGTAAGGCGTTT+AGG - chr7.3:1822728-1822747 MS.gene060386:intron 45.0%
! AGTGGTAAGGCGTTTAGGTA+CGG - chr7.3:1822733-1822752 MS.gene060386:intron 45.0%
! ATGAGATGGTGAAGGAGTGT+TGG - chr7.3:1824161-1824180 MS.gene060386:CDS 45.0%
! ATGTCAGGTGTTTCTACAGG+GGG - chr7.3:1823088-1823107 MS.gene060386:intron 45.0%
! CCCGAATAGGTTTGAAATGG+AGG - chr7.3:1822670-1822689 MS.gene060386:intron 45.0%
! CGAGGTTGATTCAGACCAAA+TGG + chr7.3:1822416-1822435 None:intergenic 45.0%
! CTGATCTGAAGTACCTTGTC+CGG - chr7.3:1823444-1823463 MS.gene060386:intron 45.0%
! GATGTAGTGTCAAGTGTTGC+TGG - chr7.3:1823232-1823251 MS.gene060386:CDS 45.0%
! GCTATGTCAGGTGTTTCTAC+AGG - chr7.3:1823085-1823104 MS.gene060386:intron 45.0%
! GCTGATAATGATGTAACGGC+AGG - chr7.3:1823342-1823361 MS.gene060386:CDS 45.0%
! GGTATCTTACCGGTTACTAC+GGG - chr7.3:1823690-1823709 MS.gene060386:CDS 45.0%
! TCAAGTGTTGCTGGGGATAT+GGG - chr7.3:1823241-1823260 MS.gene060386:CDS 45.0%
! TGGGTCTGTGGTGCATTTTA+GGG - chr7.3:1823777-1823796 MS.gene060386:CDS 45.0%
! TGTAGTGTCAAGTGTTGCTG+GGG - chr7.3:1823234-1823253 MS.gene060386:CDS 45.0%
! TTGGGTCTGTGGTGCATTTT+AGG - chr7.3:1823776-1823795 MS.gene060386:CDS 45.0%
!! AATAGTGTTGGTCGTAGTGG+TGG - chr7.3:1823569-1823588 MS.gene060386:CDS 45.0%
!! AGAGTTTGGTTTGTTCCGCT+TGG + chr7.3:1823004-1823023 None:intergenic 45.0%
!! AGGATTGGTTAGCCAAAGCA+CGG + chr7.3:1823985-1824004 None:intergenic 45.0%
!! GACAATTCGGTGCAGGAAAT+GGG - chr7.3:1822806-1822825 MS.gene060386:intron 45.0%
!! GTTTTCGGTTTGAGAACGCT+TGG - chr7.3:1824119-1824138 MS.gene060386:CDS 45.0%
!! TGACAATTCGGTGCAGGAAA+TGG - chr7.3:1822805-1822824 MS.gene060386:intron 45.0%
AATCAACCTCGTGTGGGCAA+TGG - chr7.3:1822425-1822444 MS.gene060386:intron 50.0%
ACAGATGTGGCTTCACCAAG+CGG - chr7.3:1822986-1823005 MS.gene060386:intron 50.0%
ACGCTTGGAAATTGGAACCG+GGG - chr7.3:1824134-1824153 MS.gene060386:CDS 50.0%
AGCCAAGCTGTTGTAGACTC+TGG - chr7.3:1823875-1823894 MS.gene060386:CDS 50.0%
AGGTGAGGCCTTGAAGGTTA+AGG + chr7.3:1822043-1822062 None:intergenic 50.0%
AGTTGGAACTGCCGAGGTTT+AGG - chr7.3:1823404-1823423 MS.gene060386:intron 50.0%
ATATACGTGGATGGGGGGAA+TGG - chr7.3:1822702-1822721 MS.gene060386:intron 50.0%
