Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55682.t1 | AES70414.1 | 59.8 | 346 | 73 | 3 | 1 | 346 | 1 | 280 | 4.40E-104 | 388.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55682.t1 | O04244 | 27.4 | 135 | 94 | 2 | 83 | 215 | 6 | 138 | 1.2e-09 | 66.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55682.t1 | G7J017 | 59.8 | 346 | 73 | 3 | 1 | 346 | 1 | 280 | 3.2e-104 | 388.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55682.t1 | MTR_3g053920 | 60.116 | 346 | 72 | 3 | 1 | 346 | 1 | 280 | 1.00e-132 | 387 |
| MS.gene55682.t1 | MTR_2g061500 | 87.597 | 129 | 16 | 0 | 1 | 129 | 1 | 129 | 4.94e-78 | 241 |
| MS.gene55682.t1 | MTR_4g103530 | 83.158 | 95 | 16 | 0 | 55 | 149 | 1 | 95 | 3.70e-53 | 178 |
| MS.gene55682.t1 | MTR_7g011710 | 68.235 | 85 | 27 | 0 | 55 | 139 | 1 | 85 | 3.03e-36 | 132 |
| MS.gene55682.t1 | MTR_6g033215 | 34.682 | 173 | 111 | 1 | 29 | 199 | 122 | 294 | 6.62e-33 | 127 |
| MS.gene55682.t1 | MTR_0010s0370 | 35.593 | 177 | 104 | 3 | 8 | 177 | 4 | 177 | 1.84e-29 | 114 |
| MS.gene55682.t1 | MTR_0010s0350 | 35.593 | 177 | 104 | 3 | 8 | 177 | 4 | 177 | 1.84e-29 | 114 |
| MS.gene55682.t1 | MTR_8g463110 | 58.475 | 118 | 47 | 1 | 289 | 404 | 1 | 118 | 4.57e-27 | 115 |
| MS.gene55682.t1 | MTR_8g463110 | 50.000 | 78 | 39 | 0 | 406 | 483 | 180 | 257 | 1.75e-18 | 89.4 |
| MS.gene55682.t1 | MTR_6g034215 | 66.667 | 54 | 18 | 0 | 418 | 471 | 196 | 249 | 5.34e-16 | 79.7 |
| MS.gene55682.t1 | MTR_4g020630 | 62.000 | 50 | 19 | 0 | 419 | 468 | 129 | 178 | 3.94e-14 | 75.1 |
| MS.gene55682.t1 | MTR_1g036720 | 33.010 | 103 | 69 | 0 | 11 | 113 | 9 | 111 | 1.12e-12 | 65.1 |
| MS.gene55682.t1 | MTR_1g100687 | 58.000 | 50 | 21 | 0 | 421 | 470 | 133 | 182 | 1.57e-12 | 67.8 |
| MS.gene55682.t1 | MTR_6g009010 | 54.000 | 50 | 23 | 0 | 420 | 469 | 201 | 250 | 6.21e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55682.t1 | AT3G31430 | 28.571 | 210 | 142 | 5 | 11 | 216 | 107 | 312 | 8.60e-16 | 79.3 |
| MS.gene55682.t1 | AT2G17920 | 25.463 | 216 | 147 | 6 | 8 | 215 | 9 | 218 | 8.64e-16 | 78.6 |
| MS.gene55682.t1 | AT2G13450 | 27.174 | 184 | 128 | 4 | 36 | 216 | 39 | 219 | 3.93e-15 | 77.8 |
| MS.gene55682.t1 | AT3G57587 | 27.660 | 141 | 98 | 2 | 77 | 215 | 80 | 218 | 2.10e-14 | 75.1 |
| MS.gene55682.t1 | AT2G41590 | 23.715 | 253 | 159 | 7 | 77 | 314 | 80 | 313 | 7.91e-14 | 73.6 |
| MS.gene55682.t1 | AT5G36228 | 27.174 | 184 | 126 | 4 | 36 | 215 | 39 | 218 | 8.31e-14 | 73.6 |
| MS.gene55682.t1 | AT3G47920 | 26.950 | 141 | 99 | 2 | 77 | 215 | 9 | 147 | 9.93e-12 | 66.2 |
Find 142 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGCTGTTGATGGGATTA+TGG | 0.220539 | 3.3:+57107300 | MS.gene55682:CDS |
| CATCAACCTTATGGTGAAAT+TGG | 0.236408 | 3.3:-57106379 | None:intergenic |
| AGACATACGCTCGCTGAAAT+AGG | 0.266771 | 3.3:-57106294 | None:intergenic |
| ATCCGCCACTGCTCGTAAAA+AGG | 0.293750 | 3.3:+57108523 | MS.gene55682:CDS |
| CAGGTCCATGGTTTACCATT+TGG | 0.298080 | 3.3:+57106521 | MS.gene55682:CDS |
| AGGACTTTGTTACTAATTCT+TGG | 0.298190 | 3.3:+57108216 | MS.gene55682:CDS |
| AAGCCTTCATCTCAAAGAAT+TGG | 0.310102 | 3.3:+57106851 | MS.gene55682:CDS |
| TGCTACTAACAGGTGGTTAC+AGG | 0.322033 | 3.3:+57106880 | MS.gene55682:CDS |
| ATTATGGGAAATGTTGTAAT+AGG | 0.327741 | 3.3:+57107316 | MS.gene55682:CDS |
| CCTATGGTAGGTCAAGGTAT+AGG | 0.337117 | 3.3:+57106554 | MS.gene55682:CDS |
| TCATATCGAGTTCTGGATTC+AGG | 0.340405 | 3.3:+57106502 | MS.gene55682:CDS |
| TCGTAGCGAAAATGACGTTT+AGG | 0.342945 | 3.3:-57108164 | None:intergenic |
| CTCAATGCTGCTGCTCCTGC+TGG | 0.344625 | 3.3:+57106938 | MS.gene55682:CDS |
| AGGTGAGACCGTCAAGATTC+AGG | 0.350710 | 3.3:-57106163 | None:intergenic |
| CGTTGAATCATATCGAGTTC+TGG | 0.362336 | 3.3:+57106495 | MS.gene55682:CDS |
| ACAACTTGTTCATCATCTAT+AGG | 0.371031 | 3.3:-57107388 | None:intergenic |
| GCAGTGTTAGCGCGGCCAGC+AGG | 0.377102 | 3.3:-57106953 | None:intergenic |
| CCTGACCGTCCATTGGTGCT+CGG | 0.378686 | 3.3:+57107169 | MS.gene55682:CDS |
| CTGATGATGGAGTCCGTAGC+TGG | 0.379112 | 3.3:+57106816 | MS.gene55682:CDS |
| GTTCCAATTCTTTGAGATGA+AGG | 0.382349 | 3.3:-57106854 | None:intergenic |
| TATCCCAAGATGATGCATAT+TGG | 0.383708 | 3.3:+57108438 | MS.gene55682:CDS |
| CTATGGTAGGTCAAGGTATA+GGG | 0.388234 | 3.3:+57106555 | MS.gene55682:CDS |
| TTTGCTGTTGATGGGATTAT+GGG | 0.395920 | 3.3:+57107301 | MS.gene55682:CDS |
| TAGCTCTTACATGAGACTTA+AGG | 0.402604 | 3.3:+57106625 | MS.gene55682:CDS |
| CACGGGCAGCATCAACCTTA+TGG | 0.405332 | 3.3:-57106388 | None:intergenic |
| CTTGTTCCAATTTCACCATA+AGG | 0.405419 | 3.3:+57106373 | MS.gene55682:CDS |
