AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene64178

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene64178.t1 MTR_6g033215 78.866 194 41 0 2 195 102 295 2.53e-108 333
MS.gene64178.t1 MTR_8g470880 84.459 148 23 0 625 772 377 524 8.02e-84 277
MS.gene64178.t1 MTR_1g100687 57.297 185 77 1 625 807 18 202 4.34e-71 233
MS.gene64178.t1 MTR_6g053790 48.736 277 80 5 131 405 35 251 3.28e-69 231
MS.gene64178.t1 MTR_0042s0130 54.098 183 84 0 625 807 121 303 2.35e-62 213
MS.gene64178.t1 MTR_6g009010 55.491 173 61 1 625 797 105 261 1.86e-61 208
MS.gene64178.t1 MTR_0114s0080 86.239 109 15 0 641 749 21 129 2.40e-60 201
MS.gene64178.t1 MTR_4g020630 53.552 183 77 1 625 807 26 200 5.00e-59 209
MS.gene64178.t1 MTR_2g018005 64.234 137 45 1 619 751 94 230 3.08e-56 193
MS.gene64178.t1 MTR_6g034715 61.194 134 52 0 625 758 10 143 8.41e-56 189
MS.gene64178.t1 MTR_6g034215 49.223 193 76 2 619 807 94 268 8.45e-55 192
MS.gene64178.t1 MTR_2g055450 51.087 184 75 1 625 808 138 306 3.06e-53 191
MS.gene64178.t1 MTR_1g051330 43.000 200 109 2 612 807 220 418 4.60e-51 191
MS.gene64178.t1 MTR_3g044860 54.194 155 67 2 654 808 3 153 4.27e-49 176
MS.gene64178.t1 MTR_8g463110 51.701 147 71 0 662 808 119 265 4.14e-45 173
MS.gene64178.t1 MTR_2g078880 56.489 131 42 1 625 755 81 196 1.53e-44 159
MS.gene64178.t1 MTR_6g046587 48.667 150 76 1 625 774 132 280 6.56e-42 155
MS.gene64178.t1 MTR_4g044433 86.301 73 10 0 625 697 75 147 1.64e-39 143
MS.gene64178.t1 MTR_0093s0080 50.794 126 40 2 625 750 21 124 2.03e-36 134
MS.gene64178.t1 MTR_2g064335 38.462 182 87 3 626 807 18 174 1.15e-28 117
MS.gene64178.t1 MTR_8g446890 41.333 150 59 4 641 790 7 127 4.12e-27 108
MS.gene64178.t1 MTR_0010s0370 33.117 154 103 0 19 172 24 177 9.98e-27 108
MS.gene64178.t1 MTR_0010s0350 33.117 154 103 0 19 172 24 177 9.98e-27 108
MS.gene64178.t1 MTR_4g033730 53.261 92 43 0 625 716 47 138 2.96e-26 105
MS.gene64178.t1 MTR_8g019640 36.471 170 68 3 641 809 3 133 8.57e-26 111
MS.gene64178.t1 MTR_8g468010 60.317 63 25 0 110 172 1 63 1.25e-24 100
MS.gene64178.t1 MTR_6g053230 28.649 185 93 2 1 182 22 170 4.31e-24 107
MS.gene64178.t1 MTR_1g062290 62.687 67 25 0 729 795 1 67 4.09e-22 94.7
MS.gene64178.t1 MTR_4g075740 41.429 140 62 4 2 140 22 142 6.07e-22 93.6
MS.gene64178.t1 MTR_0112s0060 57.534 73 31 0 678 750 36 108 3.06e-21 90.5
MS.gene64178.t1 MTR_3g024240 36.000 125 78 1 72 194 50 174 1.26e-20 90.9
MS.gene64178.t1 MTR_1g032270 51.282 78 37 1 93 169 1 78 1.62e-20 89.4
MS.gene64178.t1 MTR_8g442690 29.630 189 123 3 625 807 51 235 1.25e-19 93.6
MS.gene64178.t1 MTR_0123s0050 66.000 50 17 0 696 745 1 50 5.35e-19 82.4
MS.gene64178.t1 MTR_2g084625 48.718 78 40 0 631 708 24 101 3.03e-18 87.4
MS.gene64178.t1 MTR_4g020545 27.053 207 92 6 57 256 80 234 1.39e-17 84.7
MS.gene64178.t1 MTR_3g053920 31.452 124 78 1 2 125 16 132 6.15e-17 82.4
MS.gene64178.t1 MTR_2g061500 30.303 132 83 2 2 133 16 138 1.57e-14 71.6
MS.gene64178.t1 MTR_1g054775 30.220 182 123 3 627 807 658 836 1.46e-13 75.5
MS.gene64178.t1 MTR_3g041640 64.286 42 15 0 110 151 1 42 3.29e-13 68.2
MS.gene64178.t1 MTR_4g122570 35.849 106 67 1 680 785 328 432 2.11e-11 67.8
MS.gene64178.t1 MTR_4g103530 31.461 89 61 0 52 140 5 93 2.18e-11 64.3
MS.gene64178.t1 MTR_7g080340 46.429 56 30 0 628 683 4 59 3.88e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene64178.t1 AT2G01050 24.590 183 132 3 28 210 80 256 2.76e-14 77.0
MS.gene64178.t1 AT3G31430 25.543 184 133 1 27 210 132 311 6.57e-13 71.2

Find 246 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTTCTTCTAGCAGTTTC+TGG 0.158466 5.2:+18890183 None:intergenic
AGACCAGATTGGGACCTATT+TGG 0.177001 5.2:-18892269 MS.gene64178:CDS
CATGCTCAGCATTGAGATTC+AGG 0.187783 5.2:+18892394 None:intergenic
CTTTCCAGTCACAAATTATA+TGG 0.199804 5.2:-18891568 MS.gene64178:CDS
GAGCTTTAGTATCCAATTCT+TGG 0.227006 5.2:-18889915 MS.gene64178:CDS
AATACAACCTGGCTCATTTA+TGG 0.229818 5.2:-18890717 MS.gene64178:CDS
TGTTACCCTCCATGGGAATA+AGG 0.239875 5.2:+18892226 None:intergenic
GACTTAAAGACAGCATTTAT+TGG 0.246435 5.2:+18890980 None:intergenic
TTTGTGGGCTCACTTGCTTT+TGG 0.247121 5.2:+18891242 None:intergenic
CTCCGATCTCGACTTTCTTC+AGG 0.248394 5.2:+18892118 None:intergenic
TATCCACCTGTTTGCCTCCT+TGG 0.248825 5.2:+18891687 None:intergenic
CGATATTTCGGTTCCCAAAT+AGG 0.292205 5.2:+18892255 None:intergenic
CGGAGCAAATACTTTGGTTC+TGG 0.295554 5.2:+18891387 None:intergenic
CAGATTCACCAATTGCCTTT+TGG 0.300296 5.2:-18892051 MS.gene64178:CDS
GGTTCTGGCCTCCTCTTGAT+TGG 0.303604 5.2:+18891408 None:intergenic
AAATACTTTGGTTCTGGTTC+TGG 0.306375 5.2:+18891393 None:intergenic
CTGCTGGACCTGTGCCTTGT+AGG 0.318640 5.2:-18892333 MS.gene64178:CDS
TGATCTGACTTTGTTAAATT+CGG 0.323714 5.2:+18891367 None:intergenic
TAGGCGGCTTGGCTCGGCTT+GGG 0.327720 5.2:+18890810 None:intergenic
CTTTCAAATTTGAGAATGTC+TGG 0.328709 5.2:-18889780 MS.gene64178:CDS
GGCGGAGGTTTATGCGAATC+AGG 0.331581 5.2:-18891942 MS.gene64178:CDS
GGGGAGGTGCAGAAGCATTA+TGG 0.342734 5.2:-18891285 MS.gene64178:CDS
AAATAACTGCATCCAAGAAT+TGG 0.343002 5.2:+18889903 None:intergenic
TGGATGTTCACAGGATTCTA+TGG 0.353389 5.2:-18890210 MS.gene64178:intron
