Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39956.t1 | AES70414.1 | 59.6 | 349 | 72 | 4 | 1 | 349 | 1 | 280 | 2.40E-102 | 382.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39956.t1 | O04244 | 27.9 | 136 | 94 | 2 | 83 | 216 | 6 | 139 | 4.1e-10 | 67.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39956.t1 | G7J017 | 59.6 | 349 | 72 | 4 | 1 | 349 | 1 | 280 | 1.7e-102 | 382.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39956.t1 | MTR_3g053920 | 59.026 | 349 | 74 | 4 | 1 | 349 | 1 | 280 | 6.88e-128 | 374 |
MS.gene39956.t1 | MTR_2g061500 | 84.496 | 129 | 20 | 0 | 1 | 129 | 1 | 129 | 1.10e-74 | 232 |
MS.gene39956.t1 | MTR_4g103530 | 82.105 | 95 | 17 | 0 | 55 | 149 | 1 | 95 | 4.77e-51 | 172 |
MS.gene39956.t1 | MTR_7g011710 | 69.412 | 85 | 26 | 0 | 55 | 139 | 1 | 85 | 5.10e-36 | 131 |
MS.gene39956.t1 | MTR_6g033215 | 33.333 | 171 | 112 | 1 | 31 | 199 | 124 | 294 | 9.03e-31 | 121 |
MS.gene39956.t1 | MTR_0010s0370 | 36.313 | 179 | 102 | 4 | 7 | 177 | 3 | 177 | 2.59e-29 | 114 |
MS.gene39956.t1 | MTR_0010s0350 | 36.313 | 179 | 102 | 4 | 7 | 177 | 3 | 177 | 2.59e-29 | 114 |
MS.gene39956.t1 | MTR_8g463110 | 55.208 | 96 | 43 | 0 | 403 | 498 | 194 | 289 | 3.65e-29 | 122 |
MS.gene39956.t1 | MTR_8g463110 | 62.281 | 114 | 41 | 1 | 292 | 403 | 1 | 114 | 1.92e-28 | 119 |
MS.gene39956.t1 | MTR_6g034215 | 47.863 | 117 | 58 | 1 | 385 | 498 | 177 | 293 | 5.09e-29 | 117 |
MS.gene39956.t1 | MTR_4g020630 | 52.632 | 95 | 45 | 0 | 404 | 498 | 131 | 225 | 5.81e-27 | 114 |
MS.gene39956.t1 | MTR_1g100687 | 41.935 | 93 | 54 | 0 | 404 | 496 | 133 | 225 | 7.73e-22 | 94.7 |
MS.gene39956.t1 | MTR_3g044860 | 36.792 | 106 | 41 | 1 | 404 | 509 | 87 | 166 | 3.05e-16 | 79.7 |
MS.gene39956.t1 | MTR_1g051330 | 36.170 | 94 | 59 | 1 | 403 | 496 | 349 | 441 | 2.57e-13 | 73.2 |
MS.gene39956.t1 | MTR_0042s0130 | 34.375 | 96 | 63 | 0 | 404 | 499 | 234 | 329 | 3.03e-13 | 71.2 |
MS.gene39956.t1 | MTR_1g036720 | 33.028 | 109 | 71 | 1 | 7 | 113 | 3 | 111 | 3.49e-13 | 66.2 |
MS.gene39956.t1 | MTR_6g009010 | 40.299 | 67 | 40 | 0 | 399 | 465 | 197 | 263 | 1.31e-11 | 65.5 |
MS.gene39956.t1 | MTR_3g024240 | 32.500 | 120 | 77 | 2 | 84 | 199 | 55 | 174 | 9.27e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39956.t1 | AT2G17920 | 26.027 | 219 | 144 | 5 | 8 | 216 | 9 | 219 | 2.02e-17 | 83.6 |
MS.gene39956.t1 | AT3G57587 | 28.873 | 142 | 97 | 2 | 77 | 216 | 80 | 219 | 9.69e-16 | 79.3 |
MS.gene39956.t1 | AT2G41590 | 29.114 | 158 | 102 | 3 | 67 | 216 | 64 | 219 | 1.00e-15 | 79.3 |
MS.gene39956.t1 | AT3G31430 | 27.273 | 209 | 144 | 4 | 11 | 215 | 107 | 311 | 3.65e-15 | 77.0 |
MS.gene39956.t1 | AT5G36228 | 27.039 | 233 | 126 | 5 | 8 | 227 | 32 | 233 | 1.65e-14 | 75.5 |
MS.gene39956.t1 | AT2G13450 | 27.174 | 184 | 128 | 4 | 35 | 215 | 38 | 218 | 2.24e-14 | 75.5 |
MS.gene39956.t1 | AT5G25200 | 26.455 | 189 | 123 | 4 | 36 | 216 | 39 | 219 | 7.86e-14 | 73.6 |
MS.gene39956.t1 | AT2G02103 | 26.984 | 189 | 122 | 4 | 36 | 216 | 39 | 219 | 8.13e-14 | 73.6 |
MS.gene39956.t1 | AT5G18636 | 26.455 | 189 | 123 | 4 | 36 | 216 | 39 | 219 | 8.45e-14 | 73.6 |
MS.gene39956.t1 | AT3G47920 | 28.873 | 142 | 97 | 2 | 77 | 216 | 9 | 148 | 2.01e-13 | 71.6 |
MS.gene39956.t1 | AT4G02000 | 27.941 | 136 | 94 | 2 | 83 | 216 | 6 | 139 | 3.30e-12 | 68.2 |
Find 142 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGACTCGGTTTCAAGGTTT+AGG | 0.239735 | 1.4:+58623204 | None:intergenic |
GCAGCTTGAACCGGGGTTTA+AGG | 0.252060 | 1.4:-58621204 | MS.gene39956:CDS |
CTGATGATGGTGTTAGAAAT+TGG | 0.263857 | 1.4:-58622593 | MS.gene39956:CDS |
ATTTGCTGCTGATGGGGATA+TGG | 0.268644 | 1.4:-58622100 | MS.gene39956:CDS |
ATTGAAGGATGTTGGATTTC+CGG | 0.275936 | 1.4:+58622416 | None:intergenic |
CCTATCCCTTGACCTACTTT+AGG | 0.278128 | 1.4:+58622855 | None:intergenic |
GTGATTCAAGGGCACAAAAC+TGG | 0.287367 | 1.4:+58622926 | None:intergenic |
CAAGTCCATGGTCTTCCATT+TGG | 0.307171 | 1.4:-58622888 | MS.gene39956:CDS |
CGACATGCGTTCGCTGAAAT+AGG | 0.325418 | 1.4:+58623115 | None:intergenic |
GATATGGGAAACAATGTAAT+AGG | 0.328449 | 1.4:-58622084 | MS.gene39956:CDS |
AGACTCGGTTTCAAGGTTTA+GGG | 0.335047 | 1.4:+58623205 | None:intergenic |
TCATAGCAGTGAGTTGGTTC+TGG | 0.337700 | 1.4:+58622376 | None:intergenic |
TGCTTGCAAAGTGCATCTTC+TGG | 0.344153 | 1.4:-58622292 | MS.gene39956:CDS |
CGCCACCAGCAGCATTGGTT+TGG | 0.349189 | 1.4:+58622481 | None:intergenic |
GCAGGTAGCCCGAGCACTAT+AGG | 0.370103 | 1.4:+58622222 | None:intergenic |
TTCTTGCATGCCTTGTTCAT+TGG | 0.374242 | 1.4:+58620809 | None:intergenic |
CCCACAAATCTTAACCTTGC+TGG | 0.383915 | 1.4:-58623254 | MS.gene39956:CDS |
TGTCACAGGTGCGGCTTGCT+TGG | 0.388808 | 1.4:-58622657 | MS.gene39956:CDS |
ATCCTTGAACACTGCTTGAT+AGG | 0.396899 | 1.4:-58623170 | MS.gene39956:CDS |