| GTGGTTCGTATTTGAAGAAA+AGG | 0.408019 | 3.3:+57107245 | MS.gene55682:CDS |
| GCATCGGATTCAGTTGAAAC+TGG | 0.408636 | 3.3:-57107205 | None:intergenic |
| TGATTCAACGGGACAAAACT+TGG | 0.415783 | 3.3:-57106482 | None:intergenic |
| CTGACCGTCCATTGGTGCTC+GGG | 0.419396 | 3.3:+57107170 | MS.gene55682:CDS |
| GAATTATCATTTGCTGTTGA+TGG | 0.421847 | 3.3:+57107292 | MS.gene55682:CDS |
| TGCTGCCCAAAATGCTGTCT+TGG | 0.423355 | 3.3:+57107060 | MS.gene55682:CDS |
| TTGGAACAGCTGCTACTAAC+AGG | 0.423746 | 3.3:+57106870 | MS.gene55682:CDS |
| GGTGCAACATTGACAAGAAT+AGG | 0.430171 | 3.3:-57108122 | None:intergenic |
| GTCGCCAATATGCATCATCT+TGG | 0.435832 | 3.3:-57108442 | None:intergenic |
| GTAGCGATCAGCAACAGATT+TGG | 0.441459 | 3.3:-57106351 | None:intergenic |
| ACACGCCACTCTTGTTTCAA+TGG | 0.441938 | 3.3:-57106668 | None:intergenic |
| TGGCGTGTTCGTGCTACTAA+TGG | 0.442394 | 3.3:+57106683 | MS.gene55682:CDS |
| GCATCTAGAACCGGGGTTCA+AGG | 0.444158 | 3.3:+57108196 | MS.gene55682:CDS |
| AAATGCGTGGCATCTAGAAC+CGG | 0.444265 | 3.3:+57108187 | MS.gene55682:CDS |
| TGCTTGGAAGCCAGGCAAAA+AGG | 0.446090 | 3.3:+57106319 | MS.gene55682:CDS |
| ACAAAACTTGGGACGACACC+AGG | 0.448728 | 3.3:-57106470 | None:intergenic |
| TGAGATGAAGGCTTTAAATA+CGG | 0.453298 | 3.3:-57106842 | None:intergenic |
| ATGTCTCGTGCTTGGAAGCC+AGG | 0.453399 | 3.3:+57106311 | MS.gene55682:CDS |
| GACCTATGAGACAGTGTTCA+AGG | 0.454398 | 3.3:-57106241 | None:intergenic |
| CTTTGTTACTAATTCTTGGC+AGG | 0.457702 | 3.3:+57108220 | MS.gene55682:CDS |
| GTCCTTGAACACTGTCTCAT+AGG | 0.463466 | 3.3:+57106239 | MS.gene55682:CDS |
| ATTTGGTTTCATTCAACCTA+TGG | 0.465146 | 3.3:+57106538 | MS.gene55682:CDS |
| GCTGCCCGTGTTCTTGATGA+AGG | 0.477877 | 3.3:+57106401 | MS.gene55682:CDS |
| TACGGCCATCATAAGCTTTG+AGG | 0.479642 | 3.3:-57106592 | None:intergenic |
| AGAACTCGATATGATTCAAC+GGG | 0.480591 | 3.3:-57106493 | None:intergenic |
| TGTCACAGGTGTGGACTGTT+GGG | 0.481524 | 3.3:+57106752 | MS.gene55682:CDS |
| TGCGACATAGAGACAGGAAT+AGG | 0.483601 | 3.3:-57106905 | None:intergenic |
| CTGGTTCAGACTCAAGGTTA+AGG | 0.485928 | 3.3:-57106205 | None:intergenic |
| CCGAGCACCAATGGACGGTC+AGG | 0.491286 | 3.3:-57107169 | None:intergenic |
| TGGTGCTACAGGCGAAGCTC+AGG | 0.491681 | 3.3:+57108376 | MS.gene55682:intron |
| TTCGAGCTTGAATCTGATGA+TGG | 0.494215 | 3.3:+57106803 | MS.gene55682:CDS |
| GCGACATAGAGACAGGAATA+GGG | 0.501118 | 3.3:-57106904 | None:intergenic |
| TGTTGTACCTGTGGAGGAAG+AGG | 0.502378 | 3.3:-57107131 | None:intergenic |
| TTGTCACAGGTGTGGACTGT+TGG | 0.503879 | 3.3:+57106751 | MS.gene55682:CDS |
| TTCCTCTTGTACCTCAGCAT+CGG | 0.504984 | 3.3:-57107221 | None:intergenic |
| CTGCTGCCCTCTTCCTCCAC+AGG | 0.506951 | 3.3:+57107124 | MS.gene55682:CDS |
| GGACGACACCAGGGGAAATA+CGG | 0.507266 | 3.3:-57106460 | None:intergenic |
| TCGCCAATATGCATCATCTT+GGG | 0.507860 | 3.3:-57108441 | None:intergenic |
| AATTATCATTTGCTGTTGAT+GGG | 0.508422 | 3.3:+57107293 | MS.gene55682:CDS |
| GTTATGGACCGTATTTCCCC+TGG | 0.508743 | 3.3:+57106452 | MS.gene55682:CDS |
| GACAACGTGCAAAGACTCAT+TGG | 0.509304 | 3.3:+57108462 | MS.gene55682:CDS |
| CCCACCAACCTGAATCTTGA+CGG | 0.509838 | 3.3:+57106155 | MS.gene55682:CDS |
| TCTGCTTCCTGACCGTCCAT+TGG | 0.514199 | 3.3:+57107162 | MS.gene55682:CDS |
| GAAGAAAAGGAAGCGTATGT+TGG | 0.516569 | 3.3:+57107258 | MS.gene55682:CDS |
| ATAGGTTGAATGAAACCAAA+TGG | 0.516817 | 3.3:-57106536 | None:intergenic |
| CTGTCTCATAGGTCGAGTCC+TGG | 0.520328 | 3.3:+57106250 | MS.gene55682:CDS |
| GTGCAACATTGACAAGAATA+GGG | 0.522667 | 3.3:-57108121 | None:intergenic |
| TAGGATCAAATGTTAGTCAT+GGG | 0.524354 | 3.3:+57107335 | MS.gene55682:CDS |
| AAGAGCTATGAATGGTGTTA+CGG | 0.524409 | 3.3:-57106610 | None:intergenic |
| ACGGCCATCATAAGCTTTGA+GGG | 0.524423 | 3.3:-57106591 | None:intergenic |
| TCAGTTGAAACTGGAACAGC+AGG | 0.525139 | 3.3:-57107196 | None:intergenic |
| ACCGTCAAGATTCAGGTTGG+TGG | 0.526969 | 3.3:-57106156 | None:intergenic |
| GCAGCAGCATTGAGAGGAGA+TGG | 0.536233 | 3.3:-57106929 | None:intergenic |
| TGATGATGGAGTCCGTAGCT+GGG | 0.536838 | 3.3:+57106817 | MS.gene55682:CDS |
| GCGAGCGTATGTCTCGTGCT+TGG | 0.539091 | 3.3:+57106303 | MS.gene55682:CDS |
| GGCCGCGCTAACACTGCTGA+AGG | 0.539194 | 3.3:+57106959 | MS.gene55682:CDS |
| GCAGGTAACCCGAGCACCAA+TGG | 0.543461 | 3.3:-57107178 | None:intergenic |
| TTAAATACGGTCCCCAGCTA+CGG | 0.546391 | 3.3:-57106829 | None:intergenic |
| TGCCTTCAGCAGTGTTAGCG+CGG | 0.547431 | 3.3:-57106961 | None:intergenic |
| AGGTTCGAATGCTTGAGCTC+AGG | 0.548439 | 3.3:+57108396 | MS.gene55682:CDS |
