Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005120.t1 | AES70414.1 | 51.5 | 340 | 99 | 3 | 49 | 388 | 1 | 274 | 1.30E-86 | 330.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005120.t1 | O04244 | 27.2 | 136 | 95 | 2 | 131 | 264 | 6 | 139 | 3.3e-09 | 64.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005120.t1 | G7J017 | 51.5 | 340 | 99 | 3 | 49 | 388 | 1 | 274 | 9.5e-87 | 330.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005120.t1 | MTR_3g053920 | 50.294 | 340 | 103 | 3 | 49 | 388 | 1 | 274 | 3.29e-105 | 315 |
MS.gene005120.t1 | MTR_2g061500 | 74.419 | 129 | 33 | 0 | 49 | 177 | 1 | 129 | 8.58e-68 | 214 |
MS.gene005120.t1 | MTR_7g011710 | 84.706 | 85 | 13 | 0 | 103 | 187 | 1 | 85 | 3.90e-46 | 158 |
MS.gene005120.t1 | MTR_4g103530 | 68.000 | 100 | 30 | 1 | 103 | 202 | 1 | 98 | 2.18e-42 | 149 |
MS.gene005120.t1 | MTR_6g033215 | 34.503 | 171 | 110 | 1 | 79 | 247 | 124 | 294 | 5.15e-33 | 127 |
MS.gene005120.t1 | MTR_8g463110 | 57.627 | 118 | 50 | 0 | 337 | 454 | 1 | 118 | 1.50e-29 | 122 |
MS.gene005120.t1 | MTR_0010s0370 | 32.386 | 176 | 117 | 1 | 52 | 225 | 2 | 177 | 1.20e-25 | 103 |
MS.gene005120.t1 | MTR_0010s0350 | 32.386 | 176 | 117 | 1 | 52 | 225 | 2 | 177 | 1.20e-25 | 103 |
MS.gene005120.t1 | MTR_1g036720 | 32.692 | 104 | 68 | 1 | 59 | 160 | 7 | 110 | 3.16e-13 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005120.t1 | AT2G17920 | 25.822 | 213 | 152 | 3 | 56 | 264 | 9 | 219 | 1.03e-17 | 84.3 |
MS.gene005120.t1 | AT5G36228 | 27.461 | 193 | 136 | 2 | 84 | 274 | 39 | 229 | 1.06e-16 | 82.0 |
MS.gene005120.t1 | AT3G57587 | 28.667 | 150 | 99 | 4 | 119 | 264 | 74 | 219 | 6.84e-16 | 79.7 |
MS.gene005120.t1 | AT2G41590 | 28.049 | 164 | 114 | 3 | 103 | 264 | 58 | 219 | 7.90e-16 | 79.3 |
MS.gene005120.t1 | AT3G31430 | 27.174 | 184 | 124 | 4 | 84 | 263 | 134 | 311 | 4.77e-14 | 73.6 |
MS.gene005120.t1 | AT2G02103 | 26.220 | 164 | 117 | 2 | 103 | 264 | 58 | 219 | 1.40e-13 | 72.8 |
MS.gene005120.t1 | AT2G13450 | 26.776 | 183 | 128 | 4 | 84 | 263 | 39 | 218 | 2.19e-13 | 72.0 |
MS.gene005120.t1 | AT3G47920 | 26.000 | 150 | 103 | 4 | 119 | 264 | 3 | 148 | 1.95e-12 | 68.6 |
Find 150 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGACTCAGTGGCGAGGTTT+AGG | 0.233947 | 1.1:-60018372 | None:intergenic |
ATCCTTAAGCCATTTGTTAT+TGG | 0.253429 | 1.1:-60019049 | None:intergenic |
CTGATGACGGAGTTCGTAAT+TGG | 0.256041 | 1.1:+60018983 | MS.gene005120:CDS |
AGCAGCAGGCATGGGAGCTT+GGG | 0.266517 | 1.1:-60019103 | None:intergenic |
TTTGGCTGATCGTGAGATTC+AGG | 0.308864 | 1.1:+60018435 | MS.gene005120:CDS |
TTTGGCTGATTACAACAAAA+AGG | 0.311916 | 1.1:-60018703 | None:intergenic |
CAGCAGCAGGCATGGGAGCT+TGG | 0.315778 | 1.1:-60019104 | None:intergenic |
AGACTCAGTGGCGAGGTTTA+GGG | 0.329947 | 1.1:-60018371 | None:intergenic |
AAACCGGTTGCTTCTCGTAT+TGG | 0.332821 | 1.1:+60019018 | MS.gene005120:CDS |
CCCTCAAGTCTCAATATTGC+TGG | 0.350835 | 1.1:+60018322 | MS.gene005120:CDS |
AGTGAGTCAAATCTTGTTCC+TGG | 0.364702 | 1.1:+60018235 | MS.gene005120:CDS |
CCAAATGTTGGTCAGGGTAT+AGG | 0.371467 | 1.1:+60018721 | MS.gene005120:CDS |
ACCTGAACCATATGGACATC+TGG | 0.375036 | 1.1:+60018662 | MS.gene005120:CDS |
CAAGCTCCCATGCCTGCTGC+TGG | 0.379709 | 1.1:+60019105 | MS.gene005120:CDS |
TCATTTGCTGCTGATGGGGA+TGG | 0.384310 | 1.1:+60019471 | MS.gene005120:CDS |
GACATCTGGGTTCAGGTTCA+TGG | 0.384445 | 1.1:+60018676 | MS.gene005120:CDS |
AATAGGTTCAAATGTTAGTC+AGG | 0.388463 | 1.1:+60019506 | MS.gene005120:CDS |
AGCCATACGCTCGCTGAAAT+AGG | 0.391985 | 1.1:-60018461 | None:intergenic |
CCCAGATGTCCATATGGTTC+AGG | 0.402215 | 1.1:-60018663 | None:intergenic |
CCTATACCCTGACCAACATT+TGG | 0.404583 | 1.1:-60018721 | None:intergenic |
CCATATGGACATCTGGGTTC+AGG | 0.407479 | 1.1:+60018669 | MS.gene005120:CDS |
TTGCCCGGACTTGTTCGAAT+TGG | 0.408985 | 1.1:+60018957 | MS.gene005120:CDS |
TAATCAGCCAAATGTTGGTC+AGG | 0.412014 | 1.1:+60018714 | MS.gene005120:CDS |
CTGTTTGGTAGGACGTGTTT+TGG | 0.412271 | 1.1:+60018417 | MS.gene005120:CDS |
CACCATCCTCGATCACTGTT+TGG | 0.415170 | 1.1:+60018402 | MS.gene005120:CDS |
ACAATAGAAACTCGCTTGCC+TGG | 0.418531 | 1.1:-60018496 | None:intergenic |
CATTTGCTGCTGATGGGGAT+GGG | 0.418666 | 1.1:+60019472 | MS.gene005120:CDS |
ATTTGCTGCTGATGGGGATG+GGG | 0.423209 | 1.1:+60019473 | MS.gene005120:CDS |
GAGGATGACCAGGATGTTAC+GGG | 0.426442 | 1.1:+60019393 | MS.gene005120:CDS |
ATGGCTCGTGCTTGGAAGCC+AGG | 0.426942 | 1.1:+60018478 | MS.gene005120:CDS |
AAGTGCTATGGATGGTATTA+CGG | 0.427130 | 1.1:-60018777 | None:intergenic |
GCAGGTAAACCGAGCACCAC+TGG | 0.435384 | 1.1:-60019345 | None:intergenic |
TGAAAGTTGCGGCCAGCAGC+AGG | 0.439396 | 1.1:-60019117 | None:intergenic |
TGCCAATAACAAATGGCTTA+AGG | 0.440251 | 1.1:+60019047 | MS.gene005120:CDS |
TTGCGGCCAGCAGCAGGCAT+GGG | 0.441899 | 1.1:-60019111 | None:intergenic |
TGATGACGGAGTTCGTAATT+GGG | 0.442501 | 1.1:+60018984 | MS.gene005120:CDS |
