Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41979.t1 | AES70414.1 | 55.5 | 346 | 70 | 4 | 1 | 328 | 1 | 280 | 8.40E-94 | 354.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41979.t1 | O04244 | 25.7 | 136 | 97 | 2 | 83 | 216 | 6 | 139 | 3.6e-08 | 61.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41979.t1 | G7J017 | 55.5 | 346 | 70 | 4 | 1 | 328 | 1 | 280 | 6.1e-94 | 354.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41979.t1 | MTR_3g053920 | 53.179 | 346 | 78 | 4 | 1 | 328 | 1 | 280 | 9.45e-116 | 342 |
| MS.gene41979.t1 | MTR_2g061500 | 82.946 | 129 | 22 | 0 | 1 | 129 | 1 | 129 | 8.13e-73 | 226 |
| MS.gene41979.t1 | MTR_4g103530 | 83.871 | 93 | 15 | 0 | 55 | 147 | 1 | 93 | 4.03e-51 | 172 |
| MS.gene41979.t1 | MTR_4g103530 | 65.625 | 64 | 22 | 0 | 251 | 314 | 119 | 182 | 3.63e-20 | 88.6 |
| MS.gene41979.t1 | MTR_7g011710 | 67.045 | 88 | 29 | 0 | 55 | 142 | 1 | 88 | 1.06e-34 | 127 |
| MS.gene41979.t1 | MTR_0010s0370 | 36.158 | 177 | 105 | 4 | 7 | 177 | 3 | 177 | 1.13e-29 | 115 |
| MS.gene41979.t1 | MTR_0010s0350 | 36.158 | 177 | 105 | 4 | 7 | 177 | 3 | 177 | 1.13e-29 | 115 |
| MS.gene41979.t1 | MTR_6g033215 | 32.749 | 171 | 113 | 1 | 31 | 199 | 124 | 294 | 9.56e-29 | 115 |
| MS.gene41979.t1 | MTR_8g463110 | 51.220 | 123 | 39 | 3 | 289 | 392 | 1 | 121 | 4.40e-22 | 100 |
| MS.gene41979.t1 | MTR_8g463110 | 42.500 | 120 | 25 | 2 | 398 | 478 | 210 | 324 | 1.40e-20 | 95.5 |
| MS.gene41979.t1 | MTR_4g020630 | 37.168 | 113 | 32 | 1 | 405 | 478 | 148 | 260 | 1.43e-16 | 82.4 |
| MS.gene41979.t1 | MTR_1g036720 | 34.862 | 109 | 69 | 1 | 7 | 113 | 3 | 111 | 3.56e-14 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41979.t1 | AT2G17920 | 26.606 | 218 | 144 | 6 | 8 | 216 | 9 | 219 | 1.83e-16 | 80.5 |
| MS.gene41979.t1 | AT3G57587 | 28.169 | 142 | 98 | 2 | 77 | 216 | 80 | 219 | 8.37e-15 | 76.3 |
| MS.gene41979.t1 | AT2G41590 | 28.659 | 164 | 106 | 4 | 61 | 216 | 59 | 219 | 1.72e-14 | 75.5 |
| MS.gene41979.t1 | AT5G36228 | 27.848 | 158 | 107 | 3 | 75 | 227 | 78 | 233 | 5.59e-14 | 73.6 |
| MS.gene41979.t1 | AT3G31430 | 27.895 | 190 | 129 | 4 | 30 | 215 | 126 | 311 | 1.14e-12 | 69.3 |
Find 129 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGCTGCTGATGGGGATA+TGG | 0.197944 | 6.4:+18032881 | MS.gene41979:CDS |
| AGCATTCGATCATTAAAATT+TGG | 0.204462 | 6.4:-18032567 | None:intergenic |
| CAAGGTCTAGGAAGCTTTCT+AGG | 0.220477 | 6.4:+18032138 | MS.gene41979:CDS |
| CCCTGTGGTGCTTGGCTTAC+CGG | 0.225590 | 6.4:+18032749 | MS.gene41979:CDS |
| TGTCACTGTCCCTTTGAAAA+AGG | 0.255154 | 6.4:+18032230 | MS.gene41979:CDS |
| GACATACGACTGCAAGCTTC+TGG | 0.257798 | 6.4:+18033947 | MS.gene41979:CDS |
| CTGATGATGGTGTTCGGAAC+TGG | 0.260825 | 6.4:+18032388 | MS.gene41979:CDS |
| AACCCATTTGACTGGCTTCC+AGG | 0.277004 | 6.4:-18031893 | None:intergenic |
| GCAGTTAGAGCCGGGGTTTA+AGG | 0.284542 | 6.4:+18033778 | MS.gene41979:CDS |
| CGACATGCGTTCACTGAAAT+AGG | 0.310167 | 6.4:-18031866 | None:intergenic |
| GCCGCCAGTAGGCATCTTCT+TGG | 0.315472 | 6.4:-18034024 | None:intergenic |
| GTCTCTTCATTTGCTGCTGA+TGG | 0.329886 | 6.4:+18032873 | MS.gene41979:CDS |
| TCCTAGACCTTGACCTACTT+TGG | 0.331729 | 6.4:-18032127 | None:intergenic |
| CCTAGACCTTGACCTACTTT+GGG | 0.343147 | 6.4:-18032126 | None:intergenic |
| TTCTTCTTCAACAGGGAATT+CGG | 0.357602 | 6.4:+18032704 | MS.gene41979:intron |
| CAAGTGCATGGGCTGCCTTT+TGG | 0.370854 | 6.4:+18032093 | MS.gene41979:CDS |
| TCGAGGATGGCAGTAGGTTC+AGG | 0.380717 | 6.4:-18031796 | None:intergenic |
| CCTCAACGCCCTGTGGTGCT+TGG | 0.382334 | 6.4:+18032741 | MS.gene41979:CDS |
| CCCTCAAACCTCAACCTTGA+TGG | 0.382465 | 6.4:+18031727 | MS.gene41979:CDS |
| TCTCTTCATTTGCTGCTGAT+GGG | 0.390245 | 6.4:+18032874 | MS.gene41979:CDS |
| CACTTTAAGTATGAAAAGTT+AGG | 0.399392 | 6.4:+18032294 | MS.gene41979:CDS |
| GCCGGTAAGCCAAGCACCAC+AGG | 0.403511 | 6.4:-18032750 | None:intergenic |
| GATATGGGAAATGATGTAAT+AGG | 0.410277 | 6.4:+18032897 | MS.gene41979:CDS |
| TCTCACAGGTGTGGACTGAT+TGG | 0.413327 | 6.4:+18032324 | MS.gene41979:CDS |
| GTGCCCGGAGCTATATGAAT+TGG | 0.418657 | 6.4:+18032362 | MS.gene41979:CDS |
| ATCCTCGAAAACTGCTTGAT+TGG | 0.418674 | 6.4:+18031811 | MS.gene41979:CDS |
| GCGTTGAGGCAGCAAGTTAG+AGG | 0.419673 | 6.4:-18032727 | None:intergenic |
| TGCGGCACAGTGGCAGGAAT+AGG | 0.425738 | 6.4:-18032477 | None:intergenic |
| GCGGCACAGTGGCAGGAATA+GGG | 0.427313 | 6.4:-18032476 | None:intergenic |
| CCATCAAGGTTGAGGTTTGA+GGG | 0.429032 | 6.4:-18031727 | None:intergenic |
| ACAAAGTTGGGCACGACACC+AGG | 0.430609 | 6.4:-18032042 | None:intergenic |