| GATGGCTGCGACATAGAGAC+AGG | 0.549076 | 3.3:-57106911 | None:intergenic |
| GTGTTCTTGATGAAGGGCCA+TGG | 0.550277 | 3.3:+57106408 | MS.gene55682:CDS |
| ATAGGATCAAATGTTAGTCA+TGG | 0.550331 | 3.3:+57107334 | MS.gene55682:CDS |
| GGTACCCTCAAAGCTTATGA+TGG | 0.559787 | 3.3:+57106587 | MS.gene55682:CDS |
| GGTTTCATTCAACCTATGGT+AGG | 0.560963 | 3.3:+57106542 | MS.gene55682:CDS |
| ATAGGGTAATGATCGGAAGC+AGG | 0.563188 | 3.3:-57108104 | None:intergenic |
| CCGTCAAGATTCAGGTTGGT+GGG | 0.564705 | 3.3:-57106155 | None:intergenic |
| ATTGAATCTCGCGATCAGCC+AGG | 0.565008 | 3.3:-57106268 | None:intergenic |
| GAGTTCTGGATTCAGGTCCA+TGG | 0.571214 | 3.3:+57106509 | MS.gene55682:CDS |
| GTAACAAAGTCCTTGAACCC+CGG | 0.574550 | 3.3:-57108206 | None:intergenic |
| GATGATATGTATGTAACTGC+TGG | 0.576587 | 3.3:+57107364 | MS.gene55682:CDS |
| ATTCAACCTATGGTAGGTCA+AGG | 0.576603 | 3.3:+57106548 | MS.gene55682:CDS |
| CCTATACCTTGACCTACCAT+AGG | 0.584985 | 3.3:-57106554 | None:intergenic |
| AATGCGTGGCATCTAGAACC+GGG | 0.585894 | 3.3:+57108188 | MS.gene55682:CDS |
| GACAAGAATAGGGTAATGAT+CGG | 0.586157 | 3.3:-57108111 | None:intergenic |
| GGAATCTGTAGCCGAGGTGT+AGG | 0.588697 | 3.3:-57108143 | None:intergenic |
| GCAGGAGCAGCAGCATTGAG+AGG | 0.588766 | 3.3:-57106935 | None:intergenic |
| GATTCAACGGGACAAAACTT+GGG | 0.588972 | 3.3:-57106481 | None:intergenic |
| GGTCTCACCTTGTCTGAGGA+AGG | 0.589254 | 3.3:+57106176 | MS.gene55682:CDS |
| GCTAACACTGCTGAAGGCAA+TGG | 0.591118 | 3.3:+57106965 | MS.gene55682:CDS |
| ATGCGTGGCATCTAGAACCG+GGG | 0.598375 | 3.3:+57108189 | MS.gene55682:CDS |
| TGCAAAGACTCATTGGTACA+AGG | 0.603884 | 3.3:+57108469 | MS.gene55682:CDS |
| GTTGTACCTGTGGAGGAAGA+GGG | 0.604958 | 3.3:-57107130 | None:intergenic |
| TGACGGTCTCACCTTGTCTG+AGG | 0.605230 | 3.3:+57106172 | MS.gene55682:CDS |
| GAGACTGAAAAGCCATCATA+CGG | 0.609373 | 3.3:-57107009 | None:intergenic |
| ACTAGAGGCTGTTGTACCTG+TGG | 0.610824 | 3.3:-57107140 | None:intergenic |
| TCTCATGTAAGAGCTATGAA+TGG | 0.614120 | 3.3:-57106618 | None:intergenic |
| TGAAACCAAATGGTAAACCA+TGG | 0.615949 | 3.3:-57106526 | None:intergenic |
| ATGGCCCTTCATCAAGAACA+CGG | 0.617686 | 3.3:-57106406 | None:intergenic |
| CAGAACTCGATATGATTCAA+CGG | 0.618989 | 3.3:-57106494 | None:intergenic |
| ATCAAATGTTAGTCATGGGG+GGG | 0.619233 | 3.3:+57107339 | MS.gene55682:CDS |
| TGAAAATTATCATAAAGCCA+TGG | 0.620312 | 3.3:-57106425 | None:intergenic |
| GATGATGGAGTCCGTAGCTG+GGG | 0.622379 | 3.3:+57106818 | MS.gene55682:CDS |
| CGTTTAGGAATCTGTAGCCG+AGG | 0.623630 | 3.3:-57108149 | None:intergenic |
| AAGACTCATTGGTACAAGGA+TGG | 0.626459 | 3.3:+57108473 | MS.gene55682:CDS |
| ATCCGATGCTGAGGTACAAG+AGG | 0.628581 | 3.3:+57107219 | MS.gene55682:CDS |
| TTCAACTGAATCCGATGCTG+AGG | 0.631587 | 3.3:+57107210 | MS.gene55682:CDS |
| GACGAGACCTTCCTCAGACA+AGG | 0.633356 | 3.3:-57106183 | None:intergenic |
| AGAGGCTGTTGTACCTGTGG+AGG | 0.640895 | 3.3:-57107137 | None:intergenic |
| AGGATCAAATGTTAGTCATG+GGG | 0.645313 | 3.3:+57107336 | MS.gene55682:CDS |
| GCTGAGGTACAAGAGGAAAG+TGG | 0.646726 | 3.3:+57107226 | MS.gene55682:CDS |
| CTGTTCCATTGAAACAAGAG+TGG | 0.649479 | 3.3:+57106663 | MS.gene55682:CDS |
| CTGCCCGTGTTCTTGATGAA+GGG | 0.649758 | 3.3:+57106402 | MS.gene55682:CDS |
| GAGACCGTCAAGATTCAGGT+TGG | 0.650330 | 3.3:-57106159 | None:intergenic |
| TGGCCCTTCATCAAGAACAC+GGG | 0.651409 | 3.3:-57106405 | None:intergenic |
| CAAAACTTGGGACGACACCA+GGG | 0.654153 | 3.3:-57106469 | None:intergenic |
| GGATCAAATGTTAGTCATGG+GGG | 0.656706 | 3.3:+57107337 | MS.gene55682:CDS |
| ACGGTCAGGAAGCAGACTAG+AGG | 0.659710 | 3.3:-57107155 | None:intergenic |
| TGCTACTGTTGAGACTCTTG+TGG | 0.660371 | 3.3:+57108079 | MS.gene55682:intron |
| CAAATGATAATTCATTCTGA+CGG | 0.662002 | 3.3:-57107282 | None:intergenic |
| GATCAAATGTTAGTCATGGG+GGG | 0.667402 | 3.3:+57107338 | MS.gene55682:CDS |
| GTAACCCGAGCACCAATGGA+CGG | 0.668307 | 3.3:-57107174 | None:intergenic |
| TCAATGTTGCACCTACACCT+CGG | 0.673718 | 3.3:+57108132 | MS.gene55682:CDS |
| AAAACTTGGGACGACACCAG+GGG | 0.689747 | 3.3:-57106468 | None:intergenic |
| GAACAGCTGCTACTAACAGG+TGG | 0.694349 | 3.3:+57106873 | MS.gene55682:CDS |
| ACTGTTGGGACATACTGACA+AGG | 0.820852 | 3.3:+57106766 | MS.gene55682:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATAATTTTCATATTGTTA+TGG | + | chr3.3:57106436-57106455 | MS.gene55682:CDS | 15.0% |
| !! | TAACAATTTCAACAGTAATA+TGG | - | chr3.3:57107707-57107726 | None:intergenic | 20.0% |
| !!! | CAATGTCTTTTTTTAATTTG+TGG | - | chr3.3:57108322-57108341 | None:intergenic | 20.0% |
