AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051449

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051449.t1 MTR_6g033215 64.972 177 60 1 2 176 102 278 3.05e-82 256
MS.gene051449.t1 MTR_8g468010 65.789 76 26 0 108 183 1 76 1.21e-28 110
MS.gene051449.t1 MTR_6g053230 29.469 207 105 2 1 202 22 192 3.90e-26 111
MS.gene051449.t1 MTR_1g032270 62.162 74 28 0 91 164 1 74 2.12e-25 101
MS.gene051449.t1 MTR_0010s0370 29.730 148 104 0 23 170 30 177 1.99e-24 100
MS.gene051449.t1 MTR_0010s0350 29.730 148 104 0 23 170 30 177 1.99e-24 100
MS.gene051449.t1 MTR_6g053790 46.957 115 40 2 128 221 34 148 2.62e-23 100
MS.gene051449.t1 MTR_1g100687 44.211 95 53 0 278 372 133 227 1.75e-21 93.2
MS.gene051449.t1 MTR_4g020545 30.939 181 99 4 55 227 80 242 5.73e-21 93.2
MS.gene051449.t1 MTR_0042s0130 43.000 100 57 0 275 374 231 330 3.63e-20 91.7
MS.gene051449.t1 MTR_3g053920 26.339 224 125 6 22 234 31 225 8.41e-19 86.7
MS.gene051449.t1 MTR_6g034215 39.785 93 56 0 278 370 199 291 4.06e-18 85.5
MS.gene051449.t1 MTR_4g075740 37.410 139 67 4 2 138 22 142 7.05e-18 81.3
MS.gene051449.t1 MTR_2g055450 36.800 125 52 3 274 398 247 344 3.30e-16 80.9
MS.gene051449.t1 MTR_8g463110 37.255 102 60 2 275 374 192 291 4.81e-16 81.3
MS.gene051449.t1 MTR_3g024240 32.039 103 70 0 74 176 54 156 2.27e-15 74.7
MS.gene051449.t1 MTR_4g020630 38.462 104 64 0 267 370 120 223 2.50e-15 78.6
MS.gene051449.t1 MTR_2g061500 28.571 119 80 2 2 120 16 129 1.04e-14 71.6
MS.gene051449.t1 MTR_3g041640 69.048 42 13 0 108 149 1 42 2.85e-14 70.5
MS.gene051449.t1 MTR_0015s0120 40.506 79 45 1 298 374 8 86 3.51e-12 68.2
MS.gene051449.t1 MTR_1g051330 35.417 96 61 1 275 370 347 441 6.99e-12 68.2
MS.gene051449.t1 MTR_4g103530 31.461 89 61 0 50 138 5 93 1.68e-11 63.5
MS.gene051449.t1 MTR_7g011710 28.070 114 81 1 46 158 1 114 6.40e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 138 sgRNAs with CRISPR-Local

Find 479 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTCTTCTGGCAGACTTTC+TGG 0.031220 1.1:+47861939 None:intergenic
CCATGAACTCTACTGAAATT+TGG 0.115274 1.1:-47866242 MS.gene051449:CDS
CTGCTCGACCTCTGCCTTAT+TGG 0.148615 1.1:-47866498 MS.gene051449:CDS
AATTGTTACCTGCATTAAAT+TGG 0.230448 1.1:+47865759 None:intergenic
CACACTCGGTTCTGGAATAT+TGG 0.237990 1.1:-47861882 MS.gene051449:CDS
GTTCGAAGATAGGAGTATTA+AGG 0.274180 1.1:+47861817 None:intergenic
GGATTCATGGACAAAACTAT+TGG 0.300363 1.1:-47866195 MS.gene051449:CDS
TCATATCTCACACTCGGTTC+TGG 0.300895 1.1:-47861890 MS.gene051449:CDS
GGAAGGAAGCCCGTGGTTAT+TGG 0.305744 1.1:-47866322 MS.gene051449:CDS
CACCGGCCGACCACCGGAAT+TGG 0.306807 1.1:+47865814 None:intergenic
CAGGTCCATCAACTGCCTTT+TGG 0.315068 1.1:-47866216 MS.gene051449:CDS
ACTCTTCTGTCGTGCTGATT+AGG 0.316482 1.1:+47861795 None:intergenic
CATGAACTCTACTGAAATTT+GGG 0.317717 1.1:-47866241 MS.gene051449:CDS
TTTATCTTTCCTCAAACCTT+TGG 0.323009 1.1:+47865100 None:intergenic
AGGATAATTGTCAACCAATA+AGG 0.327397 1.1:-47863906 MS.gene051449:CDS
GTAAGCTCGTTGAATTCTTC+TGG 0.328168 1.1:+47861927 None:intergenic
CCAATCGCAACAGGCAGTTC+TGG 0.331434 1.1:-47864056 MS.gene051449:CDS
CGATTGGTCATAGTTGCTTT+AGG 0.337303 1.1:+47864072 None:intergenic
CCAAATTTCAGTAGAGTTCA+TGG 0.340490 1.1:+47866242 None:intergenic
GATTCATGGACAAAACTATT+GGG 0.349597 1.1:-47866194 MS.gene051449:CDS
GGAAAGAAATTGAAAATTGC+AGG 0.367464 1.1:-47863885 MS.gene051449:CDS
GTCCTTATGTGACTCAGAAA+TGG 0.367549 1.1:-47863999 MS.gene051449:CDS
AGGTTTGAGGAAAGATAAAA+TGG 0.370967 1.1:-47865096 MS.gene051449:CDS
CGTGCCGAGAACAATTCCTT+TGG 0.382872 1.1:-47865881 MS.gene051449:CDS
TCACCACTACTCTTCCAATA+AGG 0.388189 1.1:+47866484 None:intergenic
TATCCTTGCTCCACTGTTGA+AGG 0.388835 1.1:+47863923 None:intergenic
CATGGTGCAAATGTTCTCTA+AGG 0.389283 1.1:-47866364 MS.gene051449:CDS
TATGACGAAGATAACAACTA+TGG 0.391054 1.1:-47866135 MS.gene051449:CDS
TCCGGTGGTCGGCCGGTGGA+AGG 0.397278 1.1:-47865809 MS.gene051449:CDS
TGGTTAATTGAACCTGAGTT+TGG 0.404333 1.1:-47864021 MS.gene051449:CDS
CTCCAATTCCGGTGGTCGGC+CGG 0.421710 1.1:-47865816 MS.gene051449:CDS
TTGTTGCTGGTCAGAAAAGA+TGG 0.423081 1.1:-47865915 MS.gene051449:intron
GTTAAGTGCACTTCTATAGA+AGG 0.424859 1.1:-47863655 MS.gene051449:intron
TGAATCCAAAAGGCAGTTGA+TGG 0.428916 1.1:+47866211 None:intergenic
GAGCTAGTCGGCAGTCATAT+TGG 0.429755 1.1:-47866171 MS.gene051449:CDS
ATGAATTTGTTATCATCCAT+TGG 0.434188 1.1:+47866384 None:intergenic
GAGTGTGGAAGTCAGAGAAA+TGG 0.434541 1.1:-47861776 MS.gene051449:CDS
CCTTTCGCTGAAACAATTCA+AGG 0.440420 1.1:+47863605 None:intergenic
CCTTGAATTGTTTCAGCGAA+AGG 0.448692 1.1:-47863605 MS.gene051449:CDS
CAATGACTAGATCTTGTTGA+AGG 0.450462 1.1:+47866061 None:intergenic
GGCGGAAATACATGAGGTTA+CGG 0.450731 1.1:-47866107 MS.gene051449:CDS
GATGGCCGGAGCTCCAATTC+CGG 0.451150 1.1:-47865827 MS.gene051449:CDS
TCTGGAATATTGGTTTATTG+AGG 0.456567 1.1:-47861872 MS.gene051449:CDS
GTGGAAGGGACAAGCATTAA+CGG 0.460129 1.1:-47865794 MS.gene051449:CDS
GCAGAGGTCGAGCAGTTCAA+TGG 0.462481 1.1:+47866506 None:intergenic
CCCTTCCACCGGCCGACCAC+CGG 0.463305 1.1:+47865808 None:intergenic
CAACTATGACCAATCGCAAC+AGG 0.463686 1.1:-47864065 MS.gene051449:CDS
ATCCACCATCGAAGGCAGAC+TGG 0.472552 1.1:-47866445 MS.gene051449:CDS
GGCAGATCTTAACAATGTGC+TGG 0.475381 1.1:-47866343 MS.gene051449:CDS
GCGGAAATACATGAGGTTAC+GGG 0.483679 1.1:-47866106 MS.gene051449:CDS
AGTTCTGGTTTGAAAATGCT+TGG 0.485499 1.1:-47864041 MS.gene051449:CDS
TCAAGCAAGTGGATAATAGA+TGG 0.486305 1.1:-47865845 MS.gene051449:CDS
CCGTATGATCATTGTGAAGA+AGG 0.489004 1.1:-47866295 MS.gene051449:CDS
ACCTCCAAAGGAATTGTTCT+CGG 0.489825 1.1:+47865877 None:intergenic
GCCGAGAACAATTCCTTTGG+AGG 0.491160 1.1:-47865878 MS.gene051449:CDS
TTCTCTAACTTATGCATGAT+CGG 0.494078 1.1:+47863958 None:intergenic
TCCTTATGTGACTCAGAAAT+GGG 0.494294 1.1:-47863998 MS.gene051449:CDS
GAGTTCATGGGTAACGTCAA+TGG 0.494849 1.1:+47866255 None:intergenic
CTCTACTGAAATTTGGGTAC+AGG 0.502465 1.1:-47866235 MS.gene051449:CDS
TCCCATTTCTGAGTCACATA+AGG 0.503039 1.1:+47863997 None:intergenic
ACGGGTGGAGATTGCGTTGG+AGG 0.505663 1.1:-47866088 MS.gene051449:CDS
TAACAAAGCAAGTCAACAAA+AGG 0.505812 1.1:-47865069 MS.gene051449:CDS
CCGGTGGTCGGCCGGTGGAA+GGG 0.506514 1.1:-47865808 MS.gene051449:CDS
TGCCTTCGATGGTGGATAAG+TGG 0.507624 1.1:+47866451 None:intergenic
ATAGAGTTTATGTCTGCAGC+TGG 0.508254 1.1:-47865161 MS.gene051449:intron
CGGGCCGCACCAAAGGTTTG+AGG 0.509505 1.1:-47865109 MS.gene051449:CDS
CTAGTCATTGAAAGAAGTGC+TGG 0.512806 1.1:-47866048 MS.gene051449:intron
AATGGATGATAACAAATTCA+TGG 0.515544 1.1:-47866382 MS.gene051449:CDS
TTAATGCTTGTCCCTTCCAC+CGG 0.517655 1.1:+47865797 None:intergenic
GACCACCGGAATTGGAGCTC+CGG 0.520557 1.1:+47865822 None:intergenic
TGCTGATTAGGTTCGAAGAT+AGG 0.520658 1.1:+47861807 None:intergenic
TCAGCGAAAGGATGGAGATC+GGG 0.521797 1.1:-47863593 MS.gene051449:intron
ACTCAGAAATGGGAGGGGTA+TGG 0.525976 1.1:-47863988 MS.gene051449:CDS
CCTTCTTCACAATGATCATA+CGG 0.526987 1.1:+47866295 None:intergenic
AATGACTAGATCTTGTTGAA+GGG 0.527036 1.1:+47866062 None:intergenic