TGAGGATGACCAGGATGTTA+CGG | 0.444088 | 1.1:+60019392 | MS.gene005120:CDS |
CCTTGTTCCAACCGTTCCTA+TGG | 0.448786 | 1.1:+60018297 | MS.gene005120:CDS |
ATCTGTCGACCTGAACCATA+TGG | 0.449199 | 1.1:+60018654 | MS.gene005120:CDS |
ACTCACTGACTGTGTGCTTA+CGG | 0.451326 | 1.1:-60018219 | None:intergenic |
GCTTCCAATTCGAACAAGTC+CGG | 0.452234 | 1.1:-60018961 | None:intergenic |
GAAGCAACCGGTTTCAGATC+AGG | 0.453087 | 1.1:-60019009 | None:intergenic |
TACTCTTGGTCCGAGGTTAA+CGG | 0.456842 | 1.1:+60020429 | MS.gene005120:CDS |
CTGACTGTGTGCTTACGGCT+AGG | 0.464509 | 1.1:-60018214 | None:intergenic |
GCCAAAGTGAAGCATGTTGC+TGG | 0.465578 | 1.1:+60019243 | MS.gene005120:CDS |
CAGGGTATAGGTAGCTATCT+AGG | 0.468939 | 1.1:+60018733 | MS.gene005120:CDS |
TGACTGTGTGCTTACGGCTA+GGG | 0.472706 | 1.1:-60018213 | None:intergenic |
TCAGATTCCTCACTTGTAAA+CGG | 0.473482 | 1.1:-60019372 | None:intergenic |
GTTTCTATTGTCAAAACTGA+TGG | 0.474751 | 1.1:+60018508 | MS.gene005120:CDS |
CCTGAACCCAGATGTCCATA+TGG | 0.477535 | 1.1:-60018669 | None:intergenic |
GTTGCGGCCAGCAGCAGGCA+TGG | 0.478318 | 1.1:-60019112 | None:intergenic |
TTACATCATTTGCTGCTGAT+GGG | 0.483354 | 1.1:+60019466 | MS.gene005120:CDS |
CCGGGCAAACCTTGTCTGAA+TGG | 0.485324 | 1.1:-60018942 | None:intergenic |
CCAGCAATATTGAGACTTGA+GGG | 0.485345 | 1.1:-60018322 | None:intergenic |
TGTTACAGGTGCGGACTGCT+TGG | 0.488132 | 1.1:+60018919 | MS.gene005120:CDS |
TGCCTATTTCAGCGAGCGTA+TGG | 0.489265 | 1.1:+60018459 | MS.gene005120:CDS |
GCTGCCCGTGTTCTTGATGA+TGG | 0.490201 | 1.1:+60018568 | MS.gene005120:CDS |
CCATAGGAACGGTTGGAACA+AGG | 0.498971 | 1.1:-60018297 | None:intergenic |
CCATTCAGACAAGGTTTGCC+CGG | 0.499540 | 1.1:+60018942 | MS.gene005120:CDS |
GTCATGGACCGTATACAACC+TGG | 0.499758 | 1.1:+60018619 | MS.gene005120:CDS |
GTTCAGCTGCCAATAACAAA+TGG | 0.501013 | 1.1:+60019040 | MS.gene005120:CDS |
TGGTTCAGGTCGACAGATGT+AGG | 0.502239 | 1.1:-60018649 | None:intergenic |
GTGTATTCTTCGCATACTCT+TGG | 0.503224 | 1.1:+60020415 | MS.gene005120:CDS |
GCGAGCGTATGGCTCGTGCT+TGG | 0.503834 | 1.1:+60018470 | MS.gene005120:CDS |
ATTACATCATTTGCTGCTGA+TGG | 0.505133 | 1.1:+60019465 | MS.gene005120:CDS |
TGGAAAGTCCGTGTTAGTAC+TGG | 0.506120 | 1.1:+60018850 | MS.gene005120:CDS |
AGTGCATTCAGGAGATGGTC+AGG | 0.506180 | 1.1:+60020549 | MS.gene005120:intron |
ACCAGCAACATGCTTCACTT+TGG | 0.507514 | 1.1:-60019244 | None:intergenic |
AGGTAAAAGATGCACTTGAC+AGG | 0.509394 | 1.1:-60019277 | None:intergenic |
GTTTGTCTCGGCACAACAGA+TGG | 0.513246 | 1.1:-60019078 | None:intergenic |
GCTGGCCGCAACTTTCATCC+AGG | 0.513777 | 1.1:+60019123 | MS.gene005120:CDS |
GAAAATTATCATACAGCCAT+GGG | 0.515399 | 1.1:-60018591 | None:intergenic |
TTGGGGACCTGATCTGAAAC+CGG | 0.517910 | 1.1:+60019002 | MS.gene005120:CDS |
GGACAACCCCAGGTTGTATA+CGG | 0.519072 | 1.1:-60018627 | None:intergenic |
ACAGGTTGCCCAGTGGTGCT+CGG | 0.520634 | 1.1:+60019336 | MS.gene005120:CDS |
GTGAGTCAAATCTTGTTCCT+GGG | 0.521605 | 1.1:+60018236 | MS.gene005120:CDS |
TTTCTATTGTCAAAACTGAT+GGG | 0.525861 | 1.1:+60018509 | MS.gene005120:CDS |
TCACTTGTAAACGGAGCAGC+AGG | 0.527702 | 1.1:-60019363 | None:intergenic |
AAATTTAAGTATGAGAAACT+TGG | 0.529182 | 1.1:+60018889 | MS.gene005120:CDS |
TGGTTTAACCATTGCTGAAG+AGG | 0.530085 | 1.1:+60018342 | MS.gene005120:CDS |
CTTCCAATTCGAACAAGTCC+GGG | 0.531082 | 1.1:-60018960 | None:intergenic |
TCAGCTTCCACACTCATCAC+AGG | 0.531993 | 1.1:+60019318 | MS.gene005120:CDS |
ATGTAATTGCACCATTCTGA+AGG | 0.538475 | 1.1:-60019449 | None:intergenic |
GGAGCTTGGGGAGTTTGTCT+CGG | 0.539891 | 1.1:-60019090 | None:intergenic |
GTTGGAACAAGGGGACAGAT+AGG | 0.540379 | 1.1:-60018286 | None:intergenic |
TGAAAATTATCATACAGCCA+TGG | 0.541083 | 1.1:-60018592 | None:intergenic |
TTTGCTGCTGATGGGGATGG+GGG | 0.546802 | 1.1:+60019474 | MS.gene005120:CDS |
TGAGGAATCTGAGGATGACC+AGG | 0.548864 | 1.1:+60019383 | MS.gene005120:CDS |
GGTTTAACCATTGCTGAAGA+GGG | 0.548896 | 1.1:+60018343 | MS.gene005120:CDS |
GAACCAATACGAGAAGCAAC+CGG | 0.551481 | 1.1:-60019021 | None:intergenic |
GCAGCAGGCATGGGAGCTTG+GGG | 0.551902 | 1.1:-60019102 | None:intergenic |
TGTTGTAATCAGCCAAATGT+TGG | 0.554828 | 1.1:+60018709 | MS.gene005120:CDS |
GTTCTGAACCCGTAACATCC+TGG | 0.558247 | 1.1:-60019401 | None:intergenic |
GGTTAAACCCTCTTCAGCAA+TGG | 0.558439 | 1.1:-60018350 | None:intergenic |
ACCAGCAATATTGAGACTTG+AGG | 0.558584 | 1.1:-60018323 | None:intergenic |
CAGAACTTAAGAAGCGAAAG+AGG | 0.563185 | 1.1:+60019418 | MS.gene005120:CDS |
TTGAGACTTGAGGGATCCAT+AGG | 0.568944 | 1.1:-60018313 | None:intergenic |
TCAATCGCATATAAGTGCTA+TGG | 0.572634 | 1.1:-60018789 | None:intergenic |
GGTTCAGGTCGACAGATGTA+GGG | 0.573327 | 1.1:-60018648 | None:intergenic |
GAGGGATCCATAGGAACGGT+TGG | 0.575377 | 1.1:-60018304 | None:intergenic |
TTCGAATTGGAAGCTGATGA+CGG | 0.577920 | 1.1:+60018970 | MS.gene005120:CDS |
ATCCTCGATCACTGTTTGGT+AGG | 0.585067 | 1.1:+60018406 | MS.gene005120:CDS |
