Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04134.t1 | KEH26371.1 | 78.2 | 464 | 39 | 4 | 84 | 493 | 1 | 456 | 9.60E-191 | 676.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04134.t1 | A0A072UAE7 | 78.2 | 464 | 39 | 4 | 84 | 493 | 1 | 456 | 6.9e-191 | 676.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04134.t1 | MTR_6g053230 | 76.940 | 464 | 45 | 4 | 84 | 493 | 1 | 456 | 0.0 | 645 |
| MS.gene04134.t1 | MTR_8g463110 | 44.218 | 147 | 68 | 2 | 475 | 614 | 135 | 274 | 4.14e-32 | 132 |
| MS.gene04134.t1 | MTR_1g100687 | 46.324 | 136 | 71 | 1 | 475 | 608 | 71 | 206 | 1.16e-31 | 123 |
| MS.gene04134.t1 | MTR_0042s0130 | 46.512 | 129 | 62 | 1 | 493 | 614 | 192 | 320 | 6.43e-28 | 115 |
| MS.gene04134.t1 | MTR_6g009010 | 40.458 | 131 | 78 | 0 | 465 | 595 | 132 | 262 | 8.68e-25 | 104 |
| MS.gene04134.t1 | MTR_4g020630 | 42.466 | 146 | 62 | 3 | 475 | 613 | 79 | 209 | 2.51e-23 | 104 |
| MS.gene04134.t1 | MTR_1g051330 | 40.833 | 120 | 70 | 1 | 495 | 614 | 310 | 428 | 5.36e-23 | 104 |
| MS.gene04134.t1 | MTR_3g044860 | 48.485 | 99 | 51 | 0 | 475 | 573 | 27 | 125 | 9.66e-22 | 96.7 |
| MS.gene04134.t1 | MTR_6g034215 | 39.286 | 140 | 67 | 1 | 475 | 614 | 157 | 278 | 6.38e-21 | 94.7 |
| MS.gene04134.t1 | MTR_8g470880 | 52.564 | 78 | 37 | 0 | 491 | 568 | 446 | 523 | 4.52e-19 | 91.3 |
| MS.gene04134.t1 | MTR_0015s0120 | 63.768 | 69 | 25 | 0 | 546 | 614 | 1 | 69 | 6.59e-19 | 89.4 |
| MS.gene04134.t1 | MTR_2g055450 | 37.143 | 140 | 73 | 1 | 475 | 614 | 191 | 315 | 9.14e-19 | 89.4 |
| MS.gene04134.t1 | MTR_2g018005 | 51.064 | 94 | 36 | 3 | 458 | 548 | 144 | 230 | 1.35e-17 | 82.8 |
| MS.gene04134.t1 | MTR_6g034715 | 40.952 | 105 | 51 | 1 | 451 | 555 | 50 | 143 | 4.08e-17 | 79.7 |
| MS.gene04134.t1 | MTR_0123s0050 | 65.306 | 49 | 17 | 0 | 494 | 542 | 2 | 50 | 4.25e-16 | 73.9 |
| MS.gene04134.t1 | MTR_3g024240 | 37.273 | 110 | 61 | 1 | 131 | 232 | 50 | 159 | 6.98e-16 | 76.6 |
| MS.gene04134.t1 | MTR_0114s0080 | 60.714 | 56 | 22 | 0 | 491 | 546 | 74 | 129 | 1.67e-15 | 74.3 |
| MS.gene04134.t1 | MTR_0112s0060 | 59.649 | 57 | 23 | 0 | 491 | 547 | 52 | 108 | 1.81e-15 | 73.6 |
| MS.gene04134.t1 | MTR_6g046587 | 48.718 | 78 | 39 | 1 | 495 | 572 | 205 | 281 | 6.83e-14 | 72.8 |
| MS.gene04134.t1 | MTR_6g033215 | 24.883 | 213 | 100 | 5 | 78 | 231 | 69 | 280 | 1.09e-13 | 72.4 |
| MS.gene04134.t1 | MTR_8g468010 | 51.852 | 54 | 26 | 0 | 169 | 222 | 9 | 62 | 4.68e-13 | 67.4 |
| MS.gene04134.t1 | MTR_4g020545 | 33.628 | 113 | 59 | 2 | 168 | 280 | 137 | 233 | 8.58e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 167 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAAATGTGAGAGCATTAA+AGG | 0.188980 | 3.1:+45422595 | None:intergenic |
| AGGCAACACTCTTCTGTTAT+TGG | 0.228345 | 3.1:+45420022 | None:intergenic |
| ACAGATATGACGTTGAAATT+TGG | 0.229855 | 3.1:-45422663 | MS.gene04134:CDS |
| AATGACATATCCTTGAAATT+AGG | 0.234281 | 3.1:+45422637 | None:intergenic |
| AAAATCCCTCCAAATCTTCT+TGG | 0.246895 | 3.1:+45422568 | None:intergenic |
| TATGATATCAATAATTATTA+TGG | 0.263716 | 3.1:-45421924 | MS.gene04134:CDS |
| TCAGCGGCTCATTGACATTC+AGG | 0.272524 | 3.1:+45421868 | None:intergenic |
| GGATGGCCCACGTGATTTAC+AGG | 0.285518 | 3.1:-45421019 | MS.gene04134:CDS |
| TTGCTTGAGCTGTGCGTTGT+TGG | 0.290068 | 3.1:-45422286 | MS.gene04134:CDS |
| TTTCTGAAACCAAGAAGATT+TGG | 0.291807 | 3.1:-45422577 | MS.gene04134:CDS |
| GTTGGGATTGCTCAGCCTTA+TGG | 0.305597 | 3.1:-45422514 | MS.gene04134:CDS |
| AAAGTCTCTCCTGCATGAAT+TGG | 0.311019 | 3.1:+45422233 | None:intergenic |
| ACTATTAGAAGGTTAGTTAA+TGG | 0.317260 | 3.1:-45421345 | MS.gene04134:intron |
| CAAACAACTCTCATGCTAAC+AGG | 0.322414 | 3.1:-45421252 | MS.gene04134:CDS |
| TAACGACCTGATGCTTTATA+AGG | 0.322491 | 3.1:-45422488 | MS.gene04134:CDS |
| CAGGTATTTAATATCCCCTT+TGG | 0.335280 | 3.1:-45422005 | MS.gene04134:CDS |
| ATTATCTGCCTGAGTTGTAC+TGG | 0.349619 | 3.1:+45420912 | None:intergenic |
| GCATGAGGACCTGGCGTATC+TGG | 0.365015 | 3.1:-45421976 | MS.gene04134:CDS |
| TGCTGGACCATTGGTGATAA+GGG | 0.367384 | 3.1:-45421040 | MS.gene04134:CDS |
| CTGCTGGACCATTGGTGATA+AGG | 0.369181 | 3.1:-45421041 | MS.gene04134:CDS |
| TGCTTGAGCTGTGCGTTGTT+GGG | 0.370896 | 3.1:-45422285 | MS.gene04134:CDS |
| TCCAGCGAGCATGCCCTGTT+TGG | 0.371005 | 3.1:-45421501 | MS.gene04134:CDS |
| GCGCTCTTGCAACTGAAAAC+TGG | 0.382405 | 3.1:-45420133 | MS.gene04134:CDS |
| CTTTCAAAACTTTGGCGTCC+TGG | 0.385917 | 3.1:-45422214 | MS.gene04134:CDS |
| TATTCCAACTTATCAACAAT+CGG | 0.391040 | 3.1:+45419915 | None:intergenic |
| GTATCTGGTTGGATGTCATA+TGG | 0.403499 | 3.1:-45421961 | MS.gene04134:CDS |
| TCCTTTCAATGTGGTGGTGA+TGG | 0.410961 | 3.1:-45421529 | MS.gene04134:CDS |
| GAATCTGCCAGCACCTTCTT+CGG | 0.412434 | 3.1:-45420081 | MS.gene04134:CDS |
| TCCAAACAGGGCATGCTCGC+TGG | 0.414109 | 3.1:+45421500 | None:intergenic |
| TATCTGGTTGGATGTCATAT+GGG | 0.418190 | 3.1:-45421960 | MS.gene04134:CDS |
| TACCTCGTCCTCCATCATTA+TGG | 0.418478 | 3.1:+45421589 | None:intergenic |
| AGATTCTCAAGAACTGCATC+AGG | 0.423366 | 3.1:+45420098 | None:intergenic |
| TATACATGGTTTAAAAGTCT+TGG | 0.424519 | 3.1:-45420188 | MS.gene04134:CDS |
| CAGCAGAGCCCCATCAGTTA+TGG | 0.428386 | 3.1:+45421149 | None:intergenic |
| TGAGTAATCGTTCTGTTGGC+GGG | 0.428696 | 3.1:-45421665 | MS.gene04134:CDS |
| GCAATCCCAACAAATCTTCT+CGG | 0.431308 | 3.1:+45422526 | None:intergenic |
| GATGGGAGCTTGAGATTGAT+TGG | 0.432122 | 3.1:-45421201 | MS.gene04134:CDS |
| CATGGTGGCTGTACTTGAAC+AGG | 0.433443 | 3.1:-45420884 | MS.gene04134:CDS |