ATGGAAAATTTGAACTTGAA+CGG 0.529141 1.1:-47866561 MS.gene051449:CDS
GAGAACAATTCCTTTGGAGG+TGG 0.530436 1.1:-47865875 MS.gene051449:CDS
CCAGAACTGCCTGTTGCGAT+TGG 0.533004 1.1:+47864056 None:intergenic
CAATTCCGGTGGTCGGCCGG+TGG 0.534143 1.1:-47865813 MS.gene051449:CDS
ACTGGGTAACATGTGGTGTC+CGG 0.536208 1.1:-47866427 MS.gene051449:CDS
TTCAGCGAAAGGATGGAGAT+CGG 0.544717 1.1:-47863594 MS.gene051449:CDS
AACAATGCGGGCCGCACCAA+AGG 0.546310 1.1:-47865116 MS.gene051449:CDS
TCCACCATCGAAGGCAGACT+GGG 0.546595 1.1:-47866444 MS.gene051449:CDS
AACAACTTCATCTTCATCAC+CGG 0.546607 1.1:+47866408 None:intergenic
TAGTATCTTCGTTGCTAACA+AGG 0.547169 1.1:+47861847 None:intergenic
CATTGTGAAGAAGGTAGCCA+TGG 0.547740 1.1:-47866286 MS.gene051449:CDS
TCAACAAAAGGCTCTCACTC+TGG 0.549814 1.1:-47865057 MS.gene051449:CDS
ATGACTAGATCTTGTTGAAG+GGG 0.552749 1.1:+47866063 None:intergenic
TGTTGCTGGTCAGAAAAGAT+GGG 0.552770 1.1:-47865914 MS.gene051449:intron
GAATTGTTTCAGCGAAAGGA+TGG 0.553351 1.1:-47863601 MS.gene051449:CDS
CAAATTTCAGTAGAGTTCAT+GGG 0.562315 1.1:+47866243 None:intergenic
GTTACGGGTGGAGATTGCGT+TGG 0.563143 1.1:-47866091 MS.gene051449:CDS
ACCCAGTCTGCCTTCGATGG+TGG 0.563303 1.1:+47866443 None:intergenic
GGCATTGTTTCTAGCAAAAG+CGG 0.564771 1.1:+47864093 None:intergenic
GGAGCTCCAATTCCGGTGGT+CGG 0.565959 1.1:-47865820 MS.gene051449:CDS
AATTTGAACTTGAACGGAGA+CGG 0.569220 1.1:-47866555 MS.gene051449:CDS
TGATGATGAACCACCTCCAA+AGG 0.569794 1.1:+47865865 None:intergenic
GCAAGTGGATAATAGATGGC+CGG 0.579685 1.1:-47865841 MS.gene051449:CDS
AGGTATGAACGGTATAGCTA+AGG 0.581553 1.1:-47863635 MS.gene051449:CDS
CAGACAAGCCAATTTAATGC+AGG 0.589099 1.1:-47865767 MS.gene051449:intron
CGTCAATGGATCTTCTCCCA+TGG 0.602762 1.1:+47866269 None:intergenic
AGTTCAATGGAAGACAAAGC+TGG 0.603658 1.1:+47866519 None:intergenic
TTGTTCTCGGCACGCAAGTG+AGG 0.604069 1.1:+47865890 None:intergenic
GTTACCCAGTCTGCCTTCGA+TGG 0.604738 1.1:+47866440 None:intergenic
TACGGTTATCCAATAACCAC+GGG 0.604826 1.1:+47866313 None:intergenic
AAAACTATTGGGGAGCTAGT+CGG 0.606072 1.1:-47866183 MS.gene051449:CDS
AACCTCATGTATTTCCGCCA+CGG 0.606155 1.1:+47866111 None:intergenic
GTGGTTCATCATCAAGCAAG+TGG 0.606848 1.1:-47865856 MS.gene051449:CDS
GCATTGTTTCTAGCAAAAGC+GGG 0.609484 1.1:+47864094 None:intergenic
GATCTTAACAATGTGCTGGA+AGG 0.609963 1.1:-47866339 MS.gene051449:CDS
TATGTGACTCAGAAATGGGA+GGG 0.610417 1.1:-47863994 MS.gene051449:CDS
CTGCCTTATTGGAAGAGTAG+TGG 0.610559 1.1:-47866487 MS.gene051449:CDS
CGACCTTCAACAGTGGAGCA+AGG 0.611859 1.1:-47863926 MS.gene051449:CDS
GGCCGGAGCTCCAATTCCGG+TGG 0.613087 1.1:-47865824 MS.gene051449:CDS
CTTTCCTCAAACCTTTGGTG+CGG 0.617036 1.1:+47865105 None:intergenic
GCACGGTCGACCTTCAACAG+TGG 0.619436 1.1:-47863933 MS.gene051449:CDS
CTACTCTTCCAATAAGGCAG+AGG 0.622144 1.1:+47866490 None:intergenic
ACTTGAAAGAGTTCGAACTC+AGG 0.624350 1.1:-47863857 MS.gene051449:intron
GTCCACTTATCCACCATCGA+AGG 0.626205 1.1:-47866453 MS.gene051449:CDS
GAAGATGAAGTTGTTGCCAA+TGG 0.626924 1.1:-47866400 MS.gene051449:CDS
GTCACATAAGGACCAAACTC+AGG 0.627866 1.1:+47864009 None:intergenic
ATTCATGGACAAAACTATTG+GGG 0.633447 1.1:-47866193 MS.gene051449:CDS
TTGAACTTGAACGGAGACGG+AGG 0.647419 1.1:-47866552 MS.gene051449:CDS
TTATGTGACTCAGAAATGGG+AGG 0.650882 1.1:-47863995 MS.gene051449:CDS
GAAATACATGAGGTTACGGG+TGG 0.657266 1.1:-47866103 MS.gene051449:CDS
ACTTATGCATGATCGGCGTG+TGG 0.662074 1.1:+47863965 None:intergenic
ATGTGACTCAGAAATGGGAG+GGG 0.663436 1.1:-47863993 MS.gene051449:CDS
ATTGTGAAGAAGGTAGCCAT+GGG 0.668186 1.1:-47866285 MS.gene051449:CDS
GACCGTGGCGGAAATACATG+AGG 0.674651 1.1:-47866113 MS.gene051449:CDS
ATACGGTTATCCAATAACCA+CGG 0.679804 1.1:+47866312 None:intergenic
ACTTCTATAGAAGGTATGAA+CGG 0.684448 1.1:-47863646 MS.gene051449:CDS
AAGGCAGACTGGGTAACATG+TGG 0.688127 1.1:-47866434 MS.gene051449:CDS
ATCAGCACGACAGAAGAGTG+TGG 0.689661 1.1:-47861791 MS.gene051449:CDS
GCATAAGTTAGAGAATTGCA+CGG 0.696083 1.1:-47863950 MS.gene051449:CDS
ATGTGCTGGAAGGAAGCCCG+TGG 0.720087 1.1:-47866329 MS.gene051449:CDS
AAGATAACAACTATGGACCG+TGG 0.725032 1.1:-47866128 MS.gene051449:CDS
ATAACAACTATGGACCGTGG+CGG 0.739702 1.1:-47866125 MS.gene051449:CDS
GAAGGGACAAGCATTAACGG+TGG 0.768678 1.1:-47865791 MS.gene051449:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAATAATTGATGTTTG+AGG + chr1.1:47864497-47864516 None:intergenic 15.0%
!! TCAAAAATTATTATTACATC+CGG + chr1.1:47863641-47863660 None:intergenic 15.0%
!! ATAATCTTGCTAAATTTCTT+AGG + chr1.1:47863916-47863935 None:intergenic 20.0%
!! ATATTAAATGGTGAAAAGAT+TGG - chr1.1:47865387-47865406 MS.gene051449:intron 20.0%
!! ATCTATGTTATTGTTAAGAA+AGG - chr1.1:47862882-47862901 MS.gene051449:intron 20.0%
!! TTGTCTTTCTAATAAAATTG+AGG - chr1.1:47863667-47863686 MS.gene051449:intron 20.0%
!! TTTCTCTATATCAACAATAA+TGG + chr1.1:47865976-47865995 None:intergenic 20.0%
!!! ATATCAACAATAATGGATTT+AGG + chr1.1:47865969-47865988 None:intergenic 20.0%
!!! TATCAACAATAATGGATTTA+GGG + chr1.1:47865968-47865987 None:intergenic 20.0%
!!! TTGTTAAAGATGATGTTTTT+TGG - chr1.1:47864545-47864564 MS.gene051449:intron 20.0%
!!! TTTTCAATTTCTTTCCTTAT+TGG + chr1.1:47864433-47864452 None:intergenic 20.0%
! AAATGGCAAAGATATTAATG+TGG - chr1.1:47862738-47862757 MS.gene051449:intron 25.0%
! AAATTACTCACAAAATCATG+TGG - chr1.1:47863796-47863815 MS.gene051449:intron 25.0%
! AACTCTATAGGCATTAAAAT+AGG + chr1.1:47863149-47863168 None:intergenic 25.0%
! AATACAACCATAATCTTTCA+TGG - chr1.1:47863298-47863317 MS.gene051449:intron 25.0%
! AATGAAAAAACAAACAATGC+GGG - chr1.1:47863194-47863213 MS.gene051449:intron 25.0%
! AATGGATGATAACAAATTCA+TGG - chr1.1:47861940-47861959 MS.gene051449:CDS 25.0%
! AATTGTTACCTGCATTAAAT+TGG + chr1.1:47862566-47862585 None:intergenic 25.0%
! AGGTAATGATATATGTGTAT+GGG - chr1.1:47866322-47866341 MS.gene051449:CDS 25.0%
! ATAAATAAATTCCTAGCTGA+AGG - chr1.1:47862817-47862836 MS.gene051449:intron 25.0%
! ATAATGCTTTAACTGCTATT+GGG - chr1.1:47865178-47865197 MS.gene051449:intron 25.0%
! ATGAAAGATTATGGTTGTAT+TGG + chr1.1:47863299-47863318 None:intergenic 25.0%
! ATGGAAAATTTGAACTTGAA+CGG - chr1.1:47861761-47861780 MS.gene051449:CDS 25.0%
! CAGCTAGGAATTTATTTATT+TGG + chr1.1:47862816-47862835 None:intergenic 25.0%
! GAATGAAAAAACAAACAATG+CGG - chr1.1:47863193-47863212 MS.gene051449:intron 25.0%
! GACTACTCTGTTATATTAAA+TGG - chr1.1:47865375-47865394 MS.gene051449:intron 25.0%
! TGTTAAGAAAGGAAAGAATA+GGG - chr1.1:47862893-47862912 MS.gene051449:intron 25.0%
! TTAAACTCTTCAACAGAAAA+CGG + chr1.1:47864817-47864836 None:intergenic 25.0%
! TTGTTAAGAAAGGAAAGAAT+AGG - chr1.1:47862892-47862911 MS.gene051449:intron 25.0%
!! AGAAAATGTTGAACTCATTT+TGG - chr1.1:47865991-47866010 MS.gene051449:intron 25.0%
!! TTTGAAATTAGACATAAGCA+AGG - chr1.1:47865251-47865270 MS.gene051449:intron 25.0%
!!! ATGAATTTGTTATCATCCAT+TGG + chr1.1:47861941-47861960 None:intergenic 25.0%
!!! ATGATGTTTTTTGGAAACAA+CGG - chr1.1:47864554-47864573 MS.gene051449:intron 25.0%
!!! ATTTCAAATCATCGGTTTTA+TGG - chr1.1:47862591-47862610 MS.gene051449:intron 25.0%