CAGGTAAACCGAGCACCACT+GGG | 0.586382 | 1.1:-60019344 | None:intergenic |
ATAGGTTCAAATGTTAGTCA+GGG | 0.586644 | 1.1:+60019507 | MS.gene005120:CDS |
TCATGGACCGTATACAACCT+GGG | 0.587245 | 1.1:+60018620 | MS.gene005120:CDS |
ACCGCACTAGCAGCACCACC+TGG | 0.589399 | 1.1:-60019141 | None:intergenic |
CATAGGAACGGTTGGAACAA+GGG | 0.594621 | 1.1:-60018296 | None:intergenic |
TGCTGCTCCGTTTACAAGTG+AGG | 0.594642 | 1.1:+60019365 | MS.gene005120:CDS |
TACATCATTTGCTGCTGATG+GGG | 0.595588 | 1.1:+60019467 | MS.gene005120:CDS |
TTTGTCTCGGCACAACAGAT+GGG | 0.598784 | 1.1:-60019077 | None:intergenic |
CCTGAACCATATGGACATCT+GGG | 0.599548 | 1.1:+60018663 | MS.gene005120:CDS |
GAAAGTCCTGCAGAAGCAGA+AGG | 0.599759 | 1.1:-60019297 | None:intergenic |
TCAGCGCACGCCGTTAACCT+CGG | 0.599825 | 1.1:-60020439 | None:intergenic |
TTCTATTGTCAAAACTGATG+GGG | 0.600760 | 1.1:+60018510 | MS.gene005120:CDS |
ATAGGAACGGTTGGAACAAG+GGG | 0.602591 | 1.1:-60018295 | None:intergenic |
CTTCGCATACTCTTGGTCCG+AGG | 0.604258 | 1.1:+60020422 | MS.gene005120:CDS |
GTGTTCTTGATGATGGCCCA+TGG | 0.605740 | 1.1:+60018575 | MS.gene005120:CDS |
TTTGTATGTGGGAAAGCATG+GGG | 0.607368 | 1.1:-60018189 | None:intergenic |
GTTCAAATGTTAGTCAGGGG+GGG | 0.608482 | 1.1:+60019511 | MS.gene005120:CDS |
TACCAAACAGTGATCGAGGA+TGG | 0.611265 | 1.1:-60018404 | None:intergenic |
AGGATGATGACCCTTCAGAA+TGG | 0.611730 | 1.1:+60019438 | MS.gene005120:CDS |
TCCAGGTGGTGCTGCTAGTG+CGG | 0.614412 | 1.1:+60019140 | MS.gene005120:CDS |
CGTAATCACCAGTACTAACA+CGG | 0.615539 | 1.1:-60018858 | None:intergenic |
ACTGCTTGGCCATTCAGACA+AGG | 0.615646 | 1.1:+60018933 | MS.gene005120:CDS |
CACCACCTGGATGAAAGTTG+CGG | 0.616021 | 1.1:-60019128 | None:intergenic |
ACAGATGTAGGGACAACCCC+AGG | 0.618679 | 1.1:-60018637 | None:intergenic |
GGCCGCAACTTTCATCCAGG+TGG | 0.619748 | 1.1:+60019126 | MS.gene005120:CDS |
ATGGGCCATCATCAAGAACA+CGG | 0.622255 | 1.1:-60018573 | None:intergenic |
CAACATGCTTCACTTTGGCG+AGG | 0.622470 | 1.1:-60019239 | None:intergenic |
AAAGATGCACTTGACAGGTA+CGG | 0.627868 | 1.1:-60019272 | None:intergenic |
TCGCATATAAGTGCTATGGA+TGG | 0.634744 | 1.1:-60018785 | None:intergenic |
CTCGGCACAACAGATGGGAT+AGG | 0.642910 | 1.1:-60019072 | None:intergenic |
GAGGTTAACGGCGTGCGCTG+AGG | 0.645411 | 1.1:+60020441 | MS.gene005120:CDS |
AATCAGCCAAATGTTGGTCA+GGG | 0.647271 | 1.1:+60018715 | MS.gene005120:CDS |
TAGGTTCAAATGTTAGTCAG+GGG | 0.648436 | 1.1:+60019508 | MS.gene005120:CDS |
GATGACGGAGTTCGTAATTG+GGG | 0.648553 | 1.1:+60018985 | MS.gene005120:CDS |
GTTTACAAGTGAGGAATCTG+AGG | 0.651895 | 1.1:+60019374 | MS.gene005120:CDS |
GGTTCAAATGTTAGTCAGGG+GGG | 0.657576 | 1.1:+60019510 | MS.gene005120:CDS |
TGGGCCATCATCAAGAACAC+GGG | 0.657924 | 1.1:-60018572 | None:intergenic |
TGTAATTGCACCATTCTGAA+GGG | 0.659743 | 1.1:-60019448 | None:intergenic |
AGGTTCAAATGTTAGTCAGG+GGG | 0.661132 | 1.1:+60019509 | MS.gene005120:CDS |
GGTGTTAGTTTCAGACTCAG+TGG | 0.662728 | 1.1:-60018383 | None:intergenic |
GTCCTACCAAACAGTGATCG+AGG | 0.664033 | 1.1:-60018408 | None:intergenic |
CATGGACCGTATACAACCTG+GGG | 0.669644 | 1.1:+60018621 | MS.gene005120:CDS |
TAGTTTCAGACTCAGTGGCG+AGG | 0.677757 | 1.1:-60018378 | None:intergenic |
GAAACAAAATTGAAACACCC+AGG | 0.686745 | 1.1:-60018253 | None:intergenic |
ACTTGAGGGATCCATAGGAA+CGG | 0.687296 | 1.1:-60018308 | None:intergenic |
TGGGCAACCTGTGATGAGTG+TGG | 0.688147 | 1.1:-60019325 | None:intergenic |
GGGACAGATAGGAAAACGAG+TGG | 0.690351 | 1.1:-60018275 | None:intergenic |
ACTCATCACAGGTTGCCCAG+TGG | 0.753003 | 1.1:+60019329 | MS.gene005120:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTTAAGTATGAGAAACT+TGG | + | chr1.1:60018889-60018908 | MS.gene005120:CDS | 20.0% |
!! | TAATAAAATAGGATAGTGAT+CGG | - | chr1.1:60020287-60020306 | None:intergenic | 20.0% |
!!! | TGATAATTTTCATATTGTCA+TGG | + | chr1.1:60018603-60018622 | MS.gene005120:CDS | 20.0% |
! | TCACTTAGGAATAAAATATC+CGG | - | chr1.1:60019707-60019726 | None:intergenic | 25.0% |
! | TTTCTATTGTCAAAACTGAT+GGG | + | chr1.1:60018509-60018528 | MS.gene005120:CDS | 25.0% |
!! | GGAGTTCTTCAATTTTATTA+CGG | - | chr1.1:60019742-60019761 | None:intergenic | 25.0% |
!!! | AACTTGGTATTTTTTGTTAC+AGG | + | chr1.1:60018905-60018924 | MS.gene005120:CDS | 25.0% |
AATAGGTTCAAATGTTAGTC+AGG | + | chr1.1:60019506-60019525 | MS.gene005120:CDS | 30.0% | |
AATAGTTTCAACAATGGCAT+TGG | - | chr1.1:60020251-60020270 | None:intergenic | 30.0% | |
AATCGTAACCAAGCAAAAAA+CGG | - | chr1.1:60019763-60019782 | None:intergenic | 30.0% | |
AGCAACAATAGTTTCAACAA+TGG | - | chr1.1:60020257-60020276 | None:intergenic | 30.0% | |
ATAGGTTCAAATGTTAGTCA+GGG | + | chr1.1:60019507-60019526 | MS.gene005120:CDS | 30.0% | |
ATAGTTTCAACAATGGCATT+GGG | - | chr1.1:60020250-60020269 | None:intergenic | 30.0% | |
CCACAATCTCAATAGAAATA+TGG | - | chr1.1:60019880-60019899 | None:intergenic | 30.0% | |