| GCAGCTGCACCAGTCGCGTT+AGG | 0.436191 | 6.4:-18032534 | None:intergenic |
| GTGAACGCATGTCGCGTGCC+TGG | 0.436752 | 6.4:+18031875 | MS.gene41979:CDS |
| GCCATCAAGGTTGAGGTTTG+AGG | 0.448490 | 6.4:-18031728 | None:intergenic |
| GTGCCTGGAAGCCAGTCAAA+TGG | 0.453517 | 6.4:+18031890 | MS.gene41979:CDS |
| TGATTCAGAGGCACAAAGTT+GGG | 0.454446 | 6.4:-18032054 | None:intergenic |
| TTTGCTGCTGATGGGGATAT+GGG | 0.456675 | 6.4:+18032882 | MS.gene41979:CDS |
| CCGCCAGTAGGCATCTTCTT+GGG | 0.460518 | 6.4:-18034023 | None:intergenic |
| CTGCTTGATTGGTCGTGTCT+TGG | 0.467464 | 6.4:+18031822 | MS.gene41979:CDS |
| GACGAATCACATGATGATTC+TGG | 0.469092 | 6.4:+18032798 | MS.gene41979:CDS |
| ACATACGACTGCAAGCTTCT+GGG | 0.471194 | 6.4:+18033948 | MS.gene41979:CDS |
| GCAACCCGTGTCCTTGATGA+AGG | 0.471440 | 6.4:+18031973 | MS.gene41979:CDS |
| TCACATGATGATTCTGGTGC+TGG | 0.482110 | 6.4:+18032804 | MS.gene41979:CDS |
| CTCTTCATTTGCTGCTGATG+GGG | 0.484467 | 6.4:+18032875 | MS.gene41979:CDS |
| GGCTTGACTTTGTCTGAAGA+GGG | 0.489013 | 6.4:+18031748 | MS.gene41979:CDS |
| AATGCTTGGCAGTTAGAGCC+GGG | 0.492362 | 6.4:+18033770 | MS.gene41979:CDS |
| GAGTCCAATTCATATAGCTC+CGG | 0.492379 | 6.4:-18032366 | None:intergenic |
| GTACCAACACGTTGAGCAGC+AGG | 0.492954 | 6.4:-18032426 | None:intergenic |
| CCGGGCACACCTTATCTGTA+TGG | 0.493979 | 6.4:-18032347 | None:intergenic |
| TGATGATGGTGTTCGGAACT+GGG | 0.494621 | 6.4:+18032389 | MS.gene41979:CDS |
| CAAAGGGACAGTGACATCAA+TGG | 0.496314 | 6.4:-18032223 | None:intergenic |
| AAATGCTTGGCAGTTAGAGC+CGG | 0.498758 | 6.4:+18033769 | MS.gene41979:CDS |
| GTTGAGGTTTGAGGGATCCA+TGG | 0.500518 | 6.4:-18031719 | None:intergenic |
| TTGGGTTGAATGAAACCAAA+AGG | 0.500604 | 6.4:-18032108 | None:intergenic |
| TGGCTTGACTTTGTCTGAAG+AGG | 0.501031 | 6.4:+18031747 | MS.gene41979:CDS |
| TTTGCTGCTCCTAACGCGAC+TGG | 0.504507 | 6.4:+18032525 | MS.gene41979:CDS |
| AGAATGAAGGCCCTTGAGAA+TGG | 0.507399 | 6.4:+18032849 | MS.gene41979:CDS |
| CAGGTACGGTTTCGAGATTG+AGG | 0.507725 | 6.4:-18031777 | None:intergenic |
| GTGATTCAGAGGCACAAAGT+TGG | 0.511667 | 6.4:-18032055 | None:intergenic |
| TGATAACTTTCATATTGCTA+TGG | 0.512447 | 6.4:+18032008 | MS.gene41979:CDS |
| CAGACAAAGTCAAGCCATCA+AGG | 0.513055 | 6.4:-18031741 | None:intergenic |
| GTTCACTGAAATAGGCAAAC+TGG | 0.513510 | 6.4:-18031858 | None:intergenic |
| GGTTTCATTCAACCCAAAGT+AGG | 0.516836 | 6.4:+18032114 | MS.gene41979:CDS |
| AAATGTTTAGCAGAATGAAA+TGG | 0.518475 | 6.4:-18033737 | None:intergenic |
| TGGCGTGTCCGCGCTAGTAA+TGG | 0.522611 | 6.4:+18032255 | MS.gene41979:CDS |
| AAGTCAAGCCATCAAGGTTG+AGG | 0.523037 | 6.4:-18031735 | None:intergenic |
| GTGATCGTAACCCATTTGAC+TGG | 0.532470 | 6.4:-18031901 | None:intergenic |
| AGTCCAATTCATATAGCTCC+GGG | 0.533353 | 6.4:-18032365 | None:intergenic |
| TGCCTGGAAGCCAGTCAAAT+GGG | 0.533399 | 6.4:+18031891 | MS.gene41979:CDS |
| TCAGATCAATAATGCGTGCT+TGG | 0.536503 | 6.4:-18033976 | None:intergenic |
| CCATACAGATAAGGTGTGCC+CGG | 0.538377 | 6.4:+18032347 | MS.gene41979:CDS |
| TGTCCCAAGAAGATGCCTAC+TGG | 0.541263 | 6.4:+18034020 | MS.gene41979:CDS |
| AGGTACGGTTTCGAGATTGA+GGG | 0.543570 | 6.4:-18031776 | None:intergenic |
| TGGACTCTGATGATGGTGTT+CGG | 0.552516 | 6.4:+18032382 | MS.gene41979:CDS |
| TAGCGCTTATATGTGCATCA+AGG | 0.554480 | 6.4:+18032197 | MS.gene41979:CDS |
| GAAGAAGAGGAAAAGAATGA+AGG | 0.555634 | 6.4:+18032836 | MS.gene41979:CDS |
| TTTGTTTCAGTTCCATCACA+AGG | 0.559337 | 6.4:+18031945 | MS.gene41979:CDS |
| CATCAAAACAATTCAGCTGA+TGG | 0.562352 | 6.4:+18032498 | MS.gene41979:CDS |
| GCTGCCACTTTCATACATGT+TGG | 0.562691 | 6.4:+18032771 | MS.gene41979:CDS |
| TGATGATTCTGGTGCTGGAT+CGG | 0.564352 | 6.4:+18032809 | MS.gene41979:CDS |
| TTGAGGTTTGAGGGATCCAT+GGG | 0.564403 | 6.4:-18031718 | None:intergenic |
| AAACCTGCTGCTCAACGTGT+TGG | 0.564416 | 6.4:+18032423 | MS.gene41979:CDS |
| TATGAATTGGACTCTGATGA+TGG | 0.564909 | 6.4:+18032375 | MS.gene41979:CDS |
| CCCAAAGTAGGTCAAGGTCT+AGG | 0.565295 | 6.4:+18032126 | MS.gene41979:CDS |
| GGAAATGATGTTAGCCATGG+GGG | 0.569264 | 6.4:+18032918 | MS.gene41979:CDS |
| GCATCCAACATGTATGAAAG+TGG | 0.569537 | 6.4:-18032775 | None:intergenic |
| ATCTGAGGAAGCGCATGCAA+CGG | 0.571670 | 6.4:+18033993 | MS.gene41979:CDS |
| GTACTGCTGCAATGAACCGC+TGG | 0.575773 | 6.4:+18032445 | MS.gene41979:CDS |
| ACAACCATGGCCCTTCATCA+AGG | 0.577544 | 6.4:-18031984 | None:intergenic |
| AAGGTCTAGGAAGCTTTCTA+GGG | 0.577908 | 6.4:+18032139 | MS.gene41979:CDS |
| ATGAAGAGACACCATTCTCA+AGG | 0.578356 | 6.4:-18032860 | None:intergenic |