!!! CTTGTTAAAGTATTTTGCTT+TGG + chr1.1:47866195-47866214 None:intergenic 25.0%
!!! TCAATTATTTTAATGCTCTG+AGG - chr1.1:47864503-47864522 MS.gene051449:intron 25.0%
!!! TTTGAAACAAATTTTGTTGC+TGG - chr1.1:47862394-47862413 MS.gene051449:intron 25.0%
AAAATTATCTGTATGCCCAA+TGG + chr1.1:47862362-47862381 None:intergenic 30.0%
AACAAAAGATGGGATATGAT+TGG + chr1.1:47865558-47865577 None:intergenic 30.0%
AAGAAATGAGTTGTATTGCA+TGG - chr1.1:47863549-47863568 MS.gene051449:intron 30.0%
AAGACTTAGCATTCACAAAA+AGG - chr1.1:47866064-47866083 MS.gene051449:CDS 30.0%
AAGATAATGATACTCTCACA+CGG - chr1.1:47864791-47864810 MS.gene051449:intron 30.0%
AAGATACTCATGATATACGA+AGG + chr1.1:47865939-47865958 None:intergenic 30.0%
AATCTAGTGACAATGTTATG+CGG + chr1.1:47866170-47866189 None:intergenic 30.0%
AATGACTAGATCTTGTTGAA+GGG + chr1.1:47862263-47862282 None:intergenic 30.0%
AATGGAGGAAAAATTGGATA+GGG - chr1.1:47864126-47864145 MS.gene051449:CDS 30.0%
AGCAAAAACAATTTAGGAGT+TGG - chr1.1:47863069-47863088 MS.gene051449:intron 30.0%
AGGATAATTGTCAACCAATA+AGG - chr1.1:47864416-47864435 MS.gene051449:intron 30.0%
AGGATTGATTGATATCCATA+TGG - chr1.1:47864057-47864076 MS.gene051449:CDS 30.0%
AGGTTTGAGGAAAGATAAAA+TGG - chr1.1:47863226-47863245 MS.gene051449:intron 30.0%
ATGTTTCAGAAAAGAAAGGA+AGG - chr1.1:47863981-47864000 MS.gene051449:CDS 30.0%
ATTACATTAGCATCAAAGAG+AGG + chr1.1:47863500-47863519 None:intergenic 30.0%
ATTCATGGACAAAACTATTG+GGG - chr1.1:47862129-47862148 MS.gene051449:intron 30.0%
ATTGCGGTATTTCAAATCAT+CGG - chr1.1:47862583-47862602 MS.gene051449:intron 30.0%
ATTTCTGCTGTAGAAAACTT+CGG + chr1.1:47865694-47865713 None:intergenic 30.0%
CAAATTTCAGTAGAGTTCAT+GGG + chr1.1:47862082-47862101 None:intergenic 30.0%
CAAGTGAGCAAAAACAATTT+AGG - chr1.1:47863063-47863082 MS.gene051449:intron 30.0%
CAGGTAATGATATATGTGTA+TGG - chr1.1:47866321-47866340 MS.gene051449:CDS 30.0%
CATGAACTCTACTGAAATTT+GGG - chr1.1:47862081-47862100 MS.gene051449:intron 30.0%
CCAATCTTTCATAGATGATT+GGG + chr1.1:47865028-47865047 None:intergenic 30.0%
CTCTACTTTCAAATTTGTGA+AGG - chr1.1:47865821-47865840 MS.gene051449:CDS 30.0%
CTTCACAAATTTGAAAGTAG+AGG + chr1.1:47865823-47865842 None:intergenic 30.0%
CTTCATGTTTCAGAAAAGAA+AGG - chr1.1:47863977-47863996 MS.gene051449:CDS 30.0%
CTTTAACAAGTGTGATTTCT+TGG - chr1.1:47866205-47866224 MS.gene051449:CDS 30.0%
GAAGGTAAAGATAATCAGAA+AGG - chr1.1:47863824-47863843 MS.gene051449:intron 30.0%
GATAATGCTTTAACTGCTAT+TGG - chr1.1:47865177-47865196 MS.gene051449:intron 30.0%
GATTCATGGACAAAACTATT+GGG - chr1.1:47862128-47862147 MS.gene051449:intron 30.0%
GGAAAGAAATTGAAAATTGC+AGG - chr1.1:47864437-47864456 MS.gene051449:intron 30.0%
GTCATAATCCAAGATATGTT+TGG - chr1.1:47866240-47866259 MS.gene051449:CDS 30.0%
GTTAAGAAAGGAAAGAATAG+GGG - chr1.1:47862894-47862913 MS.gene051449:intron 30.0%
TAAATACTCTTGAGTGTCAA+AGG - chr1.1:47862662-47862681 MS.gene051449:intron 30.0%
TAACAAAGCAAGTCAACAAA+AGG - chr1.1:47863253-47863272 MS.gene051449:intron 30.0%
TAATGTGCTTTACAAGATAG+TGG - chr1.1:47865065-47865084 MS.gene051449:CDS 30.0%
TATGACGAAGATAACAACTA+TGG - chr1.1:47862187-47862206 MS.gene051449:intron 30.0%
TCCAATCTTTCATAGATGAT+TGG + chr1.1:47865029-47865048 None:intergenic 30.0%
TCGAGAAACACTAATCAAAT+CGG - chr1.1:47865899-47865918 MS.gene051449:CDS 30.0%
TCTCTTTGATGCTAATGTAA+TGG - chr1.1:47863499-47863518 MS.gene051449:intron 30.0%
TTAAGAAAGGAAAGAATAGG+GGG - chr1.1:47862895-47862914 MS.gene051449:intron 30.0%
TTCTCTAACTTATGCATGAT+CGG + chr1.1:47864367-47864386 None:intergenic 30.0%
TTCTGTTGAAGAGTTTAAAG+AGG - chr1.1:47864819-47864838 MS.gene051449:intron 30.0%
TTGAAATTGAACTCTTGTCT+AGG - chr1.1:47862625-47862644 MS.gene051449:intron 30.0%
TTGAGATTAGGAATTGTACT+CGG + chr1.1:47863596-47863615 None:intergenic 30.0%
TTGATTGATATCCATATGGA+AGG - chr1.1:47864061-47864080 MS.gene051449:CDS 30.0%
TTTAATGCAGGTAACAATTG+CGG - chr1.1:47862567-47862586 MS.gene051449:intron 30.0%
TTTATCTTTCCTCAAACCTT+TGG + chr1.1:47863225-47863244 None:intergenic 30.0%
! AAACCATTGATTAACCAAGT+AGG + chr1.1:47864016-47864035 None:intergenic 30.0%
! AAATGTTGAACTCATTTTGG+TGG - chr1.1:47865994-47866013 MS.gene051449:intron 30.0%
! ACTTCTATAGAAGGTATGAA+CGG - chr1.1:47864676-47864695 MS.gene051449:intron 30.0%
! ACTTCTGAAAGTTTATAGAC+TGG + chr1.1:47865671-47865690 None:intergenic 30.0%
! ATCTTTTCATATCTCACACT+CGG - chr1.1:47866426-47866445 MS.gene051449:CDS 30.0%
! CTTTGCCATTTAAATCCTTT+GGG + chr1.1:47862729-47862748 None:intergenic 30.0%
! TCTTTGCCATTTAAATCCTT+TGG + chr1.1:47862730-47862749 None:intergenic 30.0%
! TGGAGATTAACATGTTTCTA+TGG - chr1.1:47863851-47863870 MS.gene051449:intron 30.0%
! TTTTCATCATTTGTGCGAAA+GGG - chr1.1:47865463-47865482 MS.gene051449:intron 30.0%
!! AAACAATTTAGGAGTTGGTA+CGG - chr1.1:47863074-47863093 MS.gene051449:intron 30.0%
!! AATGTTGAACTCATTTTGGT+GGG - chr1.1:47865995-47866014 MS.gene051449:intron 30.0%
!! CAAAAACTTTTAAAGAAGCC+TGG + chr1.1:47864895-47864914 None:intergenic 30.0%
!! CAGGCTTCTTTAAAAGTTTT+TGG - chr1.1:47864893-47864912 MS.gene051449:intron 30.0%
!! TCTGGAATATTGGTTTATTG+AGG - chr1.1:47866450-47866469 MS.gene051449:CDS 30.0%
!! TGTGAGAGTATCATTATCTT+GGG + chr1.1:47864791-47864810 None:intergenic 30.0%
!! TTAGTTAGTTCTGGTACAAA+GGG + chr1.1:47862787-47862806 None:intergenic 30.0%
!! TTCTAAGATTTGGGAAATAG+AGG + chr1.1:47865736-47865755 None:intergenic 30.0%
!!! AAAAGTTTTTGGAGTAGTTG+CGG - chr1.1:47864904-47864923 MS.gene051449:intron 30.0%
!!! GCTTGTTTTTGGTTAGAAAA+TGG - chr1.1:47864946-47864965 MS.gene051449:intron 30.0%
!!! TGATGTTTTTTGGAAACAAC+GGG - chr1.1:47864555-47864574 MS.gene051449:intron 30.0%
!!! TTGCGGTACAGATATTTTTT+AGG - chr1.1:47864921-47864940 MS.gene051449:intron 30.0%
!!! TTTTTTAGGCTGCTTGTTTT+TGG - chr1.1:47864935-47864954 MS.gene051449:intron 30.0%
AAAGATATTAATGTGGAGGG+AGG - chr1.1:47862745-47862764 MS.gene051449:intron 35.0%
AACAACTTCATCTTCATCAC+CGG + chr1.1:47861917-47861936 None:intergenic 35.0%
AACATCACTCTTATTCCGAA+AGG - chr1.1:47864997-47865016 MS.gene051449:intron 35.0%
AAGATAATCAGAAAGGAACG+TGG - chr1.1:47863831-47863850 MS.gene051449:intron 35.0%
AAGCTAAAAGTAGTCAAGCT+CGG - chr1.1:47865604-47865623 MS.gene051449:intron 35.0%
AATTTGAACTTGAACGGAGA+CGG - chr1.1:47861767-47861786 MS.gene051449:CDS 35.0%
AATTTGTGAAGGATAGAGTG+TGG - chr1.1:47865832-47865851 MS.gene051449:CDS 35.0%
AGACCTACTTGGTTAATCAA+TGG - chr1.1:47864010-47864029 MS.gene051449:CDS 35.0%
AGCACATTACACAAAGCAAT+CGG + chr1.1:47865054-47865073 None:intergenic 35.0%
AGGCTTATGATAGAATCGAT+TGG - chr1.1:47865271-47865290 MS.gene051449:intron 35.0%
ATACGGTTATCCAATAACCA+CGG + chr1.1:47862013-47862032 None:intergenic 35.0%
ATGAAAAGGTAAGGTGACAA+CGG + chr1.1:47865450-47865469 None:intergenic 35.0%
ATGACTAGATCTTGTTGAAG+GGG + chr1.1:47862262-47862281 None:intergenic 35.0%
CAAAATCATGTGGATCTTGA+AGG - chr1.1:47863806-47863825 MS.gene051449:intron 35.0%
CAACACAAAAGCAAGAATCA+AGG + chr1.1:47863712-47863731 None:intergenic 35.0%