ATCAGGTTCAGCTTGGGTGA+TGG + chr7.3:1822225-1822244 None:intergenic 50.0%
CAACACTCATTTACCTCGGC+AGG + chr7.3:1823382-1823401 None:intergenic 50.0%
CAACGATATACGTGGATGGG+GGG - chr7.3:1822697-1822716 MS.gene060386:intron 50.0%
CAGACATGTGGACTTGGAGT+CGG - chr7.3:1824233-1824252 MS.gene060386:CDS 50.0%
CAGGTGCATCAGCTACCATT+TGG - chr7.3:1822398-1822417 MS.gene060386:intron 50.0%
CGACAATGAGGATGTCACTG+TGG - chr7.3:1823138-1823157 MS.gene060386:CDS 50.0%
CGCTGTAGTCTTTGTGGGAT+AGG + chr7.3:1822785-1822804 None:intergenic 50.0%
CTGACGCAAGAAATCCCATG+CGG + chr7.3:1823741-1823760 None:intergenic 50.0%
CTGTTAAGGTGAGGCCTTGA+AGG + chr7.3:1822049-1822068 None:intergenic 50.0%
CTGTTGGGCCATCAGAAAAG+AGG - chr7.3:1822858-1822877 MS.gene060386:intron 50.0%
GAGGAGGACAACGATATACG+TGG - chr7.3:1822689-1822708 MS.gene060386:intron 50.0%
GCTGCTGGAAACTTAGCTGT+TGG - chr7.3:1822842-1822861 MS.gene060386:intron 50.0%
GGAATTCCGGGTTGTAACTC+CGG + chr7.3:1823466-1823485 None:intergenic 50.0%
GGCCTCACCTTAACAGATGA+AGG - chr7.3:1822053-1822072 MS.gene060386:CDS 50.0%
GGGGTTTGATGAGATGGTGA+AGG - chr7.3:1824153-1824172 MS.gene060386:CDS 50.0%
GGTCTGAATCAACCTCGTGT+GGG - chr7.3:1822419-1822438 MS.gene060386:intron 50.0%
GTACCTAAACGCCTTACCAC+TGG + chr7.3:1822734-1822753 None:intergenic 50.0%
GTACGGCTGCTACAAACATC+TGG - chr7.3:1822750-1822769 MS.gene060386:intron 50.0%
GTGATGGTAACACGTTTCCC+TGG + chr7.3:1822209-1822228 None:intergenic 50.0%
GTGCTTTGGCTAACCAATCC+TGG - chr7.3:1823984-1824003 MS.gene060386:CDS 50.0%
GTTACTACGGGTACCCTGAA+GGG - chr7.3:1823702-1823721 MS.gene060386:CDS 50.0%
TACTGCTGTGGACGACAATG+AGG - chr7.3:1823126-1823145 MS.gene060386:CDS 50.0%
TCAGATCAGGAACTACGCTC+AGG + chr7.3:1823433-1823452 None:intergenic 50.0%
TCATCTGGACATATGGGTGC+AGG - chr7.3:1822379-1822398 MS.gene060386:CDS 50.0%
TGAGTCTCCATAGTGAGTCG+CGG + chr7.3:1823034-1823053 None:intergenic 50.0%
TGCTACAAACATCTGGCTGC+AGG - chr7.3:1822757-1822776 MS.gene060386:intron 50.0%
TGGGTAGTGATCAAAAGCCG+GGG + chr7.3:1824050-1824069 None:intergenic 50.0%
TGGTCTGAATCAACCTCGTG+TGG - chr7.3:1822418-1822437 MS.gene060386:intron 50.0%