| ACTGATTGGCCATACAGATA+AGG | 0.578919 | 6.4:+18032338 | MS.gene41979:CDS |
| ATTCAACCCAAAGTAGGTCA+AGG | 0.579948 | 6.4:+18032120 | MS.gene41979:CDS |
| CATACGACTGCAAGCTTCTG+GGG | 0.580354 | 6.4:+18033949 | MS.gene41979:CDS |
| GGGTTGCATCCACCTTGTGA+TGG | 0.581031 | 6.4:-18031957 | None:intergenic |
| TAGGAAATGATGTTAGCCAT+GGG | 0.586512 | 6.4:+18032916 | MS.gene41979:CDS |
| CAAAACAATTCAGCTGATGG+TGG | 0.595110 | 6.4:+18032501 | MS.gene41979:CDS |
| TGAACAAAATCCTTAAACCC+CGG | 0.596338 | 6.4:-18033788 | None:intergenic |
| CCGGTAAGCCAAGCACCACA+GGG | 0.596637 | 6.4:-18032749 | None:intergenic |
| CTGGATCGGAACTGAAGAAG+AGG | 0.597828 | 6.4:+18032823 | MS.gene41979:CDS |
| ATAGGAAATGATGTTAGCCA+TGG | 0.599063 | 6.4:+18032915 | MS.gene41979:CDS |
| GAAATGATGTTAGCCATGGG+GGG | 0.602637 | 6.4:+18032919 | MS.gene41979:CDS |
| GGCAACGTGCAAAAGCTCAC+TGG | 0.604353 | 6.4:+18034044 | MS.gene41979:CDS |
| ACATGTATGAAAGTGGCAGC+CGG | 0.610215 | 6.4:-18032768 | None:intergenic |
| TTAGCAGAATGAAATGGTCG+AGG | 0.611147 | 6.4:-18033731 | None:intergenic |
| TACGATCACAAAATCTGTTG+CGG | 0.611212 | 6.4:+18031915 | MS.gene41979:CDS |
| CCAAGCACCACAGGGCGTTG+AGG | 0.611269 | 6.4:-18032741 | None:intergenic |
| GATGGCAGTAGGTTCAGGTA+CGG | 0.615252 | 6.4:-18031791 | None:intergenic |
| GTGTCCTTGATGAAGGGCCA+TGG | 0.631049 | 6.4:+18031980 | MS.gene41979:CDS |
| TGAAGAGACACCATTCTCAA+GGG | 0.640435 | 6.4:-18032859 | None:intergenic |
| CAACCCGTGTCCTTGATGAA+GGG | 0.644868 | 6.4:+18031974 | MS.gene41979:CDS |
| CTTGCTGCCTCAACGCCCTG+TGG | 0.645496 | 6.4:+18032734 | MS.gene41979:CDS |
| AAATGATGTTAGCCATGGGG+GGG | 0.648085 | 6.4:+18032920 | MS.gene41979:CDS |
| ATGGCCCTTCATCAAGGACA+CGG | 0.649316 | 6.4:-18031978 | None:intergenic |
| ATGCTTGGCAGTTAGAGCCG+GGG | 0.666451 | 6.4:+18033771 | MS.gene41979:CDS |
| CAAAAGAACCATTACTAGCG+CGG | 0.672456 | 6.4:-18032263 | None:intergenic |
| TGAAAGTTATCATACAACCA+TGG | 0.673516 | 6.4:-18031997 | None:intergenic |
| TGGCCCTTCATCAAGGACAC+GGG | 0.674647 | 6.4:-18031977 | None:intergenic |
| ACGACTGCAAGCTTCTGGGG+AGG | 0.675409 | 6.4:+18033952 | MS.gene41979:CDS |
| GATGATGGTGTTCGGAACTG+GGG | 0.683724 | 6.4:+18032390 | MS.gene41979:CDS |
| GTTTCAGTTCCATCACAAGG+TGG | 0.685040 | 6.4:+18031948 | MS.gene41979:CDS |
| GGGTCACTCAAAGCTTACGA+TGG | 0.696873 | 6.4:+18032159 | MS.gene41979:CDS |
| AAGCACGCATTATTGATCTG+AGG | 0.699508 | 6.4:+18033978 | MS.gene41979:CDS |
| GCTATGGACAGAATTAACCC+TGG | 0.706850 | 6.4:+18032024 | MS.gene41979:CDS |
| GAATAGGGTCTTGTAGCCAG+CGG | 0.713171 | 6.4:-18032461 | None:intergenic |
| ACTGCTGCTAAAGCAAAACA+AGG | 0.713722 | 6.4:+18032642 | MS.gene41979:CDS |
| CCCAAGAAGATGCCTACTGG+CGG | 0.715249 | 6.4:+18034023 | MS.gene41979:CDS |
| CAAAGTTGGGCACGACACCA+GGG | 0.726322 | 6.4:-18032041 | None:intergenic |
| AGGAAATGATGTTAGCCATG+GGG | 0.729048 | 6.4:+18032917 | MS.gene41979:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTTGGGAATAATATTATT+AGG | - | chr6.4:18033836-18033855 | None:intergenic | 20.0% |
| !! | ATAAATTATTTGCAAGAGTA+CGG | - | chr6.4:18033622-18033641 | None:intergenic | 20.0% |
| ! | AAATGTTTAGCAGAATGAAA+TGG | - | chr6.4:18033740-18033759 | None:intergenic | 25.0% |
| ! | AGCATTCGATCATTAAAATT+TGG | - | chr6.4:18032570-18032589 | None:intergenic | 25.0% |
| ! | CACTTTAAGTATGAAAAGTT+AGG | + | chr6.4:18032294-18032313 | MS.gene41979:CDS | 25.0% |
| ! | GAAATTATAGATACTGTTCT+TGG | + | chr6.4:18033298-18033317 | MS.gene41979:intron | 25.0% |
| ! | GTACTCTTGCAAATAATTTA+TGG | + | chr6.4:18033621-18033640 | MS.gene41979:intron | 25.0% |
| ! | TGATAACTTTCATATTGCTA+TGG | + | chr6.4:18032008-18032027 | MS.gene41979:CDS | 25.0% |
| ! | TTCAACAGTTATATGATTGT+TGG | - | chr6.4:18033281-18033300 | None:intergenic | 25.0% |
| !! | AGGATTTTGTTCATAATTCT+TGG | + | chr6.4:18033798-18033817 | MS.gene41979:CDS | 25.0% |
| !! | TATTATGGTTTTCCAAATAG+TGG | + | chr6.4:18033340-18033359 | MS.gene41979:intron | 25.0% |
| AAGACTCTTAAACCAAGTAA+AGG | - | chr6.4:18033567-18033586 | None:intergenic | 30.0% | |
| AGACTCTTAAACCAAGTAAA+GGG | - | chr6.4:18033566-18033585 | None:intergenic | 30.0% | |
| CATCATCAAGAGAAATTATG+CGG | - | chr6.4:18034135-18034154 | None:intergenic | 30.0% | |
| GATATGGGAAATGATGTAAT+AGG | + | chr6.4:18032897-18032916 | MS.gene41979:CDS | 30.0% | |
| GTATGATGAAAATGCTGTAA+AGG | + | chr6.4:18032974-18032993 | MS.gene41979:intron | 30.0% | |
| TAATAACCAATAACTCTCCA+AGG | - | chr6.4:18033325-18033344 | None:intergenic | 30.0% | |
| TGAAAGTTATCATACAACCA+TGG | - | chr6.4:18032000-18032019 | None:intergenic | 30.0% | |