ATCATTGTAATAAAATCAAA+AGG | 0.397666 | 1.4:-58621088 | MS.gene39956:CDS |
AGGCGCAACACTGACAAGTA+TGG | 0.397885 | 1.4:+58621277 | None:intergenic |
TTTAGCATATGCTGCATTCT+GGG | 0.398491 | 1.4:+58622335 | None:intergenic |
CGCGGCACAGAGGCAGGGAT+GGG | 0.398696 | 1.4:+58622504 | None:intergenic |
AAGACATGTGGGAGTGGAAT+AGG | 0.405268 | 1.4:-58621112 | MS.gene39956:CDS |
GAATGCGTGGCAGCTTGAAC+CGG | 0.405871 | 1.4:-58621213 | MS.gene39956:CDS |
GTTTGGCGCGGCACAGAGGC+AGG | 0.413106 | 1.4:+58622498 | None:intergenic |
ACCAGCAAGGTTAAGATTTG+TGG | 0.415806 | 1.4:+58623253 | None:intergenic |
TGATGATGGTGTTAGAAATT+GGG | 0.422542 | 1.4:-58622592 | MS.gene39956:CDS |
CCAGACCGCCCTATAGTGCT+CGG | 0.425872 | 1.4:-58622231 | MS.gene39956:CDS |
GCAGGTATATCGCAGCCAAC+AGG | 0.430100 | 1.4:+58622447 | None:intergenic |
TCCCTTGACCTACTTTAGGT+TGG | 0.431376 | 1.4:+58622859 | None:intergenic |
GACCTATCAAGCAGTGTTCA+AGG | 0.434622 | 1.4:+58623168 | None:intergenic |
GCGAACGCATGTCGCGTGCC+TGG | 0.435880 | 1.4:-58623106 | MS.gene39956:CDS |
AAGCCGGTTTCACACAAGAT+TGG | 0.450238 | 1.4:-58622558 | MS.gene39956:CDS |
GTACCAATCTTGTGTGAAAC+CGG | 0.451896 | 1.4:+58622555 | None:intergenic |
TCTTGTGTGAAACCGGCTTA+AGG | 0.455891 | 1.4:+58622562 | None:intergenic |
GCGCGGCACAGAGGCAGGGA+TGG | 0.458014 | 1.4:+58622503 | None:intergenic |
GGCGCAAATGCTGCTCCTGT+TGG | 0.459054 | 1.4:-58622462 | MS.gene39956:CDS |
CTTCTGGCCTCTTCCTCTAC+AGG | 0.461221 | 1.4:-58622276 | MS.gene39956:CDS |
CGGTTCCTTTGAAGAAAGAA+TGG | 0.461408 | 1.4:-58622746 | MS.gene39956:CDS |
GTGCCTGGAAGCCAGTCAAA+AGG | 0.461780 | 1.4:-58623091 | MS.gene39956:CDS |
CCAGCAAGGTTAAGATTTGT+GGG | 0.465000 | 1.4:+58623254 | None:intergenic |
GTTAAGATTTGTGGGATCCA+TGG | 0.466327 | 1.4:+58623262 | None:intergenic |
GTTCGCTGAAATAGGCAAAC+TGG | 0.470508 | 1.4:+58623123 | None:intergenic |
GCGTCTCGTGTCCTTGATGA+AGG | 0.476940 | 1.4:-58623008 | MS.gene39956:CDS |
GGATTTCCGGTACCAGCAGC+AGG | 0.477987 | 1.4:+58622429 | None:intergenic |
TCAATCTCAAATGGAACAGC+AGG | 0.478918 | 1.4:+58622204 | None:intergenic |
GTGCGGCTTGCTTGGTCATA+CGG | 0.483738 | 1.4:-58622649 | MS.gene39956:CDS |
GCGGCACAGAGGCAGGGATG+GGG | 0.485237 | 1.4:+58622505 | None:intergenic |
ACAAAACTGGGAACGACACC+AGG | 0.487376 | 1.4:+58622939 | None:intergenic |
GGTTTCATCCAACCTAAAGT+AGG | 0.488608 | 1.4:-58622867 | MS.gene39956:CDS |
CGAAGTACCTGTAGAGGAAG+AGG | 0.488829 | 1.4:+58622269 | None:intergenic |
AATGCGTGGCAGCTTGAACC+GGG | 0.489082 | 1.4:-58621212 | MS.gene39956:CDS |
CCTAAAGTAGGTCAAGGGAT+AGG | 0.489538 | 1.4:-58622855 | MS.gene39956:CDS |
CCAGCAGCATTGGTTTGGCG+CGG | 0.489542 | 1.4:+58622486 | None:intergenic |
ATGGTTCGGAATTGAAGAAA+AGG | 0.493268 | 1.4:-58622155 | MS.gene39956:CDS |
TTTGCTGCTGATGGGGATAT+GGG | 0.496695 | 1.4:-58622099 | MS.gene39956:CDS |
TCATACGGACAAGGTGTGTC+CGG | 0.497073 | 1.4:-58622634 | MS.gene39956:CDS |
GGAGAACCATTTGCTGCTGA+TGG | 0.498253 | 1.4:-58622108 | MS.gene39956:CDS |
CAGGTAGCCCGAGCACTATA+GGG | 0.500656 | 1.4:+58622223 | None:intergenic |
CTAAAGTAGGTCAAGGGATA+GGG | 0.500860 | 1.4:-58622854 | MS.gene39956:CDS |
TGGTCTGACTTTGTCTGAAG+AGG | 0.501622 | 1.4:-58623234 | MS.gene39956:CDS |
CCGAGCACTATAGGGCGGTC+TGG | 0.505204 | 1.4:+58622231 | None:intergenic |
CTTGTTTCATAGCAGTGAGT+TGG | 0.508037 | 1.4:+58622370 | None:intergenic |
GCAAGGAAATGCAAGACATT+CGG | 0.509824 | 1.4:-58621049 | MS.gene39956:CDS |
CGCCAAACCAATGCTGCTGG+TGG | 0.513803 | 1.4:-58622483 | MS.gene39956:CDS |
TTAGGTTGGATGAAACCAAA+TGG | 0.515115 | 1.4:+58622873 | None:intergenic |
TCCGCACATAAAGATAACTT+TGG | 0.516698 | 1.4:+58621134 | None:intergenic |
TGATTCAAGGGCACAAAACT+GGG | 0.517706 | 1.4:+58622927 | None:intergenic |
TTAAGATTTGTGGGATCCAT+GGG | 0.519569 | 1.4:+58623263 | None:intergenic |
ACACGCCATTCTTTCTTCAA+AGG | 0.520389 | 1.4:+58622741 | None:intergenic |
ATTTGCGCCACCAGCAGCAT+TGG | 0.521878 | 1.4:+58622476 | None:intergenic |
CCGCGCCAAACCAATGCTGC+TGG | 0.521917 | 1.4:-58622486 | MS.gene39956:CDS |
GCGGTCTGGCAGCATATTAG+AGG | 0.524222 | 1.4:+58622245 | None:intergenic |
ATACGATCATTGAAGGATGT+TGG | 0.525082 | 1.4:+58622408 | None:intergenic |
CGTTTATGAACTTGAGGCCA+AGG | 0.529381 | 1.4:+58621251 | None:intergenic |
AGCAAGCATACGATCATTGA+AGG | 0.529590 | 1.4:+58622401 | None:intergenic |
AGGAGCTAGTTACTAACTCA+TGG | 0.534186 | 1.4:-58621184 | MS.gene39956:CDS |
TATGAGTTGGACTCTGATGA+TGG | 0.535904 | 1.4:-58622606 | MS.gene39956:CDS |
AGTGCATGAGGACAATGGTT+CGG | 0.537247 | 1.4:-58622169 | MS.gene39956:CDS |
ATCCAACCTAAAGTAGGTCA+AGG | 0.540339 | 1.4:-58622861 | MS.gene39956:CDS |
ATATCCCCATCAGCAGCAAA+TGG | 0.542146 | 1.4:+58622102 | None:intergenic |
GGGGTCTTGAAGCCAACGAT+TGG | 0.542402 | 1.4:+58622524 | None:intergenic |