TTTCAGAATTTGCTGTCAAA+TGG 0.355193 5.2:-18890920 MS.gene64178:CDS
GACCAGATTGGGACCTATTT+GGG 0.364269 5.2:-18892268 MS.gene64178:CDS
TGCGATCAAGGATCCTCTTC+AGG 0.366802 5.2:+18892172 None:intergenic
GAAGGGGCCCACCAGGGGAC+AGG 0.373664 5.2:-18891147 MS.gene64178:CDS
TCTCCCACTTTCAAAGCTGC+TGG 0.374798 5.2:-18890875 MS.gene64178:CDS
AAGTTTACCTTGGTGTTTGA+TGG 0.379005 5.2:-18890124 MS.gene64178:CDS
ATAAGGGTCATGCGATATTT+CGG 0.389908 5.2:+18892243 None:intergenic
GAGGCAAACAGGTGGATAAT+AGG 0.391422 5.2:-18891682 MS.gene64178:CDS
TCGGTAGTAGCAAGAAGAAA+TGG 0.391828 5.2:-18891750 MS.gene64178:CDS
ACGGGACCGGTCTTGTTAGA+TGG 0.397211 5.2:-18891471 MS.gene64178:CDS
GCTGTTGTGTCTCAAGCTCT+TGG 0.411219 5.2:-18890773 MS.gene64178:CDS
CTCTCCTAGGCGGCTTGGCT+CGG 0.412370 5.2:+18890804 None:intergenic
TCAAGAGTGGCCAGATGAAT+AGG 0.414947 5.2:+18892291 None:intergenic
CGCGTGGAACAATGCTTAGA+AGG 0.415700 5.2:-18891189 MS.gene64178:CDS
TGCTTGCCGCGCCTGTCCCC+TGG 0.416059 5.2:+18891136 None:intergenic
ATTATGGAAGCTAATGGAAT+TGG 0.420002 5.2:-18891269 MS.gene64178:CDS
CTAGGCGGCTTGGCTCGGCT+TGG 0.420129 5.2:+18890809 None:intergenic
CGGTAGTAGCAAGAAGAAAT+GGG 0.426030 5.2:-18891749 MS.gene64178:CDS
GGGGACCACCTGCTGGTTTG+AGG 0.428654 5.2:+18891090 None:intergenic
TAAATGAGCCAGGTTGTATT+GGG 0.428762 5.2:+18890720 None:intergenic
CTGTTGTGTCTCAAGCTCTT+GGG 0.431987 5.2:-18890772 MS.gene64178:CDS
GTTACCCTCCATGGGAATAA+GGG 0.433071 5.2:+18892227 None:intergenic
ATAAATGAGCCAGGTTGTAT+TGG 0.433379 5.2:+18890719 None:intergenic
GAGCAATGGGGACCACCTGC+TGG 0.440613 5.2:+18891083 None:intergenic
GATCACCGGAATTGTTATTC+CGG 0.441463 5.2:+18891656 None:intergenic
CGTCAAGCCATTCAAGATGC+TGG 0.444182 5.2:-18890024 MS.gene64178:CDS
ATTGGGCTGCGTCCTACAGC+TGG 0.445419 5.2:+18890737 None:intergenic
GCCACTCTTGAGACCAGATT+GGG 0.446698 5.2:-18892279 MS.gene64178:CDS
CTAGCGCTCGCGGCTTCAGT+AGG 0.448868 5.2:-18890694 MS.gene64178:CDS
TTCAGAATTTGCTGTCAAAT+GGG 0.450662 5.2:-18890919 MS.gene64178:CDS
GAGAGGGTTGGAGCTCTTGT+AGG 0.450828 5.2:-18892018 MS.gene64178:CDS
TTTCCAGTCACAAATTATAT+GGG 0.452420 5.2:-18891567 MS.gene64178:CDS
CTCCTCTTGATTGGTCCCTT+CGG 0.454776 5.2:+18891417 None:intergenic
GTGGGTCCCCTGATGACAAT+GGG 0.455219 5.2:-18890667 MS.gene64178:CDS
CTGGTCATTGAGAGGGAAGA+AGG 0.455817 5.2:-18891883 MS.gene64178:CDS
TCTTACTCAAGCTGAGCTGC+TGG 0.457970 5.2:-18892349 MS.gene64178:CDS
GATAGCTGGCTGGGTAGTGC+AGG 0.459195 5.2:-18889724 MS.gene64178:CDS
CCATGAAGCCAAAAGGCAAT+TGG 0.459273 5.2:+18892043 None:intergenic
GCGGCACCAAGGAGGCAAAC+AGG 0.462059 5.2:-18891693 MS.gene64178:CDS
GGTGGGTCCCCTGATGACAA+TGG 0.463507 5.2:-18890668 MS.gene64178:CDS
ATGACCAGCTCTTGTTGTAA+AGG 0.463721 5.2:+18891898 None:intergenic
TGCTATCAAATACGAGAAGT+TGG 0.463970 5.2:-18891845 MS.gene64178:CDS
GGCGGCCGGAATAACAATTC+CGG 0.464802 5.2:-18891661 MS.gene64178:CDS
TTTATCTCTCCTAGGCGGCT+TGG 0.465127 5.2:+18890799 None:intergenic
AATGTCTGGAGAGTAGAGGA+AGG 0.465194 5.2:-18889766 MS.gene64178:CDS
GCGGCTTGGCTCGGCTTGGG+AGG 0.465642 5.2:+18890813 None:intergenic
TAAGAACTTGTTACCCTCCA+TGG 0.467025 5.2:+18892218 None:intergenic
AGCTGACCCACTTGCAGCAC+CGG 0.467204 5.2:+18890850 None:intergenic
ACGACCAAGGGCTGCGATCA+AGG 0.467876 5.2:+18892160 None:intergenic
GGAGGGCTACAAGACCTAAC+TGG 0.469948 5.2:-18890062 MS.gene64178:CDS
ACTTTCAAAGCTGCTGGGAC+CGG 0.472804 5.2:-18890869 MS.gene64178:CDS
CCTTCGGTAGGAATCTCCAT+AGG 0.472814 5.2:+18891433 None:intergenic
AGTTTACCTTGGTGTTTGAT+GGG 0.473140 5.2:-18890123 MS.gene64178:CDS
TTCCCAAATAGGTCCCAATC+TGG 0.478042 5.2:+18892266 None:intergenic
TTTACTTGGTTTAAAAGCTT+AGG 0.479268 5.2:-18889970 MS.gene64178:CDS
CTCCCACTTTCAAAGCTGCT+GGG 0.480750 5.2:-18890874 MS.gene64178:CDS
TGTGATGATTGCTGAGCAAT+GGG 0.482295 5.2:+18891070 None:intergenic
GAGGGTGATCACGGTAAGGA+AGG 0.485746 5.2:-18890611 MS.gene64178:CDS
CTTATTGATGTTCATATGGA+AGG 0.486879 5.2:-18890000 MS.gene64178:CDS
GGTAAACAAGCCTATTCATC+TGG 0.488377 5.2:-18892301 MS.gene64178:CDS
ACTCTGTTGTTGCGAGTCAC+AGG 0.489036 5.2:+18889811 None:intergenic
TTGTTCTCCGCCTTGAGGTA+AGG 0.489197 5.2:+18891724 None:intergenic
CCCCTCGTCCCTCCGATCAC+CGG 0.490711 5.2:+18891642 None:intergenic
GGTAAGGAAGGGCAGCAAGC+TGG 0.490861 5.2:-18890599 MS.gene64178:CDS
CTCTTGTAGGCTCGCATGTG+GGG 0.490883 5.2:-18892005 MS.gene64178:CDS
GCTGGGACCGGTGCTGCAAG+TGG 0.492100 5.2:-18890857 MS.gene64178:CDS
GCTCGCGGCTTCAGTAGGGC+AGG 0.492402 5.2:-18890689 MS.gene64178:CDS
GATCCTCTTCAGGTCCGCCT+TGG 0.495756 5.2:+18892182 None:intergenic
CAAGCCGAGCCAAGCCGCCT+AGG 0.495867 5.2:-18890808 MS.gene64178:CDS
CTCTCGTCCATGAAGCCAAA+AGG 0.498329 5.2:+18892036 None:intergenic
TTCCGGTGATCGGAGGGACG+AGG 0.499509 5.2:-18891644 MS.gene64178:CDS
GGCTTCATGGACGAGAGGGT+TGG 0.501888 5.2:-18892030 MS.gene64178:CDS
AGCTCAGCTTGAGTAAGATT+CGG 0.502193 5.2:+18892354 None:intergenic
TTTGACAGAAGGGGCCCACC+AGG 0.502218 5.2:-18891154 MS.gene64178:CDS
AATAAGCCCAGCATCTTGAA+TGG 0.503815 5.2:+18890017 None:intergenic
TAAATTCGGAGCAAATACTT+TGG 0.504603 5.2:+18891381 None:intergenic
GGCCCACCAGGGGACAGGCG+CGG 0.504786 5.2:-18891142 MS.gene64178:CDS
AACCCTCTGATAAGCCAGTT+AGG 0.506359 5.2:+18890048 None:intergenic