| TTTAAATCAGGAATTGCACT+CGG | - | chr6.4:18033070-18033089 | None:intergenic | 30.0% | |
| TTTACTTGGTTTAAGAGTCT+TGG | + | chr6.4:18033566-18033585 | MS.gene41979:intron | 30.0% | |
| ! | ACAGCATTTTCATCATACAA+CGG | - | chr6.4:18032972-18032991 | None:intergenic | 30.0% |
| ! | ATTTTCGCTATGAAAATGCT+TGG | + | chr6.4:18033756-18033775 | MS.gene41979:CDS | 30.0% |
| ! | CACAAAATTTTTCCATGCAT+CGG | + | chr6.4:18034087-18034106 | MS.gene41979:intron | 30.0% |
| ! | CTGATTTAAAATACCTAGTC+CGG | + | chr6.4:18033080-18033099 | MS.gene41979:intron | 30.0% |
| ! | TAGTAATGGTTCTTTTGTGA+CGG | + | chr6.4:18032269-18032288 | MS.gene41979:CDS | 30.0% |
| ! | TGGAGAGTTATTGGTTATTA+TGG | + | chr6.4:18033325-18033344 | MS.gene41979:intron | 30.0% |
| ! | TTTTGTTCATAATTCTTGGC+AGG | + | chr6.4:18033802-18033821 | MS.gene41979:CDS | 30.0% |
| !! | CATAATTTCTCTTGATGATG+AGG | + | chr6.4:18034135-18034154 | MS.gene41979:intron | 30.0% |
| !!! | TCTGAATCACATCGATTTTT+GGG | + | chr6.4:18032068-18032087 | MS.gene41979:CDS | 30.0% |
| ATAGGAAATGATGTTAGCCA+TGG | + | chr6.4:18032915-18032934 | MS.gene41979:CDS | 35.0% | |
| ATCTGGTCAAATGCAATTTC+TGG | + | chr6.4:18032680-18032699 | MS.gene41979:intron | 35.0% | |
| CAAAAATCGATGTGATTCAG+AGG | - | chr6.4:18032069-18032088 | None:intergenic | 35.0% | |
| CAAAACGATTAGAAAGTTGC+CGG | - | chr6.4:18033393-18033412 | None:intergenic | 35.0% | |
| CATCAAAACAATTCAGCTGA+TGG | + | chr6.4:18032498-18032517 | MS.gene41979:CDS | 35.0% | |
| CGTCATATCACTATCCTATA+TGG | + | chr6.4:18033690-18033709 | MS.gene41979:intron | 35.0% | |
| GAAGAAGAGGAAAAGAATGA+AGG | + | chr6.4:18032836-18032855 | MS.gene41979:CDS | 35.0% | |
| GACTCTTAAACCAAGTAAAG+GGG | - | chr6.4:18033565-18033584 | None:intergenic | 35.0% | |
| TACGATCACAAAATCTGTTG+CGG | + | chr6.4:18031915-18031934 | MS.gene41979:CDS | 35.0% | |
| TAGGAAATGATGTTAGCCAT+GGG | + | chr6.4:18032916-18032935 | MS.gene41979:CDS | 35.0% | |
| TATGAATTGGACTCTGATGA+TGG | + | chr6.4:18032375-18032394 | MS.gene41979:CDS | 35.0% | |
| TCACTTAAGAAGAGAAGATC+CGG | - | chr6.4:18033115-18033134 | None:intergenic | 35.0% | |
| TGAACAAAATCCTTAAACCC+CGG | - | chr6.4:18033791-18033810 | None:intergenic | 35.0% | |
| TTAAATCAGGAATTGCACTC+GGG | - | chr6.4:18033069-18033088 | None:intergenic | 35.0% | |
| TTCTTCTTCAACAGGGAATT+CGG | + | chr6.4:18032704-18032723 | MS.gene41979:intron | 35.0% | |
| TTTGTTTCAGTTCCATCACA+AGG | + | chr6.4:18031945-18031964 | MS.gene41979:CDS | 35.0% | |
| ! | CAACTTTCTAATCGTTTTGC+AGG | + | chr6.4:18033394-18033413 | MS.gene41979:intron | 35.0% |
| !! | ATTTCTCTTGATGATGAGGT+AGG | + | chr6.4:18034139-18034158 | MS.gene41979:intron | 35.0% |
| !! | CGGACTAGGTATTTTAAATC+AGG | - | chr6.4:18033082-18033101 | None:intergenic | 35.0% |
| !! | TTGGGTTGAATGAAACCAAA+AGG | - | chr6.4:18032111-18032130 | None:intergenic | 35.0% |
| !!! | AGTTAGGTGTTTTTTCTCAC+AGG | + | chr6.4:18032310-18032329 | MS.gene41979:CDS | 35.0% |
| !!! | CTCTGAATCACATCGATTTT+TGG | + | chr6.4:18032067-18032086 | MS.gene41979:CDS | 35.0% |
| !!! | GAAGAACTACGTTTTTTGCT+TGG | + | chr6.4:18033160-18033179 | MS.gene41979:intron | 35.0% |
| !!! | TCAGCTGAATTGTTTTGATG+CGG | - | chr6.4:18032498-18032517 | None:intergenic | 35.0% |
| !!! | TCGTAGAGCAGTTTTAGATT+CGG | + | chr6.4:18033511-18033530 | MS.gene41979:intron | 35.0% |
| !!! | TTGAGCAGCAGGTTTTAAAT+AGG | - | chr6.4:18032418-18032437 | None:intergenic | 35.0% |
| AAAGCTCACTGGTACAAAGA+TGG | + | chr6.4:18034055-18034074 | MS.gene41979:intron | 40.0% | |
| AAATCCCCTAATATGCACCA+CGG | - | chr6.4:18033421-18033440 | None:intergenic | 40.0% | |
| AAGCACGCATTATTGATCTG+AGG | + | chr6.4:18033978-18033997 | MS.gene41979:CDS | 40.0% | |
| AAGCTCACTGGTACAAAGAT+GGG | + | chr6.4:18034056-18034075 | MS.gene41979:intron | 40.0% | |
| AAGGTCTAGGAAGCTTTCTA+GGG | + | chr6.4:18032139-18032158 | MS.gene41979:CDS | 40.0% | |
| ACTGCTGCTAAAGCAAAACA+AGG | + | chr6.4:18032642-18032661 | MS.gene41979:CDS | 40.0% | |
| AGATTTGCCAAAGATGCGTT+CGG | - | chr6.4:18033659-18033678 | None:intergenic | 40.0% | |
| AGGAAATGATGTTAGCCATG+GGG | + | chr6.4:18032917-18032936 | MS.gene41979:CDS | 40.0% | |
| AGTCCAATTCATATAGCTCC+GGG | - | chr6.4:18032368-18032387 | None:intergenic | 40.0% | |
| ATAGGATAGTGATATGACGC+AGG | - | chr6.4:18033689-18033708 | None:intergenic | 40.0% | |
| ATCCTCGAAAACTGCTTGAT+TGG | + | chr6.4:18031811-18031830 | MS.gene41979:CDS | 40.0% | |
| ATGAAGAGACACCATTCTCA+AGG | - | chr6.4:18032863-18032882 | None:intergenic | 40.0% | |
| ATTCAACCCAAAGTAGGTCA+AGG | + | chr6.4:18032120-18032139 | MS.gene41979:CDS | 40.0% | |