| ! | ACCTTTAAGTATGAAAAACT+TGG | + | chr3.3:57106722-57106741 | MS.gene55682:CDS | 25.0% |
| ! | AGATATCATTAAAATCTCCT+AGG | - | chr3.3:57107851-57107870 | None:intergenic | 25.0% |
| ! | ATTATGGGAAATGTTGTAAT+AGG | + | chr3.3:57107316-57107335 | MS.gene55682:CDS | 25.0% |
| ! | CAAATGATAATTCATTCTGA+CGG | - | chr3.3:57107285-57107304 | None:intergenic | 25.0% |
| ! | CATGAAAAAACTTTGTGTTA+TGG | - | chr3.3:57108502-57108521 | None:intergenic | 25.0% |
| ! | GAAATTGTTAACAATACTCT+TGG | + | chr3.3:57107717-57107736 | MS.gene55682:intron | 25.0% |
| ! | TGAAAATTATCATAAAGCCA+TGG | - | chr3.3:57106428-57106447 | None:intergenic | 25.0% |
| !! | ACCAAGTTTTTCATACTTAA+AGG | - | chr3.3:57106726-57106745 | None:intergenic | 25.0% |
| !! | TTAACAATACTCTTGGTAAT+TGG | + | chr3.3:57107724-57107743 | MS.gene55682:intron | 25.0% |
| !!! | AATTATCATTTGCTGTTGAT+GGG | + | chr3.3:57107293-57107312 | MS.gene55682:CDS | 25.0% |
| !!! | GGAGTTCTTCAATTTTATTT+CGG | - | chr3.3:57107569-57107588 | None:intergenic | 25.0% |
| AATCGTAACCAAGCAAAAAA+CGG | - | chr3.3:57107590-57107609 | None:intergenic | 30.0% | |
| AGATGATGAACAAGTTGTAA+TGG | + | chr3.3:57107393-57107412 | MS.gene55682:intron | 30.0% | |
| AGGACTTTGTTACTAATTCT+TGG | + | chr3.3:57108216-57108235 | MS.gene55682:CDS | 30.0% | |
| ATAGGATCAAATGTTAGTCA+TGG | + | chr3.3:57107334-57107353 | MS.gene55682:CDS | 30.0% | |
| TACACTTGGTTTAAAAGTCT+TGG | + | chr3.3:57107984-57108003 | MS.gene55682:intron | 30.0% | |
| TAGGATCAAATGTTAGTCAT+GGG | + | chr3.3:57107335-57107354 | MS.gene55682:CDS | 30.0% | |
| TCACTTAGGAATAAAAGATC+CGG | - | chr3.3:57107534-57107553 | None:intergenic | 30.0% | |
| TCCAAAATTATCTTCATGTG+CGG | + | chr3.3:57108265-57108284 | MS.gene55682:intron | 30.0% | |
| ! | AAATTTTCATGACCGTATGA+TGG | + | chr3.3:57106997-57107016 | MS.gene55682:CDS | 30.0% |
| ! | ACAACTTGTTCATCATCTAT+AGG | - | chr3.3:57107391-57107410 | None:intergenic | 30.0% |
| ! | AGACTTTTAAACCAAGTGTA+CGG | - | chr3.3:57107984-57108003 | None:intergenic | 30.0% |
| ! | ATAGGTTGAATGAAACCAAA+TGG | - | chr3.3:57106539-57106558 | None:intergenic | 30.0% |
| ! | ATTTGGTTTCATTCAACCTA+TGG | + | chr3.3:57106538-57106557 | MS.gene55682:CDS | 30.0% |
| !! | GAATTATCATTTGCTGTTGA+TGG | + | chr3.3:57107292-57107311 | MS.gene55682:CDS | 30.0% |
| !! | TGAGATGAAGGCTTTAAATA+CGG | - | chr3.3:57106845-57106864 | None:intergenic | 30.0% |
| !!! | AACTTGGTATTTTTTGTCAC+AGG | + | chr3.3:57106738-57106757 | MS.gene55682:CDS | 30.0% |
| AAAATTATCTTCATGTGCGG+AGG | + | chr3.3:57108268-57108287 | MS.gene55682:intron | 35.0% | |
| AAGCCTTCATCTCAAAGAAT+TGG | + | chr3.3:57106851-57106870 | MS.gene55682:CDS | 35.0% | |
| AATGCTGTCTTGGCTAAAAA+AGG | + | chr3.3:57107070-57107089 | MS.gene55682:CDS | 35.0% | |
| AGAACTCGATATGATTCAAC+GGG | - | chr3.3:57106496-57106515 | None:intergenic | 35.0% | |
| AGGATCAAATGTTAGTCATG+GGG | + | chr3.3:57107336-57107355 | MS.gene55682:CDS | 35.0% | |
| ATTAGGATAGCCATAATAGC+CGG | - | chr3.3:57107757-57107776 | None:intergenic | 35.0% | |
| CAGAACTCGATATGATTCAA+CGG | - | chr3.3:57106497-57106516 | None:intergenic | 35.0% | |
| CATCAACCTTATGGTGAAAT+TGG | - | chr3.3:57106382-57106401 | None:intergenic | 35.0% | |
| CTTAGATGCAAGTGAGAAAA+GGG | + | chr3.3:57107869-57107888 | MS.gene55682:intron | 35.0% | |
| CTTGTTCCAATTTCACCATA+AGG | + | chr3.3:57106373-57106392 | MS.gene55682:CDS | 35.0% | |
| CTTTGTTACTAATTCTTGGC+AGG | + | chr3.3:57108220-57108239 | MS.gene55682:CDS | 35.0% | |
| GACAAGAATAGGGTAATGAT+CGG | - | chr3.3:57108114-57108133 | None:intergenic | 35.0% | |
| GATGATATGTATGTAACTGC+TGG | + | chr3.3:57107364-57107383 | MS.gene55682:CDS | 35.0% | |
| GCAAACAATTACAAGAGACA+CGG | + | chr3.3:57108351-57108370 | MS.gene55682:intron | 35.0% | |
| GTCTTGGCTAAAAAAGGTAA+TGG | + | chr3.3:57107076-57107095 | MS.gene55682:CDS | 35.0% | |
| GTGCAACATTGACAAGAATA+GGG | - | chr3.3:57108124-57108143 | None:intergenic | 35.0% | |
| GTGCTCTTGCAAATGATTTA+TGG | + | chr3.3:57108039-57108058 | MS.gene55682:intron | 35.0% | |
| GTGGTTCGTATTTGAAGAAA+AGG | + | chr3.3:57107245-57107264 | MS.gene55682:CDS | 35.0% | |
| TAGCTCTTACATGAGACTTA+AGG | + | chr3.3:57106625-57106644 | MS.gene55682:CDS | 35.0% | |
| TATCCCAAGATGATGCATAT+TGG | + | chr3.3:57108438-57108457 | MS.gene55682:CDS | 35.0% | |
| TATTATGGCTATCCTAATGG+AGG | + | chr3.3:57107759-57107778 | MS.gene55682:intron | 35.0% | |
| TCTCATGTAAGAGCTATGAA+TGG | - | chr3.3:57106621-57106640 | None:intergenic | 35.0% | |