TTACTACGGGTACCCTGAAG+GGG - chr7.3:1823703-1823722 MS.gene060386:CDS 50.0%
! AGCGCAAGAACGAGTGGATT+AGG + chr7.3:1823061-1823080 None:intergenic 50.0%
! CGGACAAGGTACTTCAGATC+AGG + chr7.3:1823446-1823465 None:intergenic 50.0%
! CGTGGACTAACGTCTCACTT+AGG + chr7.3:1823493-1823512 None:intergenic 50.0%
! GGGGTGTTCTGTTATCTGTG+TGG - chr7.3:1822620-1822639 MS.gene060386:intron 50.0%
! GGGTCTGTGGTGCATTTTAG+GGG - chr7.3:1823778-1823797 MS.gene060386:CDS 50.0%
! GGTCAACATGTTTCTGCTGC+TGG - chr7.3:1822827-1822846 MS.gene060386:intron 50.0%
! GTCAAGTGTTGCTGGGGATA+TGG - chr7.3:1823240-1823259 MS.gene060386:CDS 50.0%
! GTTGTAAGTTGGAACTGCCG+AGG - chr7.3:1823398-1823417 MS.gene060386:intron 50.0%
! TTCAGGGTACCCGTAGTAAC+CGG + chr7.3:1823702-1823721 None:intergenic 50.0%
CCTCGTGTGGGCAATGGAAT+CGG - chr7.3:1822431-1822450 MS.gene060386:intron 55.0%
CCTTGTCCGGAGTTACAACC+CGG - chr7.3:1823457-1823476 MS.gene060386:intron 55.0%
CGCTCAGGCTACCTAAACCT+CGG + chr7.3:1823418-1823437 None:intergenic 55.0%
CTGACAAGACCTGCCCGAAT+AGG - chr7.3:1822657-1822676 MS.gene060386:intron 55.0%
CTTGCGCTACCAGCTATGTC+AGG - chr7.3:1823073-1823092 MS.gene060386:intron 55.0%
GCGTACGGTGCAGCATGATT+GGG + chr7.3:1824069-1824088 None:intergenic 55.0%
GGAACCGGGGTTTGATGAGA+TGG - chr7.3:1824147-1824166 MS.gene060386:CDS 55.0%
GGTTACTACGGGTACCCTGA+AGG - chr7.3:1823701-1823720 MS.gene060386:CDS 55.0%
TACTACGGGTACCCTGAAGG+GGG - chr7.3:1823704-1823723 MS.gene060386:CDS 55.0%
TGCGTACGGTGCAGCATGAT+TGG + chr7.3:1824070-1824089 None:intergenic 55.0%
! ACGCTTGCTGGAACAACTCC+AGG + chr7.3:1822350-1822369 None:intergenic 55.0%
! GTGGTGGAACGTATTGCTCC+TGG - chr7.3:1822329-1822348 MS.gene060386:CDS 55.0%
!! ACAGCGTGACAATTCGGTGC+AGG - chr7.3:1822799-1822818 MS.gene060386:intron 55.0%
!! AGTGTTGGCTCTCCCATTCG+GGG - chr7.3:1824176-1824195 MS.gene060386:CDS 55.0%
!! CGGCTCAGATTTTGGGTCTG+TGG - chr7.3:1823765-1823784 MS.gene060386:CDS 55.0%
!! CGTCAAGCCGGTGATGGAAT+TGG + chr7.3:1822259-1822278 None:intergenic 55.0%
!! GAGTGTTGGCTCTCCCATTC+GGG - chr7.3:1824175-1824194 MS.gene060386:CDS 55.0%
!! GGAGTGTTGGCTCTCCCATT+CGG - chr7.3:1824174-1824193 MS.gene060386:CDS 55.0%