GTCAAGCCATTCAAGATGCT+GGG 0.506708 5.2:-18890023 MS.gene64178:CDS
TGGGCTTATTGATGTTCATA+TGG 0.507181 5.2:-18890004 MS.gene64178:CDS
TTGATGTTGTTCGAGATAGC+TGG 0.507654 5.2:-18889738 MS.gene64178:CDS
CTAGACAAATAAGTTTACCT+TGG 0.508059 5.2:-18890134 MS.gene64178:CDS
CGCGGCTTCAGTAGGGCAGG+TGG 0.508621 5.2:-18890686 MS.gene64178:CDS
ATGGAAGCTAATGGAATTGG+AGG 0.508884 5.2:-18891266 MS.gene64178:CDS
TGAAAATTAATGCGGAATCC+AGG 0.509584 5.2:-18891534 MS.gene64178:CDS
TGTCTGGAGAGTAGAGGAAG+GGG 0.509658 5.2:-18889764 MS.gene64178:CDS
GCTATCAAATACGAGAAGTT+GGG 0.510034 5.2:-18891844 MS.gene64178:CDS
TGCAGTGATAAGTTTGAAGA+TGG 0.512060 5.2:-18891775 MS.gene64178:CDS
GGCCACTCTTGAGACCAGAT+TGG 0.512060 5.2:-18892280 MS.gene64178:CDS
GGTCCGCCTTGGAGTAAAGC+TGG 0.512617 5.2:+18892193 None:intergenic
CTGCTGGTTTGAGGAATCAA+AGG 0.513701 5.2:+18891099 None:intergenic
CTTTGATTCCTCAAACCAGC+AGG 0.514611 5.2:-18891098 MS.gene64178:CDS
CTTCACGCTGATGAAAAGAA+AGG 0.516354 5.2:-18890084 MS.gene64178:CDS
GTGGACTGAAGTGGACCCTA+TGG 0.516444 5.2:-18891449 MS.gene64178:CDS
CAGCATCTTGAATGGCTTGA+CGG 0.517828 5.2:+18890025 None:intergenic
GCTCTTGTAGGCTCGCATGT+GGG 0.520296 5.2:-18892006 MS.gene64178:CDS
AACAAGAGCTGGTCATTGAG+AGG 0.523901 5.2:-18891891 MS.gene64178:CDS
ATGTCTGGAGAGTAGAGGAA+GGG 0.525001 5.2:-18889765 MS.gene64178:CDS
GCGCTAGCCATAAATGAGCC+AGG 0.525267 5.2:+18890710 None:intergenic
AGCCCACAAAATTCTACAGC+TGG 0.525349 5.2:-18891229 MS.gene64178:CDS
TTCACGCTGATGAAAAGAAA+GGG 0.525903 5.2:-18890083 MS.gene64178:CDS
CTGAATCTCAATGCTGAGCA+TGG 0.530109 5.2:-18892393 MS.gene64178:CDS
TAGCGCTCGCGGCTTCAGTA+GGG 0.531623 5.2:-18890693 MS.gene64178:CDS
TTACCACAACGCGACCTACA+AGG 0.533455 5.2:+18892319 None:intergenic
CTTAGTCCAGCTTTACTCCA+AGG 0.537023 5.2:-18892199 MS.gene64178:CDS
ACAACTACGGGCCATGGCGG+AGG 0.537762 5.2:-18891957 MS.gene64178:CDS
TGGAATGTCAACGGTCTGAC+GGG 0.537783 5.2:-18891489 MS.gene64178:CDS
CTGCTAGAAGAAGAGACTCA+TGG 0.538974 5.2:-18890176 MS.gene64178:CDS
ACTCCAAGGCGGACCTGAAG+AGG 0.540246 5.2:-18892185 MS.gene64178:CDS
ATGGAATGTCAACGGTCTGA+CGG 0.540311 5.2:-18891490 MS.gene64178:CDS
GAAGATAAAACGGCGGGACC+TGG 0.540532 5.2:-18890551 MS.gene64178:intron
TCCGGTGATCGGAGGGACGA+GGG 0.541732 5.2:-18891643 MS.gene64178:CDS
GGGGACAGGCGCGGCAAGCA+AGG 0.541990 5.2:-18891133 MS.gene64178:CDS
TCATTTATGGCTAGCGCTCG+CGG 0.543317 5.2:-18890704 MS.gene64178:CDS
TCTTGATTGGTCCCTTCGGT+AGG 0.543319 5.2:+18891421 None:intergenic
CAAATTTCTGTATTCCGCGC+TGG 0.544550 5.2:+18891021 None:intergenic
GGATCCTTGATCGCAGCCCT+TGG 0.546820 5.2:-18892164 MS.gene64178:CDS
TTCGTTACATGGAATGTCAA+CGG 0.547154 5.2:-18891498 MS.gene64178:CDS
AGCAGAAGGGATGAACGAAA+AGG 0.547926 5.2:-18891329 MS.gene64178:CDS
TGCTGGTTTGAGGAATCAAA+GGG 0.551773 5.2:+18891100 None:intergenic
AGAAGCATTATGGAAGCTAA+TGG 0.551987 5.2:-18891275 MS.gene64178:CDS
TTTACCTTGGTGTTTGATGG+GGG 0.554993 5.2:-18890121 MS.gene64178:CDS
GTTAACAAAGCATTAGCAGA+AGG 0.555344 5.2:-18891343 MS.gene64178:CDS
AAGACAACAACTACGGGCCA+TGG 0.555966 5.2:-18891963 MS.gene64178:CDS
AGGCACTCCTCGTGCTGTGG+AGG 0.556549 5.2:-18889950 MS.gene64178:CDS
TGAGAATGTCTGGAGAGTAG+AGG 0.557100 5.2:-18889770 MS.gene64178:CDS
TGCCGCGCCTGTCCCCTGGT+GGG 0.558005 5.2:+18891140 None:intergenic
TAACAATTCCGGTGATCGGA+GGG 0.559010 5.2:-18891650 MS.gene64178:CDS
GCGCCCATATAATTTGTGAC+TGG 0.562097 5.2:+18891564 None:intergenic
TGTCAACGGTCTGACGGGAC+CGG 0.563723 5.2:-18891484 MS.gene64178:CDS
TTGCCGCGCCTGTCCCCTGG+TGG 0.564079 5.2:+18891139 None:intergenic
AATCAGGGTGGAAATTGCGT+TGG 0.566243 5.2:-18891926 MS.gene64178:CDS
TCGTACTGATACTGCTGAGG+AGG 0.567165 5.2:-18890630 MS.gene64178:CDS
TTTGGGCCCATTGTCATCAG+GGG 0.567188 5.2:+18890661 None:intergenic
TTGTGATGATTGCTGAGCAA+TGG 0.570758 5.2:+18891069 None:intergenic
TCGCATGACCCTTATTCCCA+TGG 0.573201 5.2:-18892235 MS.gene64178:CDS
GGAATAACAATTCCGGTGAT+CGG 0.573296 5.2:-18891654 MS.gene64178:CDS
TTATTGATGTTCATATGGAA+GGG 0.573302 5.2:-18889999 MS.gene64178:CDS
TACAGCTGGTGACAACATGC+AGG 0.573623 5.2:-18891215 MS.gene64178:CDS
GTTTACCTTGGTGTTTGATG+GGG 0.573943 5.2:-18890122 MS.gene64178:CDS
TGTTGTTCGAGATAGCTGGC+TGG 0.577785 5.2:-18889734 MS.gene64178:CDS
TCAACCTTTACAACAAGAGC+TGG 0.578516 5.2:-18891902 MS.gene64178:CDS
AGGGTGATCACGGTAAGGAA+GGG 0.578571 5.2:-18890610 MS.gene64178:CDS
GTCCCAGCAGCTTTGAAAGT+GGG 0.578918 5.2:+18890872 None:intergenic
ATCCTGAAGAAAGTCGAGAT+CGG 0.580374 5.2:-18892120 MS.gene64178:CDS
CTTAGGCACTCCTCGTGCTG+TGG 0.581290 5.2:-18889953 MS.gene64178:CDS
ACAGGTGGATAATAGGCGGC+CGG 0.581461 5.2:-18891675 MS.gene64178:CDS
AGAGCCGCTAACAAAATCCA+TGG 0.582469 5.2:-18892094 MS.gene64178:CDS
GCGGCTTCAGTAGGGCAGGT+GGG 0.583093 5.2:-18890685 MS.gene64178:CDS
ACAGCAGCTTTATCTCTCCT+AGG 0.584069 5.2:+18890791 None:intergenic
GTGCGGAGGATCTAAAGCAT+TGG 0.584750 5.2:-18889672 MS.gene64178:CDS
AAGAACTTGTTACCCTCCAT+GGG 0.585951 5.2:+18892219 None:intergenic
TTTGATGAAGACAACAACTA+CGG 0.585972 5.2:-18891970 MS.gene64178:CDS
CTGAATTGTTCTCCGCCTTG+AGG 0.586466 5.2:+18891719 None:intergenic
CTGGGACCGGTGCTGCAAGT+GGG 0.586501 5.2:-18890856 MS.gene64178:CDS
TAACAAGCTTTCAAATTGTG+CGG 0.587763 5.2:-18889689 MS.gene64178:CDS