GAAAATTATCATACAGCCAT+GGG | - | chr1.1:60018594-60018613 | None:intergenic | 30.0% | |
GTTTCTATTGTCAAAACTGA+TGG | + | chr1.1:60018508-60018527 | MS.gene005120:CDS | 30.0% | |
TAAATTGATGTGAGAGTTGA+CGG | - | chr1.1:60019985-60020004 | None:intergenic | 30.0% | |
TGAAAATTATCATACAGCCA+TGG | - | chr1.1:60018595-60018614 | None:intergenic | 30.0% | |
TTCTATTGTCAAAACTGATG+GGG | + | chr1.1:60018510-60018529 | MS.gene005120:CDS | 30.0% | |
TTTGGCTGATTACAACAAAA+AGG | - | chr1.1:60018706-60018725 | None:intergenic | 30.0% | |
! | CCATATTTCTATTGAGATTG+TGG | + | chr1.1:60019877-60019896 | MS.gene005120:intron | 30.0% |
! | TACGGTCATCATAGATTTTA+AGG | - | chr1.1:60018762-60018781 | None:intergenic | 30.0% |
! | TTTTCAGTTCCACCATAAAA+TGG | + | chr1.1:60018543-60018562 | MS.gene005120:CDS | 30.0% |
!! | ATCCTTAAGCCATTTGTTAT+TGG | - | chr1.1:60019052-60019071 | None:intergenic | 30.0% |
!! | TATTAATGGCTTTAGACAAG+CGG | + | chr1.1:60020090-60020109 | MS.gene005120:intron | 30.0% |
!! | TTTTATGGTGGAACTGAAAA+AGG | - | chr1.1:60018543-60018562 | None:intergenic | 30.0% |
AAATCACCAAATATGCACCA+TGG | - | chr1.1:60020013-60020032 | None:intergenic | 35.0% | |
AAGAGTTATTACCAAGAGCA+CGG | - | chr1.1:60020213-60020232 | None:intergenic | 35.0% | |
AAGTGCTATGGATGGTATTA+CGG | - | chr1.1:60018780-60018799 | None:intergenic | 35.0% | |
AATCACCAAATATGCACCAT+GGG | - | chr1.1:60020012-60020031 | None:intergenic | 35.0% | |
ACATCAGTGTCATCATACAA+TGG | - | chr1.1:60019564-60019583 | None:intergenic | 35.0% | |
ATCTAGTAGCATGGAATTGT+CGG | + | chr1.1:60019624-60019643 | MS.gene005120:intron | 35.0% | |
ATGTAATTGCACCATTCTGA+AGG | - | chr1.1:60019452-60019471 | None:intergenic | 35.0% | |
CAACTCTCACATCAATTTAC+AGG | + | chr1.1:60019986-60020005 | MS.gene005120:intron | 35.0% | |
GAAACAAAATTGAAACACCC+AGG | - | chr1.1:60018256-60018275 | None:intergenic | 35.0% | |
GCATGTGATGAAGTTGTTTA+CGG | - | chr1.1:60020525-60020544 | None:intergenic | 35.0% | |
GCTACTAGATTCATTTACCT+AGG | - | chr1.1:60019614-60019633 | None:intergenic | 35.0% | |
GGTAAATGAATCTAGTAGCA+TGG | + | chr1.1:60019615-60019634 | MS.gene005120:intron | 35.0% | |
GTAAACAACTTCATCACATG+CGG | + | chr1.1:60020524-60020543 | MS.gene005120:intron | 35.0% | |
GTATGATGACACTGATGTAA+TGG | + | chr1.1:60019566-60019585 | MS.gene005120:intron | 35.0% | |
TAGGTTCAAATGTTAGTCAG+GGG | + | chr1.1:60019508-60019527 | MS.gene005120:CDS | 35.0% | |
TAGTTTCAACAATGGCATTG+GGG | - | chr1.1:60020249-60020268 | None:intergenic | 35.0% | |
TCAATCGCATATAAGTGCTA+TGG | - | chr1.1:60018792-60018811 | None:intergenic | 35.0% | |
TCAGATTCCTCACTTGTAAA+CGG | - | chr1.1:60019375-60019394 | None:intergenic | 35.0% | |
TGCCAATAACAAATGGCTTA+AGG | + | chr1.1:60019047-60019066 | MS.gene005120:CDS | 35.0% | |
TGTAATTGCACCATTCTGAA+GGG | - | chr1.1:60019451-60019470 | None:intergenic | 35.0% | |
TGTTGTAATCAGCCAAATGT+TGG | + | chr1.1:60018709-60018728 | MS.gene005120:CDS | 35.0% | |
TTAAGATCAGGAATTGCACT+CGG | - | chr1.1:60019662-60019681 | None:intergenic | 35.0% | |
TTACGAAAATGCATGGCATT+TGG | + | chr1.1:60020354-60020373 | MS.gene005120:intron | 35.0% | |
! | AATGCCATGCATTTTCGTAA+CGG | - | chr1.1:60020354-60020373 | None:intergenic | 35.0% |
! | ATTACATCATTTGCTGCTGA+TGG | + | chr1.1:60019465-60019484 | MS.gene005120:CDS | 35.0% |
! | TTACATCATTTGCTGCTGAT+GGG | + | chr1.1:60019466-60019485 | MS.gene005120:CDS | 35.0% |
!! | GGGGAGCATTGTAATAAAAT+AGG | - | chr1.1:60020298-60020317 | None:intergenic | 35.0% |
!! | TTTTGTATGTGGGAAAGCAT+GGG | - | chr1.1:60018193-60018212 | None:intergenic | 35.0% |
!!! | ACTTTCCACTCTTTTTTCAG+TGG | - | chr1.1:60018838-60018857 | None:intergenic | 35.0% |
!!! | CTTTCCACTCTTTTTTCAGT+GGG | - | chr1.1:60018837-60018856 | None:intergenic | 35.0% |
!!! | GGTATTTTTTGTTACAGGTG+CGG | + | chr1.1:60018910-60018929 | MS.gene005120:CDS | 35.0% |
AAAGATGCACTTGACAGGTA+CGG | - | chr1.1:60019275-60019294 | None:intergenic | 40.0% | |
AAATATCCGGATTGAAGTGC+CGG | - | chr1.1:60019694-60019713 | None:intergenic | 40.0% | |
AAGCCATTAATAAGCCACTG+AGG | - | chr1.1:60020082-60020101 | None:intergenic | 40.0% | |
AAGTTACGTTTGTGGGATTG+AGG | - | chr1.1:60020331-60020350 | None:intergenic | 40.0% | |
AATCAGCCAAATGTTGGTCA+GGG | + | chr1.1:60018715-60018734 | MS.gene005120:CDS | 40.0% | |
ACCAGCAATATTGAGACTTG+AGG | - | chr1.1:60018326-60018345 | None:intergenic | 40.0% | |
ACTTCCGTTACGAAAATGCA+TGG | + | chr1.1:60020347-60020366 | MS.gene005120:intron | 40.0% | |
AGACCTCAGTGGCTTATTAA+TGG | + | chr1.1:60020076-60020095 | MS.gene005120:intron | 40.0% | |
AGACTCTTGAACCACGAAAA+AGG | - | chr1.1:60020157-60020176 | None:intergenic | 40.0% | |
AGGACCTTGTTACTAACTCT+TGG | + | chr1.1:60020389-60020408 | MS.gene005120:intron | 40.0% | |
AGGTAAAAGATGCACTTGAC+AGG | - | chr1.1:60019280-60019299 | None:intergenic | 40.0% | |
AGGTTCAAATGTTAGTCAGG+GGG | + | chr1.1:60019509-60019528 | MS.gene005120:CDS | 40.0% | |