| TCTTAGATGCAAGTGAGAAA+AGG | + | chr3.3:57107868-57107887 | MS.gene55682:intron | 35.0% | |
| TGAAACCAAATGGTAAACCA+TGG | - | chr3.3:57106529-57106548 | None:intergenic | 35.0% | |
| TTAGATGCAAGTGAGAAAAG+GGG | + | chr3.3:57107870-57107889 | MS.gene55682:intron | 35.0% | |
| TTGTCGAAGAAAATTCCAAG+CGG | - | chr3.3:57107796-57107815 | None:intergenic | 35.0% | |
| ! | AAGAGCTATGAATGGTGTTA+CGG | - | chr3.3:57106613-57106632 | None:intergenic | 35.0% |
| ! | CAACTGTCTTCTCAATTTTC+AGG | + | chr3.3:57107813-57107832 | MS.gene55682:intron | 35.0% |
| ! | TCCGCACATGAAGATAATTT+TGG | - | chr3.3:57108269-57108288 | None:intergenic | 35.0% |
| ! | TTTAGCCAAGACAGCATTTT+GGG | - | chr3.3:57107068-57107087 | None:intergenic | 35.0% |
| ! | TTTTAGCCAAGACAGCATTT+TGG | - | chr3.3:57107069-57107088 | None:intergenic | 35.0% |
| !! | ATTTGCTGTTGATGGGATTA+TGG | + | chr3.3:57107300-57107319 | MS.gene55682:CDS | 35.0% |
| !! | GTTCCAATTCTTTGAGATGA+AGG | - | chr3.3:57106857-57106876 | None:intergenic | 35.0% |
| !! | TTTGCTGTTGATGGGATTAT+GGG | + | chr3.3:57107301-57107320 | MS.gene55682:CDS | 35.0% |
| AAAGATCCGGATTAAAGTGC+CGG | - | chr3.3:57107521-57107540 | None:intergenic | 40.0% | |
| AAGACTCATTGGTACAAGGA+TGG | + | chr3.3:57108473-57108492 | MS.gene55682:CDS | 40.0% | |
| AAGCCATTGATAAGCCATTG+GGG | - | chr3.3:57107909-57107928 | None:intergenic | 40.0% | |
| ATCAAATGTTAGTCATGGGG+GGG | + | chr3.3:57107339-57107358 | MS.gene55682:CDS | 40.0% | |
| ATTCAACCTATGGTAGGTCA+AGG | + | chr3.3:57106548-57106567 | MS.gene55682:CDS | 40.0% | |
| CCAAAATAAAGCTAAACCCC+CGG | - | chr3.3:57107643-57107662 | None:intergenic | 40.0% | |
| CGTTGAATCATATCGAGTTC+TGG | + | chr3.3:57106495-57106514 | MS.gene55682:CDS | 40.0% | |
| CTATGGTAGGTCAAGGTATA+GGG | + | chr3.3:57106555-57106574 | MS.gene55682:CDS | 40.0% | |
| CTGTTCCATTGAAACAAGAG+TGG | + | chr3.3:57106663-57106682 | MS.gene55682:CDS | 40.0% | |
| GAAGCCATTGATAAGCCATT+GGG | - | chr3.3:57107910-57107929 | None:intergenic | 40.0% | |
| GAGACTGAAAAGCCATCATA+CGG | - | chr3.3:57107012-57107031 | None:intergenic | 40.0% | |
| GATCAAATGTTAGTCATGGG+GGG | + | chr3.3:57107338-57107357 | MS.gene55682:CDS | 40.0% | |
| GATGAACAAGTTGTAATGGC+AGG | + | chr3.3:57107397-57107416 | MS.gene55682:intron | 40.0% | |
| GATTCAACGGGACAAAACTT+GGG | - | chr3.3:57106484-57106503 | None:intergenic | 40.0% | |
| GGATCAAATGTTAGTCATGG+GGG | + | chr3.3:57107337-57107356 | MS.gene55682:CDS | 40.0% | |
| GGCTATTATGGCTATCCTAA+TGG | + | chr3.3:57107756-57107775 | MS.gene55682:intron | 40.0% | |
| GGTGCAACATTGACAAGAAT+AGG | - | chr3.3:57108125-57108144 | None:intergenic | 40.0% | |
| GGTTTCATTCAACCTATGGT+AGG | + | chr3.3:57106542-57106561 | MS.gene55682:CDS | 40.0% | |
| TCGCCAATATGCATCATCTT+GGG | - | chr3.3:57108444-57108463 | None:intergenic | 40.0% | |
| TCGTAGCGAAAATGACGTTT+AGG | - | chr3.3:57108167-57108186 | None:intergenic | 40.0% | |
| TGATTCAACGGGACAAAACT+TGG | - | chr3.3:57106485-57106504 | None:intergenic | 40.0% | |
| TGCAAAGACTCATTGGTACA+AGG | + | chr3.3:57108469-57108488 | MS.gene55682:CDS | 40.0% | |
| TTCGAGCTTGAATCTGATGA+TGG | + | chr3.3:57106803-57106822 | MS.gene55682:CDS | 40.0% | |
| ! | ATTTTCGCTACGAAAATGCG+TGG | + | chr3.3:57108174-57108193 | MS.gene55682:CDS | 40.0% |
| ! | CAAGGTATAGGGAGTTTTCT+AGG | + | chr3.3:57106566-57106585 | MS.gene55682:CDS | 40.0% |
| ! | GAAGAAAAGGAAGCGTATGT+TGG | + | chr3.3:57107258-57107277 | MS.gene55682:CDS | 40.0% |
| ! | GACGAAATTTAAGACCCCAA+TGG | + | chr3.3:57107892-57107911 | MS.gene55682:intron | 40.0% |
| !! | TCATATCGAGTTCTGGATTC+AGG | + | chr3.3:57106502-57106521 | MS.gene55682:CDS | 40.0% |
| !!! | CATTTTCTGGTTCAGACTCA+AGG | - | chr3.3:57106214-57106233 | None:intergenic | 40.0% |
| !!! | CTTCTCAATTTTCAGGTCCA+TGG | + | chr3.3:57107820-57107839 | MS.gene55682:intron | 40.0% |
| !!! | GAAGAACTCCGTTTTTTGCT+TGG | + | chr3.3:57107579-57107598 | MS.gene55682:intron | 40.0% |
| !!! | GGTATTTTTTGTCACAGGTG+TGG | + | chr3.3:57106743-57106762 | MS.gene55682:CDS | 40.0% |
| AAATCTCCTAGGATGCACCA+TGG | - | chr3.3:57107840-57107859 | None:intergenic | 45.0% | |
| ACTGTTGGGACATACTGACA+AGG | + | chr3.3:57106766-57106785 | MS.gene55682:CDS | 45.0% | |
| AGACATACGCTCGCTGAAAT+AGG | - | chr3.3:57106297-57106316 | None:intergenic | 45.0% | |
| AGACCCCAATGGCTTATCAA+TGG | + | chr3.3:57107903-57107922 | MS.gene55682:intron | 45.0% | |
| AGAGTCTCAACAGTAGCATG+CGG | - | chr3.3:57108077-57108096 | None:intergenic | 45.0% | |
| AGTGTACGGATAACCTTCGA+CGG | - | chr3.3:57107970-57107989 | None:intergenic | 45.0% | |