CCGGTGATCGGAGGGACGAG+GGG 0.588160 5.2:-18891642 MS.gene64178:CDS
GGTCCCAGCAGCTTTGAAAG+TGG 0.588685 5.2:+18890871 None:intergenic
AGCTCTTGTAGGCTCGCATG+TGG 0.588829 5.2:-18892007 MS.gene64178:CDS
GACAACATGCAGGAGGCGCG+TGG 0.589887 5.2:-18891205 MS.gene64178:CDS
ACAAGAGCTGGTCATTGAGA+GGG 0.590497 5.2:-18891890 MS.gene64178:CDS
ACTGCTGAGGAGGGTGATCA+CGG 0.591689 5.2:-18890620 MS.gene64178:CDS
ATAACAATTCCGGTGATCGG+AGG 0.593835 5.2:-18891651 MS.gene64178:CDS
AAAGCGCGCAAGCCAGCTGT+AGG 0.594081 5.2:-18890749 MS.gene64178:CDS
TGAGGAGGGTGATCACGGTA+AGG 0.601522 5.2:-18890615 MS.gene64178:CDS
GACCTAACTGGCTTATCAGA+GGG 0.601725 5.2:-18890050 MS.gene64178:CDS
TTGATGAAGACAACAACTAC+GGG 0.605890 5.2:-18891969 MS.gene64178:CDS
TGACAGAAGGGGCCCACCAG+GGG 0.606799 5.2:-18891152 MS.gene64178:CDS
ATAGGGAAATGATCAGAGGA+TGG 0.607417 5.2:+18889850 None:intergenic
AAGAATTGGATACTAAAGCT+CGG 0.610900 5.2:+18889917 None:intergenic
GTTGTTCGAGATAGCTGGCT+GGG 0.613586 5.2:-18889733 MS.gene64178:CDS
GCGTGGAACAATGCTTAGAA+GGG 0.613847 5.2:-18891188 MS.gene64178:CDS
ATAGCTGGCTGGGTAGTGCA+GGG 0.615893 5.2:-18889723 MS.gene64178:CDS
ACGCTGATGAAAAGAAAGGG+AGG 0.615898 5.2:-18890080 MS.gene64178:CDS
GCGGAGGTTTATGCGAATCA+GGG 0.618839 5.2:-18891941 MS.gene64178:CDS
TGATTCCTCAAACCAGCAGG+TGG 0.621595 5.2:-18891095 MS.gene64178:CDS
ATGACCCTTATTCCCATGGA+GGG 0.621729 5.2:-18892231 MS.gene64178:CDS
TTAACAAAGCATTAGCAGAA+GGG 0.622562 5.2:-18891342 MS.gene64178:CDS
AGTCCACCATCTAACAAGAC+CGG 0.623823 5.2:+18891465 None:intergenic
CGCTGATGAAAAGAAAGGGA+GGG 0.624251 5.2:-18890079 MS.gene64178:CDS
GGACCGGTCTTGTTAGATGG+TGG 0.624271 5.2:-18891468 MS.gene64178:CDS
TGTTGTTATCTAACGACCAA+GGG 0.624344 5.2:+18892148 None:intergenic
CTTCGGTAGGAATCTCCATA+GGG 0.626433 5.2:+18891434 None:intergenic
CAAAATAGGGAAATGATCAG+AGG 0.627319 5.2:+18889846 None:intergenic
CAACGCGACCTACAAGGCAC+AGG 0.630875 5.2:+18892325 None:intergenic
CAAGCTTTCAAATTGTGCGG+AGG 0.633636 5.2:-18889686 MS.gene64178:CDS
TGTTAGATGGTGGACTGAAG+TGG 0.634409 5.2:-18891458 MS.gene64178:CDS
GATAAGTTTGAAGATGGAGT+CGG 0.634809 5.2:-18891769 MS.gene64178:CDS
GTCTCGTACTGATACTGCTG+AGG 0.637703 5.2:-18890633 MS.gene64178:CDS
GCACCAAGGAGGCAAACAGG+TGG 0.637889 5.2:-18891690 MS.gene64178:CDS
CTATGGAGATTCCTACCGAA+GGG 0.639804 5.2:-18891432 MS.gene64178:CDS
AGACCTAACTGGCTTATCAG+AGG 0.640787 5.2:-18890051 MS.gene64178:CDS
TACCGAAGGGACCAATCAAG+AGG 0.640957 5.2:-18891419 MS.gene64178:CDS
TCCCAATCTGGTCTCAAGAG+TGG 0.641063 5.2:+18892278 None:intergenic
CCTATGGAGATTCCTACCGA+AGG 0.641771 5.2:-18891433 MS.gene64178:CDS
GAAATGGGGTCCTTACCTCA+AGG 0.642523 5.2:-18891734 MS.gene64178:CDS
AAGGCGGAGAACAATTCAGT+AGG 0.643383 5.2:-18891715 MS.gene64178:CDS
TGGAACAATGCTTAGAAGGG+AGG 0.644938 5.2:-18891185 MS.gene64178:CDS
CATTAAAGTGAAAATTAATG+CGG 0.647033 5.2:-18891542 MS.gene64178:CDS
ATGTTGTTATCTAACGACCA+AGG 0.654258 5.2:+18892147 None:intergenic
GGACGCAGCCCAATACAACC+TGG 0.663662 5.2:-18890728 MS.gene64178:CDS
CGTACTGATACTGCTGAGGA+GGG 0.664793 5.2:-18890629 MS.gene64178:CDS
TTGACAGAAGGGGCCCACCA+GGG 0.666668 5.2:-18891153 MS.gene64178:CDS
CGAAGGGACCAATCAAGAGG+AGG 0.667266 5.2:-18891416 MS.gene64178:CDS
GCGGAGAACAATTCAGTAGG+CGG 0.669602 5.2:-18891712 MS.gene64178:CDS
CAATTCAGTAGGCGGCACCA+AGG 0.670482 5.2:-18891704 MS.gene64178:CDS
TTCAGTAGGCGGCACCAAGG+AGG 0.672066 5.2:-18891701 MS.gene64178:CDS
GTGCCTTGTAGGTCGCGTTG+TGG 0.672685 5.2:-18892322 MS.gene64178:CDS
ATTCGCATAAACCTCCGCCA+TGG 0.672714 5.2:+18891946 None:intergenic
CATGACCCTTATTCCCATGG+AGG 0.673821 5.2:-18892232 MS.gene64178:CDS
GCAAACAGGTGGATAATAGG+CGG 0.679369 5.2:-18891679 MS.gene64178:CDS
CTCGCAACAACAGAGTTGAG+AGG 0.680538 5.2:-18889804 MS.gene64178:CDS
AGCTGGTGACAACATGCAGG+AGG 0.685128 5.2:-18891212 MS.gene64178:CDS
GAGGTTTATGCGAATCAGGG+TGG 0.688788 5.2:-18891938 MS.gene64178:CDS
GGTAGTAGCAAGAAGAAATG+GGG 0.694604 5.2:-18891748 MS.gene64178:CDS
ACAACAACTACGGGCCATGG+CGG 0.708763 5.2:-18891960 MS.gene64178:CDS
GCAGCTTTATCTCTCCTAGG+CGG 0.715858 5.2:+18890794 None:intergenic
TCAATGTCAATTGATAACTG+TGG 0.721205 5.2:-18891592 MS.gene64178:CDS
AGTCCAGCTTTACTCCAAGG+CGG 0.722612 5.2:-18892196 MS.gene64178:CDS
ATGGGGTCCTTACCTCAAGG+CGG 0.760082 5.2:-18891731 MS.gene64178:CDS
TAATCATAAGATGACCAGCG+CGG 0.772588 5.2:-18891035 MS.gene64178:CDS
GTGATGATTGCTGAGCAATG+GGG 0.789901 5.2:+18891071 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTAAAGTGAAAATTAATG+CGG - chr5.2:18890428-18890447 MS.gene64178:intron 20.0%
!! CTAAAATTAAATTCCTTGTT+TGG - chr5.2:18891515-18891534 MS.gene64178:CDS 20.0%
!!! CAAACAAGGAATTTAATTTT+AGG + chr5.2:18891517-18891536 None:intergenic 20.0%
!!! GTTAATTTTTTTTCGTTACA+TGG - chr5.2:18890461-18890480 MS.gene64178:intron 20.0%
! ATTAGTGCTAAAATTGAAGA+GGG - chr5.2:18891724-18891743 MS.gene64178:CDS 25.0%
! TATTAGTGCTAAAATTGAAG+AGG - chr5.2:18891723-18891742 MS.gene64178:CDS 25.0%
! TGATCTGACTTTGTTAAATT+CGG + chr5.2:18890606-18890625 None:intergenic 25.0%
! TGTTGAAAGTAATAAAATCG+AGG - chr5.2:18891576-18891595 MS.gene64178:CDS 25.0%
! TTATTGATGTTCATATGGAA+GGG - chr5.2:18891971-18891990 MS.gene64178:CDS 25.0%