CAAGACTAAAGGTAATGAAG+GGG - chr1.1:47865221-47865240 MS.gene051449:intron 35.0%
CAAGATTATCATCATTGTCG+TGG - chr1.1:47863927-47863946 MS.gene051449:CDS 35.0%
CAATGACTAGATCTTGTTGA+AGG + chr1.1:47862264-47862283 None:intergenic 35.0%
CAATGGAGGAAAAATTGGAT+AGG - chr1.1:47864125-47864144 MS.gene051449:CDS 35.0%
CATAACAAAAGGAACACCAA+AGG - chr1.1:47866020-47866039 MS.gene051449:intron 35.0%
CCAAATTTCAGTAGAGTTCA+TGG + chr1.1:47862083-47862102 None:intergenic 35.0%
CCATGAACTCTACTGAAATT+TGG - chr1.1:47862080-47862099 MS.gene051449:intron 35.0%
CCCAATCATCTATGAAAGAT+TGG - chr1.1:47865025-47865044 MS.gene051449:intron 35.0%
CCTTCTTCACAATGATCATA+CGG + chr1.1:47862030-47862049 None:intergenic 35.0%
CTAATCTCAAATACCTGAAC+CGG - chr1.1:47863606-47863625 MS.gene051449:CDS 35.0%
CTTAGCATTCACAAAAAGGA+AGG - chr1.1:47866068-47866087 MS.gene051449:CDS 35.0%
CTTTCGCACAAATGATGAAA+AGG + chr1.1:47865464-47865483 None:intergenic 35.0%
CTTTGATGCTAATGTAATGG+CGG - chr1.1:47863502-47863521 MS.gene051449:intron 35.0%
GAATGAAGATTCTGACAACA+TGG - chr1.1:47862978-47862997 MS.gene051449:intron 35.0%
GCAAGACTAAAGGTAATGAA+GGG - chr1.1:47865220-47865239 MS.gene051449:intron 35.0%
GCAATACAACTCATTTCTTC+TGG + chr1.1:47863548-47863567 None:intergenic 35.0%
GCACAAATGATGAAAAGGTA+AGG + chr1.1:47865459-47865478 None:intergenic 35.0%
GCATAAGTTAGAGAATTGCA+CGG - chr1.1:47864372-47864391 MS.gene051449:intron 35.0%
GCGAGCAGTTAACAAAATTA+GGG - chr1.1:47864645-47864664 MS.gene051449:intron 35.0%
GGAAAATTCTGCTTCATTTG+CGG - chr1.1:47862334-47862353 MS.gene051449:intron 35.0%
GGATTCATGGACAAAACTAT+TGG - chr1.1:47862127-47862146 MS.gene051449:intron 35.0%
GGCAAAGATATTAATGTGGA+GGG - chr1.1:47862742-47862761 MS.gene051449:intron 35.0%
GGCTTATGATAGAATCGATT+GGG - chr1.1:47865272-47865291 MS.gene051449:intron 35.0%
GGTTCTTGCTAACAGATTAA+AGG - chr1.1:47865092-47865111 MS.gene051449:CDS 35.0%
GTTAAGTGCACTTCTATAGA+AGG - chr1.1:47864667-47864686 MS.gene051449:intron 35.0%
GTTGTATTGCATGGAATTGT+CGG - chr1.1:47863558-47863577 MS.gene051449:intron 35.0%
TACATGCAATGCAAGACTAA+AGG - chr1.1:47865210-47865229 MS.gene051449:intron 35.0%
TAGTATCTTCGTTGCTAACA+AGG + chr1.1:47866478-47866497 None:intergenic 35.0%
TCAAGCAAGTGGATAATAGA+TGG - chr1.1:47862477-47862496 MS.gene051449:intron 35.0%
TCCTTATGTGACTCAGAAAT+GGG - chr1.1:47864324-47864343 MS.gene051449:intron 35.0%
TGAGATTAGGAATTGTACTC+GGG + chr1.1:47863595-47863614 None:intergenic 35.0%
TGCAAGACTAAAGGTAATGA+AGG - chr1.1:47865219-47865238 MS.gene051449:intron 35.0%
TGGCAAAGATATTAATGTGG+AGG - chr1.1:47862741-47862760 MS.gene051449:intron 35.0%
TGGTTAATTGAACCTGAGTT+TGG - chr1.1:47864301-47864320 MS.gene051449:intron 35.0%
TTCACGTGGTTCAAAAGTTT+GGG - chr1.1:47864091-47864110 MS.gene051449:CDS 35.0%
TTCATCACTTATTCGTCAAG+CGG - chr1.1:47865488-47865507 MS.gene051449:intron 35.0%
TTGTATTGCATGGAATTGTC+GGG - chr1.1:47863559-47863578 MS.gene051449:intron 35.0%
TTGTTAGTGCAGGATACAAA+TGG - chr1.1:47866288-47866307 MS.gene051449:CDS 35.0%
TTTCGGAATAAGAGTGATGT+TGG + chr1.1:47864998-47865017 None:intergenic 35.0%
TTTGATGCTAATGTAATGGC+GGG - chr1.1:47863503-47863522 MS.gene051449:intron 35.0%
TTTGATTAGTGTTTCTCGAC+CGG + chr1.1:47865898-47865917 None:intergenic 35.0%
! AACATGTTTCTATGGCTTTC+CGG - chr1.1:47863859-47863878 MS.gene051449:CDS 35.0%
! AGTGATGTTGGTGGAATTTA+AGG + chr1.1:47864986-47865005 None:intergenic 35.0%
! AGTTTTCTACAGCAGAAATG+TGG - chr1.1:47865695-47865714 MS.gene051449:intron 35.0%
! ATGTTGGTGGAATTTAAGGT+TGG + chr1.1:47864982-47865001 None:intergenic 35.0%
! CTTTTCATCATTTGTGCGAA+AGG - chr1.1:47865462-47865481 MS.gene051449:intron 35.0%
! GAGGTCAAGAACTGAATTTT+TGG - chr1.1:47863385-47863404 MS.gene051449:intron 35.0%
! GTTTTGTCCATGAATCCAAA+AGG + chr1.1:47862124-47862143 None:intergenic 35.0%
! TCAGTTCTTGACCTCTTTTT+AGG + chr1.1:47863380-47863399 None:intergenic 35.0%
!! AGTTCTGGTTTGAAAATGCT+TGG - chr1.1:47864281-47864300 MS.gene051449:intron 35.0%
!! ATGTTGAACTCATTTTGGTG+GGG - chr1.1:47865996-47866015 MS.gene051449:intron 35.0%
!! CAAATGTATGAAAGTGCTTC+TGG - chr1.1:47865645-47865664 MS.gene051449:intron 35.0%
!! CATATCCCATCTTTTGTTTG+CGG - chr1.1:47865560-47865579 MS.gene051449:intron 35.0%
!! CATGGAAAAACTTGGTGTTA+AGG + chr1.1:47864609-47864628 None:intergenic 35.0%
!! CTTAGTTAGTTCTGGTACAA+AGG + chr1.1:47862788-47862807 None:intergenic 35.0%
!! GTCAAGAACTGAATTTTTGG+AGG - chr1.1:47863388-47863407 MS.gene051449:intron 35.0%
!! GTGTGAGAGTATCATTATCT+TGG + chr1.1:47864792-47864811 None:intergenic 35.0%
!! GTTCGAAGATAGGAGTATTA+AGG + chr1.1:47866508-47866527 None:intergenic 35.0%
!! TTGCCTTGTTTACCAAAAGT+TGG + chr1.1:47863100-47863119 None:intergenic 35.0%
AAAACTATTGGGGAGCTAGT+CGG - chr1.1:47862139-47862158 MS.gene051449:intron 40.0%
AAGATAACAACTATGGACCG+TGG - chr1.1:47862194-47862213 MS.gene051449:intron 40.0%
AAGATTCTGACAACATGGTG+GGG - chr1.1:47862983-47863002 MS.gene051449:intron 40.0%
AAGGAATCAACTGGATGTCA+TGG - chr1.1:47866039-47866058 MS.gene051449:intron 40.0%
AAGGGCAATGGAGGAAAAAT+TGG - chr1.1:47864120-47864139 MS.gene051449:CDS 40.0%
AATCGTCCGCAAACAAAAGA+TGG + chr1.1:47865569-47865588 None:intergenic 40.0%
AATTCTTCTGGCAGACTTTC+TGG + chr1.1:47866386-47866405 None:intergenic 40.0%
ACAACTCATTTCTTCTGGCA+GGG + chr1.1:47863543-47863562 None:intergenic 40.0%
ACCTCCAAAGGAATTGTTCT+CGG + chr1.1:47862448-47862467 None:intergenic 40.0%
ACTTGAAAGAGTTCGAACTC+AGG - chr1.1:47864465-47864484 MS.gene051449:intron 40.0%
AGACATTCTAACCTTCCTGT+TGG + chr1.1:47864184-47864203 None:intergenic 40.0%
AGCAAATGTTTGTCACAAGC+CGG - chr1.1:47865876-47865895 MS.gene051449:CDS 40.0%
AGCATTCACAAAAAGGAAGG+AGG - chr1.1:47866071-47866090 MS.gene051449:CDS 40.0%
AGCTAAAAGTAGTCAAGCTC+GGG - chr1.1:47865605-47865624 MS.gene051449:intron 40.0%
AGGAATCAACTGGATGTCAT+GGG - chr1.1:47866040-47866059 MS.gene051449:intron 40.0%
AGGTATGAACGGTATAGCTA+AGG - chr1.1:47864687-47864706 MS.gene051449:intron 40.0%
AGTTCAATGGAAGACAAAGC+TGG + chr1.1:47861806-47861825 None:intergenic 40.0%
ATAGAGTTTATGTCTGCAGC+TGG - chr1.1:47863161-47863180 MS.gene051449:intron 40.0%
ATATGTTTGGCGCAGCATTT+GGG - chr1.1:47866253-47866272 MS.gene051449:CDS 40.0%
ATCGTCCGCAAACAAAAGAT+GGG + chr1.1:47865568-47865587 None:intergenic 40.0%
ATGATTTCTTCCCAACAGGA+AGG - chr1.1:47864170-47864189 MS.gene051449:intron 40.0%
ATTGTGAAGAAGGTAGCCAT+GGG - chr1.1:47862037-47862056 MS.gene051449:intron 40.0%
CAAAAGTTTGGGTACGGTAA+GGG - chr1.1:47864102-47864121 MS.gene051449:CDS 40.0%
CAGACAAGCCAATTTAATGC+AGG - chr1.1:47862555-47862574 MS.gene051449:intron 40.0%
CATGGTGCAAATGTTCTCTA+AGG - chr1.1:47861958-47861977 MS.gene051449:intron 40.0%
CCGTATGATCATTGTGAAGA+AGG - chr1.1:47862027-47862046 MS.gene051449:intron 40.0%
CCTTGAATTGTTTCAGCGAA+AGG - chr1.1:47864717-47864736 MS.gene051449:intron 40.0%
CCTTTCGCTGAAACAATTCA+AGG + chr1.1:47864720-47864739 None:intergenic 40.0%
CTCTACTGAAATTTGGGTAC+AGG - chr1.1:47862087-47862106 MS.gene051449:intron 40.0%