| ATAGGGTAATGATCGGAAGC+AGG | - | chr3.3:57108107-57108126 | None:intergenic | 45.0% | |
| ATGGCCCTTCATCAAGAACA+CGG | - | chr3.3:57106409-57106428 | None:intergenic | 45.0% | |
| CAATTACAAGAGACACGGCT+TGG | + | chr3.3:57108356-57108375 | MS.gene55682:intron | 45.0% | |
| CAGGTCCATGGTTTACCATT+TGG | + | chr3.3:57106521-57106540 | MS.gene55682:CDS | 45.0% | |
| CCGACCTTAAATACCTAGTC+CGG | + | chr3.3:57107499-57107518 | MS.gene55682:intron | 45.0% | |
| CCTATACCTTGACCTACCAT+AGG | - | chr3.3:57106557-57106576 | None:intergenic | 45.0% | |
| CCTATGGTAGGTCAAGGTAT+AGG | + | chr3.3:57106554-57106573 | MS.gene55682:CDS | 45.0% | |
| CTGAATCAAGAACCGCTTGA+CGG | - | chr3.3:57107932-57107951 | None:intergenic | 45.0% | |
| CTGGTTCAGACTCAAGGTTA+AGG | - | chr3.3:57106208-57106227 | None:intergenic | 45.0% | |
| GACAACGTGCAAAGACTCAT+TGG | + | chr3.3:57108462-57108481 | MS.gene55682:CDS | 45.0% | |
| GACCTATGAGACAGTGTTCA+AGG | - | chr3.3:57106244-57106263 | None:intergenic | 45.0% | |
| GCATCGGATTCAGTTGAAAC+TGG | - | chr3.3:57107208-57107227 | None:intergenic | 45.0% | |
| GCGACATAGAGACAGGAATA+GGG | - | chr3.3:57106907-57106926 | None:intergenic | 45.0% | |
| GCTACTAGACTCATTCACCT+AGG | - | chr3.3:57107441-57107460 | None:intergenic | 45.0% | |
| GGAAGCCATTGATAAGCCAT+TGG | - | chr3.3:57107911-57107930 | None:intergenic | 45.0% | |
| GGTACCCTCAAAGCTTATGA+TGG | + | chr3.3:57106587-57106606 | MS.gene55682:CDS | 45.0% | |
| GGTGAATGAGTCTAGTAGCT+TGG | + | chr3.3:57107442-57107461 | MS.gene55682:intron | 45.0% | |
| GTAACAAAGTCCTTGAACCC+CGG | - | chr3.3:57108209-57108228 | None:intergenic | 45.0% | |
| GTAGCGATCAGCAACAGATT+TGG | - | chr3.3:57106354-57106373 | None:intergenic | 45.0% | |
| GTCCTTGAACACTGTCTCAT+AGG | + | chr3.3:57106239-57106258 | MS.gene55682:CDS | 45.0% | |
| GTCGCCAATATGCATCATCT+TGG | - | chr3.3:57108445-57108464 | None:intergenic | 45.0% | |
| GTCTAGTAGCTTGGAATTGC+CGG | + | chr3.3:57107451-57107470 | MS.gene55682:intron | 45.0% | |
| TACGGCCATCATAAGCTTTG+AGG | - | chr3.3:57106595-57106614 | None:intergenic | 45.0% | |
| TATCAATGGCTTCCGTCAAG+CGG | + | chr3.3:57107917-57107936 | MS.gene55682:intron | 45.0% | |
| TCAATGTTGCACCTACACCT+CGG | + | chr3.3:57108132-57108151 | MS.gene55682:CDS | 45.0% | |
| TCAGTTGAAACTGGAACAGC+AGG | - | chr3.3:57107199-57107218 | None:intergenic | 45.0% | |
| TCGAAGGTTATCCGTACACT+TGG | + | chr3.3:57107970-57107989 | MS.gene55682:intron | 45.0% | |
| TCTAGTAGCTTGGAATTGCC+GGG | + | chr3.3:57107452-57107471 | MS.gene55682:intron | 45.0% | |
| TGCGACATAGAGACAGGAAT+AGG | - | chr3.3:57106908-57106927 | None:intergenic | 45.0% | |
| TGCTACTAACAGGTGGTTAC+AGG | + | chr3.3:57106880-57106899 | MS.gene55682:CDS | 45.0% | |
| TGCTACTGTTGAGACTCTTG+TGG | + | chr3.3:57108079-57108098 | MS.gene55682:intron | 45.0% | |
| TTAAATACGGTCCCCAGCTA+CGG | - | chr3.3:57106832-57106851 | None:intergenic | 45.0% | |
| TTAAGGTCGGGAATTGCACT+CGG | - | chr3.3:57107489-57107508 | None:intergenic | 45.0% | |
| TTCAACTGAATCCGATGCTG+AGG | + | chr3.3:57107210-57107229 | MS.gene55682:CDS | 45.0% | |
| TTCCTCTTGTACCTCAGCAT+CGG | - | chr3.3:57107224-57107243 | None:intergenic | 45.0% | |
| TTGGAACAGCTGCTACTAAC+AGG | + | chr3.3:57106870-57106889 | MS.gene55682:CDS | 45.0% | |
| ! | AAATGCGTGGCATCTAGAAC+CGG | + | chr3.3:57108187-57108206 | MS.gene55682:CDS | 45.0% |
| ! | ACACGCCACTCTTGTTTCAA+TGG | - | chr3.3:57106671-57106690 | None:intergenic | 45.0% |
| ! | ACGGCCATCATAAGCTTTGA+GGG | - | chr3.3:57106594-57106613 | None:intergenic | 45.0% |
| ! | AGTGCCGGACTAGGTATTTA+AGG | - | chr3.3:57107506-57107525 | None:intergenic | 45.0% |
| ! | CCGGACTAGGTATTTAAGGT+CGG | - | chr3.3:57107502-57107521 | None:intergenic | 45.0% |
| ! | CGGACTAGGTATTTAAGGTC+GGG | - | chr3.3:57107501-57107520 | None:intergenic | 45.0% |
| ! | CTTGGTAATTGGCGTGTTAC+CGG | + | chr3.3:57107735-57107754 | MS.gene55682:intron | 45.0% |
| ! | TACCTTTTTACGAGCAGTGG+CGG | - | chr3.3:57108528-57108547 | None:intergenic | 45.0% |
| ! | TCAAGGACAGCAGCATTTTC+TGG | - | chr3.3:57106227-57106246 | None:intergenic | 45.0% |
| ! | TGTTTTCATGTAGACCGCAC+CGG | + | chr3.3:57107612-57107631 | MS.gene55682:intron | 45.0% |
| !!! | CCGGGGGTTTAGCTTTATTT+TGG | + | chr3.3:57107640-57107659 | MS.gene55682:intron | 45.0% |
| AAAACTTGGGACGACACCAG+GGG | - | chr3.3:57106471-57106490 | None:intergenic | 50.0% | |
| AAGTCTTGGTACTCCACGTG+CGG | + | chr3.3:57107998-57108017 | MS.gene55682:intron | 50.0% | |
| AATGGCAGGTCCTGATGATC+AGG | + | chr3.3:57107411-57107430 | MS.gene55682:intron | 50.0% | |