| GGGGTGTAACTGTGAATAAA+TGG | 0.438050 | 3.1:-45421644 | MS.gene04134:CDS |
| AATAATTCAGCAGGAAATGA+TGG | 0.438381 | 3.1:-45421219 | MS.gene04134:CDS |
| GGTTCAGATTTGAGAACGTC+TGG | 0.443195 | 3.1:-45419998 | MS.gene04134:CDS |
| AGGAGAGACTTTCAAAACTT+TGG | 0.446001 | 3.1:-45422222 | MS.gene04134:CDS |
| ACCATTCCTTATAAAGCATC+AGG | 0.452812 | 3.1:+45422482 | None:intergenic |
| GTTCTCTTCCACCTGATCAA+TGG | 0.454334 | 3.1:+45422180 | None:intergenic |
| CTCATGCTAACAGGGAATAC+AGG | 0.458584 | 3.1:-45421243 | MS.gene04134:CDS |
| TTGTGGATGGTGTGCAACTG+TGG | 0.459245 | 3.1:-45421704 | MS.gene04134:CDS |
| CAGAAGGTTACCTTTATACA+TGG | 0.462432 | 3.1:-45420202 | MS.gene04134:CDS |
| TGAACAGGAAGCAAGTGATA+TGG | 0.463030 | 3.1:-45420869 | MS.gene04134:CDS |
| TCACCAAATGCATCCTCAGC+TGG | 0.468241 | 3.1:-45422334 | MS.gene04134:CDS |
| GGTATGGCTGCTGCTAATGC+TGG | 0.468986 | 3.1:-45421324 | MS.gene04134:CDS |
| CTTGCGCACACCACCCGCCC+TGG | 0.469090 | 3.1:+45421096 | None:intergenic |
| TTGCCCGATTGTTGATAAGT+TGG | 0.471683 | 3.1:-45419919 | MS.gene04134:CDS |
| ACTGATAAGTGGAGTTCCTA+TGG | 0.473400 | 3.1:-45419945 | MS.gene04134:CDS |
| GTAGTTTCGTCACTGATAAG+TGG | 0.473839 | 3.1:-45419956 | MS.gene04134:CDS |
| ACACATTTCTGCTGGACCAT+TGG | 0.474839 | 3.1:-45421049 | MS.gene04134:CDS |
| ACAAACTTCTGCACCAGGGC+GGG | 0.474928 | 3.1:-45421109 | MS.gene04134:CDS |
| GATCCAGCTGAGGATGCATT+TGG | 0.477067 | 3.1:+45422331 | None:intergenic |
| AGAGTTGTTTGCTGATGTGT+TGG | 0.479133 | 3.1:+45421264 | None:intergenic |
| ATCAGGTCGTTAACTCCATA+AGG | 0.479852 | 3.1:+45422499 | None:intergenic |
| CCAAGGTGTTACCATTGATC+AGG | 0.481589 | 3.1:-45422191 | MS.gene04134:intron |
| CTGCTGAATGAAGGAGATGC+TGG | 0.482460 | 3.1:-45421132 | MS.gene04134:CDS |
| TTTAATCCGAGAAGATTTGT+TGG | 0.486363 | 3.1:-45422532 | MS.gene04134:CDS |
| TTGACAAGACACATTTCTGC+TGG | 0.486906 | 3.1:-45421057 | MS.gene04134:CDS |
| CTGAGTAATCGTTCTGTTGG+CGG | 0.487085 | 3.1:-45421666 | MS.gene04134:CDS |
| AACAGGGCATGCTCGCTGGA+AGG | 0.488239 | 3.1:+45421504 | None:intergenic |
| AATGATGGAGGACGAGGTAC+TGG | 0.488628 | 3.1:-45421585 | MS.gene04134:CDS |
| TTAATCCGAGAAGATTTGTT+GGG | 0.489768 | 3.1:-45422531 | MS.gene04134:CDS |
| TCCTCATGCATAAAACCAAA+GGG | 0.491411 | 3.1:+45421990 | None:intergenic |
| CTGAAACCAAGAAGATTTGG+AGG | 0.491482 | 3.1:-45422574 | MS.gene04134:CDS |
| AAGACGTTCCTCAACAGCTC+TGG | 0.492370 | 3.1:+45420160 | None:intergenic |
| AGTTAAAATCATACGTGGTA+GGG | 0.493546 | 3.1:-45421475 | MS.gene04134:CDS |
| TGTGGATGGTGTGCAACTGT+GGG | 0.496191 | 3.1:-45421703 | MS.gene04134:CDS |
| CAGCGGCTCATTGACATTCA+GGG | 0.496441 | 3.1:+45421869 | None:intergenic |
| AATTTGGCATCCTAATTTCA+AGG | 0.498110 | 3.1:-45422647 | MS.gene04134:CDS |
| GGTAAAGCAAAAGAAGCATC+TGG | 0.500747 | 3.1:-45420961 | MS.gene04134:CDS |
| CGAGGTACTGGTAGTAGTAA+TGG | 0.503983 | 3.1:-45421573 | MS.gene04134:CDS |
| GGTCGTGGCGGCCATAATGA+TGG | 0.505206 | 3.1:-45421600 | MS.gene04134:CDS |
| GAAATGTGTCTTGTCAATAC+CGG | 0.506539 | 3.1:+45421063 | None:intergenic |
| ATCCTCTGATTTGTCTCAAG+AGG | 0.506782 | 3.1:-45422311 | MS.gene04134:CDS |
| GAGTTAAAATCATACGTGGT+AGG | 0.506824 | 3.1:-45421476 | MS.gene04134:CDS |
| CCTTTCAATGTGGTGGTGAT+GGG | 0.511010 | 3.1:-45421528 | MS.gene04134:CDS |
| AATACAGGTAATAATTCAGC+AGG | 0.515430 | 3.1:-45421228 | MS.gene04134:CDS |
| TAGAAGGTTAGTTAATGGTA+TGG | 0.515635 | 3.1:-45421340 | MS.gene04134:intron |
| GAGTTGTTTGCTGATGTGTT+GGG | 0.518616 | 3.1:+45421265 | None:intergenic |
| GTGCGCAAGTAAGAAGAAAC+CGG | 0.524494 | 3.1:-45421082 | MS.gene04134:CDS |
| GGTGGTAGAATGGCTGGTCG+TGG | 0.524757 | 3.1:-45421615 | MS.gene04134:CDS |
| ACCTGATGCTTTATAAGGAA+TGG | 0.526263 | 3.1:-45422483 | MS.gene04134:CDS |
| ACAGGGCATGCTCGCTGGAA+GGG | 0.527776 | 3.1:+45421505 | None:intergenic |
| TCTGAATTCTCCATAACTGA+TGG | 0.528908 | 3.1:-45421159 | MS.gene04134:CDS |
| ATTCCAACTTATCAACAATC+GGG | 0.530661 | 3.1:+45419916 | None:intergenic |
| GTTAAAATCATACGTGGTAG+GGG | 0.532566 | 3.1:-45421474 | MS.gene04134:CDS |
| CTGAATTCTCCATAACTGAT+GGG | 0.533167 | 3.1:-45421158 | MS.gene04134:CDS |
| CCCATCACCACCACATTGAA+AGG | 0.534754 | 3.1:+45421528 | None:intergenic |
| TGGCACCACCAGAGCTGTTG+AGG | 0.542520 | 3.1:-45420168 | MS.gene04134:CDS |
| AGTGACGAAACTACTAAAGC+CGG | 0.545193 | 3.1:+45419965 | None:intergenic |
| GGAAGCAAGTGATATGGTGC+TGG | 0.545419 | 3.1:-45420863 | MS.gene04134:CDS |
| AATACGCATGTACATCCGCC+AGG | 0.549915 | 3.1:+45421899 | None:intergenic |
| GATGGGGCTCTGCTGAATGA+AGG | 0.554620 | 3.1:-45421141 | MS.gene04134:CDS |
| TAGTGATCCGAAGAAGGTGC+TGG | 0.554743 | 3.1:+45420074 | None:intergenic |
| TTGCGTGGTGGTAGAATGGC+TGG | 0.557858 | 3.1:-45421621 | MS.gene04134:CDS |
| GTCCTCATGCATAAAACCAA+AGG | 0.562425 | 3.1:+45421989 | None:intergenic |
| AATACACAATGTGAAGGTAA+AGG | 0.562950 | 3.1:-45420982 | MS.gene04134:CDS |
| AACTTCTGCACCAGGGCGGG+TGG | 0.564141 | 3.1:-45421106 | MS.gene04134:CDS |
| TTATCTGCCTGAGTTGTACT+GGG | 0.565780 | 3.1:+45420913 | None:intergenic |
| AAACTTTGGCGTCCTGGCCA+AGG | 0.566458 | 3.1:-45422208 | MS.gene04134:CDS |
| ATGGTTGCGTGGTGGTAGAA+TGG | 0.566503 | 3.1:-45421625 | MS.gene04134:CDS |
| AACGTCTGGTTAGCTGATCC+CGG | 0.566855 | 3.1:-45419984 | MS.gene04134:CDS |
| GTGCTTCTGATCTCACAGAC+TGG | 0.573288 | 3.1:-45419890 | MS.gene04134:CDS |
| GCTGGACAAACTTCTGCACC+AGG | 0.573309 | 3.1:-45421114 | MS.gene04134:CDS |
| GAGTAATCGTTCTGTTGGCG+GGG | 0.574106 | 3.1:-45421664 | MS.gene04134:CDS |
| ATGGTGTTCGAGAAAGAAGA+TGG | 0.578984 | 3.1:-45421837 | MS.gene04134:intron |