AGTGAGTCAAATCTTGTTCC+TGG | + | chr1.1:60018235-60018254 | MS.gene005120:CDS | 40.0% | |
CAGAACTTAAGAAGCGAAAG+AGG | + | chr1.1:60019418-60019437 | MS.gene005120:CDS | 40.0% | |
CCAGCAATATTGAGACTTGA+GGG | - | chr1.1:60018325-60018344 | None:intergenic | 40.0% | |
CGTAATCACCAGTACTAACA+CGG | - | chr1.1:60018861-60018880 | None:intergenic | 40.0% | |
CTAGATTCATTTACCTAGGC+AGG | - | chr1.1:60019610-60019629 | None:intergenic | 40.0% | |
CTGATCTTAAGTACCTAGTC+CGG | + | chr1.1:60019672-60019691 | MS.gene005120:intron | 40.0% | |
GAGATTGTGGATTCTGTTCA+TGG | + | chr1.1:60019890-60019909 | MS.gene005120:intron | 40.0% | |
GGTGGAACTGAAAAAGGAAA+CGG | - | chr1.1:60018537-60018556 | None:intergenic | 40.0% | |
GGTTTAACCATTGCTGAAGA+GGG | + | chr1.1:60018343-60018362 | MS.gene005120:CDS | 40.0% | |
GTGAGTCAAATCTTGTTCCT+GGG | + | chr1.1:60018236-60018255 | MS.gene005120:CDS | 40.0% | |
GTGTATTCTTCGCATACTCT+TGG | + | chr1.1:60020415-60020434 | MS.gene005120:CDS | 40.0% | |
GTTCAGCTGCCAATAACAAA+TGG | + | chr1.1:60019040-60019059 | MS.gene005120:CDS | 40.0% | |
GTTTACAAGTGAGGAATCTG+AGG | + | chr1.1:60019374-60019393 | MS.gene005120:CDS | 40.0% | |
TAAGATCAGGAATTGCACTC+GGG | - | chr1.1:60019661-60019680 | None:intergenic | 40.0% | |
TAATCAGCCAAATGTTGGTC+AGG | + | chr1.1:60018714-60018733 | MS.gene005120:CDS | 40.0% | |
TCGCATATAAGTGCTATGGA+TGG | - | chr1.1:60018788-60018807 | None:intergenic | 40.0% | |
TCTAGTAGCATGGAATTGTC+GGG | + | chr1.1:60019625-60019644 | MS.gene005120:intron | 40.0% | |
TGGTTTAACCATTGCTGAAG+AGG | + | chr1.1:60018342-60018361 | MS.gene005120:CDS | 40.0% | |
TTAATAAGCCACTGAGGTCT+AGG | - | chr1.1:60020076-60020095 | None:intergenic | 40.0% | |
TTCGAATTGGAAGCTGATGA+CGG | + | chr1.1:60018970-60018989 | MS.gene005120:CDS | 40.0% | |
! | AAATGCATGGCATTTGGAAC+CGG | + | chr1.1:60020360-60020379 | MS.gene005120:intron | 40.0% |
! | GATGGGGGAACTTTTGTAAT+AGG | + | chr1.1:60019489-60019508 | MS.gene005120:CDS | 40.0% |
! | GTAACGGAAGTTACGTTTGT+GGG | - | chr1.1:60020338-60020357 | None:intergenic | 40.0% |
! | GTGCTCTTGGTAATAACTCT+TGG | + | chr1.1:60020212-60020231 | MS.gene005120:intron | 40.0% |
! | GTTTTGTATGTGGGAAAGCA+TGG | - | chr1.1:60018194-60018213 | None:intergenic | 40.0% |
! | TACATCATTTGCTGCTGATG+GGG | + | chr1.1:60019467-60019486 | MS.gene005120:CDS | 40.0% |
! | TTTGTATGTGGGAAAGCATG+GGG | - | chr1.1:60018192-60018211 | None:intergenic | 40.0% |
! | TTTTCGTGGTTCAAGAGTCT+TGG | + | chr1.1:60020157-60020176 | MS.gene005120:intron | 40.0% |
!! | TGATGACGGAGTTCGTAATT+GGG | + | chr1.1:60018984-60019003 | MS.gene005120:CDS | 40.0% |
!!! | GAAGAACTCCGTTTTTTGCT+TGG | + | chr1.1:60019752-60019771 | MS.gene005120:intron | 40.0% |
AAACCGGTTGCTTCTCGTAT+TGG | + | chr1.1:60019018-60019037 | MS.gene005120:CDS | 45.0% | |
ACAATAGAAACTCGCTTGCC+TGG | - | chr1.1:60018499-60018518 | None:intergenic | 45.0% | |
ACCAGCAACATGCTTCACTT+TGG | - | chr1.1:60019247-60019266 | None:intergenic | 45.0% | |
ACCTGAACCATATGGACATC+TGG | + | chr1.1:60018662-60018681 | MS.gene005120:CDS | 45.0% | |
ACTTGAGGGATCCATAGGAA+CGG | - | chr1.1:60018311-60018330 | None:intergenic | 45.0% | |
AGGATGATGACCCTTCAGAA+TGG | + | chr1.1:60019438-60019457 | MS.gene005120:CDS | 45.0% | |
ATAGGAACGGTTGGAACAAG+GGG | - | chr1.1:60018298-60018317 | None:intergenic | 45.0% | |
ATAGGATAGTGATCGGATGC+AGG | - | chr1.1:60020280-60020299 | None:intergenic | 45.0% | |
ATCCTCGATCACTGTTTGGT+AGG | + | chr1.1:60018406-60018425 | MS.gene005120:CDS | 45.0% | |
ATCTGTCGACCTGAACCATA+TGG | + | chr1.1:60018654-60018673 | MS.gene005120:CDS | 45.0% | |
ATGGGCCATCATCAAGAACA+CGG | - | chr1.1:60018576-60018595 | None:intergenic | 45.0% | |
CACATCAATTTACAGGCCCA+TGG | + | chr1.1:60019993-60020012 | MS.gene005120:intron | 45.0% | |
CAGGGTATAGGTAGCTATCT+AGG | + | chr1.1:60018733-60018752 | MS.gene005120:CDS | 45.0% | |
CATAGGAACGGTTGGAACAA+GGG | - | chr1.1:60018299-60018318 | None:intergenic | 45.0% | |
CCAAATGTTGGTCAGGGTAT+AGG | + | chr1.1:60018721-60018740 | MS.gene005120:CDS | 45.0% | |
CCCTCAAGTCTCAATATTGC+TGG | + | chr1.1:60018322-60018341 | MS.gene005120:CDS | 45.0% | |
CCTATACCCTGACCAACATT+TGG | - | chr1.1:60018724-60018743 | None:intergenic | 45.0% | |
CCTGAACCATATGGACATCT+GGG | + | chr1.1:60018663-60018682 | MS.gene005120:CDS | 45.0% | |
CCTGCCAAGAGTTAGTAACA+AGG | - | chr1.1:60020396-60020415 | None:intergenic | 45.0% | |
CCTTGTTACTAACTCTTGGC+AGG | + | chr1.1:60020393-60020412 | MS.gene005120:intron | 45.0% | |
CTAGTAGCATGGAATTGTCG+GGG | + | chr1.1:60019626-60019645 | MS.gene005120:intron | 45.0% | |
CTCTCTTCTCACTAGCATCA+AGG | - | chr1.1:60020045-60020064 | None:intergenic | 45.0% | |
CTGAGGATATGTCAGTATGG+CGG | + | chr1.1:60020458-60020477 | MS.gene005120:intron | 45.0% | |
CTGTCCCACTGAAAAAAGAG+TGG | + | chr1.1:60018830-60018849 | MS.gene005120:CDS | 45.0% | |