| ACAAAACTTGGGACGACACC+AGG | - | chr3.3:57106473-57106492 | None:intergenic | 50.0% | |
| ACTAGAGGCTGTTGTACCTG+TGG | - | chr3.3:57107143-57107162 | None:intergenic | 50.0% | |
| AGGTGAGACCGTCAAGATTC+AGG | - | chr3.3:57106166-57106185 | None:intergenic | 50.0% | |
| AGGTTCGAATGCTTGAGCTC+AGG | + | chr3.3:57108396-57108415 | MS.gene55682:CDS | 50.0% | |
| ATAACCTTCGACGGGAACGT+CGG | - | chr3.3:57107961-57107980 | None:intergenic | 50.0% | |
| ATCCGATGCTGAGGTACAAG+AGG | + | chr3.3:57107219-57107238 | MS.gene55682:CDS | 50.0% | |
| ATCCGCCACTGCTCGTAAAA+AGG | + | chr3.3:57108523-57108542 | MS.gene55682:CDS | 50.0% | |
| ATTGAATCTCGCGATCAGCC+AGG | - | chr3.3:57106271-57106290 | None:intergenic | 50.0% | |
| CAAAACTTGGGACGACACCA+GGG | - | chr3.3:57106472-57106491 | None:intergenic | 50.0% | |
| CCCACCAACCTGAATCTTGA+CGG | + | chr3.3:57106155-57106174 | MS.gene55682:CDS | 50.0% | |
| CCTAGTCCGGCACTTTAATC+CGG | + | chr3.3:57107512-57107531 | MS.gene55682:intron | 50.0% | |
| CGTCAAGCGGTTCTTGATTC+AGG | + | chr3.3:57107930-57107949 | MS.gene55682:intron | 50.0% | |
| CGTTTAGGAATCTGTAGCCG+AGG | - | chr3.3:57108152-57108171 | None:intergenic | 50.0% | |
| CTAGACTCATTCACCTAGGC+AGG | - | chr3.3:57107437-57107456 | None:intergenic | 50.0% | |
| CTAGTAGCTTGGAATTGCCG+GGG | + | chr3.3:57107453-57107472 | MS.gene55682:intron | 50.0% | |
| CTGCCCGTGTTCTTGATGAA+GGG | + | chr3.3:57106402-57106421 | MS.gene55682:CDS | 50.0% | |
| GAACAGCTGCTACTAACAGG+TGG | + | chr3.3:57106873-57106892 | MS.gene55682:CDS | 50.0% | |
| GAGACCGTCAAGATTCAGGT+TGG | - | chr3.3:57106162-57106181 | None:intergenic | 50.0% | |
| GAGTCTCAACAGTAGCATGC+GGG | - | chr3.3:57108076-57108095 | None:intergenic | 50.0% | |
| GCTAACACTGCTGAAGGCAA+TGG | + | chr3.3:57106965-57106984 | MS.gene55682:CDS | 50.0% | |
| GCTGAGGTACAAGAGGAAAG+TGG | + | chr3.3:57107226-57107245 | MS.gene55682:CDS | 50.0% | |
| GCTGATCTACGACCTCCATT+AGG | - | chr3.3:57107774-57107793 | None:intergenic | 50.0% | |
| GGTGAGCTAGTGTCTCACTT+AGG | - | chr3.3:57107548-57107567 | None:intergenic | 50.0% | |
| GTGTACGGATAACCTTCGAC+GGG | - | chr3.3:57107969-57107988 | None:intergenic | 50.0% | |
| GTGTTCTTGATGAAGGGCCA+TGG | + | chr3.3:57106408-57106427 | MS.gene55682:CDS | 50.0% | |
| GTTATGGACCGTATTTCCCC+TGG | + | chr3.3:57106452-57106471 | MS.gene55682:CDS | 50.0% | |
| GTTGTACCTGTGGAGGAAGA+GGG | - | chr3.3:57107133-57107152 | None:intergenic | 50.0% | |
| TGCTGCCCAAAATGCTGTCT+TGG | + | chr3.3:57107060-57107079 | MS.gene55682:CDS | 50.0% | |
| TGCTTGGAAGCCAGGCAAAA+AGG | + | chr3.3:57106319-57106338 | MS.gene55682:CDS | 50.0% | |
| TGGCCCTTCATCAAGAACAC+GGG | - | chr3.3:57106408-57106427 | None:intergenic | 50.0% | |
| TGTTGTACCTGTGGAGGAAG+AGG | - | chr3.3:57107134-57107153 | None:intergenic | 50.0% | |
| ! | AATGCGTGGCATCTAGAACC+GGG | + | chr3.3:57108188-57108207 | MS.gene55682:CDS | 50.0% |
| ! | GTGATCGTGACCTTTTTGCC+TGG | - | chr3.3:57106332-57106351 | None:intergenic | 50.0% |
| ! | TGGCGTGTTACCGGCTATTA+TGG | + | chr3.3:57107744-57107763 | MS.gene55682:intron | 50.0% |
| ! | TGGCGTGTTCGTGCTACTAA+TGG | + | chr3.3:57106683-57106702 | MS.gene55682:CDS | 50.0% |
| ! | TGTCACAGGTGTGGACTGTT+GGG | + | chr3.3:57106752-57106771 | MS.gene55682:CDS | 50.0% |
| ! | TTGTCACAGGTGTGGACTGT+TGG | + | chr3.3:57106751-57106770 | MS.gene55682:CDS | 50.0% |
| !! | ACCGTCAAGATTCAGGTTGG+TGG | - | chr3.3:57106159-57106178 | None:intergenic | 50.0% |
| !! | CCGTCAAGATTCAGGTTGGT+GGG | - | chr3.3:57106158-57106177 | None:intergenic | 50.0% |
| !! | GAGTTCTGGATTCAGGTCCA+TGG | + | chr3.3:57106509-57106528 | MS.gene55682:CDS | 50.0% |
| !! | TGATGATGGAGTCCGTAGCT+GGG | + | chr3.3:57106817-57106836 | MS.gene55682:CDS | 50.0% |
| AACCTTTCTTCCACCGCACG+TGG | - | chr3.3:57108014-57108033 | None:intergenic | 55.0% | |
| ACGGTCAGGAAGCAGACTAG+AGG | - | chr3.3:57107158-57107177 | None:intergenic | 55.0% | |
| AGAGGCTGTTGTACCTGTGG+AGG | - | chr3.3:57107140-57107159 | None:intergenic | 55.0% | |
| AGCTAAACCCCCGGATCTAC+CGG | - | chr3.3:57107634-57107653 | None:intergenic | 55.0% | |
| ATGTCTCGTGCTTGGAAGCC+AGG | + | chr3.3:57106311-57106330 | MS.gene55682:CDS | 55.0% | |
| CACGGGCAGCATCAACCTTA+TGG | - | chr3.3:57106391-57106410 | None:intergenic | 55.0% | |
| CTGTCTCATAGGTCGAGTCC+TGG | + | chr3.3:57106250-57106269 | MS.gene55682:CDS | 55.0% | |
| GACGAGACCTTCCTCAGACA+AGG | - | chr3.3:57106186-57106205 | None:intergenic | 55.0% | |
| GATGGCTGCGACATAGAGAC+AGG | - | chr3.3:57106914-57106933 | None:intergenic | 55.0% | |
| GCTGCCCGTGTTCTTGATGA+AGG | + | chr3.3:57106401-57106420 | MS.gene55682:CDS | 55.0% | |