CTGTTTAAGTACGAGAAGCT+GGG - chr1.1:47862313-47862332 MS.gene051449:intron 40.0%
CTTGAGTGTCAAAGGTCAAA+TGG - chr1.1:47862670-47862689 MS.gene051449:intron 40.0%
GAAGATGAAGTTGTTGCCAA+TGG - chr1.1:47861922-47861941 MS.gene051449:CDS 40.0%
GAAGATTCTGACAACATGGT+GGG - chr1.1:47862982-47863001 MS.gene051449:intron 40.0%
GAAGGACATATAGACCTACT+TGG - chr1.1:47863999-47864018 MS.gene051449:CDS 40.0%
GAATTGTTTCAGCGAAAGGA+TGG - chr1.1:47864721-47864740 MS.gene051449:intron 40.0%
GACATTCTAACCTTCCTGTT+GGG + chr1.1:47864183-47864202 None:intergenic 40.0%
GATCTTAACAATGTGCTGGA+AGG - chr1.1:47861983-47862002 MS.gene051449:intron 40.0%
GATGATTGGGTATCTCCTTT+CGG + chr1.1:47865015-47865034 None:intergenic 40.0%
GATTTCTTGGACTCAAAGGT+TGG - chr1.1:47866218-47866237 MS.gene051449:CDS 40.0%
GCAAATCTTTGCTCCACTTA+TGG + chr1.1:47865526-47865545 None:intergenic 40.0%
GCATAACAACGAGAAGTAAG+TGG - chr1.1:47863418-47863437 MS.gene051449:intron 40.0%
GCTGCAGACATAAACTCTAT+AGG + chr1.1:47863161-47863180 None:intergenic 40.0%
GGCGAGCAGTTAACAAAATT+AGG - chr1.1:47864644-47864663 MS.gene051449:intron 40.0%
GTAAGCTCGTTGAATTCTTC+TGG + chr1.1:47866398-47866417 None:intergenic 40.0%
GTCCTTATGTGACTCAGAAA+TGG - chr1.1:47864323-47864342 MS.gene051449:intron 40.0%
GTGGACCCAAAGGATTTAAA+TGG - chr1.1:47862721-47862740 MS.gene051449:intron 40.0%
GTGGTTCAAAAGTTTGGGTA+CGG - chr1.1:47864096-47864115 MS.gene051449:CDS 40.0%
GTGTGATTTCTTGGACTCAA+AGG - chr1.1:47866214-47866233 MS.gene051449:CDS 40.0%
GTTCACGTGGTTCAAAAGTT+TGG - chr1.1:47864090-47864109 MS.gene051449:CDS 40.0%
TAAAGGTAATGAAGGGGATG+TGG - chr1.1:47865227-47865246 MS.gene051449:intron 40.0%
TACAACTCATTTCTTCTGGC+AGG + chr1.1:47863544-47863563 None:intergenic 40.0%
TACGGTTATCCAATAACCAC+GGG + chr1.1:47862012-47862031 None:intergenic 40.0%
TATGTGACTCAGAAATGGGA+GGG - chr1.1:47864328-47864347 MS.gene051449:intron 40.0%
TCAAAAGTTTGGGTACGGTA+AGG - chr1.1:47864101-47864120 MS.gene051449:CDS 40.0%
TCACCACTACTCTTCCAATA+AGG + chr1.1:47861841-47861860 None:intergenic 40.0%
TCATTGTCGTGGTGTGTTAT+AGG - chr1.1:47863938-47863957 MS.gene051449:CDS 40.0%
TCCCATTTCTGAGTCACATA+AGG + chr1.1:47864328-47864347 None:intergenic 40.0%
TCGGGTCAGAGTTATTAATG+CGG - chr1.1:47864747-47864766 MS.gene051449:intron 40.0%
TCTTGGGTTCAAATAGACTG+TGG + chr1.1:47864775-47864794 None:intergenic 40.0%
TGAAAAGGTAAGGTGACAAC+GGG + chr1.1:47865449-47865468 None:intergenic 40.0%
TGAACTCATAGCCTTCCATA+TGG + chr1.1:47864075-47864094 None:intergenic 40.0%
TGAAGATTCTGACAACATGG+TGG - chr1.1:47862981-47863000 MS.gene051449:intron 40.0%
TGAATCCAAAAGGCAGTTGA+TGG + chr1.1:47862114-47862133 None:intergenic 40.0%
TGGTATGATTTCTTCCCAAC+AGG - chr1.1:47864166-47864185 MS.gene051449:intron 40.0%
TGGTCAGACTTAGTTAGTTC+TGG + chr1.1:47862796-47862815 None:intergenic 40.0%
TGTATTGCATGGAATTGTCG+GGG - chr1.1:47863560-47863579 MS.gene051449:intron 40.0%
TGTCAAAGGTCAAATGGTGA+GGG - chr1.1:47862676-47862695 MS.gene051449:intron 40.0%
TGTGGAGGAAGATAAACTCA+TGG - chr1.1:47865850-47865869 MS.gene051449:CDS 40.0%
TGTTGCTGGTCAGAAAAGAT+GGG - chr1.1:47862408-47862427 MS.gene051449:intron 40.0%
TTACATCCGGCTTATACATC+CGG + chr1.1:47863628-47863647 None:intergenic 40.0%
TTATGTGACTCAGAAATGGG+AGG - chr1.1:47864327-47864346 MS.gene051449:intron 40.0%
TTGTTGCTGGTCAGAAAAGA+TGG - chr1.1:47862407-47862426 MS.gene051449:intron 40.0%
TTTGGTGGGGTCATAACAAA+AGG - chr1.1:47866009-47866028 MS.gene051449:intron 40.0%
! AAAGAGGCTGCTTTCTCTAT+GGG - chr1.1:47864835-47864854 MS.gene051449:intron 40.0%
! AAGATTGGTCCAATTGTTCC+AGG - chr1.1:47865402-47865421 MS.gene051449:intron 40.0%
! ACTATCTGAGGAGCATAATG+GGG - chr1.1:47865295-47865314 MS.gene051449:intron 40.0%
! AGATGGGTTTCTGTTCGAAA+TGG - chr1.1:47865319-47865338 MS.gene051449:intron 40.0%
! CGATTGGTCATAGTTGCTTT+AGG + chr1.1:47864253-47864272 None:intergenic 40.0%
! CGGTTCAGGTATTTGAGATT+AGG + chr1.1:47863608-47863627 None:intergenic 40.0%
! CTAGTCATTGAAAGAAGTGC+TGG - chr1.1:47862274-47862293 MS.gene051449:intron 40.0%
! GACTATCTGAGGAGCATAAT+GGG - chr1.1:47865294-47865313 MS.gene051449:intron 40.0%
! GCTTGTAAGTTTGAGTGTTG+TGG + chr1.1:47862940-47862959 None:intergenic 40.0%
! GCTTTACAAGATAGTGGCAA+AGG - chr1.1:47865071-47865090 MS.gene051449:CDS 40.0%
! GCTTTTAATGAGGCTATGCT+TGG - chr1.1:47866116-47866135 MS.gene051449:CDS 40.0%
! TAAAGAGGCTGCTTTCTCTA+TGG - chr1.1:47864834-47864853 MS.gene051449:intron 40.0%
! TCAACTGCCTTTTGGATTCA+TGG - chr1.1:47862114-47862133 MS.gene051449:intron 40.0%
! TGACATCCAGTTGATTCCTT+TGG + chr1.1:47866039-47866058 None:intergenic 40.0%
! TGCTGATTAGGTTCGAAGAT+AGG + chr1.1:47866518-47866537 None:intergenic 40.0%
! TGGTGGAATTTAAGGTTGGA+GGG + chr1.1:47864978-47864997 None:intergenic 40.0%
! TGGTGTTAAGGTCTCTTTCT+CGG + chr1.1:47864597-47864616 None:intergenic 40.0%
! TTGGTGGAATTTAAGGTTGG+AGG + chr1.1:47864979-47864998 None:intergenic 40.0%
!! GCATTGTTTCTAGCAAAAGC+GGG + chr1.1:47864231-47864250 None:intergenic 40.0%
!! GCTAAAAGTGTTGTTAGTGC+AGG - chr1.1:47866278-47866297 MS.gene051449:CDS 40.0%
!! GGCATTGTTTCTAGCAAAAG+CGG + chr1.1:47864232-47864251 None:intergenic 40.0%
!! TACAAATGGAGCATTGGTTC+AGG - chr1.1:47866302-47866321 MS.gene051449:CDS 40.0%
!! TGCTTTTGTGTTGATCGAGA+AGG - chr1.1:47863719-47863738 MS.gene051449:intron 40.0%
AAATGTGGATGAGGCAGTCA+AGG - chr1.1:47865710-47865729 MS.gene051449:intron 45.0%
AACCTCATGTATTTCCGCCA+CGG + chr1.1:47862214-47862233 None:intergenic 45.0%
AAGCCTGGATTAAAGCCATC+CGG + chr1.1:47864880-47864899 None:intergenic 45.0%
AAGGTCAAATGGTGAGGGAA+TGG - chr1.1:47862681-47862700 MS.gene051449:intron 45.0%
AATCAGTCTGCCTTTGTGCT+CGG - chr1.1:47865141-47865160 MS.gene051449:CDS 45.0%
ACTGAATCTACCCAGAACAG+TGG - chr1.1:47863449-47863468 MS.gene051449:intron 45.0%
ATAACAACTATGGACCGTGG+CGG - chr1.1:47862197-47862216 MS.gene051449:intron 45.0%
ATAAGGAGGGGCCTAAAAAG+AGG - chr1.1:47863366-47863385 MS.gene051449:intron 45.0%
ATGCTGCGCCAAACATATCT+TGG + chr1.1:47866251-47866270 None:intergenic 45.0%
ATGGGAACAGGCAAATACCT+TGG - chr1.1:47865768-47865787 MS.gene051449:CDS 45.0%
ATGGGGAATGATATGTGTCC+AGG - chr1.1:47864853-47864872 MS.gene051449:intron 45.0%
ATGTGACTCAGAAATGGGAG+GGG - chr1.1:47864329-47864348 MS.gene051449:intron 45.0%
CAACTATGACCAATCGCAAC+AGG - chr1.1:47864257-47864276 MS.gene051449:intron 45.0%
CACAAAAAGGAAGGAGGTCT+TGG - chr1.1:47866077-47866096 MS.gene051449:CDS 45.0%
CATTGTGAAGAAGGTAGCCA+TGG - chr1.1:47862036-47862055 MS.gene051449:intron 45.0%
CGGAATAAGAGTGATGTTGG+TGG + chr1.1:47864995-47865014 None:intergenic 45.0%
CTACAGCAGAAATGTGGATG+AGG - chr1.1:47865701-47865720 MS.gene051449:intron 45.0%
CTACTCTTCCAATAAGGCAG+AGG + chr1.1:47861835-47861854 None:intergenic 45.0%
CTATGCTTGGTAAGCAAGCT+TGG - chr1.1:47866129-47866148 MS.gene051449:CDS 45.0%
CTCCATGCTCACATAACATG+CGG + chr1.1:47862858-47862877 None:intergenic 45.0%
CTTTCCTCAAACCTTTGGTG+CGG + chr1.1:47863220-47863239 None:intergenic 45.0%
GAAATACATGAGGTTACGGG+TGG - chr1.1:47862219-47862238 MS.gene051449:intron 45.0%