CTTCCAATTCGAACAAGTCC+GGG | - | chr1.1:60018963-60018982 | None:intergenic | 45.0% | |
CTTGATGCTAGTGAGAAGAG+AGG | + | chr1.1:60020043-60020062 | MS.gene005120:intron | 45.0% | |
GAACCAATACGAGAAGCAAC+CGG | - | chr1.1:60019024-60019043 | None:intergenic | 45.0% | |
GATGACACTGATGTAATGGC+AGG | + | chr1.1:60019570-60019589 | MS.gene005120:intron | 45.0% | |
GCTTCCAATTCGAACAAGTC+CGG | - | chr1.1:60018964-60018983 | None:intergenic | 45.0% | |
GGTTAAACCCTCTTCAGCAA+TGG | - | chr1.1:60018353-60018372 | None:intergenic | 45.0% | |
GGTTCAAATGTTAGTCAGGG+GGG | + | chr1.1:60019510-60019529 | MS.gene005120:CDS | 45.0% | |
GTTCAAATGTTAGTCAGGGG+GGG | + | chr1.1:60019511-60019530 | MS.gene005120:CDS | 45.0% | |
TACCAAACAGTGATCGAGGA+TGG | - | chr1.1:60018407-60018426 | None:intergenic | 45.0% | |
TACTCTTGGTCCGAGGTTAA+CGG | + | chr1.1:60020429-60020448 | MS.gene005120:CDS | 45.0% | |
TCATGGACCGTATACAACCT+GGG | + | chr1.1:60018620-60018639 | MS.gene005120:CDS | 45.0% | |
TGAGGATGACCAGGATGTTA+CGG | + | chr1.1:60019392-60019411 | MS.gene005120:CDS | 45.0% | |
TGGAAAGTCCGTGTTAGTAC+TGG | + | chr1.1:60018850-60018869 | MS.gene005120:CDS | 45.0% | |
TGGATTCTGTTCATGGTGCT+TGG | + | chr1.1:60019897-60019916 | MS.gene005120:intron | 45.0% | |
TGGCGATTGACAGGTTACTA+TGG | + | chr1.1:60019917-60019936 | MS.gene005120:intron | 45.0% | |
TTCAAATGTTAGTCAGGGGG+GGG | + | chr1.1:60019512-60019531 | MS.gene005120:CDS | 45.0% | |
TTGACGGAGAAAGTTCCAAG+CGG | - | chr1.1:60019969-60019988 | None:intergenic | 45.0% | |
TTGAGACTTGAGGGATCCAT+AGG | - | chr1.1:60018316-60018335 | None:intergenic | 45.0% | |
TTTGGCTGATCGTGAGATTC+AGG | + | chr1.1:60018435-60018454 | MS.gene005120:CDS | 45.0% | |
TTTGTCTCGGCACAACAGAT+GGG | - | chr1.1:60019080-60019099 | None:intergenic | 45.0% | |
! | AATGCATGGCATTTGGAACC+GGG | + | chr1.1:60020361-60020380 | MS.gene005120:intron | 45.0% |
! | ACTCACTGACTGTGTGCTTA+CGG | - | chr1.1:60018222-60018241 | None:intergenic | 45.0% |
! | CGGACTAGGTACTTAAGATC+AGG | - | chr1.1:60019674-60019693 | None:intergenic | 45.0% |
! | CGTAACGGAAGTTACGTTTG+TGG | - | chr1.1:60020339-60020358 | None:intergenic | 45.0% |
! | CTGTTTGGTAGGACGTGTTT+TGG | + | chr1.1:60018417-60018436 | MS.gene005120:CDS | 45.0% |
! | CTTTTACCTTCTGCTTCTGC+AGG | + | chr1.1:60019291-60019310 | MS.gene005120:CDS | 45.0% |
! | GGTGTTAGTTTCAGACTCAG+TGG | - | chr1.1:60018386-60018405 | None:intergenic | 45.0% |
!! | ACGGCTAGGGTTTTGTATGT+GGG | - | chr1.1:60018203-60018222 | None:intergenic | 45.0% |
!! | AGACAAGCGGTTATTGACTC+TGG | + | chr1.1:60020103-60020122 | MS.gene005120:intron | 45.0% |
!! | CTGATGACGGAGTTCGTAAT+TGG | + | chr1.1:60018983-60019002 | MS.gene005120:CDS | 45.0% |
!! | GATGACGGAGTTCGTAATTG+GGG | + | chr1.1:60018985-60019004 | MS.gene005120:CDS | 45.0% |
!! | TACGGCTAGGGTTTTGTATG+TGG | - | chr1.1:60018204-60018223 | None:intergenic | 45.0% |
ACAGGCCCATGGTGCATATT+TGG | + | chr1.1:60020004-60020023 | MS.gene005120:intron | 50.0% | |
ACTGCTTGGCCATTCAGACA+AGG | + | chr1.1:60018933-60018952 | MS.gene005120:CDS | 50.0% | |
AGACTCAGTGGCGAGGTTTA+GGG | - | chr1.1:60018374-60018393 | None:intergenic | 50.0% | |
AGCCATACGCTCGCTGAAAT+AGG | - | chr1.1:60018464-60018483 | None:intergenic | 50.0% | |
AGTGCATTCAGGAGATGGTC+AGG | + | chr1.1:60020549-60020568 | MS.gene005120:intron | 50.0% | |
ATTGTCAGATGTTCCGACCG+AGG | + | chr1.1:60020126-60020145 | MS.gene005120:intron | 50.0% | |
CAACATGCTTCACTTTGGCG+AGG | - | chr1.1:60019242-60019261 | None:intergenic | 50.0% | |
CACCACCTGGATGAAAGTTG+CGG | - | chr1.1:60019131-60019150 | None:intergenic | 50.0% | |
CACCATCCTCGATCACTGTT+TGG | + | chr1.1:60018402-60018421 | MS.gene005120:CDS | 50.0% | |
CATGGACCGTATACAACCTG+GGG | + | chr1.1:60018621-60018640 | MS.gene005120:CDS | 50.0% | |
CCACGAAAAAGGATAGCCCT+CGG | - | chr1.1:60020146-60020165 | None:intergenic | 50.0% | |
CCATAGGAACGGTTGGAACA+AGG | - | chr1.1:60018300-60018319 | None:intergenic | 50.0% | |
CCATATGGACATCTGGGTTC+AGG | + | chr1.1:60018669-60018688 | MS.gene005120:CDS | 50.0% | |
CCATTCAGACAAGGTTTGCC+CGG | + | chr1.1:60018942-60018961 | MS.gene005120:CDS | 50.0% | |
CCCAGATGTCCATATGGTTC+AGG | - | chr1.1:60018666-60018685 | None:intergenic | 50.0% | |
CCTGAACCCAGATGTCCATA+TGG | - | chr1.1:60018672-60018691 | None:intergenic | 50.0% | |
CCTTGTTCCAACCGTTCCTA+TGG | + | chr1.1:60018297-60018316 | MS.gene005120:CDS | 50.0% | |
GAAAAAGGATAGCCCTCGGT+CGG | - | chr1.1:60020142-60020161 | None:intergenic | 50.0% | |
GAAAGTCCTGCAGAAGCAGA+AGG | - | chr1.1:60019300-60019319 | None:intergenic | 50.0% | |
GACGAAATCCTAGACCTCAG+TGG | + | chr1.1:60020065-60020084 | MS.gene005120:intron | 50.0% | |
GAGGATGACCAGGATGTTAC+GGG | + | chr1.1:60019393-60019412 | MS.gene005120:CDS | 50.0% | |
GCATGGAATTGTCGGGGTAT+AGG | + | chr1.1:60019632-60019651 | MS.gene005120:intron | 50.0% | |