GATATACCTGCTGCTGGTAC+CGG | 0.542864 | 1.4:-58622435 | MS.gene39956:CDS |
CGCATGTTCAACCTTCAGAA+TGG | 0.543074 | 1.4:-58622129 | MS.gene39956:CDS |
CTTTATGTGCGGAAGACATG+TGG | 0.545978 | 1.4:-58621124 | MS.gene39956:CDS |
TTGGGGAGCTGACCTTAAGC+CGG | 0.550680 | 1.4:-58622574 | MS.gene39956:CDS |
GCATAAGAGTGCTTGCTGAA+TGG | 0.552056 | 1.4:+58621156 | None:intergenic |
TGAACTTGAGGCCAAGGTGT+AGG | 0.552355 | 1.4:+58621257 | None:intergenic |
GGTCTGACTTTGTCTGAAGA+GGG | 0.553936 | 1.4:-58623233 | MS.gene39956:CDS |
AGCCACTCTGAGGCGCATAT+AGG | 0.554985 | 1.4:+58622779 | None:intergenic |
GAGAACCATTTGCTGCTGAT+GGG | 0.561514 | 1.4:-58622107 | MS.gene39956:CDS |
AGAGGCCGAAGTACCTGTAG+AGG | 0.562749 | 1.4:+58622263 | None:intergenic |
ATGCGTGGCAGCTTGAACCG+GGG | 0.563660 | 1.4:-58621211 | MS.gene39956:CDS |
TGCCTGGAAGCCAGTCAAAA+GGG | 0.564305 | 1.4:-58623090 | MS.gene39956:CDS |
CAAATGGTTCTCCATTCTGA+AGG | 0.565773 | 1.4:+58622118 | None:intergenic |
CAGACCGCCCTATAGTGCTC+GGG | 0.567187 | 1.4:-58622230 | MS.gene39956:CDS |
GTAACTAGCTCCTTAAACCC+CGG | 0.569868 | 1.4:+58621194 | None:intergenic |
GGCGCAACACTGACAAGTAT+GGG | 0.569959 | 1.4:+58621278 | None:intergenic |
GTACTGCTGCAACCAATCGT+TGG | 0.571005 | 1.4:-58622536 | MS.gene39956:CDS |
TCAGTGTTGCGCCTACACCT+TGG | 0.572430 | 1.4:-58621268 | MS.gene39956:CDS |
CTTGCTTGGTCATACGGACA+AGG | 0.574893 | 1.4:-58622643 | MS.gene39956:CDS |
CAGAGTGGCTATTGATGTCA+CGG | 0.576319 | 1.4:-58622766 | MS.gene39956:CDS |
AAATGTCGTTTATGAACTTG+AGG | 0.576587 | 1.4:+58621245 | None:intergenic |
TTTGGCGCGGCACAGAGGCA+GGG | 0.578514 | 1.4:+58622499 | None:intergenic |
GAGTCCAACTCATACAGCTC+CGG | 0.581105 | 1.4:+58622615 | None:intergenic |
CTCTTCCTCTACAGGTACTT+CGG | 0.581706 | 1.4:-58622268 | MS.gene39956:CDS |
ATGGGATAGTGATCAGAAGA+AGG | 0.585857 | 1.4:+58621296 | None:intergenic |
GTGCGGAAGACATGTGGGAG+TGG | 0.589143 | 1.4:-58621118 | MS.gene39956:CDS |
GCTAGTTACTAACTCATGGC+AGG | 0.590601 | 1.4:-58621180 | MS.gene39956:CDS |
TCATTGTAATAAAATCAAAA+GGG | 0.591564 | 1.4:-58621087 | MS.gene39956:CDS |
GGCTGCGATATACCTGCTGC+TGG | 0.599666 | 1.4:-58622441 | MS.gene39956:CDS |
ACAACCACGGACCTTCATCA+AGG | 0.599966 | 1.4:+58622997 | None:intergenic |
GCCAAAGTTATCTTTATGTG+CGG | 0.604967 | 1.4:-58621135 | MS.gene39956:CDS |
TGGCGTGTTCGTGCTAGTAA+CGG | 0.608633 | 1.4:-58622726 | MS.gene39956:CDS |
TCCAACCTAAAGTAGGTCAA+GGG | 0.620577 | 1.4:-58622860 | MS.gene39956:CDS |
GTTACGATCACAAAGTCTGT+TGG | 0.630755 | 1.4:-58623068 | MS.gene39956:CDS |
TTTATGTGCGGAAGACATGT+GGG | 0.631802 | 1.4:-58621123 | MS.gene39956:CDS |
CACGAGACGCATCCACCTTG+TGG | 0.636445 | 1.4:+58623021 | None:intergenic |
GTGTCCGGAGCTGTATGAGT+TGG | 0.640068 | 1.4:-58622619 | MS.gene39956:CDS |
TGCTATTGTTGAGACTCTTG+TGG | 0.642175 | 1.4:-58621321 | MS.gene39956:intron |
ATTGGTTTGGCGCGGCACAG+AGG | 0.646767 | 1.4:+58622494 | None:intergenic |
TGAAACCAAATGGAAGACCA+TGG | 0.650045 | 1.4:+58622883 | None:intergenic |
GATGATGGTGTTAGAAATTG+GGG | 0.652352 | 1.4:-58622591 | MS.gene39956:CDS |
GTTGTTTCAATTTCACCACA+AGG | 0.656998 | 1.4:-58623036 | MS.gene39956:CDS |
AATAAAGTTACCAATGAACA+AGG | 0.657390 | 1.4:-58620819 | MS.gene39956:CDS |
AAATAACGAGGAAGTGCATG+AGG | 0.657967 | 1.4:-58622181 | MS.gene39956:CDS |
GAGGAAGTGCATGAGGACAA+TGG | 0.662059 | 1.4:-58622174 | MS.gene39956:CDS |
GGACATCGAAGATTGTCGCA+AGG | 0.662937 | 1.4:-58621066 | MS.gene39956:CDS |
AGAACCATTTGCTGCTGATG+GGG | 0.663812 | 1.4:-58622106 | MS.gene39956:CDS |
ACTGGATTTCACGATCAGCA+AGG | 0.672093 | 1.4:+58623141 | None:intergenic |
GTTATGGATCGAATCAACCC+TGG | 0.674896 | 1.4:-58622957 | MS.gene39956:CDS |
TGAAAATTATCATACAACCA+CGG | 0.679439 | 1.4:+58622984 | None:intergenic |
GGTACTCTCAAGGCATACGA+TGG | 0.681865 | 1.4:-58622822 | MS.gene39956:CDS |
CAGACAAAGTCAGACCAGCA+AGG | 0.687776 | 1.4:+58623240 | None:intergenic |
GTTTCAATTTCACCACAAGG+TGG | 0.694224 | 1.4:-58623033 | MS.gene39956:CDS |
ATTTGAGATTGAAAATAACG+AGG | 0.703259 | 1.4:-58622193 | MS.gene39956:CDS |
GTGTCCTTGATGAAGGTCCG+TGG | 0.705004 | 1.4:-58623001 | MS.gene39956:CDS |
TGCCTATATGCGCCTCAGAG+TGG | 0.706841 | 1.4:-58622781 | MS.gene39956:CDS |
GTAGCCCGAGCACTATAGGG+CGG | 0.715033 | 1.4:+58622226 | None:intergenic |
TGACATCAATAGCCACTCTG+AGG | 0.720871 | 1.4:+58622769 | None:intergenic |
CAAAACTGGGAACGACACCA+GGG | 0.748480 | 1.4:+58622940 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATCATTGTAATAAAATCAAA+AGG | - | chr1.4:58622977-58622996 | MS.gene39956:CDS | 15.0% |
!! | TCATTGTAATAAAATCAAAA+GGG | - | chr1.4:58622978-58622997 | MS.gene39956:CDS | 15.0% |
!!! | CATTTTAAATATGAGAAATT+GGG | - | chr1.4:58621378-58621397 | MS.gene39956:intron | 15.0% |
!!! | TCATTTTAAATATGAGAAAT+TGG | - | chr1.4:58621377-58621396 | MS.gene39956:intron | 15.0% |