| AATCTGAGTAATCGTTCTGT+TGG | 0.580908 | 3.1:-45421669 | MS.gene04134:CDS |
| TGCACACCATCCACAAAACC+AGG | 0.582135 | 3.1:+45421711 | None:intergenic |
| GGCCATAATGATGGAGGACG+AGG | 0.583296 | 3.1:-45421591 | MS.gene04134:CDS |
| ATAATTCAGCAGGAAATGAT+GGG | 0.586754 | 3.1:-45421218 | MS.gene04134:CDS |
| TCAATAATTATTATGGACCC+TGG | 0.587781 | 3.1:-45421917 | MS.gene04134:CDS |
| ACGTTCCTCAACAGCTCTGG+TGG | 0.588358 | 3.1:+45420163 | None:intergenic |
| AGTAATCGTTCTGTTGGCGG+GGG | 0.590654 | 3.1:-45421663 | MS.gene04134:CDS |
| GTGACGAAACTACTAAAGCC+GGG | 0.592764 | 3.1:+45419966 | None:intergenic |
| GATGTACATGCGTATTCGTG+TGG | 0.594729 | 3.1:-45421892 | MS.gene04134:CDS |
| TGAAACCAAGAAGATTTGGA+GGG | 0.594774 | 3.1:-45422573 | MS.gene04134:CDS |
| AAACAACTCTCATGCTAACA+GGG | 0.597160 | 3.1:-45421251 | MS.gene04134:CDS |
| GGGCCATCCCTTATCACCAA+TGG | 0.597570 | 3.1:+45421033 | None:intergenic |
| GGTGCGGTTCCAATTCATGC+AGG | 0.598898 | 3.1:-45422242 | MS.gene04134:CDS |
| ATGGCTGCTGCTAATGCTGG+AGG | 0.599082 | 3.1:-45421321 | MS.gene04134:CDS |
| GAGGACCTGGCGTATCTGGT+TGG | 0.599461 | 3.1:-45421972 | MS.gene04134:CDS |
| ATAGCGTAGTGATCCGAAGA+AGG | 0.601913 | 3.1:+45420068 | None:intergenic |
| TGCATGAATTGGAACCGCAC+CGG | 0.602172 | 3.1:+45422244 | None:intergenic |
| TCAGGCAGATAATGCAAGCA+TGG | 0.606881 | 3.1:-45420902 | MS.gene04134:CDS |
| GACATCCAACCAGATACGCC+AGG | 0.612341 | 3.1:+45421967 | None:intergenic |
| AACAATCGGGCAAACTCCAT+AGG | 0.614031 | 3.1:+45419929 | None:intergenic |
| ATCTGGTTGGATGTCATATG+GGG | 0.614751 | 3.1:-45421959 | MS.gene04134:CDS |
| GGCGTTGCTGATGTTAATGA+AGG | 0.617492 | 3.1:-45421552 | MS.gene04134:CDS |
| GGTAGAATGGCTGGTCGTGG+CGG | 0.619693 | 3.1:-45421612 | MS.gene04134:CDS |
| CCTGATCAATGGTAACACCT+TGG | 0.619987 | 3.1:+45422191 | None:intergenic |
| TCAATGGTAACACCTTGGCC+AGG | 0.620634 | 3.1:+45422196 | None:intergenic |
| ATAACAGAAGAGTGTTGCCT+CGG | 0.624082 | 3.1:-45420019 | MS.gene04134:CDS |
| ACACAAAATACACAATGTGA+AGG | 0.624542 | 3.1:-45420988 | MS.gene04134:CDS |
| AATTCGACCCAGTACAACTC+AGG | 0.625472 | 3.1:-45420920 | MS.gene04134:CDS |
| TGAAGGTCCTTTCAATGTGG+TGG | 0.626039 | 3.1:-45421535 | MS.gene04134:CDS |
| AGAATTCAGAACTAGTCACT+TGG | 0.627096 | 3.1:+45421172 | None:intergenic |
| TGAATTCTCCATAACTGATG+GGG | 0.628038 | 3.1:-45421157 | MS.gene04134:CDS |
| GTGCTGGACTATGTGAATGA+AGG | 0.628206 | 3.1:-45420847 | MS.gene04134:intron |
| GAAGCTGTTGACTGACAAGC+CGG | 0.633439 | 3.1:-45422263 | MS.gene04134:CDS |
| GGACCATTGGTGATAAGGGA+TGG | 0.635357 | 3.1:-45421036 | MS.gene04134:CDS |
| GACAAACTTCTGCACCAGGG+CGG | 0.636041 | 3.1:-45421110 | MS.gene04134:CDS |
| TGCACAACCTGTAAATCACG+TGG | 0.636937 | 3.1:+45421012 | None:intergenic |
| TGAGCCGCTGAAGACATGTA+TGG | 0.652025 | 3.1:-45421856 | MS.gene04134:CDS |
| CGTGGCGGCCATAATGATGG+AGG | 0.666240 | 3.1:-45421597 | MS.gene04134:CDS |
| GTGGATGGTGTGCAACTGTG+GGG | 0.668574 | 3.1:-45421702 | MS.gene04134:CDS |
| AACACCATACATGTCTTCAG+CGG | 0.670801 | 3.1:+45421852 | None:intergenic |
| GATTCTCAAGAACTGCATCA+GGG | 0.673744 | 3.1:+45420099 | None:intergenic |
| GGCAGATAATGCAAGCATGG+TGG | 0.676964 | 3.1:-45420899 | MS.gene04134:CDS |
| GTGTTGTGTCACATTTACCA+TGG | 0.676986 | 3.1:-45422383 | MS.gene04134:CDS |
| TGTTGACTGACAAGCCGGTG+CGG | 0.678517 | 3.1:-45422258 | MS.gene04134:CDS |
| ATACGCATGTACATCCGCCA+GGG | 0.684960 | 3.1:+45421900 | None:intergenic |
| CAAATCAGAGGATCCAGCTG+AGG | 0.690215 | 3.1:+45422321 | None:intergenic |
| AGCCTCTTGAGACAAATCAG+AGG | 0.691044 | 3.1:+45422309 | None:intergenic |
| CTGGACAAACTTCTGCACCA+GGG | 0.700954 | 3.1:-45421113 | MS.gene04134:CDS |
| GTGAATAAATGGTTGCGTGG+TGG | 0.701823 | 3.1:-45421633 | MS.gene04134:CDS |
| GGAAGAGTTAAAATCATACG+TGG | 0.712787 | 3.1:-45421480 | MS.gene04134:CDS |
| ACTGTGAATAAATGGTTGCG+TGG | 0.719427 | 3.1:-45421636 | MS.gene04134:CDS |
| ATAATTATTATGGACCCTGG+CGG | 0.719755 | 3.1:-45421914 | MS.gene04134:CDS |
| ACGTTCTCAAATCTGAACCG+AGG | 0.723251 | 3.1:+45420002 | None:intergenic |
| CCTCATGCATAAAACCAAAG+GGG | 0.728043 | 3.1:+45421991 | None:intergenic |
| GCACAACCTGTAAATCACGT+GGG | 0.763972 | 3.1:+45421013 | None:intergenic |
| TAATGAAGGTCCTTTCAATG+TGG | 0.766457 | 3.1:-45421538 | MS.gene04134:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGATATCAATAATTATTA+TGG | - | chr3.1:45420289-45420308 | MS.gene04134:intron | 10.0% |
| !! | AAATAATTAGTTGGAATTGT+AGG | - | chr3.1:45421492-45421511 | MS.gene04134:CDS | 20.0% |
| !! | AATAATTAGTTGGAATTGTA+GGG | - | chr3.1:45421493-45421512 | MS.gene04134:CDS | 20.0% |
| !! | ACAATTGTTTCAGTAAATAA+AGG | + | chr3.1:45421432-45421451 | None:intergenic | 20.0% |
| !! | ATTTACTGAAACAATTGTAA+TGG | - | chr3.1:45421434-45421453 | MS.gene04134:intron | 20.0% |
| !! | CAATTGTTTCAGTAAATAAA+GGG | + | chr3.1:45421431-45421450 | None:intergenic | 20.0% |
| !! | TTCATCAGTTTAATGAATTA+AGG | - | chr3.1:45422437-45422456 | MS.gene04134:CDS | 20.0% |
| !! | TTTGTATTGTTCAGATTAAA+AGG | + | chr3.1:45420832-45420851 | None:intergenic | 20.0% |
| !!! | ATTCCAACTAATTATTTTCA+TGG | + | chr3.1:45421489-45421508 | None:intergenic | 20.0% |
| !!! | ATTTTAAACTAGGAATTGTA+CGG | + | chr3.1:45421532-45421551 | None:intergenic | 20.0% |
| !!! | TTATTTTGTTGATTTGTTTC+AGG | - | chr3.1:45422666-45422685 | MS.gene04134:CDS | 20.0% |
| ! | AATGACATATCCTTGAAATT+AGG | + | chr3.1:45419579-45419598 | None:intergenic | 25.0% |
| ! | ATAATTAGTTGGAATTGTAG+GGG | - | chr3.1:45421494-45421513 | MS.gene04134:CDS | 25.0% |