GAAGGAAGTGGAACCATAAG+TGG - chr1.1:47865510-47865529 MS.gene051449:intron 45.0%
GAATCGATTGGGACTATCTG+AGG - chr1.1:47865283-47865302 MS.gene051449:intron 45.0%
GAATGATATGTGTCCAGGAC+CGG - chr1.1:47864858-47864877 MS.gene051449:intron 45.0%
GAGTGTGGAAGTCAGAGAAA+TGG - chr1.1:47866546-47866565 MS.gene051449:CDS 45.0%
GAGTTCATGGGTAACGTCAA+TGG + chr1.1:47862070-47862089 None:intergenic 45.0%
GATATGTTTGGCGCAGCATT+TGG - chr1.1:47866252-47866271 MS.gene051449:CDS 45.0%
GATATTAATGTGGAGGGAGG+TGG - chr1.1:47862748-47862767 MS.gene051449:intron 45.0%
GCAAGTGGATAATAGATGGC+CGG - chr1.1:47862481-47862500 MS.gene051449:intron 45.0%
GCAGGATACAAATGGAGCAT+TGG - chr1.1:47866296-47866315 MS.gene051449:CDS 45.0%
GCATAGCCTCATTAAAAGCG+CGG + chr1.1:47866115-47866134 None:intergenic 45.0%
GCGGAAATACATGAGGTTAC+GGG - chr1.1:47862216-47862235 MS.gene051449:intron 45.0%
GCTAAAAGTAGTCAAGCTCG+GGG - chr1.1:47865606-47865625 MS.gene051449:intron 45.0%
GCTGTTTAAGTACGAGAAGC+TGG - chr1.1:47862312-47862331 MS.gene051449:intron 45.0%
GCTTCATTTGCGGATCCATT+GGG - chr1.1:47862344-47862363 MS.gene051449:intron 45.0%
GGAACACCAAAGGAATCAAC+TGG - chr1.1:47866030-47866049 MS.gene051449:intron 45.0%
GGCAGATCTTAACAATGTGC+TGG - chr1.1:47861979-47861998 MS.gene051449:intron 45.0%
GGCGGAAATACATGAGGTTA+CGG - chr1.1:47862215-47862234 MS.gene051449:intron 45.0%
GGGGTATAGCTATTCTTTGG+AGG - chr1.1:47863750-47863769 MS.gene051449:intron 45.0%
GTCACATAAGGACCAAACTC+AGG + chr1.1:47864316-47864335 None:intergenic 45.0%
GTCTCAAATTCTCAAGCACG+TGG - chr1.1:47863009-47863028 MS.gene051449:intron 45.0%
GTGGAAGGGACAAGCATTAA+CGG - chr1.1:47862528-47862547 MS.gene051449:intron 45.0%
GTGGTTCATCATCAAGCAAG+TGG - chr1.1:47862466-47862485 MS.gene051449:intron 45.0%
GTGTCAAAGGTCAAATGGTG+AGG - chr1.1:47862675-47862694 MS.gene051449:intron 45.0%
TATCCTTGCTCCACTGTTGA+AGG + chr1.1:47864402-47864421 None:intergenic 45.0%
TATGTGTATGGGACCAACGA+TGG - chr1.1:47866333-47866352 MS.gene051449:CDS 45.0%
TATGTTTGGCGCAGCATTTG+GGG - chr1.1:47866254-47866273 MS.gene051449:CDS 45.0%
TCAAATTCTCAAGCACGTGG+TGG - chr1.1:47863012-47863031 MS.gene051449:intron 45.0%
TCAACAAAAGGCTCTCACTC+TGG - chr1.1:47863265-47863284 MS.gene051449:intron 45.0%
TCACTTATTCGTCAAGCGGA+AGG - chr1.1:47865492-47865511 MS.gene051449:intron 45.0%
TCATATCTCACACTCGGTTC+TGG - chr1.1:47866432-47866451 MS.gene051449:CDS 45.0%
TCTGTTCGAAATGGTCAGAG+TGG - chr1.1:47865328-47865347 MS.gene051449:intron 45.0%
TGCTGGAGCATGGAAAAACT+TGG + chr1.1:47864617-47864636 None:intergenic 45.0%
TGCTTCATTTGCGGATCCAT+TGG - chr1.1:47862343-47862362 MS.gene051449:intron 45.0%
TGGGAACAGGCAAATACCTT+GGG - chr1.1:47865769-47865788 MS.gene051449:CDS 45.0%
TTAATGCTTGTCCCTTCCAC+CGG + chr1.1:47862528-47862547 None:intergenic 45.0%
TTCAGCGAAAGGATGGAGAT+CGG - chr1.1:47864728-47864747 MS.gene051449:intron 45.0%
TTGATCGAGAAGGTAGAGGA+GGG - chr1.1:47863729-47863748 MS.gene051449:intron 45.0%
TTGTGAAGGATAGAGTGTGG+AGG - chr1.1:47865835-47865854 MS.gene051449:CDS 45.0%
! AAACCTCCGCGCTTTTAATG+AGG - chr1.1:47866106-47866125 MS.gene051449:CDS 45.0%
! AAGAGGCTGCTTTCTCTATG+GGG - chr1.1:47864836-47864855 MS.gene051449:intron 45.0%
! AGGAGCATAATGGGGAAGAT+GGG - chr1.1:47865303-47865322 MS.gene051449:intron 45.0%
! ATGTTTCTATGGCTTTCCGG+AGG - chr1.1:47863862-47863881 MS.gene051449:CDS 45.0%
! CGGCCAACTTTTGGTAAACA+AGG - chr1.1:47863094-47863113 MS.gene051449:intron 45.0%
! CGTGCTTGAGAATTTGAGAC+CGG + chr1.1:47863009-47863028 None:intergenic 45.0%
! CTAGCTGAAGGTATGACAGA+GGG - chr1.1:47862829-47862848 MS.gene051449:intron 45.0%
! CTGCCTTATTGGAAGAGTAG+TGG - chr1.1:47861835-47861854 MS.gene051449:CDS 45.0%
! GAGAACAATTCCTTTGGAGG+TGG - chr1.1:47862447-47862466 MS.gene051449:intron 45.0%
! GAGGGGGTATAGCTATTCTT+TGG - chr1.1:47863747-47863766 MS.gene051449:intron 45.0%
! GCACTGGCCATGAAAGATTA+TGG + chr1.1:47863308-47863327 None:intergenic 45.0%
! GGACTATCTGAGGAGCATAA+TGG - chr1.1:47865293-47865312 MS.gene051449:intron 45.0%
! TAGCTGAAGGTATGACAGAG+GGG - chr1.1:47862830-47862849 MS.gene051449:intron 45.0%
! TGATGATGAACCACCTCCAA+AGG + chr1.1:47862460-47862479 None:intergenic 45.0%
! TGTGTTGATCGAGAAGGTAG+AGG - chr1.1:47863725-47863744 MS.gene051449:intron 45.0%
! TGTTTCTATGGCTTTCCGGA+GGG - chr1.1:47863863-47863882 MS.gene051449:CDS 45.0%
!! ACTCTTCTGTCGTGCTGATT+AGG + chr1.1:47866530-47866549 None:intergenic 45.0%
!! AGAGTGGATTATGATGTGCC+TGG - chr1.1:47865344-47865363 MS.gene051449:intron 45.0%
!! CACACTCGGTTCTGGAATAT+TGG - chr1.1:47866440-47866459 MS.gene051449:CDS 45.0%
!! GTCATTGAAAGAAGTGCTGG+TGG - chr1.1:47862277-47862296 MS.gene051449:intron 45.0%
AACCAAGGTGGGGATAAGGA+GGG - chr1.1:47863353-47863372 MS.gene051449:intron 50.0%
AAGGCAGACTGGGTAACATG+TGG - chr1.1:47861888-47861907 MS.gene051449:CDS 50.0%
AATCGACCTTCCGAGCACAA+AGG + chr1.1:47865154-47865173 None:intergenic 50.0%
ACTCAGAAATGGGAGGGGTA+TGG - chr1.1:47864334-47864353 MS.gene051449:intron 50.0%
ACTGGGTAACATGTGGTGTC+CGG - chr1.1:47861895-47861914 MS.gene051449:CDS 50.0%
ACTTATGCATGATCGGCGTG+TGG + chr1.1:47864360-47864379 None:intergenic 50.0%
AGACCACGACCTGGAACAAT+TGG + chr1.1:47865414-47865433 None:intergenic 50.0%
AGCGGATCAGTAACCAAGGT+GGG - chr1.1:47863342-47863361 MS.gene051449:intron 50.0%
ATACCTTGGGGTTCCTTCCA+TGG - chr1.1:47865782-47865801 MS.gene051449:CDS 50.0%
ATAGGGCTCTTGCTACTGAC+AGG - chr1.1:47864143-47864162 MS.gene051449:intron 50.0%
ATCAGCACGACAGAAGAGTG+TGG - chr1.1:47866531-47866550 MS.gene051449:CDS 50.0%
ATGGTGAGGGAATGGTGCAA+TGG - chr1.1:47862689-47862708 MS.gene051449:intron 50.0%
ATGTTTGGCGCAGCATTTGG+GGG - chr1.1:47866255-47866274 MS.gene051449:CDS 50.0%
ATTCGTCAAGCGGAAGGAAG+TGG - chr1.1:47865498-47865517 MS.gene051449:intron 50.0%
CAGAGTAGTCAACAGACTCC+AGG + chr1.1:47865365-47865384 None:intergenic 50.0%
CAGTAACCAAGGTGGGGATA+AGG - chr1.1:47863349-47863368 MS.gene051449:intron 50.0%
CCTCTGTCATACCTTCAGCT+AGG + chr1.1:47862831-47862850 None:intergenic 50.0%
CCTGAACCGGATGTATAAGC+CGG - chr1.1:47863619-47863638 MS.gene051449:CDS 50.0%
CGACTTCTTCCAACCATGGA+AGG + chr1.1:47865798-47865817 None:intergenic 50.0%
CGTCAATGGATCTTCTCCCA+TGG + chr1.1:47862056-47862075 None:intergenic 50.0%
CGTGCCGAGAACAATTCCTT+TGG - chr1.1:47862441-47862460 MS.gene051449:intron 50.0%
GAAGGGACAAGCATTAACGG+TGG - chr1.1:47862531-47862550 MS.gene051449:intron 50.0%
GACCGCATGTTATGTGAGCA+TGG - chr1.1:47862853-47862872 MS.gene051449:intron 50.0%
GAGCTAGTCGGCAGTCATAT+TGG - chr1.1:47862151-47862170 MS.gene051449:intron 50.0%
GAGGGAGGTGGAACTAGTAA+AGG - chr1.1:47862760-47862779 MS.gene051449:intron 50.0%
GAGGTAGGCATAGAGCTTCT+TGG - chr1.1:47863885-47863904 MS.gene051449:CDS 50.0%
GCCGAGAACAATTCCTTTGG+AGG - chr1.1:47862444-47862463 MS.gene051449:intron 50.0%
GGGAACAGGCAAATACCTTG+GGG - chr1.1:47865770-47865789 MS.gene051449:CDS 50.0%
GTCCACTTATCCACCATCGA+AGG - chr1.1:47861869-47861888 MS.gene051449:CDS 50.0%
GTTGATCGAGAAGGTAGAGG+AGG - chr1.1:47863728-47863747 MS.gene051449:intron 50.0%