| CAAAACAATTCAGCTGATGG+TGG | + | chr6.4:18032501-18032520 | MS.gene41979:CDS | 40.0% | |
| CAAAAGAACCATTACTAGCG+CGG | - | chr6.4:18032266-18032285 | None:intergenic | 40.0% | |
| CGAAAACCATTAATGAGCCA+CGG | - | chr6.4:18033494-18033513 | None:intergenic | 40.0% | |
| GACGAATCACATGATGATTC+TGG | + | chr6.4:18032798-18032817 | MS.gene41979:CDS | 40.0% | |
| GAGTCCAATTCATATAGCTC+CGG | - | chr6.4:18032369-18032388 | None:intergenic | 40.0% | |
| GATGAAAATGCTGTAAAGGC+AGG | + | chr6.4:18032978-18032997 | MS.gene41979:intron | 40.0% | |
| GCAAAACAAGGTATGAGTGT+TGG | + | chr6.4:18032654-18032673 | MS.gene41979:intron | 40.0% | |
| GCATCCAACATGTATGAAAG+TGG | - | chr6.4:18032778-18032797 | None:intergenic | 40.0% | |
| GCTACTAAACTCATTCACCT+AGG | - | chr6.4:18033022-18033041 | None:intergenic | 40.0% | |
| GGTGAATGAGTTTAGTAGCT+TGG | + | chr6.4:18033023-18033042 | MS.gene41979:intron | 40.0% | |
| GGTTTCATTCAACCCAAAGT+AGG | + | chr6.4:18032114-18032133 | MS.gene41979:CDS | 40.0% | |
| GTTCACTGAAATAGGCAAAC+TGG | - | chr6.4:18031861-18031880 | None:intergenic | 40.0% | |
| GTTTAGTAGCTTGGAATTGC+CGG | + | chr6.4:18033032-18033051 | MS.gene41979:intron | 40.0% | |
| TAACGATATCCTAGATGCCA+AGG | + | chr6.4:18033441-18033460 | MS.gene41979:intron | 40.0% | |
| TAGATACTGTTCTTGGTCCT+TGG | + | chr6.4:18033305-18033324 | MS.gene41979:intron | 40.0% | |
| TAGCGCTTATATGTGCATCA+AGG | + | chr6.4:18032197-18032216 | MS.gene41979:CDS | 40.0% | |
| TATGTTTCCGAACGCATCTT+TGG | + | chr6.4:18033649-18033668 | MS.gene41979:intron | 40.0% | |
| TCAGATCAATAATGCGTGCT+TGG | - | chr6.4:18033979-18033998 | None:intergenic | 40.0% | |
| TGAAGAGACACCATTCTCAA+GGG | - | chr6.4:18032862-18032881 | None:intergenic | 40.0% | |
| TTAGCAGAATGAAATGGTCG+AGG | - | chr6.4:18033734-18033753 | None:intergenic | 40.0% | |
| TTTAGTAGCTTGGAATTGCC+GGG | + | chr6.4:18033033-18033052 | MS.gene41979:intron | 40.0% | |
| ! | ACTGATTGGCCATACAGATA+AGG | + | chr6.4:18032338-18032357 | MS.gene41979:CDS | 40.0% |
| ! | CTGTCCCTTTGAAAAAGGAA+TGG | + | chr6.4:18032235-18032254 | MS.gene41979:CDS | 40.0% |
| ! | TCTCTTCATTTGCTGCTGAT+GGG | + | chr6.4:18032874-18032893 | MS.gene41979:CDS | 40.0% |
| ! | TGATTCAGAGGCACAAAGTT+GGG | - | chr6.4:18032057-18032076 | None:intergenic | 40.0% |
| ! | TGTCACTGTCCCTTTGAAAA+AGG | + | chr6.4:18032230-18032249 | MS.gene41979:CDS | 40.0% |
| !! | AATCAAGCAGTTTTCGAGGA+TGG | - | chr6.4:18031812-18031831 | None:intergenic | 40.0% |
| !! | TTCTGGCTTCTTCTTCAACA+GGG | + | chr6.4:18032697-18032716 | MS.gene41979:intron | 40.0% |
| !! | TTTCTGGCTTCTTCTTCAAC+AGG | + | chr6.4:18032696-18032715 | MS.gene41979:intron | 40.0% |
| !!! | ACACGCCATTCCTTTTTCAA+AGG | - | chr6.4:18032243-18032262 | None:intergenic | 40.0% |
| !!! | ATTTTTGGGTGCAAGTGCAT+GGG | + | chr6.4:18032082-18032101 | MS.gene41979:CDS | 40.0% |
| !!! | CACGCCATTCCTTTTTCAAA+GGG | - | chr6.4:18032242-18032261 | None:intergenic | 40.0% |
| !!! | CGTAGAGCAGTTTTAGATTC+GGG | + | chr6.4:18033512-18033531 | MS.gene41979:intron | 40.0% |
| AAATGATGTTAGCCATGGGG+GGG | + | chr6.4:18032920-18032939 | MS.gene41979:CDS | 45.0% | |
| AAATGCTTGGCAGTTAGAGC+CGG | + | chr6.4:18033769-18033788 | MS.gene41979:CDS | 45.0% | |
| AAGTCAAGCCATCAAGGTTG+AGG | - | chr6.4:18031738-18031757 | None:intergenic | 45.0% | |
| ACATACGACTGCAAGCTTCT+GGG | + | chr6.4:18033948-18033967 | MS.gene41979:CDS | 45.0% | |
| ACATGTATGAAAGTGGCAGC+CGG | - | chr6.4:18032771-18032790 | None:intergenic | 45.0% | |
| AGAATGAAGGCCCTTGAGAA+TGG | + | chr6.4:18032849-18032868 | MS.gene41979:CDS | 45.0% | |
| AGCTCACTGGTACAAAGATG+GGG | + | chr6.4:18034057-18034076 | MS.gene41979:intron | 45.0% | |
| AGGTACGGTTTCGAGATTGA+GGG | - | chr6.4:18031779-18031798 | None:intergenic | 45.0% | |
| ATCGGCAACAGCTCAGAAAA+AGG | + | chr6.4:18034105-18034124 | MS.gene41979:intron | 45.0% | |
| CAAAGGGACAGTGACATCAA+TGG | - | chr6.4:18032226-18032245 | None:intergenic | 45.0% | |
| CAAGGTCTAGGAAGCTTTCT+AGG | + | chr6.4:18032138-18032157 | MS.gene41979:CDS | 45.0% | |
| CAGACAAAGTCAAGCCATCA+AGG | - | chr6.4:18031744-18031763 | None:intergenic | 45.0% | |
| CCATCAAGGTTGAGGTTTGA+GGG | - | chr6.4:18031730-18031749 | None:intergenic | 45.0% | |
| CCTAGACCTTGACCTACTTT+GGG | - | chr6.4:18032129-18032148 | None:intergenic | 45.0% | |
| CCTAGATGCCAAGGAGAAAA+GGG | + | chr6.4:18033450-18033469 | MS.gene41979:intron | 45.0% | |
| CGACATGCGTTCACTGAAAT+AGG | - | chr6.4:18031869-18031888 | None:intergenic | 45.0% | |
| CTAAACTCATTCACCTAGGC+AGG | - | chr6.4:18033018-18033037 | None:intergenic | 45.0% | |
