AlfalfaGEDB | MS.gene009781

M. sativa cultivar XinJiangDaYe / MS.gene009781

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009781.t1	PNX72859.1	33.3	447	196	11	2	353	230	669	2.00E-47	199.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009781.t1	A0A2K3L2W5	33.3	447	196	11	2	353	230	669	1.4e-47	199.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene074257	MS.gene009781	PPI
MS.gene018196	MS.gene009781	PPI
MS.gene065627	MS.gene009781	PPI
MS.gene010890	MS.gene009781	PPI
MS.gene018745	MS.gene009781	PPI
MS.gene65546	MS.gene009781	PPI
MS.gene09023	MS.gene009781	PPI
MS.gene059269	MS.gene009781	PPI
MS.gene000506	MS.gene009781	PPI
MS.gene009781	MS.gene49057	PPI
MS.gene032299	MS.gene009781	PPI
MS.gene03936	MS.gene009781	PPI
MS.gene009781	MS.gene048088	PPI
MS.gene009781	MS.gene86868	PPI
MS.gene038098	MS.gene009781	PPI
MS.gene56991	MS.gene009781	PPI
MS.gene60059	MS.gene009781	PPI
MS.gene85538	MS.gene009781	PPI
MS.gene062511	MS.gene009781	PPI
MS.gene22111	MS.gene009781	PPI
MS.gene28545	MS.gene009781	PPI
MS.gene28718	MS.gene009781	PPI
MS.gene055560	MS.gene009781	PPI
MS.gene008275	MS.gene009781	PPI
MS.gene29321	MS.gene009781	PPI
MS.gene34618	MS.gene009781	PPI
MS.gene038757	MS.gene009781	PPI
MS.gene064966	MS.gene009781	PPI
MS.gene016632	MS.gene009781	PPI
MS.gene009781	MS.gene012889	PPI
MS.gene002590	MS.gene009781	PPI
MS.gene40828	MS.gene009781	PPI
MS.gene43924	MS.gene009781	PPI
MS.gene046089	MS.gene009781	PPI
MS.gene047954	MS.gene009781	PPI
MS.gene77990	MS.gene009781	PPI
MS.gene036423	MS.gene009781	PPI
MS.gene054652	MS.gene009781	PPI
MS.gene013644	MS.gene009781	PPI
MS.gene72520	MS.gene009781	PPI
MS.gene66651	MS.gene009781	PPI
MS.gene35202	MS.gene009781	PPI
MS.gene051449	MS.gene009781	PPI
MS.gene019001	MS.gene009781	PPI
MS.gene63743	MS.gene009781	PPI
MS.gene009781	MS.gene060788	PPI
MS.gene63150	MS.gene009781	PPI
MS.gene48477	MS.gene009781	PPI
MS.gene045875	MS.gene009781	PPI
MS.gene54051	MS.gene009781	PPI
MS.gene038394	MS.gene009781	PPI
MS.gene30136	MS.gene009781	PPI
MS.gene009781	MS.gene027994	PPI
MS.gene008861	MS.gene009781	PPI
MS.gene009781	MS.gene022929	PPI
MS.gene009781	MS.gene007022	PPI
MS.gene73261	MS.gene009781	PPI
MS.gene012748	MS.gene009781	PPI
MS.gene024297	MS.gene009781	PPI
MS.gene83979	MS.gene009781	PPI
MS.gene009781	MS.gene69584	PPI
MS.gene45083	MS.gene009781	PPI
MS.gene92517	MS.gene009781	PPI
MS.gene85295	MS.gene009781	PPI
MS.gene057934	MS.gene009781	PPI
MS.gene47792	MS.gene009781	PPI
MS.gene46948	MS.gene009781	PPI
MS.gene009781	MS.gene048342	PPI
MS.gene98471	MS.gene009781	PPI
MS.gene028714	MS.gene009781	PPI
MS.gene009781	MS.gene069624	PPI
MS.gene049610	MS.gene009781	PPI
MS.gene060718	MS.gene009781	PPI
MS.gene025401	MS.gene009781	PPI
MS.gene93396	MS.gene009781	PPI
MS.gene05576	MS.gene009781	PPI
MS.gene52349	MS.gene009781	PPI
MS.gene05231	MS.gene009781	PPI
MS.gene009781	MS.gene88393	PPI
MS.gene98467	MS.gene009781	PPI
MS.gene46353	MS.gene009781	PPI
MS.gene010656	MS.gene009781	PPI
MS.gene009781	MS.gene008658	PPI
MS.gene000629	MS.gene009781	PPI
MS.gene42010	MS.gene009781	PPI
MS.gene40469	MS.gene009781	PPI
MS.gene041264	MS.gene009781	PPI
MS.gene41979	MS.gene009781	PPI
MS.gene024522	MS.gene009781	PPI
MS.gene64130	MS.gene009781	PPI
MS.gene05319	MS.gene009781	PPI
MS.gene050679	MS.gene009781	PPI
MS.gene009781	MS.gene65474	PPI
MS.gene20246	MS.gene009781	PPI
MS.gene055223	MS.gene009781	PPI
MS.gene016719	MS.gene009781	PPI
MS.gene010290	MS.gene009781	PPI
MS.gene053747	MS.gene009781	PPI
MS.gene009781	MS.gene032299	PPI
MS.gene65471	MS.gene009781	PPI
MS.gene061850	MS.gene009781	PPI
MS.gene009781	MS.gene08606	PPI
MS.gene26433	MS.gene009781	PPI
MS.gene34463	MS.gene009781	PPI
MS.gene048088	MS.gene009781	PPI
MS.gene009781	MS.gene000640	PPI
MS.gene009781	MS.gene98756	PPI
MS.gene22730	MS.gene009781	PPI
MS.gene003264	MS.gene009781	PPI
MS.gene073582	MS.gene009781	PPI
MS.gene042559	MS.gene009781	PPI
MS.gene058889	MS.gene009781	PPI
MS.gene009781	MS.gene74639	PPI
MS.gene009781	MS.gene071133	PPI
MS.gene009781	MS.gene60266	PPI
MS.gene98616	MS.gene009781	PPI
MS.gene53904	MS.gene009781	PPI
MS.gene009781	MS.gene54051	PPI
MS.gene08708	MS.gene009781	PPI
MS.gene69586	MS.gene009781	PPI
MS.gene042027	MS.gene009781	PPI
MS.gene85308	MS.gene009781	PPI
MS.gene69490	MS.gene009781	PPI
MS.gene009781	MS.gene37955	PPI
MS.gene015248	MS.gene009781	PPI
MS.gene012889	MS.gene009781	PPI
MS.gene009781	MS.gene92517	PPI
MS.gene80362	MS.gene009781	PPI
MS.gene009781	MS.gene010890	PPI
MS.gene009781	MS.gene84790	PPI
MS.gene44083	MS.gene009781	PPI
MS.gene013193	MS.gene009781	PPI
MS.gene04970	MS.gene009781	PPI
MS.gene08106	MS.gene009781	PPI
MS.gene51799	MS.gene009781	PPI