TAACCAAGGTGGGGATAAGG+AGG - chr1.1:47863352-47863371 MS.gene051449:intron 50.0%
TACCAGCGGATCAGTAACCA+AGG - chr1.1:47863338-47863357 MS.gene051449:intron 50.0%
TCAGCGAAAGGATGGAGATC+GGG - chr1.1:47864729-47864748 MS.gene051449:intron 50.0%
TGATCGAGAAGGTAGAGGAG+GGG - chr1.1:47863730-47863749 MS.gene051449:intron 50.0%
TGGAAGGCTATGAGTTCACG+TGG - chr1.1:47864077-47864096 MS.gene051449:CDS 50.0%
TTCTCAAGCACGTGGTGGTA+TGG - chr1.1:47863017-47863036 MS.gene051449:intron 50.0%
TTGAACTTGAACGGAGACGG+AGG - chr1.1:47861770-47861789 MS.gene051449:CDS 50.0%
TTGGTTACTGATCCGCTGGT+AGG + chr1.1:47863339-47863358 None:intergenic 50.0%
TTTGGGTACGGTAAGGGCAA+TGG - chr1.1:47864108-47864127 MS.gene051449:CDS 50.0%
! AGCTGAAGGTATGACAGAGG+GGG - chr1.1:47862831-47862850 MS.gene051449:intron 50.0%
! CAGGTCCATCAACTGCCTTT+TGG - chr1.1:47862106-47862125 MS.gene051449:intron 50.0%
! CCTAGCTGAAGGTATGACAG+AGG - chr1.1:47862828-47862847 MS.gene051449:intron 50.0%
! GAGGAGCATAATGGGGAAGA+TGG - chr1.1:47865302-47865321 MS.gene051449:intron 50.0%
! TAGCCTCATTAAAAGCGCGG+AGG + chr1.1:47866112-47866131 None:intergenic 50.0%
!! TGCCTTCGATGGTGGATAAG+TGG + chr1.1:47861874-47861893 None:intergenic 50.0%
!! TGTGCTCGGAAGGTCGATTT+TGG - chr1.1:47865155-47865174 MS.gene051449:CDS 50.0%
!!! GAGTTGGTACGGCCAACTTT+TGG - chr1.1:47863085-47863104 MS.gene051449:intron 50.0%
AACAACGGGCGAAGACGCAT+TGG - chr1.1:47864569-47864588 MS.gene051449:intron 55.0%
ACCAAGGTGGGGATAAGGAG+GGG - chr1.1:47863354-47863373 MS.gene051449:intron 55.0%
AGTCTGCCTTTGTGCTCGGA+AGG - chr1.1:47865145-47865164 MS.gene051449:CDS 55.0%
ATCCACCATCGAAGGCAGAC+TGG - chr1.1:47861877-47861896 MS.gene051449:CDS 55.0%
ATGGGACCAACGATGGCTAG+TGG - chr1.1:47866340-47866359 MS.gene051449:CDS 55.0%
CAACCATGGAAGGAACCCCA+AGG + chr1.1:47865788-47865807 None:intergenic 55.0%
CACCATCCACTAGCCATCGT+TGG + chr1.1:47866349-47866368 None:intergenic 55.0%
CACCTTGGTTACTGATCCGC+TGG + chr1.1:47863343-47863362 None:intergenic 55.0%
CAGCGGATCAGTAACCAAGG+TGG - chr1.1:47863341-47863360 MS.gene051449:intron 55.0%
CATGCAGCTGTATCTGACGC+AGG - chr1.1:47864037-47864056 MS.gene051449:CDS 55.0%
CCAATCGCAACAGGCAGTTC+TGG - chr1.1:47864266-47864285 MS.gene051449:intron 55.0%
CCAGAACTGCCTGTTGCGAT+TGG + chr1.1:47864269-47864288 None:intergenic 55.0%
CCGGCTTATACATCCGGTTC+AGG + chr1.1:47863622-47863641 None:intergenic 55.0%
CGACCTTCAACAGTGGAGCA+AGG - chr1.1:47864396-47864415 MS.gene051449:intron 55.0%
CTGCTCGACCTCTGCCTTAT+TGG - chr1.1:47861824-47861843 MS.gene051449:CDS 55.0%
CTTGGGGTTCCTTCCATGGT+TGG - chr1.1:47865786-47865805 MS.gene051449:CDS 55.0%
CTTTCATGGCCAGTGCTCGT+GGG - chr1.1:47863312-47863331 MS.gene051449:intron 55.0%
GACCAACGATGGCTAGTGGA+TGG - chr1.1:47866344-47866363 MS.gene051449:CDS 55.0%
GATATGTGTCCAGGACCGGA+TGG - chr1.1:47864862-47864881 MS.gene051449:intron 55.0%
GATCGAGAAGGTAGAGGAGG+GGG - chr1.1:47863731-47863750 MS.gene051449:intron 55.0%
GCAGAGGTCGAGCAGTTCAA+TGG + chr1.1:47861819-47861838 None:intergenic 55.0%
GCATGGAATTGTCGGGGTGT+CGG - chr1.1:47863566-47863585 MS.gene051449:intron 55.0%
GCGGATCAGTAACCAAGGTG+GGG - chr1.1:47863343-47863362 MS.gene051449:intron 55.0%
GCTTGATGCGCCACTGTTCT+GGG + chr1.1:47863462-47863481 None:intergenic 55.0%
GGAAGGAAGCCCGTGGTTAT+TGG - chr1.1:47862000-47862019 MS.gene051449:intron 55.0%
GGATTAAAGCCATCCGGTCC+TGG + chr1.1:47864874-47864893 None:intergenic 55.0%
GGTCCAATTGTTCCAGGTCG+TGG - chr1.1:47865408-47865427 MS.gene051449:intron 55.0%
GGTGCGACTTCTTCCAACCA+TGG + chr1.1:47865802-47865821 None:intergenic 55.0%
GTGAGGGAATGGTGCAATGG+TGG - chr1.1:47862692-47862711 MS.gene051449:intron 55.0%
GTTACCCAGTCTGCCTTCGA+TGG + chr1.1:47861885-47861904 None:intergenic 55.0%
GTTACGGGTGGAGATTGCGT+TGG - chr1.1:47862231-47862250 MS.gene051449:intron 55.0%
TCCACCATCGAAGGCAGACT+GGG - chr1.1:47861878-47861897 MS.gene051449:CDS 55.0%
TCTTTCATGGCCAGTGCTCG+TGG - chr1.1:47863311-47863330 MS.gene051449:intron 55.0%
TGCTTGATGCGCCACTGTTC+TGG + chr1.1:47863463-47863482 None:intergenic 55.0%
TGTTTGGCGCAGCATTTGGG+GGG - chr1.1:47866256-47866275 MS.gene051449:CDS 55.0%
TTCTATGGCTTTCCGGAGGG+AGG - chr1.1:47863866-47863885 MS.gene051449:CDS 55.0%
TTGTTCCAGGTCGTGGTCTC+AGG - chr1.1:47865415-47865434 MS.gene051449:intron 55.0%
TTGTTCTCGGCACGCAAGTG+AGG + chr1.1:47862435-47862454 None:intergenic 55.0%
TTTGTTAACTGCTCGCCGCG+AGG + chr1.1:47864641-47864660 None:intergenic 55.0%
! CAACGATGGCTAGTGGATGG+TGG - chr1.1:47866347-47866366 MS.gene051449:CDS 55.0%
! GACCGTGGCGGAAATACATG+AGG - chr1.1:47862209-47862228 MS.gene051449:intron 55.0%
! GTGGACTGTTGTGGACCCAA+AGG - chr1.1:47862711-47862730 MS.gene051449:intron 55.0%
! TTCTGACAACATGGTGGGGC+CGG - chr1.1:47862987-47863006 MS.gene051449:intron 55.0%
!! AATGGCGGGTCCTGATGATC+AGG - chr1.1:47863517-47863536 MS.gene051449:intron 55.0%
!! GGACCGGATGGCTTTAATCC+AGG - chr1.1:47864874-47864893 MS.gene051449:intron 55.0%
!! GGTGCAATGGTGGACTGTTG+TGG - chr1.1:47862702-47862721 MS.gene051449:intron 55.0%
AACAATGCGGGCCGCACCAA+AGG - chr1.1:47863206-47863225 MS.gene051449:intron 60.0%
ACCCAGTCTGCCTTCGATGG+TGG + chr1.1:47861882-47861901 None:intergenic 60.0%
ACGGGTGGAGATTGCGTTGG+AGG - chr1.1:47862234-47862253 MS.gene051449:intron 60.0%
ATGGCTTTCCGGAGGGAGGT+AGG - chr1.1:47863870-47863889 MS.gene051449:CDS 60.0%
ATGTGCTGGAAGGAAGCCCG+TGG - chr1.1:47861993-47862012 MS.gene051449:intron 60.0%
GACCACCGGAATTGGAGCTC+CGG + chr1.1:47862503-47862522 None:intergenic 60.0%
GATGGCCGGAGCTCCAATTC+CGG - chr1.1:47862495-47862514 MS.gene051449:intron 60.0%
GCACGGTCGACCTTCAACAG+TGG - chr1.1:47864389-47864408 MS.gene051449:intron 60.0%
GCTCTATGCCTACCTCCCTC+CGG + chr1.1:47863881-47863900 None:intergenic 60.0%
GGAGCTCCAATTCCGGTGGT+CGG - chr1.1:47862502-47862521 MS.gene051449:intron 60.0%
GGGCTCTTGCTACTGACAGG+TGG - chr1.1:47864146-47864165 MS.gene051449:intron 60.0%
GGGTACGGTAAGGGCAATGG+AGG - chr1.1:47864111-47864130 MS.gene051449:CDS 60.0%
TCCATGCTCCAGCAACCTCG+CGG - chr1.1:47864623-47864642 MS.gene051449:intron 60.0%
TCTGGCAGGGCCTGATCATC+AGG + chr1.1:47863530-47863549 None:intergenic 60.0%
CCAGGTCGTGGTCTCAGGCA+AGG - chr1.1:47865420-47865439 MS.gene051449:intron 65.0%
CCTTGCCTGAGACCACGACC+TGG + chr1.1:47865423-47865442 None:intergenic 65.0%
CGGGCCGCACCAAAGGTTTG+AGG - chr1.1:47863213-47863232 MS.gene051449:intron 65.0%
CTCCAATTCCGGTGGTCGGC+CGG - chr1.1:47862506-47862525 MS.gene051449:intron 65.0%
CTGGTAGGACCCACGAGCAC+TGG + chr1.1:47863324-47863343 None:intergenic 65.0%
GCCCCTCCTTATCCCCACCT+TGG + chr1.1:47863358-47863377 None:intergenic 65.0%
GTGCTCGTGGGTCCTACCAG+CGG - chr1.1:47863324-47863343 MS.gene051449:intron 65.0%
ACTGCTCGCCGCGAGGTTGC+TGG + chr1.1:47864634-47864653 None:intergenic 70.0%
CAATTCCGGTGGTCGGCCGG+TGG - chr1.1:47862509-47862528 MS.gene051449:intron 70.0%
CACCGGCCGACCACCGGAAT+TGG + chr1.1:47862511-47862530 None:intergenic 70.0%
GCCGCGAGGTTGCTGGAGCA+TGG + chr1.1:47864627-47864646 None:intergenic 70.0%
GGCCGGAGCTCCAATTCCGG+TGG - chr1.1:47862498-47862517 MS.gene051449:intron 70.0%