!!! | TGATAATTTTCATATTGTTA+TGG | - | chr1.4:58621092-58621111 | MS.gene39956:CDS | 15.0% |
!! | AGTATTATTTACAAGTTCAA+CGG | + | chr1.4:58622380-58622399 | None:intergenic | 20.0% |
! | AACTTCAAAAAAGAATGCAA+CGG | - | chr1.4:58623076-58623095 | MS.gene39956:CDS | 25.0% |
! | AATAAAGTTACCAATGAACA+AGG | - | chr1.4:58623246-58623265 | MS.gene39956:CDS | 25.0% |
! | GAACTTGTAAATAATACTCT+TGG | - | chr1.4:58622382-58622401 | MS.gene39956:CDS | 25.0% |
! | TAAATAATACTCTTGGCATT+TGG | - | chr1.4:58622389-58622408 | MS.gene39956:CDS | 25.0% |
! | TATACTTGGTTTAAAAGTCT+TGG | - | chr1.4:58622649-58622668 | MS.gene39956:CDS | 25.0% |
! | TGAAAATTATCATACAACCA+CGG | + | chr1.4:58621084-58621103 | None:intergenic | 25.0% |
!! | AAGACTTTTAAACCAAGTAT+AGG | + | chr1.4:58622650-58622669 | None:intergenic | 25.0% |
!! | AGACTTTTAAACCAAGTATA+GGG | + | chr1.4:58622649-58622668 | None:intergenic | 25.0% |
!! | ATTTGAGATTGAAAATAACG+AGG | - | chr1.4:58621872-58621891 | MS.gene39956:intron | 25.0% |
!!! | TCGTTATTTTCAATCTCAAA+TGG | + | chr1.4:58621873-58621892 | None:intergenic | 25.0% |
AAAACTCATTGGTACAAAGA+TGG | - | chr1.4:58623138-58623157 | MS.gene39956:CDS | 30.0% | |
AATGCAGCATATGCTAAAAA+AGG | - | chr1.4:58621735-58621754 | MS.gene39956:intron | 30.0% | |
ACATCTTGCTCATCAAAAAA+AGG | + | chr1.4:58622056-58622075 | None:intergenic | 30.0% | |
ATAGGAACAAATGTTAGTCA+TGG | - | chr1.4:58621999-58622018 | MS.gene39956:intron | 30.0% | |
CAAAAATCGATGTGATTCAA+GGG | + | chr1.4:58621153-58621172 | None:intergenic | 30.0% | |
GATATGGGAAACAATGTAAT+AGG | - | chr1.4:58621981-58622000 | MS.gene39956:intron | 30.0% | |
GCATATGCTAAAAAAGGTAA+CGG | - | chr1.4:58621741-58621760 | MS.gene39956:intron | 30.0% | |
TACAAAGTTCTTTCATGCTT+CGG | - | chr1.4:58623170-58623189 | MS.gene39956:CDS | 30.0% | |
TAGGAACAAATGTTAGTCAT+GGG | - | chr1.4:58622000-58622019 | MS.gene39956:intron | 30.0% | |
TCACTAAGGAATAAAAGATC+CGG | + | chr1.4:58622199-58622218 | None:intergenic | 30.0% | |
! | AAATGTCGTTTATGAACTTG+AGG | + | chr1.4:58622823-58622842 | None:intergenic | 30.0% |
! | TTTTGATGAGCAAGATGTAA+TGG | - | chr1.4:58622058-58622077 | MS.gene39956:intron | 30.0% |
!! | TGATGATGGTGTTAGAAATT+GGG | - | chr1.4:58621473-58621492 | MS.gene39956:intron | 30.0% |
AAATCACCAAAGATACACCA+CGG | + | chr1.4:58622505-58622524 | None:intergenic | 35.0% | |
AGAGTCTCAACAATAGCATT+TGG | + | chr1.4:58622742-58622761 | None:intergenic | 35.0% | |
AGGAACAAATGTTAGTCATG+GGG | - | chr1.4:58622001-58622020 | MS.gene39956:intron | 35.0% | |
ATACGATCATTGAAGGATGT+TGG | + | chr1.4:58621660-58621679 | None:intergenic | 35.0% | |
ATTAGGATAGCCATAATAGC+CGG | + | chr1.4:58622422-58622441 | None:intergenic | 35.0% | |
ATTGAAGGATGTTGGATTTC+CGG | + | chr1.4:58621652-58621671 | None:intergenic | 35.0% | |
CATCATCAAGAGAAGTTATG+CGG | + | chr1.4:58623218-58623237 | None:intergenic | 35.0% | |
CCAAAAATCGATGTGATTCA+AGG | + | chr1.4:58621154-58621173 | None:intergenic | 35.0% | |
GCCAAAGTTATCTTTATGTG+CGG | - | chr1.4:58622930-58622949 | MS.gene39956:CDS | 35.0% | |
GTATAGGGATATCCTTCAAT+CGG | + | chr1.4:58622634-58622653 | None:intergenic | 35.0% | |
TATAGGGATATCCTTCAATC+GGG | + | chr1.4:58622633-58622652 | None:intergenic | 35.0% | |
TATTATGGCTATCCTAATGG+AGG | - | chr1.4:58622424-58622443 | MS.gene39956:CDS | 35.0% | |
TCCGCACATAAAGATAACTT+TGG | + | chr1.4:58622934-58622953 | None:intergenic | 35.0% | |
TTGAAGGATATCCCTATACT+TGG | - | chr1.4:58622635-58622654 | MS.gene39956:CDS | 35.0% | |
TTTAGCATATGCTGCATTCT+GGG | + | chr1.4:58621733-58621752 | None:intergenic | 35.0% | |
TTTCCCAAGATGATGCTTAT+TGG | - | chr1.4:58623103-58623122 | MS.gene39956:CDS | 35.0% | |
! | ATGGTTCGGAATTGAAGAAA+AGG | - | chr1.4:58621910-58621929 | MS.gene39956:intron | 35.0% |
! | GATAGCAGTATTTTCAGACT+CGG | + | chr1.4:58620878-58620897 | None:intergenic | 35.0% |
! | GATGATGGTGTTAGAAATTG+GGG | - | chr1.4:58621474-58621493 | MS.gene39956:intron | 35.0% |
! | GTTGTTTCAATTTCACCACA+AGG | - | chr1.4:58621029-58621048 | MS.gene39956:intron | 35.0% |
! | TTATGCGGTTTACCTTTTTC+CGG | + | chr1.4:58623203-58623222 | None:intergenic | 35.0% |
! | TTTTAGCATATGCTGCATTC+TGG | + | chr1.4:58621734-58621753 | None:intergenic | 35.0% |
!! | ACTTCTCTTGATGATGATGT+AGG | - | chr1.4:58623222-58623241 | MS.gene39956:CDS | 35.0% |
!! | ATTTTTGCTATGAGAATGCG+TGG | - | chr1.4:58622839-58622858 | MS.gene39956:CDS | 35.0% |
!! | CTGATGATGGTGTTAGAAAT+TGG | - | chr1.4:58621472-58621491 | MS.gene39956:intron | 35.0% |
!! | GAAATTGAGTTGAGAGTTGT+CGG | + | chr1.4:58622477-58622496 | None:intergenic | 35.0% |
!! | TATTTTCAGACTCGGTTTCA+AGG | + | chr1.4:58620870-58620889 | None:intergenic | 35.0% |