MS.gene58419	MS.gene009781	PPI
MS.gene009781	MS.gene039692	PPI
MS.gene96163	MS.gene009781	PPI
MS.gene08713	MS.gene009781	PPI
MS.gene23521	MS.gene009781	PPI
MS.gene29406	MS.gene009781	PPI
MS.gene009781	MS.gene77990	PPI
MS.gene009781	MS.gene062511	PPI
MS.gene86275	MS.gene009781	PPI
MS.gene98127	MS.gene009781	PPI
MS.gene87529	MS.gene009781	PPI
MS.gene024405	MS.gene009781	PPI
MS.gene04134	MS.gene009781	PPI
MS.gene009781	MS.gene024841	PPI
MS.gene062067	MS.gene009781	PPI
MS.gene009781	MS.gene46353	PPI
MS.gene57044	MS.gene009781	PPI
MS.gene054508	MS.gene009781	PPI
MS.gene89815	MS.gene009781	PPI
MS.gene017586	MS.gene009781	PPI
MS.gene038676	MS.gene009781	PPI
MS.gene98756	MS.gene009781	PPI
MS.gene009781	MS.gene61651	PPI
MS.gene71637	MS.gene009781	PPI
MS.gene042651	MS.gene009781	PPI
MS.gene009781	MS.gene09023	PPI
MS.gene009781	MS.gene054508	PPI
MS.gene009781	MS.gene025987	PPI
MS.gene009781	MS.gene95960	PPI
MS.gene009781	MS.gene043140	PPI
MS.gene037049	MS.gene009781	PPI
MS.gene034643	MS.gene009781	PPI
MS.gene044729	MS.gene009781	PPI
MS.gene037634	MS.gene009781	PPI
MS.gene009781	MS.gene29321	PPI
MS.gene24070	MS.gene009781	PPI
MS.gene71588	MS.gene009781	PPI
MS.gene04749	MS.gene009781	PPI
MS.gene009781	MS.gene025401	PPI
MS.gene009781	MS.gene015093	PPI
MS.gene071784	MS.gene009781	PPI
MS.gene009781	MS.gene24278	PPI
MS.gene009781	MS.gene000379	PPI
MS.gene009781	MS.gene34618	PPI
MS.gene027169	MS.gene009781	PPI
MS.gene061579	MS.gene009781	PPI
MS.gene009781	MS.gene59460	PPI
MS.gene039692	MS.gene009781	PPI
MS.gene76420	MS.gene009781	PPI
MS.gene071320	MS.gene009781	PPI
MS.gene42903	MS.gene009781	PPI
MS.gene81712	MS.gene009781	PPI
MS.gene026680	MS.gene009781	PPI
MS.gene009781	MS.gene08713	PPI
MS.gene009781	MS.gene09517	PPI
MS.gene048747	MS.gene009781	PPI
MS.gene22200	MS.gene009781	PPI
MS.gene009781	MS.gene62249	PPI
MS.gene055546	MS.gene009781	PPI
MS.gene26038	MS.gene009781	PPI
MS.gene49057	MS.gene009781	PPI
MS.gene073573	MS.gene009781	PPI
MS.gene031967	MS.gene009781	PPI
MS.gene053373	MS.gene009781	PPI
MS.gene009781	MS.gene44144	PPI
MS.gene34812	MS.gene009781	PPI
MS.gene02896	MS.gene009781	PPI
MS.gene009781	MS.gene044729	PPI
MS.gene063214	MS.gene009781	PPI
MS.gene55682	MS.gene009781	PPI
MS.gene97410	MS.gene009781	PPI
MS.gene32415	MS.gene009781	PPI
MS.gene009213	MS.gene009781	PPI
MS.gene009781	MS.gene60390	PPI
MS.gene060788	MS.gene009781	PPI
MS.gene035626	MS.gene009781	PPI
MS.gene067340	MS.gene009781	PPI
MS.gene65623	MS.gene009781	PPI
MS.gene27329	MS.gene009781	PPI
MS.gene71675	MS.gene009781	PPI
MS.gene019177	MS.gene009781	PPI
MS.gene69495	MS.gene009781	PPI
MS.gene049512	MS.gene009781	PPI
MS.gene038623	MS.gene009781	PPI
MS.gene55209	MS.gene009781	PPI
MS.gene05357	MS.gene009781	PPI
MS.gene032311	MS.gene009781	PPI
MS.gene64178	MS.gene009781	PPI
MS.gene009781	MS.gene057934	PPI
MS.gene004417	MS.gene009781	PPI
MS.gene030090	MS.gene009781	PPI
MS.gene96174	MS.gene009781	PPI
MS.gene009781	MS.gene37537	PPI
MS.gene009781	MS.gene069786	PPI
MS.gene86849	MS.gene009781	PPI
MS.gene50392	MS.gene009781	PPI
MS.gene009781	MS.gene025158	PPI
MS.gene072852	MS.gene009781	PPI
MS.gene57019	MS.gene009781	PPI
MS.gene009781	MS.gene27329	PPI
MS.gene009781	MS.gene41393	PPI
MS.gene41393	MS.gene009781	PPI
MS.gene39956	MS.gene009781	PPI
MS.gene021968	MS.gene009781	PPI
MS.gene009781	MS.gene016632	PPI
MS.gene009781	MS.gene018474	PPI
MS.gene09589	MS.gene009781	PPI
MS.gene009781	MS.gene96163	PPI
MS.gene43393	MS.gene009781	PPI
MS.gene057828	MS.gene009781	PPI
MS.gene34197	MS.gene009781	PPI
MS.gene009781	MS.gene03149	PPI
MS.gene66650	MS.gene009781	PPI
MS.gene005120	MS.gene009781	PPI
MS.gene048072	MS.gene009781	PPI
MS.gene060386	MS.gene009781	PPI
MS.gene05436	MS.gene009781	PPI
MS.gene009781	MS.gene61499	PPI
MS.gene059736	MS.gene009781	PPI
MS.gene70932	MS.gene009781	PPI
MS.gene35175	MS.gene009781	PPI
MS.gene009781	MS.gene81194	PPI
MS.gene009781	MS.gene060773	PPI
MS.gene81194	MS.gene009781	PPI
MS.gene025675	MS.gene009781	PPI
MS.gene069786	MS.gene009781	PPI
MS.gene021965	MS.gene009781	PPI
MS.gene055683	MS.gene009781	PPI
MS.gene042614	MS.gene009781	PPI
MS.gene41643	MS.gene009781	PPI
MS.gene009781	MS.gene038394	PPI
MS.gene013890	MS.gene009781	PPI
MS.gene26844	MS.gene009781	PPI
MS.gene021555	MS.gene009781	PPI
MS.gene060773	MS.gene009781	PPI
MS.gene021647	MS.gene009781	PPI
MS.gene96109	MS.gene009781	PPI
MS.gene69584	MS.gene009781	PPI
MS.gene009781	MS.gene24070	PPI
MS.gene019165	MS.gene009781	PPI
MS.gene048706	MS.gene009781	PPI
MS.gene009781	MS.gene055546	PPI
MS.gene009121	MS.gene009781	PPI
MS.gene94654	MS.gene009781	PPI
MS.gene024841	MS.gene009781	PPI
MS.gene51804	MS.gene009781	PPI