GCCAAAGTGAAGCATGTTGC+TGG | + | chr1.1:60019243-60019262 | MS.gene005120:CDS | 50.0% | |
GCGCTGAGGATATGTCAGTA+TGG | + | chr1.1:60020455-60020474 | MS.gene005120:intron | 50.0% | |
GGACAACCCCAGGTTGTATA+CGG | - | chr1.1:60018630-60018649 | None:intergenic | 50.0% | |
GGGACAGATAGGAAAACGAG+TGG | - | chr1.1:60018278-60018297 | None:intergenic | 50.0% | |
GGTGAGCAAGAGTCTCACTT+AGG | - | chr1.1:60019721-60019740 | None:intergenic | 50.0% | |
GGTTACTATGGCTATCCCGA+TGG | + | chr1.1:60019929-60019948 | MS.gene005120:intron | 50.0% | |
GGTTCAGGTCGACAGATGTA+GGG | - | chr1.1:60018651-60018670 | None:intergenic | 50.0% | |
GTAACAAGGTCCTTGAACCC+CGG | - | chr1.1:60020382-60020401 | None:intergenic | 50.0% | |
GTCATGGACCGTATACAACC+TGG | + | chr1.1:60018619-60018638 | MS.gene005120:CDS | 50.0% | |
GTCCTACCAAACAGTGATCG+AGG | - | chr1.1:60018411-60018430 | None:intergenic | 50.0% | |
GTTGGAACAAGGGGACAGAT+AGG | - | chr1.1:60018289-60018308 | None:intergenic | 50.0% | |
GTTTGTCTCGGCACAACAGA+TGG | - | chr1.1:60019081-60019100 | None:intergenic | 50.0% | |
TACAATGCTCCCCTACACCT+CGG | + | chr1.1:60020305-60020324 | MS.gene005120:intron | 50.0% | |
TACTATGGCTATCCCGATGG+AGG | + | chr1.1:60019932-60019951 | MS.gene005120:intron | 50.0% | |
TAGTTTCAGACTCAGTGGCG+AGG | - | chr1.1:60018381-60018400 | None:intergenic | 50.0% | |
TCACTTGTAAACGGAGCAGC+AGG | - | chr1.1:60019366-60019385 | None:intergenic | 50.0% | |
TCAGCTTCCACACTCATCAC+AGG | + | chr1.1:60019318-60019337 | MS.gene005120:CDS | 50.0% | |
TCATTTACCTAGGCAGGCCT+GGG | - | chr1.1:60019604-60019623 | None:intergenic | 50.0% | |
TGACTGTGTGCTTACGGCTA+GGG | - | chr1.1:60018216-60018235 | None:intergenic | 50.0% | |
TGAGGAATCTGAGGATGACC+AGG | + | chr1.1:60019383-60019402 | MS.gene005120:CDS | 50.0% | |
TGCCTATTTCAGCGAGCGTA+TGG | + | chr1.1:60018459-60018478 | MS.gene005120:CDS | 50.0% | |
TGCTGCTCCGTTTACAAGTG+AGG | + | chr1.1:60019365-60019384 | MS.gene005120:CDS | 50.0% | |
TGGGCCATCATCAAGAACAC+GGG | - | chr1.1:60018575-60018594 | None:intergenic | 50.0% | |
TGGTTCAGGTCGACAGATGT+AGG | - | chr1.1:60018652-60018671 | None:intergenic | 50.0% | |
TGTCTTCCTATAGACCGCAC+CGG | + | chr1.1:60019785-60019804 | MS.gene005120:intron | 50.0% | |
TTCATTTACCTAGGCAGGCC+TGG | - | chr1.1:60019605-60019624 | None:intergenic | 50.0% | |
TTGTCAGATGTTCCGACCGA+GGG | + | chr1.1:60020127-60020146 | MS.gene005120:intron | 50.0% | |
! | AATGGCAGGTTCTGATACCC+AGG | + | chr1.1:60019584-60019603 | MS.gene005120:intron | 50.0% |
! | ATGCATGGCATTTGGAACCG+GGG | + | chr1.1:60020362-60020381 | MS.gene005120:intron | 50.0% |
! | ATTTGCTGCTGATGGGGATG+GGG | + | chr1.1:60019473-60019492 | MS.gene005120:CDS | 50.0% |
! | CACGGGCAGCATCCATTTTA+TGG | - | chr1.1:60018558-60018577 | None:intergenic | 50.0% |
! | CATTTGCTGCTGATGGGGAT+GGG | + | chr1.1:60019472-60019491 | MS.gene005120:CDS | 50.0% |
! | GAAGCAACCGGTTTCAGATC+AGG | - | chr1.1:60019012-60019031 | None:intergenic | 50.0% |
! | GACATCTGGGTTCAGGTTCA+TGG | + | chr1.1:60018676-60018695 | MS.gene005120:CDS | 50.0% |
! | GGGCAGCATCCATTTTATGG+TGG | - | chr1.1:60018555-60018574 | None:intergenic | 50.0% |
! | GTTCTGAACCCGTAACATCC+TGG | - | chr1.1:60019404-60019423 | None:intergenic | 50.0% |
! | TCATTTGCTGCTGATGGGGA+TGG | + | chr1.1:60019471-60019490 | MS.gene005120:CDS | 50.0% |
! | TTGCCCGGACTTGTTCGAAT+TGG | + | chr1.1:60018957-60018976 | MS.gene005120:CDS | 50.0% |
! | TTGGGGACCTGATCTGAAAC+CGG | + | chr1.1:60019002-60019021 | MS.gene005120:CDS | 50.0% |
!! | GTGTTCTTGATGATGGCCCA+TGG | + | chr1.1:60018575-60018594 | MS.gene005120:CDS | 50.0% |
!!! | GCGGGGGTCTAGCTTTATTT+TGG | + | chr1.1:60019813-60019832 | MS.gene005120:intron | 50.0% |
ACAGATGTAGGGACAACCCC+AGG | - | chr1.1:60018640-60018659 | None:intergenic | 55.0% | |
ACTCATCACAGGTTGCCCAG+TGG | + | chr1.1:60019329-60019348 | MS.gene005120:CDS | 55.0% | |
CACATGCGGCTAGTGCATTC+AGG | + | chr1.1:60020538-60020557 | MS.gene005120:intron | 55.0% | |
CAGACTCAGTGGCGAGGTTT+AGG | - | chr1.1:60018375-60018394 | None:intergenic | 55.0% | |
CAGGTAAACCGAGCACCACT+GGG | - | chr1.1:60019347-60019366 | None:intergenic | 55.0% | |
CATGGTGCTTGGCGATTGAC+AGG | + | chr1.1:60019908-60019927 | MS.gene005120:intron | 55.0% | |
CCGGGCAAACCTTGTCTGAA+TGG | - | chr1.1:60018945-60018964 | None:intergenic | 55.0% | |
CCTAGTCCGGCACTTCAATC+CGG | + | chr1.1:60019685-60019704 | MS.gene005120:intron | 55.0% | |
CGGCTAGTGCATTCAGGAGA+TGG | + | chr1.1:60020544-60020563 | MS.gene005120:intron | 55.0% | |
CTCGGCACAACAGATGGGAT+AGG | - | chr1.1:60019075-60019094 | None:intergenic | 55.0% | |
CTGACTGTGTGCTTACGGCT+AGG | - | chr1.1:60018217-60018236 | None:intergenic | 55.0% | |
CTTCGCATACTCTTGGTCCG+AGG | + | chr1.1:60020422-60020441 | MS.gene005120:CDS | 55.0% | |
GAGAGGTTAGACCGTGCTCT+TGG | + | chr1.1:60020199-60020218 | MS.gene005120:intron | 55.0% | |
GAGGGATCCATAGGAACGGT+TGG | - | chr1.1:60018307-60018326 | None:intergenic | 55.0% | |