! TTTACTTGGTTTAAAAGCTT+AGG - chr5.2:18892000-18892019 MS.gene64178:CDS 25.0%
! TTTCCAGTCACAAATTATAT+GGG - chr5.2:18890403-18890422 MS.gene64178:intron 25.0%
!! AAGCTTTTAAACCAAGTAAA+AGG + chr5.2:18892000-18892019 None:intergenic 25.0%
!! AGCTTTTAAACCAAGTAAAA+GGG + chr5.2:18891999-18892018 None:intergenic 25.0%
!!! CTTCAATTTTAGCACTAATA+TGG + chr5.2:18891723-18891742 None:intergenic 25.0%
!!! GAGTTTTGTCTAACAAAATA+GGG + chr5.2:18892140-18892159 None:intergenic 25.0%
!!! TCCAGTTTTTGAAGATAAAA+CGG - chr5.2:18891409-18891428 MS.gene64178:CDS 25.0%
AAATAACTGCATCCAAGAAT+TGG + chr5.2:18892070-18892089 None:intergenic 30.0%
AAGAATTGGATACTAAAGCT+CGG + chr5.2:18892056-18892075 None:intergenic 30.0%
ACGAAAAAAAATTAACGACC+TGG + chr5.2:18890457-18890476 None:intergenic 30.0%
ATTATGGAAGCTAATGGAAT+TGG - chr5.2:18890701-18890720 MS.gene64178:CDS 30.0%
CAATAGTTTCAGACAGAAAA+AGG + chr5.2:18891558-18891577 None:intergenic 30.0%
CATGGATACCACAAAAAATT+GGG - chr5.2:18889894-18889913 MS.gene64178:CDS 30.0%
CTAGACAAATAAGTTTACCT+TGG - chr5.2:18891836-18891855 MS.gene64178:CDS 30.0%
CTTATTGATGTTCATATGGA+AGG - chr5.2:18891970-18891989 MS.gene64178:CDS 30.0%
CTTTCAAATTTGAGAATGTC+TGG - chr5.2:18892190-18892209 MS.gene64178:CDS 30.0%
CTTTCCAGTCACAAATTATA+TGG - chr5.2:18890402-18890421 MS.gene64178:intron 30.0%
GACTTAAAGACAGCATTTAT+TGG + chr5.2:18890993-18891012 None:intergenic 30.0%
TAAATTCGGAGCAAATACTT+TGG + chr5.2:18890592-18890611 None:intergenic 30.0%
TAACAAGCTTTCAAATTGTG+CGG - chr5.2:18892281-18892300 MS.gene64178:CDS 30.0%
TTTGATGAAGACAACAACTA+CGG - chr5.2:18890000-18890019 MS.gene64178:CDS 30.0%
! ACGAATTTTTGTATGCACAT+GGG - chr5.2:18890664-18890683 MS.gene64178:CDS 30.0%
! AGACTCATGGAATTTTATTC+GGG - chr5.2:18891807-18891826 MS.gene64178:CDS 30.0%
! CCTTGTTTGGTATTATAAAC+CGG - chr5.2:18891528-18891547 MS.gene64178:CDS 30.0%
! GAGACTCATGGAATTTTATT+CGG - chr5.2:18891806-18891825 MS.gene64178:CDS 30.0%
! GAGGAATTTCGTTATCTTTT+GGG - chr5.2:18891595-18891614 MS.gene64178:CDS 30.0%
! TCAATGTCAATTGATAACTG+TGG - chr5.2:18890378-18890397 MS.gene64178:intron 30.0%
! TTAACAAAGCATTAGCAGAA+GGG - chr5.2:18890628-18890647 MS.gene64178:CDS 30.0%
!! AGTTTTTGAAGATAAAACGG+CGG - chr5.2:18891412-18891431 MS.gene64178:CDS 30.0%
!! GGAGTTTTGTCTAACAAAAT+AGG + chr5.2:18892141-18892160 None:intergenic 30.0%
!! TTCAGAATTTGCTGTCAAAT+GGG - chr5.2:18891051-18891070 MS.gene64178:CDS 30.0%
!! TTTCAGAATTTGCTGTCAAA+TGG - chr5.2:18891050-18891069 MS.gene64178:CDS 30.0%
!!! AAGATTTTCTAGCTTTGCAT+TGG + chr5.2:18892094-18892113 None:intergenic 30.0%
!!! AGATTTTCTAGCTTTGCATT+GGG + chr5.2:18892093-18892112 None:intergenic 30.0%
!!! GGTAAGTTTTGTTTTGTTTG+TGG - chr5.2:18890147-18890166 MS.gene64178:CDS 30.0%
!!! TGTTTTGTTTGTGGCATTAT+AGG - chr5.2:18890156-18890175 MS.gene64178:CDS 30.0%
AATACAACCTGGCTCATTTA+TGG - chr5.2:18891253-18891272 MS.gene64178:CDS 35.0%
AATAGAATTAGTAGAGGTGG+AGG - chr5.2:18891640-18891659 MS.gene64178:CDS 35.0%
ATAAATGAGCCAGGTTGTAT+TGG + chr5.2:18891254-18891273 None:intergenic 35.0%
ATAAGGGTCATGCGATATTT+CGG + chr5.2:18889730-18889749 None:intergenic 35.0%
ATGTTGTTATCTAACGACCA+AGG + chr5.2:18889826-18889845 None:intergenic 35.0%
CAAAATAGGGAAATGATCAG+AGG + chr5.2:18892127-18892146 None:intergenic 35.0%
CCACCTCTACTAATTCTATT+AGG + chr5.2:18891640-18891659 None:intergenic 35.0%
CCATGGATACCACAAAAAAT+TGG - chr5.2:18889893-18889912 MS.gene64178:CDS 35.0%
CCGGTTTATAATACCAAACA+AGG + chr5.2:18891531-18891550 None:intergenic 35.0%
CCTAATAGAATTAGTAGAGG+TGG - chr5.2:18891637-18891656 MS.gene64178:CDS 35.0%
GATAAGTTTGAAGATGGAGT+CGG - chr5.2:18890201-18890220 MS.gene64178:intron 35.0%
GCACCTAATAGAATTAGTAG+AGG - chr5.2:18891634-18891653 MS.gene64178:CDS 35.0%
GCTATCAAATACGAGAAGTT+GGG - chr5.2:18890126-18890145 MS.gene64178:CDS 35.0%
TAAATGAGCCAGGTTGTATT+GGG + chr5.2:18891253-18891272 None:intergenic 35.0%
TCAGACAGAAAAAGGATATC+CGG + chr5.2:18891550-18891569 None:intergenic 35.0%
TCTATTCATGGAATTCAGGA+TGG - chr5.2:18892390-18892409 MS.gene64178:CDS 35.0%
TGAAAATTAATGCGGAATCC+AGG - chr5.2:18890436-18890455 MS.gene64178:intron 35.0%
TGCAGTGATAAGTTTGAAGA+TGG - chr5.2:18890195-18890214 MS.gene64178:CDS 35.0%
TGCTATCAAATACGAGAAGT+TGG - chr5.2:18890125-18890144 MS.gene64178:CDS 35.0%
TGGGCTTATTGATGTTCATA+TGG - chr5.2:18891966-18891985 MS.gene64178:CDS 35.0%
TGTTGTTATCTAACGACCAA+GGG + chr5.2:18889825-18889844 None:intergenic 35.0%
TTCACGCTGATGAAAAGAAA+GGG - chr5.2:18891887-18891906 MS.gene64178:CDS 35.0%
TTCGTTACATGGAATGTCAA+CGG - chr5.2:18890472-18890491 MS.gene64178:intron 35.0%
TTGATGAAGACAACAACTAC+GGG - chr5.2:18890001-18890020 MS.gene64178:CDS 35.0%
! CGAATTTTTGTATGCACATG+GGG - chr5.2:18890665-18890684 MS.gene64178:CDS 35.0%
! CGAGGAATTTCGTTATCTTT+TGG - chr5.2:18891594-18891613 MS.gene64178:CDS 35.0%
! GAATTTTTGTATGCACATGG+GGG - chr5.2:18890666-18890685 MS.gene64178:CDS 35.0%
! GACGAATTTTTGTATGCACA+TGG - chr5.2:18890663-18890682 MS.gene64178:CDS 35.0%
! GACTCATGGAATTTTATTCG+GGG - chr5.2:18891808-18891827 MS.gene64178:CDS 35.0%
! GAGCTTTAGTATCCAATTCT+TGG - chr5.2:18892055-18892074 MS.gene64178:CDS 35.0%