MS.gene87845	MS.gene009781	PPI
MS.gene36069	MS.gene009781	PPI
MS.gene95960	MS.gene009781	PPI
MS.gene61452	MS.gene009781	PPI
MS.gene83772	MS.gene009781	PPI
MS.gene008927	MS.gene009781	PPI
MS.gene016102	MS.gene009781	PPI
MS.gene46941	MS.gene009781	PPI
MS.gene045614	MS.gene009781	PPI
MS.gene96541	MS.gene009781	PPI
MS.gene009781	MS.gene068629	PPI
MS.gene049561	MS.gene009781	PPI
MS.gene000634	MS.gene009781	PPI
MS.gene63762	MS.gene009781	PPI
MS.gene30208	MS.gene009781	PPI
MS.gene028716	MS.gene009781	PPI
MS.gene025873	MS.gene009781	PPI
MS.gene012019	MS.gene009781	PPI
MS.gene06164	MS.gene009781	PPI
MS.gene009781	MS.gene21066	PPI
MS.gene013676	MS.gene009781	PPI
MS.gene05358	MS.gene009781	PPI
MS.gene009781	MS.gene98127	PPI
MS.gene009781	MS.gene003264	PPI
MS.gene95561	MS.gene009781	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009781.t1	MTR_3g053920	29.231	195	70	4	1	194	110	237	2.91e-19	87.0
MS.gene009781.t1	MTR_6g033215	33.333	90	58	1	3	90	205	294	1.48e-12	67.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 114 sgRNAs with CRISPR-Local

Find 207 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGTGCCTCTGACTGAATTTA+TGG	0.159046	5.3:-57552424	MS.gene009781:CDS
ACCCTGAAGGCTGGGCGAAT+TGG	0.216145	5.3:-57552698	MS.gene009781:CDS
CTGACTGAATTTATGGATAC+TGG	0.266670	5.3:-57552417	MS.gene009781:CDS
CGGGCAGCAGCTTTGGTTAC+AGG	0.285850	5.3:+57552840	None:intergenic
GATACTGGGGAAGGGAATTT+AGG	0.287962	5.3:-57552402	MS.gene009781:CDS
ATTTAGGAACTGCTGATGTT+AGG	0.309467	5.3:-57552386	MS.gene009781:CDS
TCGGAATGGTGATTGGGTTT+CGG	0.313438	5.3:-57553090	MS.gene009781:CDS
CCCTGAAGGCTGGGCGAATT+GGG	0.314322	5.3:-57552697	MS.gene009781:CDS
ACCCAATTCGCCCAGCCTTC+AGG	0.320186	5.3:+57552696	None:intergenic
CAGGTCCACAATTTGCCGTT+TGG	0.332025	5.3:-57553266	MS.gene009781:CDS
TTTAGGAACTGCTGATGTTA+GGG	0.340560	5.3:-57552385	MS.gene009781:CDS
TCGTTGCTGACCCTGAAGGC+TGG	0.348865	5.3:-57552707	MS.gene009781:CDS
CTGGGCGAATTGGGTGAATA+AGG	0.353157	5.3:-57552688	MS.gene009781:CDS
GCCCCTATGGCATGAGCAAC+AGG	0.374624	5.3:+57553230	None:intergenic
AACTGAATCATATGGATACT+TGG	0.378112	5.3:-57553292	MS.gene009781:CDS
AGGTCCACAATTTGCCGTTT+GGG	0.378977	5.3:-57553265	MS.gene009781:CDS
GTTCGTAAGATCTTTGATTT+CGG	0.379971	5.3:+57552737	None:intergenic
TGGCAGAATTACCGCAGTTC+GGG	0.380252	5.3:-57552760	MS.gene009781:CDS
AGTTGCACTTTCCTCAGAAT+TGG	0.383670	5.3:+57552524	None:intergenic
TGCTTTGCGTGTGGTGTGTT+GGG	0.391648	5.3:-57553035	MS.gene009781:CDS
TACGGCAGAGGTGGAAAATC+TGG	0.396973	5.3:-57551643	MS.gene009781:CDS
TCATATGGATACTTGGGTTC+AGG	0.398316	5.3:-57553285	MS.gene009781:CDS
GTTAGTACGGGCAGCAGCTT+TGG	0.407835	5.3:+57552833	None:intergenic
CCCAATTCGCCCAGCCTTCA+GGG	0.409762	5.3:+57552697	None:intergenic
TAGGTACTGCTGCAACTAAT+AGG	0.421751	5.3:-57552917	MS.gene009781:CDS
TGAGGGCTCGGAATGGTGAT+TGG	0.422593	5.3:-57553097	MS.gene009781:CDS
GGTGCTAGTTGCACTAATAT+AGG	0.423057	5.3:+57551597	None:intergenic
CTCCTGTTGCTCATGCCATA+GGG	0.435767	5.3:-57553232	MS.gene009781:CDS
ATTCAGTAGCATCATCTCAT+TGG	0.439952	5.3:+57552782	None:intergenic
TTGCTTTGCGTGTGGTGTGT+TGG	0.442152	5.3:-57553036	MS.gene009781:CDS
CTGATGATGGAGTGAGAGGC+TGG	0.444770	5.3:-57552971	MS.gene009781:CDS
CCTCCTGTTGCTCATGCCAT+AGG	0.446278	5.3:-57553233	MS.gene009781:CDS
GAGGGCTCGGAATGGTGATT+GGG	0.447792	5.3:-57553096	MS.gene009781:CDS
ATGGCAGAATTACCGCAGTT+CGG	0.453085	5.3:-57552761	MS.gene009781:CDS
GTTGGGTCCAACTGCACAGC+GGG	0.454745	5.3:-57552586	MS.gene009781:CDS
GGCACAGTGGCTGTAGGAAT+AGG	0.462265	5.3:+57552441	None:intergenic
GTACCTAGCCTGCGAGGGAC+TGG	0.466638	5.3:+57552933	None:intergenic
GCGGGGTGAAGTACATGCTC+TGG	0.469493	5.3:-57552568	MS.gene009781:CDS
CGTTGCTGACCCTGAAGGCT+GGG	0.471227	5.3:-57552706	MS.gene009781:CDS
TGATGTTGAACTGAATCATA+TGG	0.477672	5.3:-57553300	MS.gene009781:CDS
TGCTGGTAGACAACTAATGT+TGG	0.479327	5.3:-57552604	MS.gene009781:CDS
TTTGAAAGAGAATCTGATGA+TGG	0.481563	5.3:-57552984	MS.gene009781:CDS
CAGTTCTTTCATGAAGCTGA+AGG	0.490444	5.3:-57553162	MS.gene009781:CDS
GTCGGGGCTGAATTATCTGC+TGG	0.491672	5.3:-57552621	MS.gene009781:CDS
TAGTGGAAGCGTTGTTAGTA+CGG	0.497608	5.3:+57552820	None:intergenic
TGACTGAATTTATGGATACT+GGG	0.499990	5.3:-57552416	MS.gene009781:CDS
ACAGGAACACTCTGTTGCTC+AGG	0.506641	5.3:+57552858	None:intergenic
CATGCCATAGGGGCTTATCT+TGG	0.507345	5.3:-57553221	MS.gene009781:CDS
GAAGAGAAAGCGTGACATGA+AGG	0.514405	5.3:-57552493	MS.gene009781:CDS
GCTGGTAGACAACTAATGTT+GGG	0.515880	5.3:-57552603	MS.gene009781:CDS
TAAGGATGCTGCTGGTGGCC+AGG	0.527021	5.3:-57552670	MS.gene009781:CDS
CACCTCTGCCGTAGGGAACA+TGG	0.527255	5.3:+57551653	None:intergenic
AAATCAAAGATCTTACGAAC+CGG	0.530677	5.3:-57552734	MS.gene009781:CDS