| ! | ATCAGTTTAATGAATTAAGG+AGG | - | chr3.1:45422440-45422459 | MS.gene04134:CDS | 25.0% |
| ! | GAGATAACAGATACTAATAA+AGG | - | chr3.1:45421758-45421777 | MS.gene04134:intron | 25.0% |
| ! | TAACAAAATTCATTCGTTGT+TGG | - | chr3.1:45422588-45422607 | MS.gene04134:CDS | 25.0% |
| ! | TATACATGGTTTAAAAGTCT+TGG | - | chr3.1:45422025-45422044 | MS.gene04134:intron | 25.0% |
| ! | TATTCCAACTTATCAACAAT+CGG | + | chr3.1:45422301-45422320 | None:intergenic | 25.0% |
| ! | TCATTTAAATACGAGAAACT+TGG | - | chr3.1:45420415-45420434 | MS.gene04134:intron | 25.0% |
| !! | ACTATTAGAAGGTTAGTTAA+TGG | - | chr3.1:45420868-45420887 | MS.gene04134:CDS | 25.0% |
| !! | AGGAATTAAAGTATGTTTTG+GGG | - | chr3.1:45421621-45421640 | MS.gene04134:CDS | 25.0% |
| !! | ATCAACATTGAAATTTTCCA+TGG | + | chr3.1:45419850-45419869 | None:intergenic | 25.0% |
| !! | ATTCCAATTTTATCACCAAT+GGG | - | chr3.1:45420064-45420083 | MS.gene04134:CDS | 25.0% |
| !! | CTCTAAAAGTAATAAAACTG+AGG | - | chr3.1:45421601-45421620 | MS.gene04134:CDS | 25.0% |
| !! | GACTTTTAAACCATGTATAA+AGG | + | chr3.1:45422024-45422043 | None:intergenic | 25.0% |
| !! | GAGGAATTAAAGTATGTTTT+GGG | - | chr3.1:45421620-45421639 | MS.gene04134:CDS | 25.0% |
| !! | TATTCCAATTTTATCACCAA+TGG | - | chr3.1:45420063-45420082 | MS.gene04134:CDS | 25.0% |
| !! | TGAGGAATTAAAGTATGTTT+TGG | - | chr3.1:45421619-45421638 | MS.gene04134:CDS | 25.0% |
| !! | TGTTTTACTGTGAATAAACA+AGG | - | chr3.1:45421653-45421672 | MS.gene04134:CDS | 25.0% |
| !! | TTTTAAACTAGGAATTGTAC+GGG | + | chr3.1:45421531-45421550 | None:intergenic | 25.0% |
| !!! | ATTGATTTTCATCAGTAATC+CGG | + | chr3.1:45422627-45422646 | None:intergenic | 25.0% |
| AAAACCAAGTCACTATTAGA+AGG | - | chr3.1:45420857-45420876 | MS.gene04134:CDS | 30.0% | |
| AATAATTCAGCAGGAAATGA+TGG | - | chr3.1:45420994-45421013 | MS.gene04134:CDS | 30.0% | |
| AATACACAATGTGAAGGTAA+AGG | - | chr3.1:45421231-45421250 | MS.gene04134:CDS | 30.0% | |
| AATACAGGTAATAATTCAGC+AGG | - | chr3.1:45420985-45421004 | MS.gene04134:CDS | 30.0% | |
| AATTTACCGTGGTGTATAAT+AGG | - | chr3.1:45421872-45421891 | MS.gene04134:CDS | 30.0% | |
| AATTTGGCATCCTAATTTCA+AGG | - | chr3.1:45419566-45419585 | MS.gene04134:intron | 30.0% | |
| ACACAAAATACACAATGTGA+AGG | - | chr3.1:45421225-45421244 | MS.gene04134:CDS | 30.0% | |
| ACAGATATGACGTTGAAATT+TGG | - | chr3.1:45419550-45419569 | MS.gene04134:intron | 30.0% | |
| AGAAGAAGGGTAATAATGAA+AGG | - | chr3.1:45421924-45421943 | MS.gene04134:CDS | 30.0% | |
| AGATAGTTTCACAAAGATAG+AGG | + | chr3.1:45421583-45421602 | None:intergenic | 30.0% | |
| AGTTAAAATCATACGTGGTA+GGG | - | chr3.1:45420738-45420757 | MS.gene04134:intron | 30.0% | |
| ATAATTCAGCAGGAAATGAT+GGG | - | chr3.1:45420995-45421014 | MS.gene04134:CDS | 30.0% | |
| ATTCCAACTTATCAACAATC+GGG | + | chr3.1:45422300-45422319 | None:intergenic | 30.0% | |
| ATTTACCGTGGTGTATAATA+GGG | - | chr3.1:45421873-45421892 | MS.gene04134:CDS | 30.0% | |
| CAAATGTTTCAAATTTACCG+TGG | - | chr3.1:45421861-45421880 | MS.gene04134:CDS | 30.0% | |
| CAGATACTAATAAAGGTAAG+TGG | - | chr3.1:45421765-45421784 | MS.gene04134:intron | 30.0% | |
| CAGCCATGAAAATAATTAGT+TGG | - | chr3.1:45421483-45421502 | MS.gene04134:CDS | 30.0% | |
| CATGGAAGAACTTAGTATTA+AGG | + | chr3.1:45422543-45422562 | None:intergenic | 30.0% | |
| GAAGAAGGGTAATAATGAAA+GGG | - | chr3.1:45421925-45421944 | MS.gene04134:CDS | 30.0% | |
| TAATTAGTTGGAATTGTAGG+GGG | - | chr3.1:45421495-45421514 | MS.gene04134:CDS | 30.0% | |
| TACTGAAACAATTGTAATGG+CGG | - | chr3.1:45421437-45421456 | MS.gene04134:intron | 30.0% | |
| TCAATAATTATTATGGACCC+TGG | - | chr3.1:45420296-45420315 | MS.gene04134:intron | 30.0% | |
| TTTAAACTAGGAATTGTACG+GGG | + | chr3.1:45421530-45421549 | None:intergenic | 30.0% | |
| TTTAATCCGAGAAGATTTGT+TGG | - | chr3.1:45419681-45419700 | MS.gene04134:intron | 30.0% | |
| ! | AGAAATGTTGTTTGTGATTC+TGG | - | chr3.1:45421971-45421990 | MS.gene04134:CDS | 30.0% |
| ! | ATTTTATCACCAATGGGATA+TGG | - | chr3.1:45420070-45420089 | MS.gene04134:CDS | 30.0% |
| ! | GAAATGTTGTTTGTGATTCT+GGG | - | chr3.1:45421972-45421991 | MS.gene04134:CDS | 30.0% |
| ! | TAGAAGGTTAGTTAATGGTA+TGG | - | chr3.1:45420873-45420892 | MS.gene04134:CDS | 30.0% |
| ! | TATCCCATTGGTGATAAAAT+TGG | + | chr3.1:45420070-45420089 | None:intergenic | 30.0% |
| ! | TCCTCATTCTATCAATTTTC+TGG | + | chr3.1:45422396-45422415 | None:intergenic | 30.0% |
| ! | TTAATCCGAGAAGATTTGTT+GGG | - | chr3.1:45419682-45419701 | MS.gene04134:intron | 30.0% |
| !! | AAGTGTTATTGGTTCTAATG+GGG | - | chr3.1:45420786-45420805 | MS.gene04134:intron | 30.0% |
| !! | ACAAGTGTTATTGGTTCTAA+TGG | - | chr3.1:45420784-45420803 | MS.gene04134:intron | 30.0% |
| !! | AGAAAATGTGAGAGCATTAA+AGG | + | chr3.1:45419621-45419640 | None:intergenic | 30.0% |
| !! | CAAGTGTTATTGGTTCTAAT+GGG | - | chr3.1:45420785-45420804 | MS.gene04134:intron | 30.0% |
| !! | TTTCTGAAACCAAGAAGATT+TGG | - | chr3.1:45419636-45419655 | MS.gene04134:intron | 30.0% |
| !!! | GATTTTAACTCTTCCAAACA+GGG | + | chr3.1:45420728-45420747 | None:intergenic | 30.0% |
| !!! | TGATTTTAACTCTTCCAAAC+AGG | + | chr3.1:45420729-45420748 | None:intergenic | 30.0% |
| AAAATCCCTCCAAATCTTCT+TGG | + | chr3.1:45419648-45419667 | None:intergenic | 35.0% | |
| AAACAACTCTCATGCTAACA+GGG | - | chr3.1:45420962-45420981 | MS.gene04134:CDS | 35.0% | |
| AATCTGAGTAATCGTTCTGT+TGG | - | chr3.1:45420544-45420563 | MS.gene04134:intron | 35.0% | |
| AATTGATAGAATGAGGAGTC+AGG | - | chr3.1:45422399-45422418 | MS.gene04134:CDS | 35.0% | |