!! | TGGTGATTTTAACGACATCT+TGG | - | chr1.4:58622516-58622535 | MS.gene39956:CDS | 35.0% |
!! | TTAGGTTGGATGAAACCAAA+TGG | + | chr1.4:58621195-58621214 | None:intergenic | 35.0% |
!!! | AATTGGGTGTTTTTTGTCAC+AGG | - | chr1.4:58621394-58621413 | MS.gene39956:intron | 35.0% |
!!! | CCTTGAATCACATCGATTTT+TGG | - | chr1.4:58621151-58621170 | MS.gene39956:CDS | 35.0% |
AACAAATGTTAGTCATGGGG+GGG | - | chr1.4:58622004-58622023 | MS.gene39956:intron | 40.0% | |
ACACGCCATTCTTTCTTCAA+AGG | + | chr1.4:58621327-58621346 | None:intergenic | 40.0% | |
ACCAGCAAGGTTAAGATTTG+TGG | + | chr1.4:58620815-58620834 | None:intergenic | 40.0% | |
ACGCCAATAAGCATCATCTT+GGG | + | chr1.4:58623109-58623128 | None:intergenic | 40.0% | |
AGCAAGCATACGATCATTGA+AGG | + | chr1.4:58621667-58621686 | None:intergenic | 40.0% | |
AGGAGCTAGTTACTAACTCA+TGG | - | chr1.4:58622881-58622900 | MS.gene39956:CDS | 40.0% | |
ATCCAACCTAAAGTAGGTCA+AGG | - | chr1.4:58621204-58621223 | MS.gene39956:CDS | 40.0% | |
ATCCTTGAACACTGCTTGAT+AGG | - | chr1.4:58620895-58620914 | MS.gene39956:intron | 40.0% | |
ATGGGATAGTGATCAGAAGA+AGG | + | chr1.4:58622772-58622791 | None:intergenic | 40.0% | |
CAAATGGTTCTCCATTCTGA+AGG | + | chr1.4:58621950-58621969 | None:intergenic | 40.0% | |
CAACTCTCAACTCAATTTCC+AGG | - | chr1.4:58622478-58622497 | MS.gene39956:CDS | 40.0% | |
CAGACCTTAAGTACCTAGTT+CGG | - | chr1.4:58622164-58622183 | MS.gene39956:CDS | 40.0% | |
CCAAAATAAAGCTAAACCCC+CGG | + | chr1.4:58622308-58622327 | None:intergenic | 40.0% | |
CCAGCAAGGTTAAGATTTGT+GGG | + | chr1.4:58620814-58620833 | None:intergenic | 40.0% | |
CGCTCTTCATGGCTTATAAA+TGG | - | chr1.4:58622568-58622587 | MS.gene39956:CDS | 40.0% | |
CTAAAGTAGGTCAAGGGATA+GGG | - | chr1.4:58621211-58621230 | MS.gene39956:CDS | 40.0% | |
CTTGGACACTAGTGAGAAAA+GGG | - | chr1.4:58622534-58622553 | MS.gene39956:CDS | 40.0% | |
CTTGTTTCATAGCAGTGAGT+TGG | + | chr1.4:58621698-58621717 | None:intergenic | 40.0% | |
GAACAAATGTTAGTCATGGG+GGG | - | chr1.4:58622003-58622022 | MS.gene39956:intron | 40.0% | |
GAAGAACTTCGTTGTTTGCT+TGG | - | chr1.4:58622244-58622263 | MS.gene39956:CDS | 40.0% | |
GCAAGGAAATGCAAGACATT+CGG | - | chr1.4:58623016-58623035 | MS.gene39956:CDS | 40.0% | |
GGAACAAATGTTAGTCATGG+GGG | - | chr1.4:58622002-58622021 | MS.gene39956:intron | 40.0% | |
GGCTATTATGGCTATCCTAA+TGG | - | chr1.4:58622421-58622440 | MS.gene39956:CDS | 40.0% | |
GGTTTCATCCAACCTAAAGT+AGG | - | chr1.4:58621198-58621217 | MS.gene39956:CDS | 40.0% | |
GTACCAATCTTGTGTGAAAC+CGG | + | chr1.4:58621513-58621532 | None:intergenic | 40.0% | |
GTTACGATCACAAAGTCTGT+TGG | - | chr1.4:58620997-58621016 | MS.gene39956:intron | 40.0% | |
GTTTCAATTTCACCACAAGG+TGG | - | chr1.4:58621032-58621051 | MS.gene39956:intron | 40.0% | |
TCAATCTCAAATGGAACAGC+AGG | + | chr1.4:58621864-58621883 | None:intergenic | 40.0% | |
TCCAACCTAAAGTAGGTCAA+GGG | - | chr1.4:58621205-58621224 | MS.gene39956:CDS | 40.0% | |
TCTTGGACACTAGTGAGAAA+AGG | - | chr1.4:58622533-58622552 | MS.gene39956:CDS | 40.0% | |
TGAAACCAAATGGAAGACCA+TGG | + | chr1.4:58621185-58621204 | None:intergenic | 40.0% | |
TGCTATTGTTGAGACTCTTG+TGG | - | chr1.4:58622744-58622763 | MS.gene39956:CDS | 40.0% | |
TTGGACACTAGTGAGAAAAG+GGG | - | chr1.4:58622535-58622554 | MS.gene39956:CDS | 40.0% | |
TTGTCGGAGAAAATTCCAAG+CGG | + | chr1.4:58622461-58622480 | None:intergenic | 40.0% | |
TTTATGTGCGGAAGACATGT+GGG | - | chr1.4:58622942-58622961 | MS.gene39956:CDS | 40.0% | |
! | AAATAACGAGGAAGTGCATG+AGG | - | chr1.4:58621884-58621903 | MS.gene39956:intron | 40.0% |
! | AGACTCGGTTTCAAGGTTTA+GGG | + | chr1.4:58620863-58620882 | None:intergenic | 40.0% |
! | CGGTTCCTTTGAAGAAAGAA+TGG | - | chr1.4:58621319-58621338 | MS.gene39956:intron | 40.0% |
! | GAGTTTTCTAGGTACTCTCA+AGG | - | chr1.4:58621233-58621252 | MS.gene39956:CDS | 40.0% |
! | GCGCACTTGCTAATGATTTA+TGG | - | chr1.4:58622704-58622723 | MS.gene39956:CDS | 40.0% |
! | TATGAGTTGGACTCTGATGA+TGG | - | chr1.4:58621459-58621478 | MS.gene39956:intron | 40.0% |
! | TATGCGGTTTACCTTTTTCC+GGG | + | chr1.4:58623202-58623221 | None:intergenic | 40.0% |
! | TGATTCAAGGGCACAAAACT+GGG | + | chr1.4:58621141-58621160 | None:intergenic | 40.0% |
! | TTAAGGTCTGGAATTGCACT+CGG | + | chr1.4:58622154-58622173 | None:intergenic | 40.0% |
! | TTCTTGCATGCCTTGTTCAT+TGG | + | chr1.4:58623259-58623278 | None:intergenic | 40.0% |
AAGACATGTGGGAGTGGAAT+AGG | - | chr1.4:58622953-58622972 | MS.gene39956:CDS | 45.0% | |
ACTGGATTTCACGATCAGCA+AGG | + | chr1.4:58620927-58620946 | None:intergenic | 45.0% | |
AGTGCATGAGGACAATGGTT+CGG | - | chr1.4:58621896-58621915 | MS.gene39956:intron | 45.0% | |
ATATCCCCATCAGCAGCAAA+TGG | + | chr1.4:58621966-58621985 | None:intergenic | 45.0% | |