TACCATGTTCCCTACGGCAG+AGG	0.532263	5.3:-57551655	MS.gene009781:CDS
AAACCAGTCCCTCGCAGGCT+AGG	0.538101	5.3:-57552936	MS.gene009781:CDS
AAGACTGGAAGGTGAGGGCT+CGG	0.538373	5.3:-57553109	MS.gene009781:CDS
CAGGGTCAGCAACGATGAGC+CGG	0.538569	5.3:+57552715	None:intergenic
ACAGTGGCTGTAGGAATAGG+AGG	0.542951	5.3:+57552444	None:intergenic
CGAGGCCGCTCAAACAAGAC+TGG	0.543313	5.3:-57553124	MS.gene009781:CDS
CTAGCACCGAGTGTTAAAAC+AGG	0.543641	5.3:-57551582	MS.gene009781:intron
TGATTCAGTTCAACATCAGC+AGG	0.544081	5.3:+57553305	None:intergenic
CTCATCGTTGCTGACCCTGA+AGG	0.545373	5.3:-57552711	MS.gene009781:CDS
ACTTCACCCCGCTGTGCAGT+TGG	0.549571	5.3:+57552579	None:intergenic
CATGTTCCCTACGGCAGAGG+TGG	0.550227	5.3:-57551652	MS.gene009781:CDS
GTGTGGTGTGTTGGGTCATA+CGG	0.550604	5.3:-57553027	MS.gene009781:CDS
TCCTGTGAAAAGCGAACTGA+TGG	0.551032	5.3:-57552883	MS.gene009781:CDS
TTCGCCAAGATAAGCCCCTA+TGG	0.556796	5.3:+57553217	None:intergenic
GGAGGGGCATCTTCAGCAGT+AGG	0.557358	5.3:+57552462	None:intergenic
GTATCAAACCAGTCCCTCGC+AGG	0.558331	5.3:-57552941	MS.gene009781:CDS
TAGGAACTGCTGATGTTAGG+GGG	0.560263	5.3:-57552383	MS.gene009781:CDS
TGAACCCAAACGGCAAATTG+TGG	0.565146	5.3:+57553261	None:intergenic
ACTGAATCATATGGATACTT+GGG	0.568162	5.3:-57553291	MS.gene009781:CDS
ACCTTCCAGTCTTGTTTGAG+CGG	0.571359	5.3:+57553119	None:intergenic
ATAGGATAATGATCAGATGA+AGG	0.572382	5.3:+57551615	None:intergenic
GGAGGTTGTATGAACCCAAA+CGG	0.574474	5.3:+57553251	None:intergenic
GAATTTATGGATACTGGGGA+AGG	0.579711	5.3:-57552411	MS.gene009781:CDS
TAATGTCACGTTGTGTGACC+TGG	0.585283	5.3:+57552652	None:intergenic
TTTGATTTCGGCCCGAACTG+CGG	0.586164	5.3:+57552749	None:intergenic
GTGCATTGGCAACAGATGGT+TGG	0.587369	5.3:-57551680	MS.gene009781:intron
AGTGGAAGCGTTGTTAGTAC+GGG	0.589635	5.3:+57552821	None:intergenic
TCAAACAAGACTGGAAGGTG+AGG	0.590979	5.3:-57553115	MS.gene009781:CDS
GGACTTCTCAGTATTGCTAG+TGG	0.596682	5.3:+57552803	None:intergenic
TCCTGTTGCTCATGCCATAG+GGG	0.599042	5.3:-57553231	MS.gene009781:CDS
GGGGCATCTTCAGCAGTAGG+AGG	0.601463	5.3:+57552465	None:intergenic
TTAGGAACTGCTGATGTTAG+GGG	0.602148	5.3:-57552384	MS.gene009781:CDS
GCCGCTCAAACAAGACTGGA+AGG	0.611436	5.3:-57553120	MS.gene009781:CDS
GTCTTTAAGTATGAAAGACT+CGG	0.611764	5.3:-57553065	MS.gene009781:CDS
TGGAAGGTGAGGGCTCGGAA+TGG	0.614914	5.3:-57553104	MS.gene009781:CDS
GACTGAATTTATGGATACTG+GGG	0.618553	5.3:-57552415	MS.gene009781:CDS
AATTTATGGATACTGGGGAA+GGG	0.623131	5.3:-57552410	MS.gene009781:CDS
CAGCAGTACCTAGCCTGCGA+GGG	0.626887	5.3:+57552928	None:intergenic
GGAACTGCTGATGTTAGGGG+GGG	0.627717	5.3:-57552381	MS.gene009781:CDS
TTGGCATACCATGTTCCCTA+CGG	0.631754	5.3:-57551661	MS.gene009781:CDS
CAAACAAGACTGGAAGGTGA+GGG	0.633749	5.3:-57553114	MS.gene009781:CDS
GGATGTGAGTACCAATTCTG+AGG	0.634150	5.3:-57552535	MS.gene009781:CDS
GTATCCATAAATTCAGTCAG+AGG	0.639354	5.3:+57552420	None:intergenic
TGATGATGGAGTGAGAGGCT+GGG	0.640573	5.3:-57552970	MS.gene009781:CDS
AGGAACTGCTGATGTTAGGG+GGG	0.640930	5.3:-57552382	MS.gene009781:CDS
GGCAGAGGTGGAAAATCTGG+TGG	0.644045	5.3:-57551640	MS.gene009781:CDS
AGTGGCTGTAGGAATAGGAG+GGG	0.644276	5.3:+57552446	None:intergenic
GTCAGAGGCACAGTGGCTGT+AGG	0.645127	5.3:+57552435	None:intergenic
GCAGCAGTACCTAGCCTGCG+AGG	0.650028	5.3:+57552927	None:intergenic
CAGTGGCTGTAGGAATAGGA+GGG	0.655217	5.3:+57552445	None:intergenic
GAATCTGATGATGGAGTGAG+AGG	0.661276	5.3:-57552975	MS.gene009781:CDS
AATGAGATGATGCTACTGAA+TGG	0.663553	5.3:-57552780	MS.gene009781:CDS
GTACTGCTGCAACTAATAGG+TGG	0.667990	5.3:-57552914	MS.gene009781:CDS
TGGGTGAATAAGGATGCTGC+TGG	0.674488	5.3:-57552678	MS.gene009781:CDS
GTGAATAAGGATGCTGCTGG+TGG	0.679101	5.3:-57552675	MS.gene009781:CDS
AGGTTCGAATTGATGTTACG+AGG	0.696060	5.3:-57553142	MS.gene009781:CDS
ACATGCTCTGGAATATACAG+AGG	0.713944	5.3:-57552556	MS.gene009781:CDS
AAATTCAGTCAGAGGCACAG+TGG	0.714395	5.3:+57552428	None:intergenic
CCTATGGCATGAGCAACAGG+AGG	0.716467	5.3:+57553233	None:intergenic
TTGGGTCCAACTGCACAGCG+GGG	0.723865	5.3:-57552585	MS.gene009781:CDS
TGTTGGGTCCAACTGCACAG+CGG	0.736533	5.3:-57552587	MS.gene009781:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	CCTTTAAATATGAAAATGCT+TGG	-	chr5.3:57553261-57553280	MS.gene009781:CDS	25.0%
!	TCAGAAAGAAATAAAACATC+AGG	+	chr5.3:57552625-57552644	None:intergenic	25.0%
!!	CCAAGCATTTTCATATTTAA+AGG	+	chr5.3:57553264-57553283	None:intergenic	25.0%
	AAATCAAAGATCTTACGAAC+CGG	-	chr5.3:57552075-57552094	MS.gene009781:intron	30.0%
	AAATGAAGAATTCCAGTAGA+GGG	+	chr5.3:57552746-57552765	None:intergenic	30.0%
	AACTGAATCATATGGATACT+TGG	-	chr5.3:57551517-57551536	MS.gene009781:intron	30.0%
	AATCAAAACCAAGCAGATAA+CGG	+	chr5.3:57552681-57552700	None:intergenic	30.0%
	ACTGAATCATATGGATACTT+GGG	-	chr5.3:57551518-57551537	MS.gene009781:intron	30.0%