| ACCTGATGCTTTATAAGGAA+TGG | - | chr3.1:45419730-45419749 | MS.gene04134:intron | 35.0% | |
| ACTCAGCTGTTAATTCAAGA+GGG | - | chr3.1:45422469-45422488 | MS.gene04134:CDS | 35.0% | |
| AGAATTCAGAACTAGTCACT+TGG | + | chr3.1:45421044-45421063 | None:intergenic | 35.0% | |
| AGGAGAGACTTTCAAAACTT+TGG | - | chr3.1:45419991-45420010 | MS.gene04134:CDS | 35.0% | |
| ATAATTATTATGGACCCTGG+CGG | - | chr3.1:45420299-45420318 | MS.gene04134:intron | 35.0% | |
| ATGGAAAGAATCCTACAAGA+AGG | - | chr3.1:45420089-45420108 | MS.gene04134:CDS | 35.0% | |
| CAGAAGGTTACCTTTATACA+TGG | - | chr3.1:45422011-45422030 | MS.gene04134:intron | 35.0% | |
| CAGGTATTTAATATCCCCTT+TGG | - | chr3.1:45420208-45420227 | MS.gene04134:intron | 35.0% | |
| CTAACCTTCTAATAGTGACT+TGG | + | chr3.1:45420864-45420883 | None:intergenic | 35.0% | |
| CTGAATTCTCCATAACTGAT+GGG | - | chr3.1:45421055-45421074 | MS.gene04134:CDS | 35.0% | |
| GAAATGTGTCTTGTCAATAC+CGG | + | chr3.1:45421153-45421172 | None:intergenic | 35.0% | |
| GAGTTAAAATCATACGTGGT+AGG | - | chr3.1:45420737-45420756 | MS.gene04134:intron | 35.0% | |
| GCCAGAAAATTGATAGAATG+AGG | - | chr3.1:45422392-45422411 | MS.gene04134:CDS | 35.0% | |
| GGAAGAGTTAAAATCATACG+TGG | - | chr3.1:45420733-45420752 | MS.gene04134:intron | 35.0% | |
| GGATATCCGGTTTATAAACA+CGG | + | chr3.1:45421562-45421581 | None:intergenic | 35.0% | |
| GTTAAAATCATACGTGGTAG+GGG | - | chr3.1:45420739-45420758 | MS.gene04134:intron | 35.0% | |
| TAACGACCTGATGCTTTATA+AGG | - | chr3.1:45419725-45419744 | MS.gene04134:intron | 35.0% | |
| TAATGAAGGTCCTTTCAATG+TGG | - | chr3.1:45420675-45420694 | MS.gene04134:intron | 35.0% | |
| TATCTGGTTGGATGTCATAT+GGG | - | chr3.1:45420253-45420272 | MS.gene04134:intron | 35.0% | |
| TCACAAAGATAGAGGATATC+CGG | + | chr3.1:45421575-45421594 | None:intergenic | 35.0% | |
| TCCCTAATAATAGCAGAAGA+CGG | - | chr3.1:45421810-45421829 | MS.gene04134:intron | 35.0% | |
| TCCTAGATGAGGTTGAAATA+TGG | - | chr3.1:45420183-45420202 | MS.gene04134:CDS | 35.0% | |
| TCCTCATGCATAAAACCAAA+GGG | + | chr3.1:45420226-45420245 | None:intergenic | 35.0% | |
| TCTGAATTCTCCATAACTGA+TGG | - | chr3.1:45421054-45421073 | MS.gene04134:CDS | 35.0% | |
| TGAAACCAAGAAGATTTGGA+GGG | - | chr3.1:45419640-45419659 | MS.gene04134:intron | 35.0% | |
| TGAATTCTCCATAACTGATG+GGG | - | chr3.1:45421056-45421075 | MS.gene04134:CDS | 35.0% | |
| TGGAAAGAATCCTACAAGAA+GGG | - | chr3.1:45420090-45420109 | MS.gene04134:CDS | 35.0% | |
| TTATTACCCTTCTTCTCATG+AGG | + | chr3.1:45421920-45421939 | None:intergenic | 35.0% | |
| TTTACCGTGGTGTATAATAG+GGG | - | chr3.1:45421874-45421893 | MS.gene04134:CDS | 35.0% | |
| ! | ACCATTCCTTATAAAGCATC+AGG | + | chr3.1:45419734-45419753 | None:intergenic | 35.0% |
| ! | AGGTTAGTCACAAGTGTTAT+TGG | - | chr3.1:45420775-45420794 | MS.gene04134:intron | 35.0% |
| ! | CTAATTATTTTCATGGCTGC+TGG | + | chr3.1:45421482-45421501 | None:intergenic | 35.0% |
| ! | TGTTTTGTACTGGAATTCGT+CGG | - | chr3.1:45421691-45421710 | MS.gene04134:CDS | 35.0% |
| !! | AGTGTTATTGGTTCTAATGG+GGG | - | chr3.1:45420787-45420806 | MS.gene04134:intron | 35.0% |
| !! | CGGACAAGGTATTTTAAACT+AGG | + | chr3.1:45421542-45421561 | None:intergenic | 35.0% |
| !! | GAATTCTCTTTTTCACAGCA+GGG | + | chr3.1:45421278-45421297 | None:intergenic | 35.0% |
| !!! | TAATTCAAGAGGGTGCTTTT+TGG | - | chr3.1:45422479-45422498 | MS.gene04134:CDS | 35.0% |
| AAAGTCTCTCCTGCATGAAT+TGG | + | chr3.1:45419983-45420002 | None:intergenic | 40.0% | |
| AACACCATACATGTCTTCAG+CGG | + | chr3.1:45420364-45420383 | None:intergenic | 40.0% | |
| AAGTCCCCTATTATACACCA+CGG | + | chr3.1:45421881-45421900 | None:intergenic | 40.0% | |
| AATAAACAAGGTCAGAGTGG+TGG | - | chr3.1:45421665-45421684 | MS.gene04134:CDS | 40.0% | |
| ACTGATAAGTGGAGTTCCTA+TGG | - | chr3.1:45422268-45422287 | MS.gene04134:CDS | 40.0% | |
| ACTGTGAATAAATGGTTGCG+TGG | - | chr3.1:45420577-45420596 | MS.gene04134:intron | 40.0% | |
| AGATTCTCAAGAACTGCATC+AGG | + | chr3.1:45422118-45422137 | None:intergenic | 40.0% | |
| AGGCAACACTCTTCTGTTAT+TGG | + | chr3.1:45422194-45422213 | None:intergenic | 40.0% | |
| AGTGACGAAACTACTAAAGC+CGG | + | chr3.1:45422251-45422270 | None:intergenic | 40.0% | |
| ATCAGGTCGTTAACTCCATA+AGG | + | chr3.1:45419717-45419736 | None:intergenic | 40.0% | |
| ATCTGGTTGGATGTCATATG+GGG | - | chr3.1:45420254-45420273 | MS.gene04134:intron | 40.0% | |
| ATGAGGTTGAAATATGGCTC+AGG | - | chr3.1:45420189-45420208 | MS.gene04134:CDS | 40.0% | |
| ATGGTGTTCGAGAAAGAAGA+TGG | - | chr3.1:45420376-45420395 | MS.gene04134:intron | 40.0% | |
| ATTATCTGCCTGAGTTGTAC+TGG | + | chr3.1:45421304-45421323 | None:intergenic | 40.0% | |
| CAAACAACTCTCATGCTAAC+AGG | - | chr3.1:45420961-45420980 | MS.gene04134:CDS | 40.0% | |
| CCCGTCTTCTGCTATTATTA+GGG | + | chr3.1:45421814-45421833 | None:intergenic | 40.0% | |
| CCCTAATAATAGCAGAAGAC+GGG | - | chr3.1:45421811-45421830 | MS.gene04134:intron | 40.0% | |
| CCTCATGCATAAAACCAAAG+GGG | + | chr3.1:45420225-45420244 | None:intergenic | 40.0% | |
| CCTTGTCCGTGTTTATAAAC+CGG | - | chr3.1:45421553-45421572 | MS.gene04134:CDS | 40.0% | |
| CTGAAACCAAGAAGATTTGG+AGG | - | chr3.1:45419639-45419658 | MS.gene04134:intron | 40.0% | |
| CTTTCTCCTCATGAGAAGAA+GGG | - | chr3.1:45421911-45421930 | MS.gene04134:CDS | 40.0% | |
| GACTCAGCTGTTAATTCAAG+AGG | - | chr3.1:45422468-45422487 | MS.gene04134:CDS | 40.0% | |
| GATTCTCAAGAACTGCATCA+GGG | + | chr3.1:45422117-45422136 | None:intergenic | 40.0% | |