| GGAATCTGTAGCCGAGGTGT+AGG | - | chr3.3:57108146-57108165 | None:intergenic | 55.0% | |
| GGACGACACCAGGGGAAATA+CGG | - | chr3.3:57106463-57106482 | None:intergenic | 55.0% | |
| GGTCTCACCTTGTCTGAGGA+AGG | + | chr3.3:57106176-57106195 | MS.gene55682:CDS | 55.0% | |
| GTAACCCGAGCACCAATGGA+CGG | - | chr3.3:57107177-57107196 | None:intergenic | 55.0% | |
| TCAGGTCCATGGTGCATCCT+AGG | + | chr3.3:57107831-57107850 | MS.gene55682:intron | 55.0% | |
| TCTGCTTCCTGACCGTCCAT+TGG | + | chr3.3:57107162-57107181 | MS.gene55682:CDS | 55.0% | |
| TGACGGTCTCACCTTGTCTG+AGG | + | chr3.3:57106172-57106191 | MS.gene55682:CDS | 55.0% | |
| TGCCTTCAGCAGTGTTAGCG+CGG | - | chr3.3:57106964-57106983 | None:intergenic | 55.0% | |
| TTATCCGACGTTCCCGTCGA+AGG | + | chr3.3:57107954-57107973 | MS.gene55682:intron | 55.0% | |
| ! | ATGCGTGGCATCTAGAACCG+GGG | + | chr3.3:57108189-57108208 | MS.gene55682:CDS | 55.0% |
| ! | GCAGCAGCATTGAGAGGAGA+TGG | - | chr3.3:57106932-57106951 | None:intergenic | 55.0% |
| ! | GCATCTAGAACCGGGGTTCA+AGG | + | chr3.3:57108196-57108215 | MS.gene55682:CDS | 55.0% |
| !! | CCGGATTAAAGTGCCGGACT+AGG | - | chr3.3:57107515-57107534 | None:intergenic | 55.0% |
| !! | CTGATGATGGAGTCCGTAGC+TGG | + | chr3.3:57106816-57106835 | MS.gene55682:CDS | 55.0% |
| !! | GATGATGGAGTCCGTAGCTG+GGG | + | chr3.3:57106818-57106837 | MS.gene55682:CDS | 55.0% |
| CACTCGGACTACCTACACCC+CGG | - | chr3.3:57107473-57107492 | None:intergenic | 60.0% | |
| CCTAGGCAGGCCTGATCATC+AGG | - | chr3.3:57107424-57107443 | None:intergenic | 60.0% | |
| CCTGATGATCAGGCCTGCCT+AGG | + | chr3.3:57107421-57107440 | MS.gene55682:intron | 60.0% | |
| CTCAATGCTGCTGCTCCTGC+TGG | + | chr3.3:57106938-57106957 | MS.gene55682:CDS | 60.0% | |
| CTCCACGTGCGGTGGAAGAA+AGG | + | chr3.3:57108009-57108028 | MS.gene55682:intron | 60.0% | |
| GAGGTCGTAGATCAGCCGCT+TGG | + | chr3.3:57107778-57107797 | MS.gene55682:intron | 60.0% | |
| GCAGGTAACCCGAGCACCAA+TGG | - | chr3.3:57107181-57107200 | None:intergenic | 60.0% | |
| GCGAGCGTATGTCTCGTGCT+TGG | + | chr3.3:57106303-57106322 | MS.gene55682:CDS | 60.0% | |
| GCTTGGAATTGCCGGGGTGT+AGG | + | chr3.3:57107459-57107478 | MS.gene55682:intron | 60.0% | |
| GTGCGGAGGACATGTGCGAA+TGG | + | chr3.3:57108282-57108301 | MS.gene55682:intron | 60.0% | |
| TCTTGGTACTCCACGTGCGG+TGG | + | chr3.3:57108001-57108020 | MS.gene55682:intron | 60.0% | |
| ! | CCTGACCGTCCATTGGTGCT+CGG | + | chr3.3:57107169-57107188 | MS.gene55682:CDS | 60.0% |
| ! | CTGACCGTCCATTGGTGCTC+GGG | + | chr3.3:57107170-57107189 | MS.gene55682:CDS | 60.0% |
| ! | GCAGGAGCAGCAGCATTGAG+AGG | - | chr3.3:57106938-57106957 | None:intergenic | 60.0% |
| ! | GTAGACCGCACCGGTAGATC+CGG | + | chr3.3:57107621-57107640 | MS.gene55682:intron | 60.0% |
| ! | TAGACCGCACCGGTAGATCC+GGG | + | chr3.3:57107622-57107641 | MS.gene55682:intron | 60.0% |
| !! | GAGACACGGCTTGGTGCTAC+AGG | + | chr3.3:57108365-57108384 | MS.gene55682:intron | 60.0% |
| !! | TGGTGCTACAGGCGAAGCTC+AGG | + | chr3.3:57108376-57108395 | MS.gene55682:intron | 60.0% |
| AACCCCCGGATCTACCGGTG+CGG | - | chr3.3:57107629-57107648 | None:intergenic | 65.0% | |
| CCGAGCACCAATGGACGGTC+AGG | - | chr3.3:57107172-57107191 | None:intergenic | 65.0% | |
| CTGCTGCCCTCTTCCTCCAC+AGG | + | chr3.3:57107124-57107143 | MS.gene55682:CDS | 65.0% | |
| GGCCGCGCTAACACTGCTGA+AGG | + | chr3.3:57106959-57106978 | MS.gene55682:CDS | 65.0% | |
| ! | AGACCGCACCGGTAGATCCG+GGG | + | chr3.3:57107623-57107642 | MS.gene55682:intron | 65.0% |
| GCAGTGTTAGCGCGGCCAGC+AGG | - | chr3.3:57106956-57106975 | None:intergenic | 70.0% | |
| ! | GACCGCACCGGTAGATCCGG+GGG | + | chr3.3:57107624-57107643 | MS.gene55682:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 57106149 | 57108548 | 57106149 | ID=MS.gene55682 |
| chr3.3 | mRNA | 57106149 | 57108548 | 57106149 | ID=MS.gene55682.t1;Parent=MS.gene55682 |
| chr3.3 | exon | 57106149 | 57107405 | 57106149 | ID=MS.gene55682.t1.exon1;Parent=MS.gene55682.t1 |
| chr3.3 | CDS | 57106149 | 57107405 | 57106149 | ID=cds.MS.gene55682.t1;Parent=MS.gene55682.t1 |
| chr3.3 | exon | 57108092 | 57108241 | 57108092 | ID=MS.gene55682.t1.exon2;Parent=MS.gene55682.t1 |
| chr3.3 | CDS | 57108092 | 57108241 | 57108092 | ID=cds.MS.gene55682.t1;Parent=MS.gene55682.t1 |
| chr3.3 | exon | 57108387 | 57108548 | 57108387 | ID=MS.gene55682.t1.exon3;Parent=MS.gene55682.t1 |
| chr3.3 | CDS | 57108387 | 57108548 | 57108387 | ID=cds.MS.gene55682.t1;Parent=MS.gene55682.t1 |
| Gene Sequence |
| Protein sequence |