CAAGTCCATGGTCTTCCATT+TGG | - | chr1.4:58621177-58621196 | MS.gene39956:CDS | 45.0% | |
CAGAGTGGCTATTGATGTCA+CGG | - | chr1.4:58621299-58621318 | MS.gene39956:CDS | 45.0% | |
CCCACAAATCTTAACCTTGC+TGG | - | chr1.4:58620811-58620830 | MS.gene39956:CDS | 45.0% | |
CCTAAAGTAGGTCAAGGGAT+AGG | - | chr1.4:58621210-58621229 | MS.gene39956:CDS | 45.0% | |
CCTATCCCTTGACCTACTTT+AGG | + | chr1.4:58621213-58621232 | None:intergenic | 45.0% | |
CGAACTAGGTACTTAAGGTC+TGG | + | chr1.4:58622166-58622185 | None:intergenic | 45.0% | |
CGCATGTTCAACCTTCAGAA+TGG | - | chr1.4:58621936-58621955 | MS.gene39956:intron | 45.0% | |
CGTTTATGAACTTGAGGCCA+AGG | + | chr1.4:58622817-58622836 | None:intergenic | 45.0% | |
CTAAACTCATTTGCCTAGGC+AGG | + | chr1.4:58622102-58622121 | None:intergenic | 45.0% | |
CTCTTCCTCTACAGGTACTT+CGG | - | chr1.4:58621797-58621816 | MS.gene39956:intron | 45.0% | |
CTTTATGTGCGGAAGACATG+TGG | - | chr1.4:58622941-58622960 | MS.gene39956:CDS | 45.0% | |
GACCTATCAAGCAGTGTTCA+AGG | + | chr1.4:58620900-58620919 | None:intergenic | 45.0% | |
GACGCCAATAAGCATCATCT+TGG | + | chr1.4:58623110-58623129 | None:intergenic | 45.0% | |
GATGAGCAAGATGTAATGGC+AGG | - | chr1.4:58622062-58622081 | MS.gene39956:intron | 45.0% | |
GCCACTAAACTCATTTGCCT+AGG | + | chr1.4:58622106-58622125 | None:intergenic | 45.0% | |
GCCTAGGCAAATGAGTTTAG+TGG | - | chr1.4:58622102-58622121 | MS.gene39956:CDS | 45.0% | |
GCTAGTTACTAACTCATGGC+AGG | - | chr1.4:58622885-58622904 | MS.gene39956:CDS | 45.0% | |
GGCAAATGAGTTTAGTGGCA+TGG | - | chr1.4:58622107-58622126 | MS.gene39956:CDS | 45.0% | |
GGTCTGACTTTGTCTGAAGA+GGG | - | chr1.4:58620832-58620851 | MS.gene39956:intron | 45.0% | |
GTAACTAGCTCCTTAAACCC+CGG | + | chr1.4:58622874-58622893 | None:intergenic | 45.0% | |
GTCAACGCGCTAAAACTCAT+TGG | - | chr1.4:58623127-58623146 | MS.gene39956:CDS | 45.0% | |
GTTATGGATCGAATCAACCC+TGG | - | chr1.4:58621108-58621127 | MS.gene39956:CDS | 45.0% | |
GTTCGCTGAAATAGGCAAAC+TGG | + | chr1.4:58620945-58620964 | None:intergenic | 45.0% | |
GTTTAGTGGCATGGAATTGC+CGG | - | chr1.4:58622116-58622135 | MS.gene39956:CDS | 45.0% | |
TCCCTTGACCTACTTTAGGT+TGG | + | chr1.4:58621209-58621228 | None:intergenic | 45.0% | |
TGACATCAATAGCCACTCTG+AGG | + | chr1.4:58621299-58621318 | None:intergenic | 45.0% | |
TGCTTGCAAAGTGCATCTTC+TGG | - | chr1.4:58621773-58621792 | MS.gene39956:intron | 45.0% | |
TGGACACTAGTGAGAAAAGG+GGG | - | chr1.4:58622536-58622555 | MS.gene39956:CDS | 45.0% | |
TGGTCTGACTTTGTCTGAAG+AGG | - | chr1.4:58620831-58620850 | MS.gene39956:intron | 45.0% | |
TGTGAGCTAGAGTCTCACTA+AGG | + | chr1.4:58622213-58622232 | None:intergenic | 45.0% | |
TTATCTGACGTCCCGATTGA+AGG | - | chr1.4:58622619-58622638 | MS.gene39956:CDS | 45.0% | |
TTTAGTGGCATGGAATTGCC+GGG | - | chr1.4:58622117-58622136 | MS.gene39956:CDS | 45.0% | |
TTTGCTGCTGATGGGGATAT+GGG | - | chr1.4:58621966-58621985 | MS.gene39956:intron | 45.0% | |
! | AAGCCGGTTTCACACAAGAT+TGG | - | chr1.4:58621507-58621526 | MS.gene39956:intron | 45.0% |
! | AGAACCATTTGCTGCTGATG+GGG | - | chr1.4:58621959-58621978 | MS.gene39956:intron | 45.0% |
! | AGTGCCGAACTAGGTACTTA+AGG | + | chr1.4:58622171-58622190 | None:intergenic | 45.0% |
! | ATTTGCTGCTGATGGGGATA+TGG | - | chr1.4:58621965-58621984 | MS.gene39956:intron | 45.0% |
! | CAAGGGATAGGGAGTTTTCT+AGG | - | chr1.4:58621222-58621241 | MS.gene39956:CDS | 45.0% |
! | CAGACTCGGTTTCAAGGTTT+AGG | + | chr1.4:58620864-58620883 | None:intergenic | 45.0% |
! | GAGAACCATTTGCTGCTGAT+GGG | - | chr1.4:58621958-58621977 | MS.gene39956:intron | 45.0% |
! | GTGATCGTAACCCTTTTGAC+TGG | + | chr1.4:58620988-58621007 | None:intergenic | 45.0% |
! | GTGATTCAAGGGCACAAAAC+TGG | + | chr1.4:58621142-58621161 | None:intergenic | 45.0% |
! | TAAGGTCTGGAATTGCACTC+GGG | + | chr1.4:58622153-58622172 | None:intergenic | 45.0% |
! | TATAAGCCATGAAGAGCGCA+TGG | + | chr1.4:58622566-58622585 | None:intergenic | 45.0% |
! | TCTTGTGTGAAACCGGCTTA+AGG | + | chr1.4:58621506-58621525 | None:intergenic | 45.0% |
!! | GCATAAGAGTGCTTGCTGAA+TGG | + | chr1.4:58622912-58622931 | None:intergenic | 45.0% |
!! | TCATAGCAGTGAGTTGGTTC+TGG | + | chr1.4:58621692-58621711 | None:intergenic | 45.0% |
!!! | CCGGGGGTTTAGCTTTATTT+TGG | - | chr1.4:58622305-58622324 | MS.gene39956:CDS | 45.0% |
!!! | GATTTTTGGCTGCAAGTCCA+TGG | - | chr1.4:58621165-58621184 | MS.gene39956:CDS | 45.0% |
!!! | GGTGTTTTTTGTCACAGGTG+CGG | - | chr1.4:58621399-58621418 | MS.gene39956:intron | 45.0% |
AATGGCAGGTCCTGATGATC+AGG | - | chr1.4:58622076-58622095 | MS.gene39956:intron | 50.0% | |
ACAAAACTGGGAACGACACC+AGG | + | chr1.4:58621129-58621148 | None:intergenic | 50.0% | |
ACAACCACGGACCTTCATCA+AGG | + | chr1.4:58621071-58621090 | None:intergenic | 50.0% | |