| GCAATCCCAACAAATCTTCT+CGG | + | chr3.1:45419690-45419709 | None:intergenic | 40.0% | |
| GCCATATTTCAACCTCATCT+AGG | + | chr3.1:45420187-45420206 | None:intergenic | 40.0% | |
| GGATTCTTTCCATATCCCAT+TGG | + | chr3.1:45420082-45420101 | None:intergenic | 40.0% | |
| GGGGTGTAACTGTGAATAAA+TGG | - | chr3.1:45420569-45420588 | MS.gene04134:intron | 40.0% | |
| GTAGTTTCGTCACTGATAAG+TGG | - | chr3.1:45422257-45422276 | MS.gene04134:CDS | 40.0% | |
| GTATCTGGTTGGATGTCATA+TGG | - | chr3.1:45420252-45420271 | MS.gene04134:intron | 40.0% | |
| GTCCTCATGCATAAAACCAA+AGG | + | chr3.1:45420227-45420246 | None:intergenic | 40.0% | |
| GTGAATAAACAAGGTCAGAG+TGG | - | chr3.1:45421662-45421681 | MS.gene04134:CDS | 40.0% | |
| GTGTTGTGTCACATTTACCA+TGG | - | chr3.1:45419830-45419849 | MS.gene04134:intron | 40.0% | |
| TAATAATAGCAGAAGACGGG+AGG | - | chr3.1:45421814-45421833 | MS.gene04134:intron | 40.0% | |
| TACTAAGTTCTTCCATGCTG+CGG | - | chr3.1:45422546-45422565 | MS.gene04134:CDS | 40.0% | |
| TCAGTAATCCGGTTGTTATC+TGG | + | chr3.1:45422616-45422635 | None:intergenic | 40.0% | |
| TCCCGTCTTCTGCTATTATT+AGG | + | chr3.1:45421815-45421834 | None:intergenic | 40.0% | |
| TCTTTCTCCTCATGAGAAGA+AGG | - | chr3.1:45421910-45421929 | MS.gene04134:CDS | 40.0% | |
| TGAAACAATTGTAATGGCGG+AGG | - | chr3.1:45421440-45421459 | MS.gene04134:intron | 40.0% | |
| TGAACAGGAAGCAAGTGATA+TGG | - | chr3.1:45421344-45421363 | MS.gene04134:intron | 40.0% | |
| TGCTATTGCTGTGGTATCTT+GGG | - | chr3.1:45420445-45420464 | MS.gene04134:intron | 40.0% | |
| TGGCGTCTTACTGGATATTA+TGG | - | chr3.1:45421785-45421804 | MS.gene04134:intron | 40.0% | |
| TGTTGGATCCAGATAACAAC+CGG | - | chr3.1:45422605-45422624 | MS.gene04134:CDS | 40.0% | |
| TTATCTGCCTGAGTTGTACT+GGG | + | chr3.1:45421303-45421322 | None:intergenic | 40.0% | |
| TTGACAAGACACATTTCTGC+TGG | - | chr3.1:45421156-45421175 | MS.gene04134:CDS | 40.0% | |
| ! | AAACCAGGTTCTAGTCACTT+AGG | + | chr3.1:45420490-45420509 | None:intergenic | 40.0% |
| ! | AGAGTTGTTTGCTGATGTGT+TGG | + | chr3.1:45420952-45420971 | None:intergenic | 40.0% |
| ! | AGGGCGAATTGACTTATCAA+TGG | - | chr3.1:45421944-45421963 | MS.gene04134:CDS | 40.0% |
| ! | ATCCTCTGATTTGTCTCAAG+AGG | - | chr3.1:45419902-45419921 | MS.gene04134:CDS | 40.0% |
| ! | ATTATTTTCATGGCTGCTGG+CGG | + | chr3.1:45421479-45421498 | None:intergenic | 40.0% |
| ! | GAGTTGTTTGCTGATGTGTT+GGG | + | chr3.1:45420951-45420970 | None:intergenic | 40.0% |
| ! | TTGCCCGATTGTTGATAAGT+TGG | - | chr3.1:45422294-45422313 | MS.gene04134:CDS | 40.0% |
| ! | TTGCTATTGCTGTGGTATCT+TGG | - | chr3.1:45420444-45420463 | MS.gene04134:intron | 40.0% |
| !! | ATAACAGAAGAGTGTTGCCT+CGG | - | chr3.1:45422194-45422213 | MS.gene04134:CDS | 40.0% |
| !! | CGAATTCTCTTTTTCACAGC+AGG | + | chr3.1:45421279-45421298 | None:intergenic | 40.0% |
| !! | GGTAAAGCAAAAGAAGCATC+TGG | - | chr3.1:45421252-45421271 | MS.gene04134:CDS | 40.0% |
| !!! | GGTGTATTTTGCTATTGCTG+TGG | - | chr3.1:45420436-45420455 | MS.gene04134:intron | 40.0% |
| AAAGGTAAGTGGCGTCTTAC+TGG | - | chr3.1:45421776-45421795 | MS.gene04134:intron | 45.0% | |
| AACAATCGGGCAAACTCCAT+AGG | + | chr3.1:45422287-45422306 | None:intergenic | 45.0% | |
| AATTCGACCCAGTACAACTC+AGG | - | chr3.1:45421293-45421312 | MS.gene04134:CDS | 45.0% | |
| ACACATTTCTGCTGGACCAT+TGG | - | chr3.1:45421164-45421183 | MS.gene04134:CDS | 45.0% | |
| ACGTTCTCAAATCTGAACCG+AGG | + | chr3.1:45422214-45422233 | None:intergenic | 45.0% | |
| AGAAAGCCATCAAACGTCCA+TGG | + | chr3.1:45420116-45420135 | None:intergenic | 45.0% | |
| AGCCTCTTGAGACAAATCAG+AGG | + | chr3.1:45419907-45419926 | None:intergenic | 45.0% | |
| AGTTGGAATTGTAGGGGGTT+GGG | - | chr3.1:45421500-45421519 | MS.gene04134:CDS | 45.0% | |
| ATAGCGTAGTGATCCGAAGA+AGG | + | chr3.1:45422148-45422167 | None:intergenic | 45.0% | |
| CCGGTTTATAAACACGGACA+AGG | + | chr3.1:45421556-45421575 | None:intergenic | 45.0% | |
| CCTGATCAATGGTAACACCT+TGG | + | chr3.1:45420025-45420044 | None:intergenic | 45.0% | |
| CTCATGCTAACAGGGAATAC+AGG | - | chr3.1:45420970-45420989 | MS.gene04134:CDS | 45.0% | |
| CTGAGTAATCGTTCTGTTGG+CGG | - | chr3.1:45420547-45420566 | MS.gene04134:intron | 45.0% | |
| CTGGCTGATGTACATACAGA+AGG | - | chr3.1:45421995-45422014 | MS.gene04134:CDS | 45.0% | |
| CTTTCAAAACTTTGGCGTCC+TGG | - | chr3.1:45419999-45420018 | MS.gene04134:CDS | 45.0% | |
| GATGGGAGCTTGAGATTGAT+TGG | - | chr3.1:45421012-45421031 | MS.gene04134:CDS | 45.0% | |
| GATGTACATGCGTATTCGTG+TGG | - | chr3.1:45420321-45420340 | MS.gene04134:intron | 45.0% | |
| GCACAACCTGTAAATCACGT+GGG | + | chr3.1:45421203-45421222 | None:intergenic | 45.0% | |
| GGCGTTGCTGATGTTAATGA+AGG | - | chr3.1:45420661-45420680 | MS.gene04134:intron | 45.0% | |
| GGTTCAGATTTGAGAACGTC+TGG | - | chr3.1:45422215-45422234 | MS.gene04134:CDS | 45.0% | |
| GTGAATAAATGGTTGCGTGG+TGG | - | chr3.1:45420580-45420599 | MS.gene04134:intron | 45.0% | |
| GTGACGAAACTACTAAAGCC+GGG | + | chr3.1:45422250-45422269 | None:intergenic | 45.0% | |
| GTGCGCAAGTAAGAAGAAAC+CGG | - | chr3.1:45421131-45421150 | MS.gene04134:CDS | 45.0% | |
| GTGCTGGACTATGTGAATGA+AGG | - | chr3.1:45421366-45421385 | MS.gene04134:intron | 45.0% | |
| GTGCTTAGGAAGGTCAACAT+TGG | - | chr3.1:45420140-45420159 | MS.gene04134:CDS | 45.0% | |
| GTTCTCTTCCACCTGATCAA+TGG | + | chr3.1:45420036-45420055 | None:intergenic | 45.0% | |
| TACCTCGTCCTCCATCATTA+TGG | + | chr3.1:45420627-45420646 | None:intergenic | 45.0% | |