	ATAGGATAATGATCAGATGA+AGG	+	chr5.3:57553197-57553216	None:intergenic	30.0%
	GTCTTTAAGTATGAAAGACT+CGG	-	chr5.3:57551744-57551763	MS.gene009781:intron	30.0%
	TAAATGAAGAATTCCAGTAG+AGG	+	chr5.3:57552747-57552766	None:intergenic	30.0%
	TGACTGAATTTATGGATACT+GGG	-	chr5.3:57552393-57552412	MS.gene009781:CDS	30.0%
	TGATGTTGAACTGAATCATA+TGG	-	chr5.3:57551509-57551528	MS.gene009781:intron	30.0%
	TTGTTTGAACATGAGAAAAG+TGG	-	chr5.3:57552961-57552980	MS.gene009781:CDS	30.0%
	TTTGAAAGAGAATCTGATGA+TGG	-	chr5.3:57551825-57551844	MS.gene009781:intron	30.0%
!	CAAAATTGAAGTACCTAGTT+CGG	-	chr5.3:57552590-57552609	MS.gene009781:CDS	30.0%
!	GTTCGTAAGATCTTTGATTT+CGG	+	chr5.3:57552075-57552094	None:intergenic	30.0%
!!	GAAAGCTTCACTTTTATTAG+AGG	+	chr5.3:57552659-57552678	None:intergenic	30.0%
!!	GAGCAAGTTGGTTAATTAAT+GGG	-	chr5.3:57552995-57553014	MS.gene009781:CDS	30.0%
	AATGAGATGATGCTACTGAA+TGG	-	chr5.3:57552029-57552048	MS.gene009781:intron	35.0%
	AATTTATGGATACTGGGGAA+GGG	-	chr5.3:57552399-57552418	MS.gene009781:CDS	35.0%
	ATTCAGTAGCATCATCTCAT+TGG	+	chr5.3:57552030-57552049	None:intergenic	35.0%
	ATTTAGGAACTGCTGATGTT+AGG	-	chr5.3:57552423-57552442	MS.gene009781:CDS	35.0%
	CTGACTGAATTTATGGATAC+TGG	-	chr5.3:57552392-57552411	MS.gene009781:CDS	35.0%
	CTTTGTTGACACTGATGTAA+CGG	-	chr5.3:57552484-57552503	MS.gene009781:CDS	35.0%
	GACTGAATTTATGGATACTG+GGG	-	chr5.3:57552394-57552413	MS.gene009781:CDS	35.0%
	GGCAATTCACAGGTTATTAT+GGG	-	chr5.3:57552836-57552855	MS.gene009781:CDS	35.0%
	GTATCCATAAATTCAGTCAG+AGG	+	chr5.3:57552392-57552411	None:intergenic	35.0%
	TCAGAAAATCCCAAGCATTA+CGG	+	chr5.3:57552882-57552901	None:intergenic	35.0%
	TGGCAATTCACAGGTTATTA+TGG	-	chr5.3:57552835-57552854	MS.gene009781:CDS	35.0%
	TTATTATGGGTTCCCAGAAA+GGG	-	chr5.3:57552849-57552868	MS.gene009781:CDS	35.0%
	TTGACAGATATACCAATGCT+GGG	-	chr5.3:57553044-57553063	MS.gene009781:CDS	35.0%
	TTTAGGAACTGCTGATGTTA+GGG	-	chr5.3:57552424-57552443	MS.gene009781:CDS	35.0%
!	CGAACTAGGTACTTCAATTT+TGG	+	chr5.3:57552592-57552611	None:intergenic	35.0%
!!	CGAGCAAGTTGGTTAATTAA+TGG	-	chr5.3:57552994-57553013	MS.gene009781:CDS	35.0%
!!	TTGGGATTTTCTGAGAAATC+TGG	-	chr5.3:57552888-57552907	MS.gene009781:CDS	35.0%
	AATGCTTGGAATGTCGAACA+TGG	-	chr5.3:57553275-57553294	MS.gene009781:CDS	40.0%
	ACATCAGTGTCAACAAAGAC+AGG	+	chr5.3:57552482-57552501	None:intergenic	40.0%
	AGGTTCGAATTGATGTTACG+AGG	-	chr5.3:57551667-57551686	MS.gene009781:CDS	40.0%
	AGTTGCACTTTCCTCAGAAT+TGG	+	chr5.3:57552288-57552307	None:intergenic	40.0%
	ATGCTTGGAATGTCGAACAT+GGG	-	chr5.3:57553276-57553295	MS.gene009781:CDS	40.0%
	CAGGCTTAAAAAACCGAACT+AGG	+	chr5.3:57552606-57552625	None:intergenic	40.0%
	CAGTTCTTTCATGAAGCTGA+AGG	-	chr5.3:57551647-57551666	MS.gene009781:CDS	40.0%
	GAATTTATGGATACTGGGGA+AGG	-	chr5.3:57552398-57552417	MS.gene009781:CDS	40.0%
	GAGATGTTGTTGTGTCTAGT+TGG	-	chr5.3:57553303-57553322	MS.gene009781:CDS	40.0%
	GCTGGTAGACAACTAATGTT+GGG	-	chr5.3:57552206-57552225	MS.gene009781:intron	40.0%
	GGTGCTAGTTGCACTAATAT+AGG	+	chr5.3:57553215-57553234	None:intergenic	40.0%
	GTGTTAAAACAGGTGTGTGT+CGG	-	chr5.3:57553237-57553256	MS.gene009781:CDS	40.0%
	GTTATTATGGGTTCCCAGAA+AGG	-	chr5.3:57552848-57552867	MS.gene009781:CDS	40.0%
	GTTGACAGATATACCAATGC+TGG	-	chr5.3:57553043-57553062	MS.gene009781:CDS	40.0%
	TACACATGGTTCAAAAGCCT+AGG	-	chr5.3:57553074-57553093	MS.gene009781:CDS	40.0%
	TATTATGGGTTCCCAGAAAG+GGG	-	chr5.3:57552850-57552869	MS.gene009781:CDS	40.0%
	TCATATGGATACTTGGGTTC+AGG	-	chr5.3:57551524-57551543	MS.gene009781:intron	40.0%
	TGATTCAGTTCAACATCAGC+AGG	+	chr5.3:57551507-57551526	None:intergenic	40.0%
	TGCTGGTAGACAACTAATGT+TGG	-	chr5.3:57552205-57552224	MS.gene009781:intron	40.0%
	TGTGCCTCTGACTGAATTTA+TGG	-	chr5.3:57552385-57552404	MS.gene009781:CDS	40.0%
	TTAGGAACTGCTGATGTTAG+GGG	-	chr5.3:57552425-57552444	MS.gene009781:CDS	40.0%
!	AGGCTTTTGAACCATGTGTA+AGG	+	chr5.3:57553074-57553093	None:intergenic	40.0%
!	CGTATTGATGATCCTGCAAA+GGG	-	chr5.3:57552808-57552827	MS.gene009781:CDS	40.0%
!	CGTGACATTACTCTTTTCGT+CGG	-	chr5.3:57552170-57552189	MS.gene009781:intron	40.0%
!	GCATTGGTATATCTGTCAAC+CGG	+	chr5.3:57553043-57553062	None:intergenic	40.0%
!	GGCTTTTGAACCATGTGTAA+GGG	+	chr5.3:57553073-57553092	None:intergenic	40.0%
!	GTGACATTACTCTTTTCGTC+GGG	-	chr5.3:57552171-57552190	MS.gene009781:intron	40.0%
!	TAGGTACTGCTGCAACTAAT+AGG	-	chr5.3:57551892-57551911	MS.gene009781:intron	40.0%
!	TGACATTACTCTTTTCGTCG+GGG	-	chr5.3:57552172-57552191	MS.gene009781:intron	40.0%
!	TTGCTGTTAGTTGTACTGGT+CGG	-	chr5.3:57552707-57552726	MS.gene009781:CDS	40.0%
!!	AATTAATGGGTTCCGACAAG+CGG	-	chr5.3:57553008-57553027	MS.gene009781:CDS	40.0%