! GTATCCATGGATTTTGTTAG+CGG + chr5.2:18889883-18889902 None:intergenic 35.0%
! GTTAACAAAGCATTAGCAGA+AGG - chr5.2:18890627-18890646 MS.gene64178:CDS 35.0%
!! AAATACTTTGGTTCTGGTTC+TGG + chr5.2:18890580-18890599 None:intergenic 35.0%
!! AAGTTTACCTTGGTGTTTGA+TGG - chr5.2:18891846-18891865 MS.gene64178:CDS 35.0%
!! AGAAGCATTATGGAAGCTAA+TGG - chr5.2:18890695-18890714 MS.gene64178:CDS 35.0%
!! AGTTTACCTTGGTGTTTGAT+GGG - chr5.2:18891847-18891866 MS.gene64178:CDS 35.0%
!! GCCGTTTTATCTTCAAAAAC+TGG + chr5.2:18891413-18891432 None:intergenic 35.0%
!! GTTTTTGAAGATAAAACGGC+GGG - chr5.2:18891413-18891432 MS.gene64178:CDS 35.0%
!! TAATTTTAGGAATTACGCGC+AGG + chr5.2:18891504-18891523 None:intergenic 35.0%
!!! AATCTGTGCCCAATTTTTTG+TGG + chr5.2:18889905-18889924 None:intergenic 35.0%
!!! ATCAGTACGAGACCTTTTTT+TGG + chr5.2:18891330-18891349 None:intergenic 35.0%
!!! CCAATTTTTTGTGGTATCCA+TGG + chr5.2:18889896-18889915 None:intergenic 35.0%
!!! TCAGTACGAGACCTTTTTTT+GGG + chr5.2:18891329-18891348 None:intergenic 35.0%
AATAAGCCCAGCATCTTGAA+TGG + chr5.2:18891956-18891975 None:intergenic 40.0%
AGCTCAGCTTGAGTAAGATT+CGG + chr5.2:18889619-18889638 None:intergenic 40.0%
AGTGCTAAAATTGAAGAGGG+CGG - chr5.2:18891727-18891746 MS.gene64178:CDS 40.0%
ATAGGGAAATGATCAGAGGA+TGG + chr5.2:18892123-18892142 None:intergenic 40.0%
ATCCTGAAGAAAGTCGAGAT+CGG - chr5.2:18889850-18889869 MS.gene64178:CDS 40.0%
ATGACAATGGGCCCAAAAAA+AGG - chr5.2:18891315-18891334 MS.gene64178:CDS 40.0%
ATGGAAGCTAATGGAATTGG+AGG - chr5.2:18890704-18890723 MS.gene64178:CDS 40.0%
ATTCCATGCTACGATACTCA+TGG + chr5.2:18891464-18891483 None:intergenic 40.0%
CGATATTTCGGTTCCCAAAT+AGG + chr5.2:18889718-18889737 None:intergenic 40.0%
CGGTAGTAGCAAGAAGAAAT+GGG - chr5.2:18890221-18890240 MS.gene64178:intron 40.0%
CTTCACGCTGATGAAAAGAA+AGG - chr5.2:18891886-18891905 MS.gene64178:CDS 40.0%
GGAATAACAATTCCGGTGAT+CGG - chr5.2:18890316-18890335 MS.gene64178:intron 40.0%
GGTAAACAAGCCTATTCATC+TGG - chr5.2:18889669-18889688 MS.gene64178:intron 40.0%
GGTAGTAGCAAGAAGAAATG+GGG - chr5.2:18890222-18890241 MS.gene64178:intron 40.0%
TAATCATAAGATGACCAGCG+CGG - chr5.2:18890935-18890954 MS.gene64178:CDS 40.0%
TCAACCTTTACAACAAGAGC+TGG - chr5.2:18890068-18890087 MS.gene64178:CDS 40.0%
TCGCTCTATTCATGGAATTC+AGG - chr5.2:18892386-18892405 MS.gene64178:CDS 40.0%
TCGGTAGTAGCAAGAAGAAA+TGG - chr5.2:18890220-18890239 MS.gene64178:intron 40.0%
TCTCTTCTTCTAGCAGTTTC+TGG + chr5.2:18891790-18891809 None:intergenic 40.0%
TGGATGTTCACAGGATTCTA+TGG - chr5.2:18891760-18891779 MS.gene64178:CDS 40.0%
TGTGATGATTGCTGAGCAAT+GGG + chr5.2:18890903-18890922 None:intergenic 40.0%
TTGATGTTGTTCGAGATAGC+TGG - chr5.2:18892232-18892251 MS.gene64178:CDS 40.0%
TTGTGATGATTGCTGAGCAA+TGG + chr5.2:18890904-18890923 None:intergenic 40.0%
! ATGACCAGCTCTTGTTGTAA+AGG + chr5.2:18890075-18890094 None:intergenic 40.0%
! CACCAGCTGTAGAATTTTGT+GGG + chr5.2:18890746-18890765 None:intergenic 40.0%
! CAGATTCACCAATTGCCTTT+TGG - chr5.2:18889919-18889938 MS.gene64178:CDS 40.0%
! CTTTCTTTTCATCAGCGTGA+AGG + chr5.2:18891888-18891907 None:intergenic 40.0%
! GATCACCGGAATTGTTATTC+CGG + chr5.2:18890317-18890336 None:intergenic 40.0%
! TCACCAGCTGTAGAATTTTG+TGG + chr5.2:18890747-18890766 None:intergenic 40.0%
!! AAGAACTTGTTACCCTCCAT+GGG + chr5.2:18889754-18889773 None:intergenic 40.0%
!! AGGATGCAGATTTTGACAGA+AGG - chr5.2:18890805-18890824 MS.gene64178:CDS 40.0%
!! GATGCAGATTTTGACAGAAG+GGG - chr5.2:18890807-18890826 MS.gene64178:CDS 40.0%
!! GGATGCAGATTTTGACAGAA+GGG - chr5.2:18890806-18890825 MS.gene64178:CDS 40.0%
!! GTTTACCTTGGTGTTTGATG+GGG - chr5.2:18891848-18891867 MS.gene64178:CDS 40.0%
!! TAAGAACTTGTTACCCTCCA+TGG + chr5.2:18889755-18889774 None:intergenic 40.0%
!! TGCTGGTTTGAGGAATCAAA+GGG + chr5.2:18890873-18890892 None:intergenic 40.0%
!! TTTACCTTGGTGTTTGATGG+GGG - chr5.2:18891849-18891868 MS.gene64178:CDS 40.0%
!!! CGCTTTATTTTGGCGTAACA+CGG - chr5.2:18891666-18891685 MS.gene64178:CDS 40.0%
AACAAGAGCTGGTCATTGAG+AGG - chr5.2:18890079-18890098 MS.gene64178:CDS 45.0%
AACCCTCTGATAAGCCAGTT+AGG + chr5.2:18891925-18891944 None:intergenic 45.0%
AACTCATTGCAGCAAGCTTC+AGG - chr5.2:18892326-18892345 MS.gene64178:CDS 45.0%
AAGGCGGAGAACAATTCAGT+AGG - chr5.2:18890255-18890274 MS.gene64178:intron 45.0%
AATCAGGGTGGAAATTGCGT+TGG - chr5.2:18890044-18890063 MS.gene64178:CDS 45.0%
AATGTCTGGAGAGTAGAGGA+AGG - chr5.2:18892204-18892223 MS.gene64178:CDS 45.0%
ACAAGAGCTGGTCATTGAGA+GGG - chr5.2:18890080-18890099 MS.gene64178:CDS 45.0%
ACGCTGATGAAAAGAAAGGG+AGG - chr5.2:18891890-18891909 MS.gene64178:CDS 45.0%
AGACCAGATTGGGACCTATT+TGG - chr5.2:18889701-18889720 MS.gene64178:CDS 45.0%
AGAGCCGCTAACAAAATCCA+TGG - chr5.2:18889876-18889895 MS.gene64178:CDS 45.0%
AGCAGAAGGGATGAACGAAA+AGG - chr5.2:18890641-18890660 MS.gene64178:CDS 45.0%
AGCAGAAGTCGCTCTATTCA+TGG - chr5.2:18892378-18892397 MS.gene64178:CDS 45.0%
AGCCCACAAAATTCTACAGC+TGG - chr5.2:18890741-18890760 MS.gene64178:CDS 45.0%
AGTCCACCATCTAACAAGAC+CGG + chr5.2:18890508-18890527 None:intergenic 45.0%
ATAACAATTCCGGTGATCGG+AGG - chr5.2:18890319-18890338 MS.gene64178:intron 45.0%