| TAGTTGGAATTGTAGGGGGT+TGG | - | chr3.1:45421499-45421518 | MS.gene04134:CDS | 45.0% | |
| TCAGGCAGATAATGCAAGCA+TGG | - | chr3.1:45421311-45421330 | MS.gene04134:CDS | 45.0% | |
| TGAAGGTCCTTTCAATGTGG+TGG | - | chr3.1:45420678-45420697 | MS.gene04134:intron | 45.0% | |
| TGAGTAATCGTTCTGTTGGC+GGG | - | chr3.1:45420548-45420567 | MS.gene04134:intron | 45.0% | |
| TGATAGAATGAGGAGTCAGG+TGG | - | chr3.1:45422402-45422421 | MS.gene04134:CDS | 45.0% | |
| TGCACAACCTGTAAATCACG+TGG | + | chr3.1:45421204-45421223 | None:intergenic | 45.0% | |
| TGTCCTAAGTGACTAGAACC+TGG | - | chr3.1:45420484-45420503 | MS.gene04134:intron | 45.0% | |
| ! | AGGTGTTACCATTGATCAGG+TGG | - | chr3.1:45420025-45420044 | MS.gene04134:CDS | 45.0% |
| ! | CCAAGGTGTTACCATTGATC+AGG | - | chr3.1:45420022-45420041 | MS.gene04134:CDS | 45.0% |
| ! | CCTTTCAATGTGGTGGTGAT+GGG | - | chr3.1:45420685-45420704 | MS.gene04134:intron | 45.0% |
| ! | TCCTTTCAATGTGGTGGTGA+TGG | - | chr3.1:45420684-45420703 | MS.gene04134:intron | 45.0% |
| ! | TGCTGGACCATTGGTGATAA+GGG | - | chr3.1:45421173-45421192 | MS.gene04134:CDS | 45.0% |
| ! | TGTTGTTTGTGATTCTGGGC+TGG | - | chr3.1:45421976-45421995 | MS.gene04134:CDS | 45.0% |
| ! | TTATTTTCATGGCTGCTGGC+GGG | + | chr3.1:45421478-45421497 | None:intergenic | 45.0% |
| !! | CGAGGTACTGGTAGTAGTAA+TGG | - | chr3.1:45420640-45420659 | MS.gene04134:intron | 45.0% |
| !! | GTAGGGGCTTTACTTTTCAC+AGG | - | chr3.1:45420755-45420774 | MS.gene04134:intron | 45.0% |
| !! | GTTATTGGTTCTAATGGGGG+AGG | - | chr3.1:45420790-45420809 | MS.gene04134:intron | 45.0% |
| !!! | CCCCTTTGGTTTTATGCATG+AGG | - | chr3.1:45420222-45420241 | MS.gene04134:intron | 45.0% |
| !!! | CTAGAACCTGGTTTTGTGGA+TGG | - | chr3.1:45420496-45420515 | MS.gene04134:intron | 45.0% |
| !!! | GTGACTAGAACCTGGTTTTG+TGG | - | chr3.1:45420492-45420511 | MS.gene04134:intron | 45.0% |
| !!! | GTGGTGGTCTTGTTTTGTAC+TGG | - | chr3.1:45421681-45421700 | MS.gene04134:CDS | 45.0% |
| !!! | TGGTTTTATGCATGAGGACC+TGG | - | chr3.1:45420228-45420247 | MS.gene04134:intron | 45.0% |
| AAGACGTTCCTCAACAGCTC+TGG | + | chr3.1:45422056-45422075 | None:intergenic | 50.0% | |
| AATACGCATGTACATCCGCC+AGG | + | chr3.1:45420317-45420336 | None:intergenic | 50.0% | |
| AGTAATCGTTCTGTTGGCGG+GGG | - | chr3.1:45420550-45420569 | MS.gene04134:intron | 50.0% | |
| ATACGCATGTACATCCGCCA+GGG | + | chr3.1:45420316-45420335 | None:intergenic | 50.0% | |
| ATGCTGCGGCTTCTTCAAGA+CGG | - | chr3.1:45422560-45422579 | MS.gene04134:CDS | 50.0% | |
| ATGGCTTTCTGCTGGTGCTT+AGG | - | chr3.1:45420126-45420145 | MS.gene04134:CDS | 50.0% | |
| ATGGTTGCGTGGTGGTAGAA+TGG | - | chr3.1:45420588-45420607 | MS.gene04134:intron | 50.0% | |
| CAAATCAGAGGATCCAGCTG+AGG | + | chr3.1:45419895-45419914 | None:intergenic | 50.0% | |
| CAGCGGCTCATTGACATTCA+GGG | + | chr3.1:45420347-45420366 | None:intergenic | 50.0% | |
| CATGGTGGCTGTACTTGAAC+AGG | - | chr3.1:45421329-45421348 | MS.gene04134:CDS | 50.0% | |
| CCCATCACCACCACATTGAA+AGG | + | chr3.1:45420688-45420707 | None:intergenic | 50.0% | |
| CTGCTGAATGAAGGAGATGC+TGG | - | chr3.1:45421081-45421100 | MS.gene04134:CDS | 50.0% | |
| CTGGACAAACTTCTGCACCA+GGG | - | chr3.1:45421100-45421119 | MS.gene04134:CDS | 50.0% | |
| CTTTCTGCTGGTGCTTAGGA+AGG | - | chr3.1:45420130-45420149 | MS.gene04134:CDS | 50.0% | |
| GAATCCTACAAGAAGGGCCA+TGG | - | chr3.1:45420096-45420115 | MS.gene04134:CDS | 50.0% | |
| GAATCTGCCAGCACCTTCTT+CGG | - | chr3.1:45422132-45422151 | MS.gene04134:intron | 50.0% | |
| GAGTAATCGTTCTGTTGGCG+GGG | - | chr3.1:45420549-45420568 | MS.gene04134:intron | 50.0% | |
| GATCCAGCTGAGGATGCATT+TGG | + | chr3.1:45419885-45419904 | None:intergenic | 50.0% | |
| GCGCTCTTGCAACTGAAAAC+TGG | - | chr3.1:45422080-45422099 | MS.gene04134:intron | 50.0% | |
| GGAAGCAAGTGATATGGTGC+TGG | - | chr3.1:45421350-45421369 | MS.gene04134:intron | 50.0% | |
| GGCAGATAATGCAAGCATGG+TGG | - | chr3.1:45421314-45421333 | MS.gene04134:CDS | 50.0% | |
| GTCAAAGAGCGAAGACTCAC+TGG | - | chr3.1:45422503-45422522 | MS.gene04134:CDS | 50.0% | |
| GTGCTTCTGATCTCACAGAC+TGG | - | chr3.1:45422323-45422342 | MS.gene04134:CDS | 50.0% | |
| GTTGGGATTGCTCAGCCTTA+TGG | - | chr3.1:45419699-45419718 | MS.gene04134:intron | 50.0% | |
| TCAATGGTAACACCTTGGCC+AGG | + | chr3.1:45420020-45420039 | None:intergenic | 50.0% | |
| TCACCAAATGCATCCTCAGC+TGG | - | chr3.1:45419879-45419898 | MS.gene04134:CDS | 50.0% | |
| TCAGCGGCTCATTGACATTC+AGG | + | chr3.1:45420348-45420367 | None:intergenic | 50.0% | |
| TGAGCCGCTGAAGACATGTA+TGG | - | chr3.1:45420357-45420376 | MS.gene04134:intron | 50.0% | |
| TGCACACCATCCACAAAACC+AGG | + | chr3.1:45420505-45420524 | None:intergenic | 50.0% | |
| TGCATGAATTGGAACCGCAC+CGG | + | chr3.1:45419972-45419991 | None:intergenic | 50.0% | |
| TGCTGACACAGTCCTAGATG+AGG | - | chr3.1:45420172-45420191 | MS.gene04134:CDS | 50.0% | |
| TGCTTGAGCTGTGCGTTGTT+GGG | - | chr3.1:45419928-45419947 | MS.gene04134:CDS | 50.0% | |
| TGTGGATGGTGTGCAACTGT+GGG | - | chr3.1:45420510-45420529 | MS.gene04134:intron | 50.0% | |
| TTGCTTGAGCTGTGCGTTGT+TGG | - | chr3.1:45419927-45419946 | MS.gene04134:CDS | 50.0% | |
| TTGTGGATGGTGTGCAACTG+TGG | - | chr3.1:45420509-45420528 | MS.gene04134:intron | 50.0% | |
| ! | AACGTCTGGTTAGCTGATCC+CGG | - | chr3.1:45422229-45422248 | MS.gene04134:CDS | 50.0% |
| ! | AAGACTCACTGGTTACGGGA+TGG | - | chr3.1:45422514-45422533 | MS.gene04134:CDS | 50.0% |
| ! | AATGATGGAGGACGAGGTAC+TGG | - | chr3.1:45420628-45420647 | MS.gene04134:intron | 50.0% |