ACATTCGGCTGCATGTTACC+GGG | - | chr1.4:58623031-58623050 | MS.gene39956:CDS | 50.0% | |
AGGCGCAACACTGACAAGTA+TGG | + | chr1.4:58622791-58622810 | None:intergenic | 50.0% | |
CAAAACTGGGAACGACACCA+GGG | + | chr1.4:58621128-58621147 | None:intergenic | 50.0% | |
CAACTCAATTTCCAGGTCCG+TGG | - | chr1.4:58622485-58622504 | MS.gene39956:CDS | 50.0% | |
CAGACAAAGTCAGACCAGCA+AGG | + | chr1.4:58620828-58620847 | None:intergenic | 50.0% | |
CCTAGTTCGGCACTTCAATC+CGG | - | chr1.4:58622177-58622196 | MS.gene39956:CDS | 50.0% | |
CGACATGCGTTCGCTGAAAT+AGG | + | chr1.4:58620953-58620972 | None:intergenic | 50.0% | |
CGTCGAGCTGTTCTTGATTC+AGG | - | chr1.4:58622595-58622614 | MS.gene39956:CDS | 50.0% | |
CTTGCTTGGTCATACGGACA+AGG | - | chr1.4:58621422-58621441 | MS.gene39956:intron | 50.0% | |
CTTGGCATTTGGCGTCTTAC+CGG | - | chr1.4:58622400-58622419 | MS.gene39956:CDS | 50.0% | |
GACATTCGGCTGCATGTTAC+CGG | - | chr1.4:58623030-58623049 | MS.gene39956:CDS | 50.0% | |
GAGTCCAACTCATACAGCTC+CGG | + | chr1.4:58621453-58621472 | None:intergenic | 50.0% | |
GATATACCTGCTGCTGGTAC+CGG | - | chr1.4:58621630-58621649 | MS.gene39956:intron | 50.0% | |
GCTGTTCTACGACCTCCATT+AGG | + | chr1.4:58622439-58622458 | None:intergenic | 50.0% | |
GGACATCGAAGATTGTCGCA+AGG | - | chr1.4:58622999-58623018 | MS.gene39956:CDS | 50.0% | |
GGCGCAACACTGACAAGTAT+GGG | + | chr1.4:58622790-58622809 | None:intergenic | 50.0% | |
GGTACTCTCAAGGCATACGA+TGG | - | chr1.4:58621243-58621262 | MS.gene39956:CDS | 50.0% | |
GTACTGCTGCAACCAATCGT+TGG | - | chr1.4:58621529-58621548 | MS.gene39956:intron | 50.0% | |
TCATACGGACAAGGTGTGTC+CGG | - | chr1.4:58621431-58621450 | MS.gene39956:intron | 50.0% | |
TGAACTTGAGGCCAAGGTGT+AGG | + | chr1.4:58622811-58622830 | None:intergenic | 50.0% | |
TGCCTGGAAGCCAGTCAAAA+GGG | - | chr1.4:58620975-58620994 | MS.gene39956:intron | 50.0% | |
TGCTTTCATGTAGACCGCAC+CGG | - | chr1.4:58622277-58622296 | MS.gene39956:CDS | 50.0% | |
TGGCGTGTTCGTGCTAGTAA+CGG | - | chr1.4:58621339-58621358 | MS.gene39956:intron | 50.0% | |
TTAGTGGCATGGAATTGCCG+GGG | - | chr1.4:58622118-58622137 | MS.gene39956:CDS | 50.0% | |
! | CGAAGTACCTGTAGAGGAAG+AGG | + | chr1.4:58621799-58621818 | None:intergenic | 50.0% |
! | GAGGAAGTGCATGAGGACAA+TGG | - | chr1.4:58621891-58621910 | MS.gene39956:intron | 50.0% |
! | GGAGAACCATTTGCTGCTGA+TGG | - | chr1.4:58621957-58621976 | MS.gene39956:intron | 50.0% |
! | TGGCGTCTTACCGGCTATTA+TGG | - | chr1.4:58622409-58622428 | MS.gene39956:CDS | 50.0% |
!! | CATGCGATTTTGATCCTCCC+CGG | + | chr1.4:58623052-58623071 | None:intergenic | 50.0% |
!!! | AACCCTTTTGACTGGCTTCC+AGG | + | chr1.4:58620980-58620999 | None:intergenic | 50.0% |
AACCTTTCTTCCACCGCACG+CGG | + | chr1.4:58622679-58622698 | None:intergenic | 55.0% | |
AATGCGTGGCAGCTTGAACC+GGG | - | chr1.4:58622853-58622872 | MS.gene39956:CDS | 55.0% | |
ATTTGCGCCACCAGCAGCAT+TGG | + | chr1.4:58621592-58621611 | None:intergenic | 55.0% | |
CAGGTAGCCCGAGCACTATA+GGG | + | chr1.4:58621845-58621864 | None:intergenic | 55.0% | |
CATTCGGCTGCATGTTACCG+GGG | - | chr1.4:58623032-58623051 | MS.gene39956:CDS | 55.0% | |
CCAAAGATACACCACGGACC+TGG | + | chr1.4:58622499-58622518 | None:intergenic | 55.0% | |
CCAGGTCCGTGGTGTATCTT+TGG | - | chr1.4:58622496-58622515 | MS.gene39956:CDS | 55.0% | |
CTTCTGGCCTCTTCCTCTAC+AGG | - | chr1.4:58621789-58621808 | MS.gene39956:intron | 55.0% | |
GAATGCGTGGCAGCTTGAAC+CGG | - | chr1.4:58622852-58622871 | MS.gene39956:CDS | 55.0% | |
GCAGCTTGAACCGGGGTTTA+AGG | - | chr1.4:58622861-58622880 | MS.gene39956:CDS | 55.0% | |
GCAGGTATATCGCAGCCAAC+AGG | + | chr1.4:58621621-58621640 | None:intergenic | 55.0% | |
GCGGTCTGGCAGCATATTAG+AGG | + | chr1.4:58621823-58621842 | None:intergenic | 55.0% | |
GCGTCTCGTGTCCTTGATGA+AGG | - | chr1.4:58621057-58621076 | MS.gene39956:CDS | 55.0% | |
GGGGTCTTGAAGCCAACGAT+TGG | + | chr1.4:58621544-58621563 | None:intergenic | 55.0% | |
GTGCCTGGAAGCCAGTCAAA+AGG | - | chr1.4:58620974-58620993 | MS.gene39956:intron | 55.0% | |
GTGTCCGGAGCTGTATGAGT+TGG | - | chr1.4:58621446-58621465 | MS.gene39956:intron | 55.0% | |
GTGTCCTTGATGAAGGTCCG+TGG | - | chr1.4:58621064-58621083 | MS.gene39956:CDS | 55.0% | |
TCAGTGTTGCGCCTACACCT+TGG | - | chr1.4:58622797-58622816 | MS.gene39956:CDS | 55.0% | |
TGCCTATATGCGCCTCAGAG+TGG | - | chr1.4:58621284-58621303 | MS.gene39956:CDS | 55.0% | |
TTCATGCTTCGGCAACAGCC+CGG | - | chr1.4:58623181-58623200 | MS.gene39956:CDS | 55.0% | |
TTCGGCAACAGCCCGGAAAA+AGG | - | chr1.4:58623188-58623207 | MS.gene39956:CDS | 55.0% | |
TTGGGGAGCTGACCTTAAGC+CGG | - | chr1.4:58621491-58621510 | MS.gene39956:intron | 55.0% | |
! | AGAGGCCGAAGTACCTGTAG+AGG | + | chr1.4:58621805-58621824 | None:intergenic | 55.0% |