ATGACCCTTATTCCCATGGA+GGG - chr5.2:18889739-18889758 MS.gene64178:CDS 45.0%
ATGGAATGTCAACGGTCTGA+CGG - chr5.2:18890480-18890499 MS.gene64178:intron 45.0%
ATGTCTGGAGAGTAGAGGAA+GGG - chr5.2:18892205-18892224 MS.gene64178:CDS 45.0%
CAAATTTCTGTATTCCGCGC+TGG + chr5.2:18890952-18890971 None:intergenic 45.0%
CAAGCTTTCAAATTGTGCGG+AGG - chr5.2:18892284-18892303 MS.gene64178:CDS 45.0%
CAGCATCTTGAATGGCTTGA+CGG + chr5.2:18891948-18891967 None:intergenic 45.0%
CCATGAAGCCAAAAGGCAAT+TGG + chr5.2:18889930-18889949 None:intergenic 45.0%
CGCTGATGAAAAGAAAGGGA+GGG - chr5.2:18891891-18891910 MS.gene64178:CDS 45.0%
CTATGGAGATTCCTACCGAA+GGG - chr5.2:18890538-18890557 MS.gene64178:intron 45.0%
CTGAATCTCAATGCTGAGCA+TGG - chr5.2:18889577-18889596 MS.gene64178:intron 45.0%
CTGCTAGAAGAAGAGACTCA+TGG - chr5.2:18891794-18891813 MS.gene64178:CDS 45.0%
CTGTTGTGTCTCAAGCTCTT+GGG - chr5.2:18891198-18891217 MS.gene64178:CDS 45.0%
CTTAGTCCAGCTTTACTCCA+AGG - chr5.2:18889771-18889790 MS.gene64178:CDS 45.0%
CTTCGGTAGGAATCTCCATA+GGG + chr5.2:18890539-18890558 None:intergenic 45.0%
CTTTGATTCCTCAAACCAGC+AGG - chr5.2:18890872-18890891 MS.gene64178:CDS 45.0%
GACCAGATTGGGACCTATTT+GGG - chr5.2:18889702-18889721 MS.gene64178:CDS 45.0%
GAGGCAAACAGGTGGATAAT+AGG - chr5.2:18890288-18890307 MS.gene64178:intron 45.0%
GCAAACAGGTGGATAATAGG+CGG - chr5.2:18890291-18890310 MS.gene64178:intron 45.0%
GCGTGGAACAATGCTTAGAA+GGG - chr5.2:18890782-18890801 MS.gene64178:CDS 45.0%
GTCAAGCCATTCAAGATGCT+GGG - chr5.2:18891947-18891966 MS.gene64178:CDS 45.0%
GTGATGATTGCTGAGCAATG+GGG + chr5.2:18890902-18890921 None:intergenic 45.0%
GTTACCCTCCATGGGAATAA+GGG + chr5.2:18889746-18889765 None:intergenic 45.0%
TAACAATTCCGGTGATCGGA+GGG - chr5.2:18890320-18890339 MS.gene64178:intron 45.0%
TCAAGAGTGGCCAGATGAAT+AGG + chr5.2:18889682-18889701 None:intergenic 45.0%
TGAGAATGTCTGGAGAGTAG+AGG - chr5.2:18892200-18892219 MS.gene64178:CDS 45.0%
TGGAACAATGCTTAGAAGGG+AGG - chr5.2:18890785-18890804 MS.gene64178:CDS 45.0%
TGTTACCCTCCATGGGAATA+AGG + chr5.2:18889747-18889766 None:intergenic 45.0%
TTCCCAAATAGGTCCCAATC+TGG + chr5.2:18889707-18889726 None:intergenic 45.0%
! ACAGCAGCTTTATCTCTCCT+AGG + chr5.2:18891182-18891201 None:intergenic 45.0%
! AGACCTAACTGGCTTATCAG+AGG - chr5.2:18891919-18891938 MS.gene64178:CDS 45.0%
! CATGCTCAGCATTGAGATTC+AGG + chr5.2:18889579-18889598 None:intergenic 45.0%
! CGGAGCAAATACTTTGGTTC+TGG + chr5.2:18890586-18890605 None:intergenic 45.0%
! GACCTAACTGGCTTATCAGA+GGG - chr5.2:18891920-18891939 MS.gene64178:CDS 45.0%
! GCGCCCATATAATTTGTGAC+TGG + chr5.2:18890409-18890428 None:intergenic 45.0%
! TTTGTGGGCTCACTTGCTTT+TGG + chr5.2:18890731-18890750 None:intergenic 45.0%
! TTTTGGGCCCATTGTCATCA+GGG + chr5.2:18891313-18891332 None:intergenic 45.0%
! TTTTTGTATGCACATGGGGG+AGG - chr5.2:18890669-18890688 MS.gene64178:CDS 45.0%
!! CTGCTGGTTTGAGGAATCAA+AGG + chr5.2:18890874-18890893 None:intergenic 45.0%
!! TGTTAGATGGTGGACTGAAG+TGG - chr5.2:18890512-18890531 MS.gene64178:intron 45.0%
!! TTGTGGGCTCACTTGCTTTT+GGG + chr5.2:18890730-18890749 None:intergenic 45.0%
!! TTTTTGGGCCCATTGTCATC+AGG + chr5.2:18891314-18891333 None:intergenic 45.0%
!!! CCAATTGCCTTTTGGCTTCA+TGG - chr5.2:18889927-18889946 MS.gene64178:CDS 45.0%
!!! GTGGAGGCATCGCTTTATTT+TGG - chr5.2:18891656-18891675 MS.gene64178:CDS 45.0%
!!! TGGAAGGGTACCCTTTTACT+TGG - chr5.2:18891986-18892005 MS.gene64178:CDS 45.0%
!!! TTTTGGCTTCATGGACGAGA+GGG - chr5.2:18889936-18889955 MS.gene64178:CDS 45.0%
AAGACAACAACTACGGGCCA+TGG - chr5.2:18890007-18890026 MS.gene64178:CDS 50.0%
AAGTCCCCCATCAAACACCA+AGG + chr5.2:18891856-18891875 None:intergenic 50.0%
AATTGAAGAGGGCGGTGGTA+TGG - chr5.2:18891735-18891754 MS.gene64178:CDS 50.0%
ACTCTGTTGTTGCGAGTCAC+AGG + chr5.2:18892162-18892181 None:intergenic 50.0%
ACTTTCAAAGCTGCTGGGAC+CGG - chr5.2:18891101-18891120 MS.gene64178:CDS 50.0%
AGGGTGATCACGGTAAGGAA+GGG - chr5.2:18891360-18891379 MS.gene64178:CDS 50.0%
AGTCCAGCTTTACTCCAAGG+CGG - chr5.2:18889774-18889793 MS.gene64178:CDS 50.0%
ATCGTAGCATGGAATTGCCG+AGG - chr5.2:18891469-18891488 MS.gene64178:CDS 50.0%
ATTCGCATAAACCTCCGCCA+TGG + chr5.2:18890027-18890046 None:intergenic 50.0%
CATGACCCTTATTCCCATGG+AGG - chr5.2:18889738-18889757 MS.gene64178:CDS 50.0%
CCTATGGAGATTCCTACCGA+AGG - chr5.2:18890537-18890556 MS.gene64178:intron 50.0%
CCTTCGGTAGGAATCTCCAT+AGG + chr5.2:18890540-18890559 None:intergenic 50.0%
CGCGTGGAACAATGCTTAGA+AGG - chr5.2:18890781-18890800 MS.gene64178:CDS 50.0%
CGTCAAGCCATTCAAGATGC+TGG - chr5.2:18891946-18891965 MS.gene64178:CDS 50.0%
CTCCCACTTTCAAAGCTGCT+GGG - chr5.2:18891096-18891115 MS.gene64178:CDS 50.0%
CTCCGATCTCGACTTTCTTC+AGG + chr5.2:18889855-18889874 None:intergenic 50.0%
CTCGCAACAACAGAGTTGAG+AGG - chr5.2:18892166-18892185 MS.gene64178:CDS 50.0%
CTCTCGTCCATGAAGCCAAA+AGG + chr5.2:18889937-18889956 None:intergenic 50.0%
CTGAATTGTTCTCCGCCTTG+AGG + chr5.2:18890254-18890273 None:intergenic 50.0%
CTGGTCATTGAGAGGGAAGA+AGG - chr5.2:18890087-18890106 MS.gene64178:CDS 50.0%
GAAATGGGGTCCTTACCTCA+AGG - chr5.2:18890236-18890255 MS.gene64178:intron 50.0%
GAGGTTTATGCGAATCAGGG+TGG - chr5.2:18890032-18890051 MS.gene64178:CDS 50.0%