| ! | AGCGAAGACTCACTGGTTAC+GGG | - | chr3.1:45422510-45422529 | MS.gene04134:CDS | 50.0% |
| ! | CTGCTGGACCATTGGTGATA+AGG | - | chr3.1:45421172-45421191 | MS.gene04134:CDS | 50.0% |
| ! | GAAGCTGTTGACTGACAAGC+CGG | - | chr3.1:45419950-45419969 | MS.gene04134:CDS | 50.0% |
| ! | GACGTTTGATGGCTTTCTGC+TGG | - | chr3.1:45420118-45420137 | MS.gene04134:CDS | 50.0% |
| ! | GAGCGAAGACTCACTGGTTA+CGG | - | chr3.1:45422509-45422528 | MS.gene04134:CDS | 50.0% |
| ! | GGACCATTGGTGATAAGGGA+TGG | - | chr3.1:45421177-45421196 | MS.gene04134:CDS | 50.0% |
| ! | TAGTGATCCGAAGAAGGTGC+TGG | + | chr3.1:45422142-45422161 | None:intergenic | 50.0% |
| ! | TATTTTCATGGCTGCTGGCG+GGG | + | chr3.1:45421477-45421496 | None:intergenic | 50.0% |
| AAACTTTGGCGTCCTGGCCA+AGG | - | chr3.1:45420005-45420024 | MS.gene04134:CDS | 55.0% | |
| ACAAACTTCTGCACCAGGGC+GGG | - | chr3.1:45421104-45421123 | MS.gene04134:CDS | 55.0% | |
| ACGTCCATGGCCCTTCTTGT+AGG | + | chr3.1:45420103-45420122 | None:intergenic | 55.0% | |
| ATAGCAGAAGACGGGAGGCA+TGG | - | chr3.1:45421819-45421838 | MS.gene04134:intron | 55.0% | |
| ATGGCTGCTGCTAATGCTGG+AGG | - | chr3.1:45420892-45420911 | MS.gene04134:CDS | 55.0% | |
| ATGGGGGAGGTGAAGGTTAG+TGG | - | chr3.1:45420803-45420822 | MS.gene04134:intron | 55.0% | |
| CAGCAGAGCCCCATCAGTTA+TGG | + | chr3.1:45421067-45421086 | None:intergenic | 55.0% | |
| GAAGGGCCATGGACGTTTGA+TGG | - | chr3.1:45420107-45420126 | MS.gene04134:CDS | 55.0% | |
| GACAAACTTCTGCACCAGGG+CGG | - | chr3.1:45421103-45421122 | MS.gene04134:CDS | 55.0% | |
| GACATCCAACCAGATACGCC+AGG | + | chr3.1:45420249-45420268 | None:intergenic | 55.0% | |
| GATGGGGCTCTGCTGAATGA+AGG | - | chr3.1:45421072-45421091 | MS.gene04134:CDS | 55.0% | |
| GCTGGACAAACTTCTGCACC+AGG | - | chr3.1:45421099-45421118 | MS.gene04134:CDS | 55.0% | |
| GGATGGCCCACGTGATTTAC+AGG | - | chr3.1:45421194-45421213 | MS.gene04134:CDS | 55.0% | |
| GGGCCATCCCTTATCACCAA+TGG | + | chr3.1:45421183-45421202 | None:intergenic | 55.0% | |
| GGTATGGCTGCTGCTAATGC+TGG | - | chr3.1:45420889-45420908 | MS.gene04134:CDS | 55.0% | |
| GGTGCGGTTCCAATTCATGC+AGG | - | chr3.1:45419971-45419990 | MS.gene04134:CDS | 55.0% | |
| GTCTTGAAGAAGCCGCAGCA+TGG | + | chr3.1:45422561-45422580 | None:intergenic | 55.0% | |
| GTGGATGGTGTGCAACTGTG+GGG | - | chr3.1:45420511-45420530 | MS.gene04134:intron | 55.0% | |
| TGGGGGAGGTGAAGGTTAGT+GGG | - | chr3.1:45420804-45420823 | MS.gene04134:intron | 55.0% | |
| TTGCGTGGTGGTAGAATGGC+TGG | - | chr3.1:45420592-45420611 | MS.gene04134:intron | 55.0% | |
| ! | ACGTTCCTCAACAGCTCTGG+TGG | + | chr3.1:45422053-45422072 | None:intergenic | 55.0% |
| ! | GGCCATAATGATGGAGGACG+AGG | - | chr3.1:45420622-45420641 | MS.gene04134:intron | 55.0% |
| ! | GGTTCTAATGGGGGAGGTGA+AGG | - | chr3.1:45420796-45420815 | MS.gene04134:intron | 55.0% |
| ! | TGTTGACTGACAAGCCGGTG+CGG | - | chr3.1:45419955-45419974 | MS.gene04134:CDS | 55.0% |
| AACAGGGCATGCTCGCTGGA+AGG | + | chr3.1:45420712-45420731 | None:intergenic | 60.0% | |
| ACAGGGCATGCTCGCTGGAA+GGG | + | chr3.1:45420711-45420730 | None:intergenic | 60.0% | |
| CGTGGCGGCCATAATGATGG+AGG | - | chr3.1:45420616-45420635 | MS.gene04134:intron | 60.0% | |
| GAGGACCTGGCGTATCTGGT+TGG | - | chr3.1:45420241-45420260 | MS.gene04134:intron | 60.0% | |
| GCATGAGGACCTGGCGTATC+TGG | - | chr3.1:45420237-45420256 | MS.gene04134:intron | 60.0% | |
| GGTCGTGGCGGCCATAATGA+TGG | - | chr3.1:45420613-45420632 | MS.gene04134:intron | 60.0% | |
| TCCAAACAGGGCATGCTCGC+TGG | + | chr3.1:45420716-45420735 | None:intergenic | 60.0% | |
| TCCAGCGAGCATGCCCTGTT+TGG | - | chr3.1:45420712-45420731 | MS.gene04134:intron | 60.0% | |
| TGGCACCACCAGAGCTGTTG+AGG | - | chr3.1:45422045-45422064 | MS.gene04134:intron | 60.0% | |
| ! | GGTAGAATGGCTGGTCGTGG+CGG | - | chr3.1:45420601-45420620 | MS.gene04134:intron | 60.0% |
| ! | GGTGGTAGAATGGCTGGTCG+TGG | - | chr3.1:45420598-45420617 | MS.gene04134:intron | 60.0% |
| AACTTCTGCACCAGGGCGGG+TGG | - | chr3.1:45421107-45421126 | MS.gene04134:CDS | 65.0% | |
| CTTGCGCACACCACCCGCCC+TGG | + | chr3.1:45421120-45421139 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 45419537 | 45422698 | 45419537 | ID=MS.gene04134 |
| chr3.1 | mRNA | 45419537 | 45422698 | 45419537 | ID=MS.gene04134.t1;Parent=MS.gene04134 |
| chr3.1 | exon | 45422192 | 45422698 | 45422192 | ID=MS.gene04134.t1.exon1;Parent=MS.gene04134.t1 |
| chr3.1 | CDS | 45422192 | 45422698 | 45422192 | ID=cds.MS.gene04134.t1;Parent=MS.gene04134.t1 |
| chr3.1 | exon | 45421838 | 45422024 | 45421838 | ID=MS.gene04134.t1.exon2;Parent=MS.gene04134.t1 |
| chr3.1 | CDS | 45421838 | 45422024 | 45421838 | ID=cds.MS.gene04134.t1;Parent=MS.gene04134.t1 |
| chr3.1 | exon | 45421459 | 45421735 | 45421459 | ID=MS.gene04134.t1.exon3;Parent=MS.gene04134.t1 |
| chr3.1 | CDS | 45421459 | 45421735 | 45421459 | ID=cds.MS.gene04134.t1;Parent=MS.gene04134.t1 |
| chr3.1 | exon | 45420848 | 45421356 | 45420848 | ID=MS.gene04134.t1.exon4;Parent=MS.gene04134.t1 |
| chr3.1 | CDS | 45420848 | 45421356 | 45420848 | ID=cds.MS.gene04134.t1;Parent=MS.gene04134.t1 |
| chr3.1 | exon | 45419862 | 45420221 | 45419862 | ID=MS.gene04134.t1.exon5;Parent=MS.gene04134.t1 |
| chr3.1 | CDS | 45419862 | 45420221 | 45419862 | ID=cds.MS.gene04134.t1;Parent=MS.gene04134.t1 |
| chr3.1 | exon | 45419537 | 45419547 | 45419537 | ID=MS.gene04134.t1.exon6;Parent=MS.gene04134.t1 |
| chr3.1 | CDS | 45419537 | 45419547 | 45419537 | ID=cds.MS.gene04134.t1;Parent=MS.gene04134.t1 |
| Gene Sequence |
| Protein sequence |