| CTAGATGCCAAGGAGAAAAG+GGG | + | chr6.4:18033451-18033470 | MS.gene41979:intron | 45.0% | |
| CTTGGTCCTTGGAGAGTTAT+TGG | + | chr6.4:18033316-18033335 | MS.gene41979:intron | 45.0% | |
| GAAATGATGTTAGCCATGGG+GGG | + | chr6.4:18032919-18032938 | MS.gene41979:CDS | 45.0% | |
| GAATGAAATGGTCGAGGCTT+AGG | - | chr6.4:18033728-18033747 | None:intergenic | 45.0% | |
| GCTATGGACAGAATTAACCC+TGG | + | chr6.4:18032024-18032043 | MS.gene41979:CDS | 45.0% | |
| GGAAATGATGTTAGCCATGG+GGG | + | chr6.4:18032918-18032937 | MS.gene41979:CDS | 45.0% | |
| GGCTTGACTTTGTCTGAAGA+GGG | + | chr6.4:18031748-18031767 | MS.gene41979:CDS | 45.0% | |
| GTGATCGTAACCCATTTGAC+TGG | - | chr6.4:18031904-18031923 | None:intergenic | 45.0% | |
| GTTTCAGTTCCATCACAAGG+TGG | + | chr6.4:18031948-18031967 | MS.gene41979:CDS | 45.0% | |
| TAGATGCCAAGGAGAAAAGG+GGG | + | chr6.4:18033452-18033471 | MS.gene41979:intron | 45.0% | |
| TCACATGATGATTCTGGTGC+TGG | + | chr6.4:18032804-18032823 | MS.gene41979:CDS | 45.0% | |
| TCCTAGACCTTGACCTACTT+TGG | - | chr6.4:18032130-18032149 | None:intergenic | 45.0% | |
| TCCTAGATGCCAAGGAGAAA+AGG | + | chr6.4:18033449-18033468 | MS.gene41979:intron | 45.0% | |
| TGGCTTGACTTTGTCTGAAG+AGG | + | chr6.4:18031747-18031766 | MS.gene41979:CDS | 45.0% | |
| TGTCTGACGTACCTTTCGAA+GGG | + | chr6.4:18033537-18033556 | MS.gene41979:intron | 45.0% | |
| TTAGTAGCTTGGAATTGCCG+GGG | + | chr6.4:18033034-18033053 | MS.gene41979:intron | 45.0% | |
| TTGTCTGACGTACCTTTCGA+AGG | + | chr6.4:18033536-18033555 | MS.gene41979:intron | 45.0% | |
| TTTGCTGCTGATGGGGATAT+GGG | + | chr6.4:18032882-18032901 | MS.gene41979:CDS | 45.0% | |
| ! | ATTTGCTGCTGATGGGGATA+TGG | + | chr6.4:18032881-18032900 | MS.gene41979:CDS | 45.0% |
| ! | CTCTTCATTTGCTGCTGATG+GGG | + | chr6.4:18032875-18032894 | MS.gene41979:CDS | 45.0% |
| ! | GACCAATCAAGCAGTTTTCG+AGG | - | chr6.4:18031816-18031835 | None:intergenic | 45.0% |
| ! | GTCTCTTCATTTGCTGCTGA+TGG | + | chr6.4:18032873-18032892 | MS.gene41979:CDS | 45.0% |
| ! | GTGATTCAGAGGCACAAAGT+TGG | - | chr6.4:18032058-18032077 | None:intergenic | 45.0% |
| ! | GTTTTGCTTTAGCAGCAGTC+TGG | - | chr6.4:18032641-18032660 | None:intergenic | 45.0% |
| ! | TGATGATTCTGGTGCTGGAT+CGG | + | chr6.4:18032809-18032828 | MS.gene41979:CDS | 45.0% |
| !! | CTGCTGCTTGGAATTTTCTC+CGG | + | chr6.4:18033371-18033390 | MS.gene41979:intron | 45.0% |
| !! | GCTGCCACTTTCATACATGT+TGG | + | chr6.4:18032771-18032790 | MS.gene41979:CDS | 45.0% |
| !! | GGAGAGCATTGCAACCATAT+AGG | - | chr6.4:18033707-18033726 | None:intergenic | 45.0% |
| !! | GGTATGAGTGTTGGTCTATC+TGG | + | chr6.4:18032663-18032682 | MS.gene41979:intron | 45.0% |
| !! | TGATGATGGTGTTCGGAACT+GGG | + | chr6.4:18032389-18032408 | MS.gene41979:CDS | 45.0% |
| !! | TGGACTCTGATGATGGTGTT+CGG | + | chr6.4:18032382-18032401 | MS.gene41979:CDS | 45.0% |
| !!! | ATTGTTTTGATGCGGCACAG+TGG | - | chr6.4:18032490-18032509 | None:intergenic | 45.0% |
| !!! | GATTTTTGGGTGCAAGTGCA+TGG | + | chr6.4:18032081-18032100 | MS.gene41979:CDS | 45.0% |
| !!! | GGTGTTTTTTCTCACAGGTG+TGG | + | chr6.4:18032315-18032334 | MS.gene41979:CDS | 45.0% |
| AAACCTGCTGCTCAACGTGT+TGG | + | chr6.4:18032423-18032442 | MS.gene41979:CDS | 50.0% | |
| AAAGGCAGGTCCTGATGATC+AGG | + | chr6.4:18032992-18033011 | MS.gene41979:intron | 50.0% | |
| AACCTTTCTTCAACCGCACG+TGG | - | chr6.4:18033596-18033615 | None:intergenic | 50.0% | |
| AATGCTTGGCAGTTAGAGCC+GGG | + | chr6.4:18033770-18033789 | MS.gene41979:CDS | 50.0% | |
| ACAACCATGGCCCTTCATCA+AGG | - | chr6.4:18031987-18032006 | None:intergenic | 50.0% | |
| AGATGCCAAGGAGAAAAGGG+GGG | + | chr6.4:18033453-18033472 | MS.gene41979:intron | 50.0% | |
| AGGTCCGTGGTGCATATTAG+GGG | + | chr6.4:18033414-18033433 | MS.gene41979:intron | 50.0% | |
| AGGTCTCCGTGGCTCATTAA+TGG | + | chr6.4:18033485-18033504 | MS.gene41979:intron | 50.0% | |
| ATGGCCCTTCATCAAGGACA+CGG | - | chr6.4:18031981-18032000 | None:intergenic | 50.0% | |
| CAACCCGTGTCCTTGATGAA+GGG | + | chr6.4:18031974-18031993 | MS.gene41979:CDS | 50.0% | |
| CAGGTACGGTTTCGAGATTG+AGG | - | chr6.4:18031780-18031799 | None:intergenic | 50.0% | |
| CAGGTCCGTGGTGCATATTA+GGG | + | chr6.4:18033413-18033432 | MS.gene41979:intron | 50.0% | |
| CATACGACTGCAAGCTTCTG+GGG | + | chr6.4:18033949-18033968 | MS.gene41979:CDS | 50.0% | |
| CCATACAGATAAGGTGTGCC+CGG | + | chr6.4:18032347-18032366 | MS.gene41979:CDS | 50.0% | |
| CCCAAAGTAGGTCAAGGTCT+AGG | + | chr6.4:18032126-18032145 | MS.gene41979:CDS | 50.0% | |
| CCCTCAAACCTCAACCTTGA+TGG | + | chr6.4:18031727-18031746 | MS.gene41979:CDS | 50.0% | |