!!	ACATGCTCTGGAATATACAG+AGG	-	chr5.3:57552253-57552272	MS.gene009781:intron	40.0%
!!	TAGTGGAAGCGTTGTTAGTA+CGG	+	chr5.3:57551992-57552011	None:intergenic	40.0%
!!!	CACACACCTGTTTTAACACT+CGG	+	chr5.3:57553236-57553255	None:intergenic	40.0%
!!!	TCAATTTTGGAACTACACGC+AGG	+	chr5.3:57552579-57552598	None:intergenic	40.0%
	AAATCCCCACCTATACACCA+CGG	+	chr5.3:57552931-57552950	None:intergenic	45.0%
	ACAAGGTTACCGTGGTGTAT+AGG	-	chr5.3:57552919-57552938	MS.gene009781:CDS	45.0%
	AGAGAGGTTAGATCGTGCAT+TGG	-	chr5.3:57553115-57553134	MS.gene009781:CDS	45.0%
	ATGGCAGAATTACCGCAGTT+CGG	-	chr5.3:57552048-57552067	MS.gene009781:intron	45.0%
	CAAACAAGACTGGAAGGTGA+GGG	-	chr5.3:57551695-57551714	MS.gene009781:intron	45.0%
	CATACTAGACTCATTCCCCT+CGG	+	chr5.3:57552532-57552551	None:intergenic	45.0%
	GAAATCTGGCAAGTGACACA+AGG	-	chr5.3:57552902-57552921	MS.gene009781:CDS	45.0%
	GAAGCTTTCCGTTATCTGCT+TGG	-	chr5.3:57552670-57552689	MS.gene009781:CDS	45.0%
	GACCAGTACAACTAACAGCA+AGG	+	chr5.3:57552708-57552727	None:intergenic	45.0%
	GATACTGGGGAAGGGAATTT+AGG	-	chr5.3:57552407-57552426	MS.gene009781:CDS	45.0%
	GGACTTCTCAGTATTGCTAG+TGG	+	chr5.3:57552009-57552028	None:intergenic	45.0%
	GGAGGTTGTATGAACCCAAA+CGG	+	chr5.3:57551561-57551580	None:intergenic	45.0%
	GGATGTGAGTACCAATTCTG+AGG	-	chr5.3:57552274-57552293	MS.gene009781:intron	45.0%
	GGGGAATGAGTCTAGTATGT+TGG	-	chr5.3:57552533-57552552	MS.gene009781:CDS	45.0%
	GTACTGCTGCAACTAATAGG+TGG	-	chr5.3:57551895-57551914	MS.gene009781:intron	45.0%
	TAATGTCACGTTGTGTGACC+TGG	+	chr5.3:57552160-57552179	None:intergenic	45.0%
	TAGGAACTGCTGATGTTAGG+GGG	-	chr5.3:57552426-57552445	MS.gene009781:CDS	45.0%
	TCAAACAAGACTGGAAGGTG+AGG	-	chr5.3:57551694-57551713	MS.gene009781:intron	45.0%
	TCCTGTGAAAAGCGAACTGA+TGG	-	chr5.3:57551926-57551945	MS.gene009781:intron	45.0%
	TCGGAATGGTGATTGGGTTT+CGG	-	chr5.3:57551719-57551738	MS.gene009781:intron	45.0%
	TGAACCCAAACGGCAAATTG+TGG	+	chr5.3:57551551-57551570	None:intergenic	45.0%
	TGTTGACACTGATGTAACGG+CGG	-	chr5.3:57552487-57552506	MS.gene009781:CDS	45.0%
	TTGGCATACCATGTTCCCTA+CGG	-	chr5.3:57553148-57553167	MS.gene009781:CDS	45.0%
!	AAATTCAGTCAGAGGCACAG+TGG	+	chr5.3:57552384-57552403	None:intergenic	45.0%
!	AGGTCCACAATTTGCCGTTT+GGG	-	chr5.3:57551544-57551563	MS.gene009781:intron	45.0%
!	CTAGCACCGAGTGTTAAAAC+AGG	-	chr5.3:57553227-57553246	MS.gene009781:CDS	45.0%
!	GAAGAGAAAGCGTGACATGA+AGG	-	chr5.3:57552316-57552335	MS.gene009781:intron	45.0%
!	GCGTATTGATGATCCTGCAA+AGG	-	chr5.3:57552807-57552826	MS.gene009781:CDS	45.0%
!	GGAACTTTTTGCTTTGCGTG+TGG	-	chr5.3:57551765-57551784	MS.gene009781:intron	45.0%
!!	ACCTTCCAGTCTTGTTTGAG+CGG	+	chr5.3:57551693-57551712	None:intergenic	45.0%
!!	AGTGGAAGCGTTGTTAGTAC+GGG	+	chr5.3:57551991-57552010	None:intergenic	45.0%
!!	GAATCTGATGATGGAGTGAG+AGG	-	chr5.3:57551834-57551853	MS.gene009781:intron	45.0%
!!	TGCCTTGCTGTTAGTTGTAC+TGG	-	chr5.3:57552703-57552722	MS.gene009781:CDS	45.0%
	AAGGGCTCTTGGCAATTCAC+AGG	-	chr5.3:57552826-57552845	MS.gene009781:CDS	50.0%
	AATTGCCAAGAGCCCTTTGC+AGG	+	chr5.3:57552823-57552842	None:intergenic	50.0%
	ACAGGAACACTCTGTTGCTC+AGG	+	chr5.3:57551954-57551973	None:intergenic	50.0%
	ACAGTGGCTGTAGGAATAGG+AGG	+	chr5.3:57552368-57552387	None:intergenic	50.0%
	AGGAACTGCTGATGTTAGGG+GGG	-	chr5.3:57552427-57552446	MS.gene009781:CDS	50.0%
	AGGTTACCGTGGTGTATAGG+TGG	-	chr5.3:57552922-57552941	MS.gene009781:CDS	50.0%
	AGTGGCTGTAGGAATAGGAG+GGG	+	chr5.3:57552366-57552385	None:intergenic	50.0%
	ATGATCCTGCAAAGGGCTCT+TGG	-	chr5.3:57552815-57552834	MS.gene009781:CDS	50.0%
	CAAGTGACACAAGGTTACCG+TGG	-	chr5.3:57552911-57552930	MS.gene009781:CDS	50.0%
	CAGGTCCACAATTTGCCGTT+TGG	-	chr5.3:57551543-57551562	MS.gene009781:intron	50.0%
	CAGTGGCTGTAGGAATAGGA+GGG	+	chr5.3:57552367-57552386	None:intergenic	50.0%
	CATGCCATAGGGGCTTATCT+TGG	-	chr5.3:57551588-57551607	MS.gene009781:CDS	50.0%
	CTAGTATGTTGGAACTGCCG+AGG	-	chr5.3:57552544-57552563	MS.gene009781:CDS	50.0%
	CTCCTGTTGCTCATGCCATA+GGG	-	chr5.3:57551577-57551596	MS.gene009781:intron	50.0%
	CTGGGCGAATTGGGTGAATA+AGG	-	chr5.3:57552121-57552140	MS.gene009781:intron	50.0%
	GGTTACCGTGGTGTATAGGT+GGG	-	chr5.3:57552923-57552942	MS.gene009781:CDS	50.0%
	GTGAATAAGGATGCTGCTGG+TGG	-	chr5.3:57552134-57552153	MS.gene009781:intron	50.0%
	GTGCAACAGAACGAGCAAGT+TGG	-	chr5.3:57552983-57553002	MS.gene009781:CDS	50.0%
	GTGTAAGGGTAACCCAGCAT+TGG	+	chr5.3:57553059-57553078	None:intergenic	50.0%
	GTGTGGTGTGTTGGGTCATA+CGG	-	chr5.3:57551782-57551801	MS.gene009781:intron	50.0%
	GTTACCGTGGTGTATAGGTG+GGG	-	chr5.3:57552924-57552943	MS.gene009781:CDS	50.0%
	GTTGACACTGATGTAACGGC+GGG	-	chr5.3:57552488-57552507	MS.gene009781:CDS	50.0%