! | GTGCGGCTTGCTTGGTCATA+CGG | - | chr1.4:58621416-58621435 | MS.gene39956:intron | 55.0% |
!! | AGCCACTCTGAGGCGCATAT+AGG | + | chr1.4:58621289-58621308 | None:intergenic | 55.0% |
!! | CCGGATTGAAGTGCCGAACT+AGG | + | chr1.4:58622180-58622199 | None:intergenic | 55.0% |
ACCTTTCTTCCACCGCACGC+GGG | + | chr1.4:58622678-58622697 | None:intergenic | 60.0% | |
AGCTAAACCCCCGGCTCTTC+CGG | + | chr1.4:58622299-58622318 | None:intergenic | 60.0% | |
ATGCGTGGCAGCTTGAACCG+GGG | - | chr1.4:58622854-58622873 | MS.gene39956:CDS | 60.0% | |
CACGAGACGCATCCACCTTG+TGG | + | chr1.4:58621047-58621066 | None:intergenic | 60.0% | |
CAGACCGCCCTATAGTGCTC+GGG | - | chr1.4:58621835-58621854 | MS.gene39956:intron | 60.0% | |
CCAGACCGCCCTATAGTGCT+CGG | - | chr1.4:58621834-58621853 | MS.gene39956:intron | 60.0% | |
CCTAGGCAGGCCTGATCATC+AGG | + | chr1.4:58622089-58622108 | None:intergenic | 60.0% | |
CCTGATGATCAGGCCTGCCT+AGG | - | chr1.4:58622086-58622105 | MS.gene39956:CDS | 60.0% | |
CGCCAAACCAATGCTGCTGG+TGG | - | chr1.4:58621582-58621601 | MS.gene39956:intron | 60.0% | |
GAGGTCGTAGAACAGCCGCT+TGG | - | chr1.4:58622443-58622462 | MS.gene39956:CDS | 60.0% | |
GCAGGTAGCCCGAGCACTAT+AGG | + | chr1.4:58621846-58621865 | None:intergenic | 60.0% | |
GCATGGAATTGCCGGGGTGT+AGG | - | chr1.4:58622124-58622143 | MS.gene39956:CDS | 60.0% | |
GGATTTCCGGTACCAGCAGC+AGG | + | chr1.4:58621639-58621658 | None:intergenic | 60.0% | |
GGCGCAAATGCTGCTCCTGT+TGG | - | chr1.4:58621603-58621622 | MS.gene39956:intron | 60.0% | |
GGCTGCGATATACCTGCTGC+TGG | - | chr1.4:58621624-58621643 | MS.gene39956:intron | 60.0% | |
GTAGCCCGAGCACTATAGGG+CGG | + | chr1.4:58621842-58621861 | None:intergenic | 60.0% | |
GTGCGGAAGACATGTGGGAG+TGG | - | chr1.4:58622947-58622966 | MS.gene39956:CDS | 60.0% | |
! | TGTCACAGGTGCGGCTTGCT+TGG | - | chr1.4:58621408-58621427 | MS.gene39956:intron | 60.0% |
!! | ATTGGTTTGGCGCGGCACAG+AGG | + | chr1.4:58621574-58621593 | None:intergenic | 60.0% |
!! | CCAGCAGCATTGGTTTGGCG+CGG | + | chr1.4:58621582-58621601 | None:intergenic | 60.0% |
!! | CGCCACCAGCAGCATTGGTT+TGG | + | chr1.4:58621587-58621606 | None:intergenic | 60.0% |
AAGTCTTGGCACCCCGCGTG+CGG | - | chr1.4:58622663-58622682 | MS.gene39956:CDS | 65.0% | |
CACTCGGGCTACCTACACCC+CGG | + | chr1.4:58622138-58622157 | None:intergenic | 65.0% | |
CCGAGCACTATAGGGCGGTC+TGG | + | chr1.4:58621837-58621856 | None:intergenic | 65.0% | |
CCGCGCCAAACCAATGCTGC+TGG | - | chr1.4:58621579-58621598 | MS.gene39956:intron | 65.0% | |
CCTTTCTTCCACCGCACGCG+GGG | + | chr1.4:58622677-58622696 | None:intergenic | 65.0% | |
GGCGCACCATGCGCTCTTCA+TGG | - | chr1.4:58622557-58622576 | MS.gene39956:CDS | 65.0% | |
GTAGACCGCACCGGAAGAGC+CGG | - | chr1.4:58622286-58622305 | MS.gene39956:CDS | 65.0% | |
TAGACCGCACCGGAAGAGCC+GGG | - | chr1.4:58622287-58622306 | MS.gene39956:CDS | 65.0% | |
TCGGCTGCATGTTACCGGGG+AGG | - | chr1.4:58623035-58623054 | MS.gene39956:CDS | 65.0% | |
TTTGGCGCGGCACAGAGGCA+GGG | + | chr1.4:58621569-58621588 | None:intergenic | 65.0% | |
AACCCCCGGCTCTTCCGGTG+CGG | + | chr1.4:58622294-58622313 | None:intergenic | 70.0% | |
AGACCGCACCGGAAGAGCCG+GGG | - | chr1.4:58622288-58622307 | MS.gene39956:CDS | 70.0% | |
CCCCGCGTGCGGTGGAAGAA+AGG | - | chr1.4:58622674-58622693 | MS.gene39956:CDS | 70.0% | |
CGCGGCACAGAGGCAGGGAT+GGG | + | chr1.4:58621564-58621583 | None:intergenic | 70.0% | |
GCGAACGCATGTCGCGTGCC+TGG | - | chr1.4:58620959-58620978 | MS.gene39956:intron | 70.0% | |
GCGGCACAGAGGCAGGGATG+GGG | + | chr1.4:58621563-58621582 | None:intergenic | 70.0% | |
GTTTGGCGCGGCACAGAGGC+AGG | + | chr1.4:58621570-58621589 | None:intergenic | 70.0% | |
GACCGCACCGGAAGAGCCGG+GGG | - | chr1.4:58622289-58622308 | MS.gene39956:CDS | 75.0% | |
GCGCGGCACAGAGGCAGGGA+TGG | + | chr1.4:58621565-58621584 | None:intergenic | 75.0% | |
TCTTGGCACCCCGCGTGCGG+TGG | - | chr1.4:58622666-58622685 | MS.gene39956:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 58620805 | 58623282 | 58620805 | ID=MS.gene39956 |
chr1.4 | mRNA | 58620805 | 58623282 | 58620805 | ID=MS.gene39956.t1;Parent=MS.gene39956 |
chr1.4 | exon | 58622077 | 58623282 | 58622077 | ID=MS.gene39956.t1.exon1;Parent=MS.gene39956.t1 |
chr1.4 | CDS | 58622077 | 58623282 | 58622077 | ID=cds.MS.gene39956.t1;Parent=MS.gene39956.t1 |
chr1.4 | exon | 58621043 | 58621330 | 58621043 | ID=MS.gene39956.t1.exon2;Parent=MS.gene39956.t1 |
chr1.4 | CDS | 58621043 | 58621330 | 58621043 | ID=cds.MS.gene39956.t1;Parent=MS.gene39956.t1 |
chr1.4 | exon | 58620805 | 58620843 | 58620805 | ID=MS.gene39956.t1.exon3;Parent=MS.gene39956.t1 |
chr1.4 | CDS | 58620805 | 58620843 | 58620805 | ID=cds.MS.gene39956.t1;Parent=MS.gene39956.t1 |
Gene Sequence |
Protein sequence |