GCACTTCTACGACCTCCATC+GGG | - | chr1.1:60019947-60019966 | None:intergenic | 55.0% | |
GCTGCCCGTGTTCTTGATGA+TGG | + | chr1.1:60018568-60018587 | MS.gene005120:CDS | 55.0% | |
GGAGCTTGGGGAGTTTGTCT+CGG | - | chr1.1:60019093-60019112 | None:intergenic | 55.0% | |
GGCACTTCTACGACCTCCAT+CGG | - | chr1.1:60019948-60019967 | None:intergenic | 55.0% | |
TGGGCAACCTGTGATGAGTG+TGG | - | chr1.1:60019328-60019347 | None:intergenic | 55.0% | |
TTTGCTGCTGATGGGGATGG+GGG | + | chr1.1:60019474-60019493 | MS.gene005120:CDS | 55.0% | |
! | GCATTTGGAACCGGGGTTCA+AGG | + | chr1.1:60020369-60020388 | MS.gene005120:intron | 55.0% |
! | TGTTACAGGTGCGGACTGCT+TGG | + | chr1.1:60018919-60018938 | MS.gene005120:CDS | 55.0% |
!! | CCGAGGGCTATCCTTTTTCG+TGG | + | chr1.1:60020143-60020162 | MS.gene005120:intron | 55.0% |
ACAGGTTGCCCAGTGGTGCT+CGG | + | chr1.1:60019336-60019355 | MS.gene005120:CDS | 60.0% | |
AGCAGCAGGCATGGGAGCTT+GGG | - | chr1.1:60019106-60019125 | None:intergenic | 60.0% | |
ATGGCTCGTGCTTGGAAGCC+AGG | + | chr1.1:60018478-60018497 | MS.gene005120:CDS | 60.0% | |
CCTCTACCGGTGCGGTCTAT+AGG | - | chr1.1:60019794-60019813 | None:intergenic | 60.0% | |
CGTTTGTGGGATTGAGGCCG+AGG | - | chr1.1:60020325-60020344 | None:intergenic | 60.0% | |
GAGTCTTGGTACGTCGCGAG+CGG | + | chr1.1:60020171-60020190 | MS.gene005120:intron | 60.0% | |
GCAGGTAAACCGAGCACCAC+TGG | - | chr1.1:60019348-60019367 | None:intergenic | 60.0% | |
GCTGGCCGCAACTTTCATCC+AGG | + | chr1.1:60019123-60019142 | MS.gene005120:CDS | 60.0% | |
GGATTGAGGCCGAGGTGTAG+GGG | - | chr1.1:60020317-60020336 | None:intergenic | 60.0% | |
GGCCGCAACTTTCATCCAGG+TGG | + | chr1.1:60019126-60019145 | MS.gene005120:CDS | 60.0% | |
GGGATTGAGGCCGAGGTGTA+GGG | - | chr1.1:60020318-60020337 | None:intergenic | 60.0% | |
TCAGCGCACGCCGTTAACCT+CGG | - | chr1.1:60020442-60020461 | None:intergenic | 60.0% | |
TCTGATACCCAGGCCTGCCT+AGG | + | chr1.1:60019594-60019613 | MS.gene005120:intron | 60.0% | |
TGAAAGTTGCGGCCAGCAGC+AGG | - | chr1.1:60019120-60019139 | None:intergenic | 60.0% | |
TGGGATTGAGGCCGAGGTGT+AGG | - | chr1.1:60020319-60020338 | None:intergenic | 60.0% | |
! | ATAGACCGCACCGGTAGAGG+CGG | + | chr1.1:60019794-60019813 | MS.gene005120:intron | 60.0% |
! | CCTATAGACCGCACCGGTAG+AGG | + | chr1.1:60019791-60019810 | MS.gene005120:intron | 60.0% |
!! | CCGGATTGAAGTGCCGGACT+AGG | - | chr1.1:60019688-60019707 | None:intergenic | 60.0% |
!! | GAGGTCGTAGAAGTGCCGCT+TGG | + | chr1.1:60019951-60019970 | MS.gene005120:intron | 60.0% |
!! | TCCAGGTGGTGCTGCTAGTG+CGG | + | chr1.1:60019140-60019159 | MS.gene005120:CDS | 60.0% |
ACCGCACTAGCAGCACCACC+TGG | - | chr1.1:60019144-60019163 | None:intergenic | 65.0% | |
AGCTAGACCCCCGCCTCTAC+CGG | - | chr1.1:60019807-60019826 | None:intergenic | 65.0% | |
CAAGCTCCCATGCCTGCTGC+TGG | + | chr1.1:60019105-60019124 | MS.gene005120:CDS | 65.0% | |
CAGCAGCAGGCATGGGAGCT+TGG | - | chr1.1:60019107-60019126 | None:intergenic | 65.0% | |
GAGGTTAACGGCGTGCGCTG+AGG | + | chr1.1:60020441-60020460 | MS.gene005120:CDS | 65.0% | |
GCAGCAGGCATGGGAGCTTG+GGG | - | chr1.1:60019105-60019124 | None:intergenic | 65.0% | |
GCGAGCGTATGGCTCGTGCT+TGG | + | chr1.1:60018470-60018489 | MS.gene005120:CDS | 65.0% | |
TCTTGGTACGTCGCGAGCGG+TGG | + | chr1.1:60020174-60020193 | MS.gene005120:intron | 65.0% | |
TTGCGGCCAGCAGCAGGCAT+GGG | - | chr1.1:60019114-60019133 | None:intergenic | 65.0% | |
! | TAGACCGCACCGGTAGAGGC+GGG | + | chr1.1:60019795-60019814 | MS.gene005120:intron | 65.0% |
GTTGCGGCCAGCAGCAGGCA+TGG | - | chr1.1:60019115-60019134 | None:intergenic | 70.0% | |
TGGTACGTCGCGAGCGGTGG+AGG | + | chr1.1:60020177-60020196 | MS.gene005120:intron | 70.0% | |
! | AGACCGCACCGGTAGAGGCG+GGG | + | chr1.1:60019796-60019815 | MS.gene005120:intron | 70.0% |
CGTCGCGAGCGGTGGAGGAG+AGG | + | chr1.1:60020182-60020201 | MS.gene005120:intron | 75.0% | |
GACCCCCGCCTCTACCGGTG+CGG | - | chr1.1:60019802-60019821 | None:intergenic | 75.0% | |
! | GACCGCACCGGTAGAGGCGG+GGG | + | chr1.1:60019797-60019816 | MS.gene005120:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 60018172 | 60020584 | 60018172 | ID=MS.gene005120 |
chr1.1 | mRNA | 60018172 | 60020584 | 60018172 | ID=MS.gene005120.t1;Parent=MS.gene005120 |
chr1.1 | exon | 60018172 | 60019548 | 60018172 | ID=MS.gene005120.t1.exon1;Parent=MS.gene005120.t1 |
chr1.1 | CDS | 60018172 | 60019548 | 60018172 | ID=cds.MS.gene005120.t1;Parent=MS.gene005120.t1 |
chr1.1 | exon | 60020415 | 60020467 | 60020415 | ID=MS.gene005120.t1.exon2;Parent=MS.gene005120.t1 |
chr1.1 | CDS | 60020415 | 60020467 | 60020415 | ID=cds.MS.gene005120.t1;Parent=MS.gene005120.t1 |
chr1.1 | exon | 60020560 | 60020584 | 60020560 | ID=MS.gene005120.t1.exon3;Parent=MS.gene005120.t1 |
chr1.1 | CDS | 60020560 | 60020584 | 60020560 | ID=cds.MS.gene005120.t1;Parent=MS.gene005120.t1 |
Gene Sequence |
Protein sequence |