CCCTTCCACCGGCCGACCAC+CGG + chr1.1:47862517-47862536 None:intergenic 75.0%
CCGGTGGTCGGCCGGTGGAA+GGG - chr1.1:47862514-47862533 MS.gene051449:intron 75.0%
TCCGGTGGTCGGCCGGTGGA+AGG - chr1.1:47862513-47862532 MS.gene051449:intron 75.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 47861761 47866583 47861761 ID=MS.gene051449
chr1.1 mRNA 47861761 47866583 47861761 ID=MS.gene051449.t1;Parent=MS.gene051449
chr1.1 exon 47866049 47866583 47866049 ID=MS.gene051449.t1.exon1;Parent=MS.gene051449.t1
chr1.1 CDS 47866049 47866583 47866049 ID=cds.MS.gene051449.t1;Parent=MS.gene051449.t1
chr1.1 exon 47865768 47865923 47865768 ID=MS.gene051449.t1.exon2;Parent=MS.gene051449.t1
chr1.1 CDS 47865768 47865923 47865768 ID=cds.MS.gene051449.t1;Parent=MS.gene051449.t1
chr1.1 exon 47865054 47865179 47865054 ID=MS.gene051449.t1.exon3;Parent=MS.gene051449.t1
chr1.1 CDS 47865054 47865179 47865054 ID=cds.MS.gene051449.t1;Parent=MS.gene051449.t1
chr1.1 exon 47863858 47864156 47863858 ID=MS.gene051449.t1.exon4;Parent=MS.gene051449.t1
chr1.1 CDS 47863858 47864156 47863858 ID=cds.MS.gene051449.t1;Parent=MS.gene051449.t1
chr1.1 exon 47863594 47863671 47863594 ID=MS.gene051449.t1.exon5;Parent=MS.gene051449.t1
chr1.1 CDS 47863594 47863671 47863594 ID=cds.MS.gene051449.t1;Parent=MS.gene051449.t1
chr1.1 exon 47861761 47861964 47861761 ID=MS.gene051449.t1.exon6;Parent=MS.gene051449.t1
chr1.1 CDS 47861761 47861964 47861761 ID=cds.MS.gene051449.t1;Parent=MS.gene051449.t1
Gene Sequence

>MS.gene051449

ATGGAAAATTTGAACTTGAACGGAGACGGAGGAGTGAATCAACCAGCTTTGTCTTCCATTGAACTGCTCGACCTCTGCCTTATTGGAAGAGTAGTGGTGAACAAAACTGTCCACTTATCCACCATCGAAGGCAGACTGGGTAACATGTGGTGTCCGGTGATGAAGATGAAGTTGTTGCCAATGGATGATAACAAATTCATGGTGCAAATGTTCTCTAAGGCAGATCTTAACAATGTGCTGGAAGGAAGCCCGTGGTTATTGGATAACCGTATGATCATTGTGAAGAAGGTAGCCATGGGAGAAGATCCATTGACGTTACCCATGAACTCTACTGAAATTTGGGTACAGGTCCATCAACTGCCTTTTGGATTCATGGACAAAACTATTGGGGAGCTAGTCGGCAGTCATATTGGCGAACTAGTTAAATATGACGAAGATAACAACTATGGACCGTGGCGGAAATACATGAGGTTACGGGTGGAGATTGCGTTGGAGGAACCCCTTCAACAAGATCTAGTCATTGAAAGAAGTGCTGGTGGAAACATCAGACTGCTGTTTAAGTACGAGAAGCTGGGAAAATTCTGCTTCATTTGCGGATCCATTGGGCATACAGATAATTTTTGTCAGAAAAAATTTGAAACAAATTTTGTTGCTGGTCAGAAAAGATGGGACCTCACTTGCGTGCCGAGAACAATTCCTTTGGAGGTGGTTCATCATCAAGCAAGTGGATAATAGATGGCCGGAGCTCCAATTCCGGTGGTCGGCCGGTGGAAGGGACAAGCATTAACGGTGGTCAGACAAGCCAATTTAATGCAGGTAACAATTGCGGTATTTCAAATCATCGGTTTTATGGCAGAATTAAAGTTGAAATTGAACTCTTGTCTAGGAGTTTAATTATTTATAAATACTCTTGAGTGTCAAAGGTCAAATGGTGAGGGAATGGTGCAATGGTGGACTGTTGTGGACCCAAAGGATTTAAATGGCAAAGATATTAATGTGGAGGGAGGTGGAACTAGTAAAGGTCCCTTTGTACCAGAACTAACTAAGTCTGACCAAATAAATAAATTCCTAGCTGAAGGTATGACAGAGGGGGACCGCATGTTATGTGAGCATGGAGAAAAATCTATGTTATTGTTAAGAAAGGAAAGAATAGGGGGAAGCTACAAAAACGTGAGTCCACAACACTCAAACTTACAAGCTTATTTTGAGAAAAACTTGAATGAAGATTCTGACAACATGGTGGGGCCGGTCTCAAATTCTCAAGCACGTGGTGGTATGGCTTTTGTAGAGTCATCAGCTTTTCAAGTGAGCAAAAACAATTTAGGAGTTGGTACGGCCAACTTTTGGTAAACAAGGCAATTACTTCTCAATCTTTAGCTATGTCTCCTATTTTAATGCCTATAGAGTTTATGTCTGCAGCTGGTTCTTTAGTGAATGAAAAAACAAACAATGCGGGCCGCACCAAAGGTTTGAGGAAAGATAAAATGGCAGCTAACAAAGCAAGTCAACAAAAGGCTCTCACTCTGGCACGTAATCCAATACAACCATAATCTTTCATGGCCAGTGCTCGTGGGTCCTACCAGCGGATCAGTAACCAAGGTGGGGATAAGGAGGGGCCTAAAAAGAGGTCAAGAACTGAATTTTTGGAGGAAGTGAAGCATAACAACGAGAAGTAAGTGGAGAATGCAACTGAATCTACCCAGAACAGTGGCGCATCAAGCACTGTTCATGTTAATCCTCTCTTTGATGCTAATGTAATGGCGGGTCCTGATGATCAGGCCCTGCCAGAAGAAATGAGTTGTATTGCATGGAATTGTCGGGGTGTCGGTAGCCCGAGTACAATTCCTAATCTCAAATACCTGAACCGGATGTATAAGCCGGATGTAATAATAATTTTTGAGACTCTTTGTCTTTCTAATAAAATTGAGGAGTTAAAATATATCTTGAGCCTTGATTCTTGCTTTTGTGTTGATCGAGAAGGTAGAGGAGGGGGTATAGCTATTCTTTGGAGGAACTCTATTAATTGTAACATCACAAATTACTCACAAAATCATGTGGATCTTGAAGGTAAAGATAATCAGAAAGGAACGTGGAGATTAACATGTTTCTATGGCTTTCCGGAGGGAGGTAGGCATAGAGCTTCTTGGAACTTCCTAAGAAATTTAGCAAGATTATCATCATTGTCGTGGTGTGTTATAGGAGATTTCAACGACATTCTTCATGTTTCAGAAAAGAAAGGAAGGACATATAGACCTACTTGGTTAATCAATGGTTTTCATGCAGCTGTATCTGACGCAGGATTGATTGATATCCATATGGAAGGCTATGAGTTCACGTGGTTCAAAAGTTTGGGTACGGTAAGGGCAATGGAGGAAAAATTGGATAGGGCTCTTGCTACTGACAGGTGGTATGATTTCTTCCCAACAGGAAGGTTAGAATGTCTTACTACTACAGCTTCAGATCACTACCCGCTTTTGCTAGAAACAATGCCTAAAGCAACTATGACCAATCGCAACAGGCAGTTCTGGTTTGAAAATGCTTGGTTAATTGAACCTGAGTTTGGTCCTTATGTGACTCAGAAATGGGAGGGGTATGGCCACACGCCGATCATGCATAAGTTAGAGAATTGCACGGTCGACCTTCAACAGTGGAGCAAGGATAATTGTCAACCAATAAGGAAAGAAATTGAAAATTGCAGGAAGACACTTGAAAGAGTTCGAACTCAGGTGTGTTCCTCAAACATCAATTATTTTAATGCTCTGAGGCGAAGACTCGACACTTTGCTTGTTAAAGATGATGTTTTTTGGAAACAACGGGCGAAGACGCATTGGTACCGAGAAAGAGACCTTAACACCAAGTTTTTCCATGCTCCAGCAACCTCGCGGCGAGCAGTTAACAAAATTAGGGTTAAGTGCACTTCTATAGAAGGTATGAACGGTATAGCTAAGGAGTATTTCCTTGAATTGTTTCAGCGAAAGGATGGAGATCGGGTCAGAGTTATTAATGCGGTTCCACAGTCTATTTGAACCCAAGATAATGATACTCTCACACGGCCGTTTTCTGTTGAAGAGTTTAAAGAGGCTGCTTTCTCTATGGGGAATGATATGTGTCCAGGACCGGATGGCTTTAATCCAGGCTTCTTTAAAAGTTTTTGGAGTAGTTGCGGTACAGATATTTTTTAGGCTGCTTGTTTTTGGTTAGAAAATGGTTCTTTCCCTCCAACCTTAAATTCCACCAACATCACTCTTATTCCGAAAGGAGATACCCAATCATCTATGAAAGATTGGAGACCGATTGCTTTGTGTAATGTGCTTTACAAGATAGTGGCAAAGGTTCTTGCTAACAGATTAAAGGTAGTGCTCTCTAAATGTATATCTGAGAATCAGTCTGCCTTTGTGCTCGGAAGGTCGATTTTGGATAATGCTTTAACTGCTATTGGGATAGTTCATTACATGCAATGCAAGACTAAAGGTAATGAAGGGGATGTGGCTTTGAAATTAGACATAAGCAAGGCTTATGATAGAATCGATTGGGACTATCTGAGGAGCATAATGGGGAAGATGGGTTTCTGTTCGAAATGGTCAGAGTGGATTATGATGTGCCTGGAGTCTGTTGACTACTCTGTTATATTAAATGGTGAAAAGATTGGTCCAATTGTTCCAGGTCGTGGTCTCAGGCAAGGAGACCCGTTGTCACCTTACCTTTTCATCATTTGTGCGAAAGGGCTTTCATCACTTATTCGTCAAGCGGAAGGAAGTGGAACCATAAGTGGAGCAAAGATTTGCAAGAATGCACCAATCATATCCCATCTTTTGTTTGCGGACGATTGTTTCATGTTCTTCAAAGCTAAAAGTAGTCAAGCTCGGGGTATGAAAAATATATTACAAATGTATGAAAGTGCTTCTGGCCAGTCTATAAACTTTCAGAAGTCCGAAGTTTTCTACAGCAGAAATGTGGATGAGGCAGTCAAGGCCTCTATTTCCCAAATCTTAGAAGTTCAACAGGTTATGGGAACAGGCAAATACCTTGGGGTTCCTTCCATGGTTGGAAGAAGTCGCACCTCTACTTTCAAATTTGTGAAGGATAGAGTGTGGAGGAAGATAAACTCATGGAGCAGCAAATGTTTGTCACAAGCCGGTCGAGAAACACTAATCAAATCGGTCTTGCAGTCAATACCTTCGTATATCATGAGTATCTTTGCTATCCCTAAATCCATTATTGTTGATATAGAGAAAATGTTGAACTCATTTTGGTGGGGTCATAACAAAAGGAACACCAAAGGAATCAACTGGATGTCATGGGAAAGACTTAGCATTCACAAAAAGGAAGGAGGTCTTGGTTTTAAAAACCTCCGCGCTTTTAATGAGGCTATGCTTGGTAAGCAAGCTTGGAAATTCATGACAGAACCGCATAACATTGTCACTAGATTGTCCAAAGCAAAATACTTTAACAAGTGTGATTTCTTGGACTCAAAGGTTGGTCATAATCCAAGATATGTTTGGCGCAGCATTTGGGGGGCTAAAAGTGTTGTTAGTGCAGGATACAAATGGAGCATTGGTTCAGGTAATGATATATGTGTATGGGACCAACGATGGCTAGTGGATGGTGGTGTTTTACAGAAGCCAGAAAGTCTGCCAGAAGAATTCAACGAGCTTACTGTTTCAGATCTTTTCATATCTCACACTCGGTTCTGGAATATTGGTTTATTGAGGAACCTTGTTAGCAACGAAGATACTAATCGCATCCTTAATACTCCTATCTTCGAACCTAATCAGCACGACAGAAGAGTGTGGAAGTCAGAGAAATGGTATCTATTCCGTTAG
Protein sequence

>MS.gene051449.t1

MENLNLNGDGGVNQPALSSIELLDLCLIGRVVVNKTVHLSTIEGRLGNMWCPVMKMKLLPMDDNKFMVQMFSKADLNNVLEGSPWLLDNRMIIVKKVAMGEDPLTLPMNSTEIWVQVHQLPFGFMDKTIGELVGSHIGELVKYDEDNNYGPWRKYMRLRVEIALEEPLQQDLVIERSAEKMGPHLRAENNSFGGGSSSSKWIIDGRSSNSGGRPVEGTSINGGQTSQFNAEFMSAAGSLVNEKTNNAGRTKGLRKDKMAANKASQQKALTLARRLECLTTTASDHYPLLLETMPKATMTNRNRQFWFENAWLIEPEFGPYVTQKWEGYGHTPIMHKLENCTVDLQQWSKDNCQPIRKEIENCRKTLERVRTQCTSIEGMNGIAKEYFLELFQRKDGDRKPESLPEEFNELTVSDLFISHTRFWNIGLLRNLVSNEDTNRILNTPIFEPNQHDRRVWKSEKWYLFR