	TACGGCAGAGGTGGAAAATC+TGG	-	chr5.3:57553166-57553185	MS.gene009781:CDS	50.0%
	TCCTGTTGCTCATGCCATAG+GGG	-	chr5.3:57551578-57551597	MS.gene009781:intron	50.0%
	TGCTGGGTTACCCTTACACA+TGG	-	chr5.3:57553060-57553079	MS.gene009781:CDS	50.0%
	TGCTTTGCGTGTGGTGTGTT+GGG	-	chr5.3:57551774-57551793	MS.gene009781:intron	50.0%
	TGGCAGAATTACCGCAGTTC+GGG	-	chr5.3:57552049-57552068	MS.gene009781:intron	50.0%
	TGGGTGAATAAGGATGCTGC+TGG	-	chr5.3:57552131-57552150	MS.gene009781:intron	50.0%
	TTCGCCAAGATAAGCCCCTA+TGG	+	chr5.3:57551595-57551614	None:intergenic	50.0%
	TTGCTTTGCGTGTGGTGTGT+TGG	-	chr5.3:57551773-57551792	MS.gene009781:intron	50.0%
!	AGATTTTCCACCTCTGCCGT+AGG	+	chr5.3:57553167-57553186	None:intergenic	50.0%
!	GATCGTGCATTGGCAACAGA+TGG	-	chr5.3:57553125-57553144	MS.gene009781:CDS	50.0%
!	GATTTTCCACCTCTGCCGTA+GGG	+	chr5.3:57553166-57553185	None:intergenic	50.0%
!	GTGCATTGGCAACAGATGGT+TGG	-	chr5.3:57553129-57553148	MS.gene009781:CDS	50.0%
!	GTTAGTTGTACTGGTCGGAG+TGG	-	chr5.3:57552712-57552731	MS.gene009781:CDS	50.0%
!	TTTGATTTCGGCCCGAACTG+CGG	+	chr5.3:57552063-57552082	None:intergenic	50.0%
!!	GCCATCAGTTCGCTTTTCAC+AGG	+	chr5.3:57551930-57551949	None:intergenic	50.0%
!!	TGATGATGGAGTGAGAGGCT+GGG	-	chr5.3:57551839-57551858	MS.gene009781:intron	50.0%
	AACCTCTCTTCCACTGCACG+TGG	+	chr5.3:57553104-57553123	None:intergenic	55.0%
	AAGACTGGAAGGTGAGGGCT+CGG	-	chr5.3:57551700-57551719	MS.gene009781:intron	55.0%
	ACCTCTCTTCCACTGCACGT+GGG	+	chr5.3:57553103-57553122	None:intergenic	55.0%
	ACTGATGTAACGGCGGGTCT+TGG	-	chr5.3:57552494-57552513	MS.gene009781:CDS	55.0%
	CACGCAGGTTACCTAAGCCT+CGG	+	chr5.3:57552564-57552583	None:intergenic	55.0%
	CCTATGGCATGAGCAACAGG+AGG	+	chr5.3:57551579-57551598	None:intergenic	55.0%
	CCTCCTGTTGCTCATGCCAT+AGG	-	chr5.3:57551576-57551595	MS.gene009781:intron	55.0%
	CGGAATCAGTCACCGCTTGT+CGG	+	chr5.3:57553023-57553042	None:intergenic	55.0%
	CTCATCGTTGCTGACCCTGA+AGG	-	chr5.3:57552098-57552117	MS.gene009781:intron	55.0%
	GAGGGCTCGGAATGGTGATT+GGG	-	chr5.3:57551713-57551732	MS.gene009781:intron	55.0%
	GCCGCTCAAACAAGACTGGA+AGG	-	chr5.3:57551689-57551708	MS.gene009781:intron	55.0%
	GGAACTGCTGATGTTAGGGG+GGG	-	chr5.3:57552428-57552447	MS.gene009781:CDS	55.0%
	GGCACAGTGGCTGTAGGAAT+AGG	+	chr5.3:57552371-57552390	None:intergenic	55.0%
	GGCAGAGGTGGAAAATCTGG+TGG	-	chr5.3:57553169-57553188	MS.gene009781:CDS	55.0%
	GGGAAGACGCCGTAATGCTT+GGG	-	chr5.3:57552870-57552889	MS.gene009781:CDS	55.0%
	GTATCAAACCAGTCCCTCGC+AGG	-	chr5.3:57551868-57551887	MS.gene009781:intron	55.0%
	GTCGGGGCTGAATTATCTGC+TGG	-	chr5.3:57552188-57552207	MS.gene009781:intron	55.0%
	GTTAGTACGGGCAGCAGCTT+TGG	+	chr5.3:57551979-57551998	None:intergenic	55.0%
	TACCATGTTCCCTACGGCAG+AGG	-	chr5.3:57553154-57553173	MS.gene009781:CDS	55.0%
	TACGGCGTCTTCCCCTTTCT+GGG	+	chr5.3:57552864-57552883	None:intergenic	55.0%
	TACTGGTCGGAGTGGTGGTT+TGG	-	chr5.3:57552720-57552739	MS.gene009781:CDS	55.0%
	TGAGGGCTCGGAATGGTGAT+TGG	-	chr5.3:57551712-57551731	MS.gene009781:intron	55.0%
	TGTTGGAACTGCCGAGGCTT+AGG	-	chr5.3:57552550-57552569	MS.gene009781:CDS	55.0%
	TGTTGGGTCCAACTGCACAG+CGG	-	chr5.3:57552222-57552241	MS.gene009781:intron	55.0%
	TTACGGCGTCTTCCCCTTTC+TGG	+	chr5.3:57552865-57552884	None:intergenic	55.0%
!	AGTTGTACTGGTCGGAGTGG+TGG	-	chr5.3:57552715-57552734	MS.gene009781:CDS	55.0%
!	CGACAAGCGGTGACTGATTC+CGG	-	chr5.3:57553021-57553040	MS.gene009781:CDS	55.0%
!!	CTGATGATGGAGTGAGAGGC+TGG	-	chr5.3:57551838-57551857	MS.gene009781:intron	55.0%
	AAACCAGTCCCTCGCAGGCT+AGG	-	chr5.3:57551873-57551892	MS.gene009781:intron	60.0%
	ACCCAATTCGCCCAGCCTTC+AGG	+	chr5.3:57552116-57552135	None:intergenic	60.0%
	ACCCTGAAGGCTGGGCGAAT+TGG	-	chr5.3:57552111-57552130	MS.gene009781:intron	60.0%
	ACTTCACCCCGCTGTGCAGT+TGG	+	chr5.3:57552233-57552252	None:intergenic	60.0%
	CACCTCTGCCGTAGGGAACA+TGG	+	chr5.3:57553159-57553178	None:intergenic	60.0%
	CAGCAGTACCTAGCCTGCGA+GGG	+	chr5.3:57551884-57551903	None:intergenic	60.0%
	CAGGGTCAGCAACGATGAGC+CGG	+	chr5.3:57552097-57552116	None:intergenic	60.0%
	CATGTTCCCTACGGCAGAGG+TGG	-	chr5.3:57553157-57553176	MS.gene009781:CDS	60.0%
	CCCAATTCGCCCAGCCTTCA+GGG	+	chr5.3:57552115-57552134	None:intergenic	60.0%
	CCCTGAAGGCTGGGCGAATT+GGG	-	chr5.3:57552112-57552131	MS.gene009781:intron	60.0%
	CCTCTCTTCCACTGCACGTG+GGG	+	chr5.3:57553102-57553121	None:intergenic	60.0%
	CGAGGCCGCTCAAACAAGAC+TGG	-	chr5.3:57551685-57551704	MS.gene009781:intron	60.0%
	CGTTGCTGACCCTGAAGGCT+GGG	-	chr5.3:57552103-57552122	MS.gene009781:intron	60.0%
	CTAGACTCATTCCCCTCGGC+AGG	+	chr5.3:57552528-57552547	None:intergenic	60.0%
	GATGTAACGGCGGGTCTTGG+TGG	-	chr5.3:57552497-57552516	MS.gene009781:CDS	60.0%
	GCCCCTATGGCATGAGCAAC+AGG	+	chr5.3:57551582-57551601	None:intergenic	60.0%