AACGGCAGGTCTTGGAGTCC+AGG - chr7.3:1823356-1823375 MS.gene060386:CDS 60.0%
AGAGCGGCTAGACCGTGCTT+TGG - chr7.3:1823970-1823989 MS.gene060386:CDS 60.0%
AGGGACGCCTCACTTGCGTA+CGG + chr7.3:1824084-1824103 None:intergenic 60.0%
ATGGGGCACATTTGGAGGCC+AGG - chr7.3:1822188-1822207 MS.gene060386:CDS 60.0%
CACGTCTACGTCCCCCTTCA+GGG + chr7.3:1823718-1823737 None:intergenic 60.0%
CCGATTCCATTGCCCACACG+AGG + chr7.3:1822434-1822453 None:intergenic 60.0%
CCGGGTTGTAACTCCGGACA+AGG + chr7.3:1823460-1823479 None:intergenic 60.0%
CTCATTTACCTCGGCAGGCC+TGG + chr7.3:1823377-1823396 None:intergenic 60.0%
CTGCAAAGGTCCTGGAGGAG+GGG - chr7.3:1822279-1822298 MS.gene060386:CDS 60.0%
GAGTCTTGGTACACCCCGTG+CGG - chr7.3:1823943-1823962 MS.gene060386:CDS 60.0%
GCTGCAAAGGTCCTGGAGGA+GGG - chr7.3:1822278-1822297 MS.gene060386:CDS 60.0%
GCTTGACGCTGCAAAGGTCC+TGG - chr7.3:1822271-1822290 MS.gene060386:CDS 60.0%
GGACCTTTGCAGCGTCAAGC+CGG + chr7.3:1822271-1822290 None:intergenic 60.0%
GGGGGAATGGCTGAAACCAG+TGG - chr7.3:1822715-1822734 MS.gene060386:intron 60.0%
GTCGCGGCAGAGACAGAGTT+TGG + chr7.3:1823018-1823037 None:intergenic 60.0%
GTCTCTGCCGCGACTCACTA+TGG - chr7.3:1823024-1823043 MS.gene060386:intron 60.0%
GTGCGGCAGACATGTGGACT+TGG - chr7.3:1824227-1824246 MS.gene060386:CDS 60.0%
TGACGCTGCAAAGGTCCTGG+AGG - chr7.3:1822274-1822293 MS.gene060386:CDS 60.0%
TGCTGCACCGTACGCAAGTG+AGG - chr7.3:1824074-1824093 MS.gene060386:CDS 60.0%
TGGGGCACATTTGGAGGCCA+GGG - chr7.3:1822189-1822208 MS.gene060386:CDS 60.0%
TTGCAGCGTCAAGCCGGTGA+TGG + chr7.3:1822265-1822284 None:intergenic 60.0%
! GCCAGCGCCCTCTTTTCTGA+TGG + chr7.3:1822869-1822888 None:intergenic 60.0%
! GCCATCAGAAAAGAGGGCGC+TGG - chr7.3:1822865-1822884 MS.gene060386:intron 60.0%
! GCTGGTAGCGCAAGAACGAG+TGG + chr7.3:1823067-1823086 None:intergenic 60.0%
!! GTGTTGGCTCTCCCATTCGG+GGG - chr7.3:1824177-1824196 MS.gene060386:CDS 60.0%
!! TCACCGGCTTGACGCTGCAA+AGG - chr7.3:1822265-1822284 MS.gene060386:CDS 60.0%
!! TCAGAAAAGAGGGCGCTGGC+AGG - chr7.3:1822869-1822888 MS.gene060386:intron 60.0%
CGCTGCAAAGGTCCTGGAGG+AGG - chr7.3:1822277-1822296 MS.gene060386:CDS 65.0%
CTAGCCGCTCTTCGACCGCA+CGG + chr7.3:1823961-1823980 None:intergenic 65.0%