| CTGGATCGGAACTGAAGAAG+AGG | + | chr6.4:18032823-18032842 | MS.gene41979:CDS | 50.0% | |
| GAAGATCCGGATTGAAGTGC+CGG | - | chr6.4:18033102-18033121 | None:intergenic | 50.0% | |
| GACATACGACTGCAAGCTTC+TGG | + | chr6.4:18033947-18033966 | MS.gene41979:CDS | 50.0% | |
| GATGGCAGTAGGTTCAGGTA+CGG | - | chr6.4:18031794-18031813 | None:intergenic | 50.0% | |
| GCAGTTCGACGACCACTATT+TGG | - | chr6.4:18033355-18033374 | None:intergenic | 50.0% | |
| GCCATCAAGGTTGAGGTTTG+AGG | - | chr6.4:18031731-18031750 | None:intergenic | 50.0% | |
| GGGTCACTCAAAGCTTACGA+TGG | + | chr6.4:18032159-18032178 | MS.gene41979:CDS | 50.0% | |
| GTGCCCGGAGCTATATGAAT+TGG | + | chr6.4:18032362-18032381 | MS.gene41979:CDS | 50.0% | |
| TCATTTCTAAGTCCCCCCCA+TGG | - | chr6.4:18032935-18032954 | None:intergenic | 50.0% | |
| TGCCTGGAAGCCAGTCAAAT+GGG | + | chr6.4:18031891-18031910 | MS.gene41979:CDS | 50.0% | |
| TGTCCCAAGAAGATGCCTAC+TGG | + | chr6.4:18034020-18034039 | MS.gene41979:CDS | 50.0% | |
| TGTGTTCATGTAGACCGCAC+CGG | + | chr6.4:18033193-18033212 | MS.gene41979:intron | 50.0% | |
| ! | ATCTGAGGAAGCGCATGCAA+CGG | + | chr6.4:18033993-18034012 | MS.gene41979:CDS | 50.0% |
| ! | CCCTTTTCTCCTTGGCATCT+AGG | - | chr6.4:18033453-18033472 | None:intergenic | 50.0% |
| ! | CTAATCGTTTTGCAGGTCCG+TGG | + | chr6.4:18033401-18033420 | MS.gene41979:intron | 50.0% |
| ! | CTGCTTGATTGGTCGTGTCT+TGG | + | chr6.4:18031822-18031841 | MS.gene41979:CDS | 50.0% |
| ! | GAAAAGGGGGGTGCAACATA+AGG | + | chr6.4:18033465-18033484 | MS.gene41979:intron | 50.0% |
| ! | GAATAGGGTCTTGTAGCCAG+CGG | - | chr6.4:18032464-18032483 | None:intergenic | 50.0% |
| ! | GATGATGGTGTTCGGAACTG+GGG | + | chr6.4:18032390-18032409 | MS.gene41979:CDS | 50.0% |
| ! | TCTCACAGGTGTGGACTGAT+TGG | + | chr6.4:18032324-18032343 | MS.gene41979:CDS | 50.0% |
| !! | AACCCATTTGACTGGCTTCC+AGG | - | chr6.4:18031896-18031915 | None:intergenic | 50.0% |
| !! | CAGTTTTCGAGGATGGCAGT+AGG | - | chr6.4:18031805-18031824 | None:intergenic | 50.0% |
| !! | CTGATGATGGTGTTCGGAAC+TGG | + | chr6.4:18032388-18032407 | MS.gene41979:CDS | 50.0% |
| !! | GTAAAGGGGTACCCTTCGAA+AGG | - | chr6.4:18033551-18033570 | None:intergenic | 50.0% |
| !! | TCGAAGGGTACCCCTTTACT+TGG | + | chr6.4:18033552-18033571 | MS.gene41979:intron | 50.0% |
| !!! | GCGGGGGTCTTGCTTTATTT+TGG | + | chr6.4:18033221-18033240 | MS.gene41979:intron | 50.0% |
| ACAAAGTTGGGCACGACACC+AGG | - | chr6.4:18032045-18032064 | None:intergenic | 55.0% | |
| ATGCTTGGCAGTTAGAGCCG+GGG | + | chr6.4:18033771-18033790 | MS.gene41979:CDS | 55.0% | |
| CAAAGTTGGGCACGACACCA+GGG | - | chr6.4:18032044-18032063 | None:intergenic | 55.0% | |
| CACCACGTGCGGTTGAAGAA+AGG | + | chr6.4:18033591-18033610 | MS.gene41979:intron | 55.0% | |
| CCCAAGAAGATGCCTACTGG+CGG | + | chr6.4:18034023-18034042 | MS.gene41979:CDS | 55.0% | |
| CCGCCAGTAGGCATCTTCTT+GGG | - | chr6.4:18034026-18034045 | None:intergenic | 55.0% | |
| CCGGGCACACCTTATCTGTA+TGG | - | chr6.4:18032350-18032369 | None:intergenic | 55.0% | |
| CCTAGTCCGGCACTTCAATC+CGG | + | chr6.4:18033093-18033112 | MS.gene41979:intron | 55.0% | |
| GAGTCTTGGTACACCACGTG+CGG | + | chr6.4:18033580-18033599 | MS.gene41979:intron | 55.0% | |
| GCAACCCGTGTCCTTGATGA+AGG | + | chr6.4:18031973-18031992 | MS.gene41979:CDS | 55.0% | |
| GCAGGTCCGTGGTGCATATT+AGG | + | chr6.4:18033412-18033431 | MS.gene41979:intron | 55.0% | |
| GCAGTTAGAGCCGGGGTTTA+AGG | + | chr6.4:18033778-18033797 | MS.gene41979:CDS | 55.0% | |
| GCGTTGAGGCAGCAAGTTAG+AGG | - | chr6.4:18032730-18032749 | None:intergenic | 55.0% | |
| GGCAACGTGCAAAAGCTCAC+TGG | + | chr6.4:18034044-18034063 | MS.gene41979:CDS | 55.0% | |
| GGGTTGCATCCACCTTGTGA+TGG | - | chr6.4:18031960-18031979 | None:intergenic | 55.0% | |
| GGTGCAACATAAGGTCTCCG+TGG | + | chr6.4:18033474-18033493 | MS.gene41979:intron | 55.0% | |
| GTACCAACACGTTGAGCAGC+AGG | - | chr6.4:18032429-18032448 | None:intergenic | 55.0% | |
| GTACTGCTGCAATGAACCGC+TGG | + | chr6.4:18032445-18032464 | MS.gene41979:CDS | 55.0% | |
| GTGCCTGGAAGCCAGTCAAA+TGG | + | chr6.4:18031890-18031909 | MS.gene41979:CDS | 55.0% | |
| GTGTCCTTGATGAAGGGCCA+TGG | + | chr6.4:18031980-18031999 | MS.gene41979:CDS | 55.0% | |
| TCGAGGATGGCAGTAGGTTC+AGG | - | chr6.4:18031799-18031818 | None:intergenic | 55.0% | |
| TCTGAGCTGTTGCCGATGCA+TGG | - | chr6.4:18034102-18034121 | None:intergenic | 55.0% | |
| TGGCCCTTCATCAAGGACAC+GGG | - | chr6.4:18031980-18031999 | None:intergenic | 55.0% | |
| TTTGCTGCTCCTAACGCGAC+TGG | + | chr6.4:18032525-18032544 | MS.gene41979:CDS | 55.0% | |