	GCGGGGTGAAGTACATGCTC+TGG	-	chr5.3:57552241-57552260	MS.gene009781:intron	60.0%
	GGGGAAGACGCCGTAATGCT+TGG	-	chr5.3:57552869-57552888	MS.gene009781:CDS	60.0%
	GTTGGGTCCAACTGCACAGC+GGG	-	chr5.3:57552223-57552242	MS.gene009781:intron	60.0%
	TAAGGATGCTGCTGGTGGCC+AGG	-	chr5.3:57552139-57552158	MS.gene009781:intron	60.0%
	TCGTTGCTGACCCTGAAGGC+TGG	-	chr5.3:57552102-57552121	MS.gene009781:intron	60.0%
	TGGAAGGTGAGGGCTCGGAA+TGG	-	chr5.3:57551705-57551724	MS.gene009781:intron	60.0%
	TTGGGTCCAACTGCACAGCG+GGG	-	chr5.3:57552224-57552243	MS.gene009781:intron	60.0%
!	CGGGCAGCAGCTTTGGTTAC+AGG	+	chr5.3:57551972-57551991	None:intergenic	60.0%
!	GGGGCATCTTCAGCAGTAGG+AGG	+	chr5.3:57552347-57552366	None:intergenic	60.0%
!	GTCAGAGGCACAGTGGCTGT+AGG	+	chr5.3:57552377-57552396	None:intergenic	60.0%
!	GTGGTGGTTTGGCCCTCTAC+TGG	-	chr5.3:57552731-57552750	MS.gene009781:CDS	60.0%
!!	GGAGGGGCATCTTCAGCAGT+AGG	+	chr5.3:57552350-57552369	None:intergenic	60.0%
	CCCCACGTGCAGTGGAAGAG+AGG	-	chr5.3:57553099-57553118	MS.gene009781:CDS	65.0%
	CCTAGGTACCCCACGTGCAG+TGG	-	chr5.3:57553091-57553110	MS.gene009781:CDS	65.0%
	GCAGCAGTACCTAGCCTGCG+AGG	+	chr5.3:57551885-57551904	None:intergenic	65.0%
	GTACCTAGCCTGCGAGGGAC+TGG	+	chr5.3:57551879-57551898	None:intergenic	65.0%
!	AACGGCGGGTCTTGGTGGTC+AGG	-	chr5.3:57552502-57552521	MS.gene009781:CDS	65.0%
!	CCACTGCACGTGGGGTACCT+AGG	+	chr5.3:57553094-57553113	None:intergenic	65.0%
!	TTGGTGGTCAGGCCTGCCGA+GGG	-	chr5.3:57552513-57552532	MS.gene009781:CDS	65.0%
	TGGTGGTCAGGCCTGCCGAG+GGG	-	chr5.3:57552514-57552533	MS.gene009781:CDS	70.0%
!	CTTGGTGGTCAGGCCTGCCG+AGG	-	chr5.3:57552512-57552531	MS.gene009781:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.3	gene	57551498	57553333	57551498	ID=MS.gene009781
chr5.3	mRNA	57551498	57553333	57551498	ID=MS.gene009781.t1;Parent=MS.gene009781
chr5.3	exon	57552379	57553333	57552379	ID=MS.gene009781.t1.exon1;Parent=MS.gene009781.t1
chr5.3	CDS	57552379	57553333	57552379	ID=cds.MS.gene009781.t1;Parent=MS.gene009781.t1
chr5.3	exon	57551583	57551687	57551583	ID=MS.gene009781.t1.exon2;Parent=MS.gene009781.t1
chr5.3	CDS	57551583	57551687	57551583	ID=cds.MS.gene009781.t1;Parent=MS.gene009781.t1
chr5.3	exon	57551498	57551502	57551498	ID=MS.gene009781.t1.exon3;Parent=MS.gene009781.t1
chr5.3	CDS	57551498	57551502	57551498	ID=cds.MS.gene009781.t1;Parent=MS.gene009781.t1

Gene Sequence

>MS.gene009781

ATGGTGCCTGCTGATGTTGAACTGAATCATATGGATACTTGGGTTCAGGTCCACAATTTGCCGTTTGGGTTCATACAACCTCCTGTTGCTCATGCCATAGGGGCTTATCTTGGCGAATTCAAAGAATATCATGAGAAGAACTCTCTGCACAGTTCTTTCATGAAGCTGAAGGTTCGAATTGATGTTACGAGGCCGCTCAAACAAGACTGGAAGGTGAGGGCTCGGAATGGTGATTGGGTTTCGGTTGTCTTTAAGTATGAAAGACTCGGAACTTTTTGCTTTGCGTGTGGTGTGTTGGGTCATACGGATCGTACATGTGAGACATTATTTGAAAGAGAATCTGATGATGGAGTGAGAGGCTGGGATGCAAGTATCAAACCAGTCCCTCGCAGGCTAGGTACTGCTGCAACTAATAGGTGGCTGCGTGATCCTGTGAAAAGCGAACTGATGGCTCCTGAGCAACAGAGTGTTCCTGTAACCAAAGCTGCTGCCCGTACTAACAACGCTTCCACTAGCAATACTGAGAAGTCCAATGAGATGATGCTACTGAATGGCAGAATTACCGCAGTTCGGGCCGAAATCAAAGATCTTACGAACCGGCTCATCGTTGCTGACCCTGAAGGCTGGGCGAATTGGGTGAATAAGGATGCTGCTGGTGGCCAGGTCACACAACGTGACATTACTCTTTTCGTCGGGGCTGAATTATCTGCTGGTAGACAACTAATGTTGGGTCCAACTGCACAGCGGGGTGAAGTACATGCTCTGGAATATACAGAGGATGTGAGTACCAATTCTGAGGAAAGTGCAACTGAGCTAAAGAAGAGAAAGCGTGACATGAAGGATGCTCCTCCTACTGCTGAAGATGCCCCTCCTATTCCTACAGCCACTGTGCCTCTGACTGAATTTATGGATACTGGGGAAGGGAATTTAGGAACTGCTGATGTTAGGGGGGGAAGTAATAATTTAACTGTTTTTAACAATCCTGTCTTTGTTGACACTGATGTAACGGCGGGTCTTGGTGGTCAGGCCTGCCGAGGGGAATGAGTCTAGTATGTTGGAACTGCCGAGGCTTAGGTAACCTGCGTGTAGTTCCAAAATTGAAGTACCTAGTTCGGTTTTTTAAGCCTGATGTTTTATTTCTTTCTGAGACTCTTGTCTCCTCTAATAAAAGTGAAGCTTTCCGTTATCTGCTTGGTTTTGATTCTTGCCTTGCTGTTAGTTGTACTGGTCGGAGTGGTGGTTTGGCCCTCTACTGGAATTCTTCATTTAATTGTTCTGTTATTAATTATTCAAATAATCATATTTCTGTGCGTATTGATGATCCTGCAAAGGGCTCTTGGCAATTCACAGGTTATTATGGGTTCCCAGAAAGGGGAAGACGCCGTAATGCTTGGGATTTTCTGAGAAATCTGGCAAGTGACACAAGGTTACCGTGGTGTATAGGTGGGGATTTTAACGACATATTGTTTGAACATGAGAAAAGTGGTGCAACAGAACGAGCAAGTTGGTTAATTAATGGGTTCCGACAAGCGGTGACTGATTCCGGTTGACAGATATACCAATGCTGGGTTACCCTTACACATGGTTCAAAAGCCTAGGTACCCCACGTGCAGTGGAAGAGAGGTTAGATCGTGCATTGGCAACAGATGGTTGGCATACCATGTTCCCTACGGCAGAGGTGGAAAATCTGGTGGCTCCTTCATCTGATCATTATCCTATATTAGTGCAACTAGCACCGAGTGTTAAAACAGGTGTGTGTCGGTCCTTTAAATATGAAAATGCTTGGAATGTCGAACATGGGCTCAGAGATGTTGTTGTGTCTAGTTGGCAGCATAA

Protein sequence

>MS.gene009781.t1

MVPADVELNHMDTWVQVHNLPFGFIQPPVAHAIGAYLGEFKEYHEKNSLHSSFMKLKVRIDVTRPLKQDWKVRARNGDWVSVVFKYERLGTFCFACGVLGHTDRTCETLFERESDDGVRGWDASIKPVPRRLGTAATNRWLRDPVKSELMAPEQQSVPVTKAAARTNNASTSNTEKSNEMMLLNGRITAVRAEIKDLTNRLIVADPEGWANWVNKDAAGGQVTQRDITLFVGAELSAGRQLMLGPTAQRGEVHALEYTEDVSTNSEESATELKKRKRDMKDAPPTAEDAPPIPTATVPLTEFMDTGEGNLGTADVRGGNGWHTMFPTAEVENLVAPSSDHYPILVQLAPSVKTA