GCACGTCTACGTCCCCCTTC+AGG + chr7.3:1823719-1823738 None:intergenic 65.0%
GGGACGTAGACGTGCCGCAT+GGG - chr7.3:1823724-1823743 MS.gene060386:CDS 65.0%
TAGCCGCTCTTCGACCGCAC+GGG + chr7.3:1823960-1823979 None:intergenic 65.0%
AGCCGCTCTTCGACCGCACG+GGG + chr7.3:1823959-1823978 None:intergenic 70.0%
CACCCCGTGCGGTCGAAGAG+CGG - chr7.3:1823954-1823973 MS.gene060386:CDS 70.0%
CTTGGAGTCCAGGCCTGCCG+AGG - chr7.3:1823366-1823385 MS.gene060386:intron 70.0%
GGGGACGTAGACGTGCCGCA+TGG - chr7.3:1823723-1823742 MS.gene060386:CDS 70.0%
AGAGCCACGGCCCCTCCTCC+AGG + chr7.3:1822292-1822311 None:intergenic 75.0%
AGGTCCTGGAGGAGGGGCCG+TGG - chr7.3:1822285-1822304 MS.gene060386:CDS 75.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 1822026 1824345 1822026 ID=MS.gene060386
chr7.3 mRNA 1822026 1824345 1822026 ID=MS.gene060386.t1;Parent=MS.gene060386
chr7.3 exon 1823481 1824345 1823481 ID=MS.gene060386.t1.exon1;Parent=MS.gene060386.t1
chr7.3 CDS 1823481 1824345 1823481 ID=cds.MS.gene060386.t1;Parent=MS.gene060386.t1
chr7.3 exon 1823094 1823381 1823094 ID=MS.gene060386.t1.exon2;Parent=MS.gene060386.t1
chr7.3 CDS 1823094 1823381 1823094 ID=cds.MS.gene060386.t1;Parent=MS.gene060386.t1
chr7.3 exon 1822026 1822399 1822026 ID=MS.gene060386.t1.exon3;Parent=MS.gene060386.t1
chr7.3 CDS 1822026 1822399 1822026 ID=cds.MS.gene060386.t1;Parent=MS.gene060386.t1
Gene Sequence

>MS.gene060386

ATGTCTACTGCTGACCTTAACCTTCAAGGCCTCACCTTAACAGATGAAGGATTGACTCTCAATCTGGATTCTACCACTGATGCTACTCAAATTCTTGATCACTGCTTAATAGGTCGTGTGCTCACTGACAAATTGATTCGTTTCAATTACTTCAAGGAACATATGGGGCACATTTGGAGGCCAGGGAAACGTGTTACCATCACCCAAGCTGAACCTGATTTTTTTCTGTACCAATTCCATCACCGGCTTGACGCTGCAAAGGTCCTGGAGGAGGGGCCGTGGCTCTATGATAACTACAACATGGTGGTGGAACGTATTGCTCCTGGAGTTGTTCCAGCAAGCGTCAATTTGAATCATCTGGACATATGGGTGCAGGTGCATCAGCTACCATTTGGTCTGAATCAACCTCGTGTGGGCAATGGAATCGGTAAGTATCTCGGAGATCTGATTGAATTTGATTCCAGGAATACTCATTATAGTTCTTATATGCGGCTTAAAGTTCGAATTGATGTTACTGTACCTCTGAAACAAGAATGGCAGATTCGAGTGAATGACGGTTCCTATGCGACAATGCAGTTTAAGTATGAAAAGCTTGGGGTGTTCTGTTATCTGTGTGGTCTGTTGGGACATACTGACAAGACCTGCCCGAATAGGTTTGAAATGGAGGAGGACAACGATATACGTGGATGGGGGGAATGGCTGAAACCAGTGGTAAGGCGTTTAGGTACGGCTGCTACAAACATCTGGCTGCAGGATCCTATCCCACAAAGACTACAGCGTGACAATTCGGTGCAGGAAATGGGTCAACATGTTTCTGCTGCTGGAAACTTAGCTGTTGGGCCATCAGAAAAGAGGGCGCTGGCAGGTTGAATTACTGCTGTTCATAAAGAAATTGATTCTATAAAGTCTCATATTTTGGCTGCCCAACTTAATTCTCTATCAAAATCAAGTAAGTCTTTGACAGATGTGGCTTCACCAAGCGGAACAAACCAAACTCTGTCTCTGCCGCGACTCACTATGGAGACTCAACAGCCTAATCCACTCGTTCTTGCGCTACCAGCTATGTCAGGTGTTTCTACAGGGGGAGATAACTCTTCTGTTACTGCTGTGGACGACAATGAGGATGTCACTGTGGTTTCTGACCTTAAGAAGCGCAAGCGTATAAAGGGAGCTGAAGAGAAAAACGTCAAAGAAAGTCTTGTGTTTGATGTAGTGTCAAGTGTTGCTGGGGATATGGGAAAATTTGCTGTAGGTACTGATGTTAGTAATGGAGGGATGTTGTCATGACTGTTACTAATCCTCTGTATGATGCTAATGCTGATAATGATGTAACGGCAGGTCTTGGAGTCCAGGCCTGCCGAGGTAAATGAGTGTTGTAAGTTGGAACTGCCGAGGTTTAGGTAGCCTGAGCGTAGTTCCTGATCTGAAGTACCTTGTCCGGAGTTACAACCCGGAATTCCTCTTCCTAAGTGAGACGTTAGTCCACGGCAATAAAATAGAGGCTTTGCGTTATATTCTTGGTTATGATTTTTGCTTTTCTGTTAATAGTGTTGGTCGTAGTGGTGGTCTTGCATTATTTTGGCGTGTGTCTTTCAACTGTCATATCTTTAATCATTCAAATAACCACATAACAGTAGAGGTAAAAGATTCTAATTCTGCTACATGGTATCTTACCGGTTACTACGGGTACCCTGAAGGGGGACGTAGACGTGCCGCATGGGATTTCTTGCGTCAGTTATCGGCTCAGATTTTGGGTCTGTGGTGCATTTTAGGGGATTTCAATGACATTTTGGATGGTTGTGAAAAACGAGGAAGTAATCGCTGTCCGAATTGGTTGATAAATGGGTTCAGCCAAGCTGTTGTAGACTCTGGTTTATAGGATGTTTCTGTGGAGGGATATCCTTTTACTTGGTTTAAGAGTCTTGGTACACCCCGTGCGGTCGAAGAGCGGCTAGACCGTGCTTTGGCTAACCAATCCTGGTTCAACATGTATCCGGATGCTACACTTGAAAATTTAGTGGCCCCGGCTTTTGATCACTACCCAATCATGCTGCACCGTACGCAAGTGAGGCGTCCCTCAATCAACCAGCGAAGTTTTCGGTTTGAGAACGCTTGGAAATTGGAACCGGGGTTTGATGAGATGGTGAAGGAGTGTTGGCTCTCCCATTCGGGGGATTCTCTTATTCATCGGCAAAATAATTGTGCGGCAGACATGTGGACTTGGAGTCGGAATCATTATAACAAGCTGAAAATAGACATTGAAGATTGTCGTCGTCAATTAGATTGTGTGCGTAACAATTACACGGGGGAAGAACAATAA

Protein sequence

>MS.gene060386.t1

MSTADLNLQGLTLTDEGLTLNLDSTTDATQILDHCLIGRVLTDKLIRFNYFKEHMGHIWRPGKRVTITQAEPDFFLYQFHHRLDAAKVLEEGPWLYDNYNMVVERIAPGVVPASVNLNHLDIWVQVHQLPFGLNQPRVGNGIGKYLGDLIEFDSRNTHYSSYMRLKVRIDVTVPLKQEWQIRVNDGSYATMQFKYEKLGVFCYLCGLLGHTDKTCPNRFEMEEDNDIRGWGEWLKPVVRRLGTAATNIWLQDPIPQRLQRDNSVQEMGQHVSAAGNLAVGPSEKRALADVASPSGTNQTLSLPRLTMETQQPNPLVLALPAMSGVSTGGDNSSVTAVDDNEDVTVVSDLKKRKRIKGAEEKNVKESLVFDVVSSVAGDMGKFAVERLDRALANQSWFNMYPDATLENLVAPAFDHYPIMLHRTQVRRPSINQRSFRFENAWKLEPGFDEMVKECWLSHSGDSLIHRQNNCAADMWTWSRNHYNKLKIDIEDCRRQLDCVRNNYTGEEQ