| ! | TTGCACCCCCCTTTTCTCCT+TGG | - | chr6.4:18033461-18033480 | None:intergenic | 55.0% |
| ! | TTTTGATGCGGCACAGTGGC+AGG | - | chr6.4:18032486-18032505 | None:intergenic | 55.0% |
| ! | TTTTGCACGTTGCCGCCAGT+AGG | - | chr6.4:18034038-18034057 | None:intergenic | 55.0% |
| !! | CAAGTGCATGGGCTGCCTTT+TGG | + | chr6.4:18032093-18032112 | MS.gene41979:CDS | 55.0% |
| AGCGTGCGCGGAGGATATGT+CGG | + | chr6.4:18033859-18033878 | MS.gene41979:intron | 60.0% | |
| CCCTGTGGTGCTTGGCTTAC+CGG | + | chr6.4:18032749-18032768 | MS.gene41979:CDS | 60.0% | |
| CCGGTAAGCCAAGCACCACA+GGG | - | chr6.4:18032752-18032771 | None:intergenic | 60.0% | |
| CCTAGGCAGGCCTGATCATC+AGG | - | chr6.4:18033005-18033024 | None:intergenic | 60.0% | |
| CCTGATGATCAGGCCTGCCT+AGG | + | chr6.4:18033002-18033021 | MS.gene41979:intron | 60.0% | |
| GCCGCCAGTAGGCATCTTCT+TGG | - | chr6.4:18034027-18034046 | None:intergenic | 60.0% | |
| GCGCGGAGGATATGTCGGTA+TGG | + | chr6.4:18033864-18033883 | MS.gene41979:intron | 60.0% | |
| GCGGCACAGTGGCAGGAATA+GGG | - | chr6.4:18032479-18032498 | None:intergenic | 60.0% | |
| GCTTGGAATTGCCGGGGTGT+AGG | + | chr6.4:18033040-18033059 | MS.gene41979:intron | 60.0% | |
| GTGGTCGTCGAACTGCTGCT+TGG | + | chr6.4:18033359-18033378 | MS.gene41979:intron | 60.0% | |
| TCCCAAGTTGTCAGCGTGCG+CGG | + | chr6.4:18033847-18033866 | MS.gene41979:intron | 60.0% | |
| TCCGCGCACGCTGACAACTT+GGG | - | chr6.4:18033851-18033870 | None:intergenic | 60.0% | |
| TGCGGCACAGTGGCAGGAAT+AGG | - | chr6.4:18032480-18032499 | None:intergenic | 60.0% | |
| TGGCGTGTCCGCGCTAGTAA+TGG | + | chr6.4:18032255-18032274 | MS.gene41979:CDS | 60.0% | |
| ! | ACGACTGCAAGCTTCTGGGG+AGG | + | chr6.4:18033952-18033971 | MS.gene41979:CDS | 60.0% |
| ! | CATGTAGACCGCACCGGTAG+AGG | + | chr6.4:18033199-18033218 | MS.gene41979:intron | 60.0% |
| !! | CCGGATTGAAGTGCCGGACT+AGG | - | chr6.4:18033096-18033115 | None:intergenic | 60.0% |
| AGCAAGACCCCCGCCTCTAC+CGG | - | chr6.4:18033215-18033234 | None:intergenic | 65.0% | |
| CAAGTTGTCAGCGTGCGCGG+AGG | + | chr6.4:18033850-18033869 | MS.gene41979:intron | 65.0% | |
| CACTCGGGCTACCTACACCC+CGG | - | chr6.4:18033054-18033073 | None:intergenic | 65.0% | |
| CCTCAACGCCCTGTGGTGCT+TGG | + | chr6.4:18032741-18032760 | MS.gene41979:CDS | 65.0% | |
| CTCCGCGCACGCTGACAACT+TGG | - | chr6.4:18033852-18033871 | None:intergenic | 65.0% | |
| CTTGCTGCCTCAACGCCCTG+TGG | + | chr6.4:18032734-18032753 | MS.gene41979:CDS | 65.0% | |
| GCAGCTGCACCAGTCGCGTT+AGG | - | chr6.4:18032537-18032556 | None:intergenic | 65.0% | |
| GCCGGTAAGCCAAGCACCAC+AGG | - | chr6.4:18032753-18032772 | None:intergenic | 65.0% | |
| GTGAACGCATGTCGCGTGCC+TGG | + | chr6.4:18031875-18031894 | MS.gene41979:CDS | 65.0% | |
| ! | GTAGACCGCACCGGTAGAGG+CGG | + | chr6.4:18033202-18033221 | MS.gene41979:intron | 65.0% |
| ! | TAGACCGCACCGGTAGAGGC+GGG | + | chr6.4:18033203-18033222 | MS.gene41979:intron | 65.0% |
| !! | CCAAGCACCACAGGGCGTTG+AGG | - | chr6.4:18032744-18032763 | None:intergenic | 65.0% |
| ! | AGACCGCACCGGTAGAGGCG+GGG | + | chr6.4:18033204-18033223 | MS.gene41979:intron | 70.0% |
| GACCCCCGCCTCTACCGGTG+CGG | - | chr6.4:18033210-18033229 | None:intergenic | 75.0% | |
| ! | GACCGCACCGGTAGAGGCGG+GGG | + | chr6.4:18033205-18033224 | MS.gene41979:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 18031721 | 18034164 | 18031721 | ID=MS.gene41979 |
| chr6.4 | mRNA | 18031721 | 18034164 | 18031721 | ID=MS.gene41979.t1;Parent=MS.gene41979 |
| chr6.4 | exon | 18031721 | 18032663 | 18031721 | ID=MS.gene41979.t1.exon1;Parent=MS.gene41979.t1 |
| chr6.4 | CDS | 18031721 | 18032663 | 18031721 | ID=cds.MS.gene41979.t1;Parent=MS.gene41979.t1 |
| chr6.4 | exon | 18032718 | 18032989 | 18032718 | ID=MS.gene41979.t1.exon2;Parent=MS.gene41979.t1 |
| chr6.4 | CDS | 18032718 | 18032989 | 18032718 | ID=cds.MS.gene41979.t1;Parent=MS.gene41979.t1 |
| chr6.4 | exon | 18033731 | 18033823 | 18033731 | ID=MS.gene41979.t1.exon3;Parent=MS.gene41979.t1 |
| chr6.4 | CDS | 18033731 | 18033823 | 18033731 | ID=cds.MS.gene41979.t1;Parent=MS.gene41979.t1 |
| chr6.4 | exon | 18033941 | 18034065 | 18033941 | ID=MS.gene41979.t1.exon4;Parent=MS.gene41979.t1 |
| chr6.4 | CDS | 18033941 | 18034065 | 18033941 | ID=cds.MS.gene41979.t1;Parent=MS.gene41979.t1 |
| chr6.4 | exon | 18034161 | 18034164 | 18034161 | ID=MS.gene41979.t1.exon5;Parent=MS.gene41979.t1 |
| chr6.4 | CDS | 18034161 | 18034164 | 18034161 | ID=cds.MS.gene41979.t1;Parent=MS.gene41979.t1 |
| Gene Sequence |
| Protein sequence |