GCCACTCTTGAGACCAGATT+GGG - chr5.2:18889691-18889710 MS.gene64178:CDS 50.0%
GCGGAGAACAATTCAGTAGG+CGG - chr5.2:18890258-18890277 MS.gene64178:intron 50.0%
GCGGAGGTTTATGCGAATCA+GGG - chr5.2:18890029-18890048 MS.gene64178:CDS 50.0%
GCTAAAATTGAAGAGGGCGG+TGG - chr5.2:18891730-18891749 MS.gene64178:CDS 50.0%
GCTACGATACTCATGGCTCT+CGG + chr5.2:18891457-18891476 None:intergenic 50.0%
GCTGTTGTGTCTCAAGCTCT+TGG - chr5.2:18891197-18891216 MS.gene64178:CDS 50.0%
GTTGTTCGAGATAGCTGGCT+GGG - chr5.2:18892237-18892256 MS.gene64178:CDS 50.0%
TACAGCTGGTGACAACATGC+AGG - chr5.2:18890755-18890774 MS.gene64178:CDS 50.0%
TACCGAAGGGACCAATCAAG+AGG - chr5.2:18890551-18890570 MS.gene64178:intron 50.0%
TATCCACCTGTTTGCCTCCT+TGG + chr5.2:18890286-18890305 None:intergenic 50.0%
TCATTTATGGCTAGCGCTCG+CGG - chr5.2:18891266-18891285 MS.gene64178:CDS 50.0%
TCCCAATCTGGTCTCAAGAG+TGG + chr5.2:18889695-18889714 None:intergenic 50.0%
TCGCATGACCCTTATTCCCA+TGG - chr5.2:18889735-18889754 MS.gene64178:CDS 50.0%
TCTCCCACTTTCAAAGCTGC+TGG - chr5.2:18891095-18891114 MS.gene64178:CDS 50.0%
TCTTACTCAAGCTGAGCTGC+TGG - chr5.2:18889621-18889640 MS.gene64178:intron 50.0%
TGATTCCTCAAACCAGCAGG+TGG - chr5.2:18890875-18890894 MS.gene64178:CDS 50.0%
TGCGATCAAGGATCCTCTTC+AGG + chr5.2:18889801-18889820 None:intergenic 50.0%
TGGAATGTCAACGGTCTGAC+GGG - chr5.2:18890481-18890500 MS.gene64178:intron 50.0%
TGTCTGGAGAGTAGAGGAAG+GGG - chr5.2:18892206-18892225 MS.gene64178:CDS 50.0%
TGTTGTTCGAGATAGCTGGC+TGG - chr5.2:18892236-18892255 MS.gene64178:CDS 50.0%
TTACCACAACGCGACCTACA+AGG + chr5.2:18889654-18889673 None:intergenic 50.0%
TTGTTCTCCGCCTTGAGGTA+AGG + chr5.2:18890249-18890268 None:intergenic 50.0%
TTTATCTCTCCTAGGCGGCT+TGG + chr5.2:18891174-18891193 None:intergenic 50.0%
TTTGGGCCCATTGTCATCAG+GGG + chr5.2:18891312-18891331 None:intergenic 50.0%
! AACTTTTCCTCCACAGCACG+AGG + chr5.2:18892030-18892049 None:intergenic 50.0%
! CGTACTGATACTGCTGAGGA+GGG - chr5.2:18891341-18891360 MS.gene64178:CDS 50.0%
! CTCCTCTTGATTGGTCCCTT+CGG + chr5.2:18890556-18890575 None:intergenic 50.0%
! GAGCCATGAGTATCGTAGCA+TGG - chr5.2:18891458-18891477 MS.gene64178:CDS 50.0%
! GCAGCTTTATCTCTCCTAGG+CGG + chr5.2:18891179-18891198 None:intergenic 50.0%
! GTCTCGTACTGATACTGCTG+AGG - chr5.2:18891337-18891356 MS.gene64178:CDS 50.0%
! GTGCGGAGGATCTAAAGCAT+TGG - chr5.2:18892298-18892317 MS.gene64178:CDS 50.0%
! TCGTACTGATACTGCTGAGG+AGG - chr5.2:18891340-18891359 MS.gene64178:CDS 50.0%
! TCTTGATTGGTCCCTTCGGT+AGG + chr5.2:18890552-18890571 None:intergenic 50.0%
!! GGTATGGACTGGATGTTCAC+AGG - chr5.2:18891751-18891770 MS.gene64178:CDS 50.0%
!! GTCCCAGCAGCTTTGAAAGT+GGG + chr5.2:18891101-18891120 None:intergenic 50.0%
!!! CTTTTGGCTTCATGGACGAG+AGG - chr5.2:18889935-18889954 MS.gene64178:CDS 50.0%
ACAACAACTACGGGCCATGG+CGG - chr5.2:18890010-18890029 MS.gene64178:CDS 55.0%
ACAGGTGGATAATAGGCGGC+CGG - chr5.2:18890295-18890314 MS.gene64178:intron 55.0%
ACGATACTCATGGCTCTCGG+CGG + chr5.2:18891454-18891473 None:intergenic 55.0%
ACTGCTGAGGAGGGTGATCA+CGG - chr5.2:18891350-18891369 MS.gene64178:CDS 55.0%
AGCATGGAATTGCCGAGGCT+TGG - chr5.2:18891474-18891493 MS.gene64178:CDS 55.0%
AGCTCTTGTAGGCTCGCATG+TGG - chr5.2:18889963-18889982 MS.gene64178:CDS 55.0%
AGCTGGTGACAACATGCAGG+AGG - chr5.2:18890758-18890777 MS.gene64178:CDS 55.0%
ATAGCTGGCTGGGTAGTGCA+GGG - chr5.2:18892247-18892266 MS.gene64178:CDS 55.0%
ATGGGGTCCTTACCTCAAGG+CGG - chr5.2:18890239-18890258 MS.gene64178:intron 55.0%
CAATTCAGTAGGCGGCACCA+AGG - chr5.2:18890266-18890285 MS.gene64178:intron 55.0%
CGAAGGGACCAATCAAGAGG+AGG - chr5.2:18890554-18890573 MS.gene64178:CDS 55.0%
CTCTTGTAGGCTCGCATGTG+GGG - chr5.2:18889965-18889984 MS.gene64178:CDS 55.0%
GAAGATAAAACGGCGGGACC+TGG - chr5.2:18891419-18891438 MS.gene64178:CDS 55.0%
GAGAGGGTTGGAGCTCTTGT+AGG - chr5.2:18889952-18889971 MS.gene64178:CDS 55.0%
GAGGGTGATCACGGTAAGGA+AGG - chr5.2:18891359-18891378 MS.gene64178:CDS 55.0%
GCATGGAATTGCCGAGGCTT+GGG - chr5.2:18891475-18891494 MS.gene64178:CDS 55.0%
GCGCTAGCCATAAATGAGCC+AGG + chr5.2:18891263-18891282 None:intergenic 55.0%
GCTCTTGTAGGCTCGCATGT+GGG - chr5.2:18889964-18889983 MS.gene64178:CDS 55.0%
GGAGGGCTACAAGACCTAAC+TGG - chr5.2:18891908-18891927 MS.gene64178:CDS 55.0%
GGCCACTCTTGAGACCAGAT+TGG - chr5.2:18889690-18889709 MS.gene64178:CDS 55.0%
GGCGGAGGTTTATGCGAATC+AGG - chr5.2:18890028-18890047 MS.gene64178:CDS 55.0%
GGCGGCCGGAATAACAATTC+CGG - chr5.2:18890309-18890328 MS.gene64178:intron 55.0%
GTGGGTCCCCTGATGACAAT+GGG - chr5.2:18891303-18891322 MS.gene64178:CDS 55.0%
TGAGGAGGGTGATCACGGTA+AGG - chr5.2:18891355-18891374 MS.gene64178:CDS 55.0%
! GGTTCTGGCCTCCTCTTGAT+TGG + chr5.2:18890565-18890584 None:intergenic 55.0%
! GTGGACTGAAGTGGACCCTA+TGG - chr5.2:18890521-18890540 MS.gene64178:intron 55.0%
!! ACGGGACCGGTCTTGTTAGA+TGG - chr5.2:18890499-18890518 MS.gene64178:intron 55.0%
!! GGACCGGTCTTGTTAGATGG+TGG - chr5.2:18890502-18890521 MS.gene64178:intron 55.0%
!! GGGGAGGTGCAGAAGCATTA+TGG - chr5.2:18890685-18890704 MS.gene64178:CDS 55.0%
!! GGTCCCAGCAGCTTTGAAAG+TGG + chr5.2:18891102-18891121 None:intergenic 55.0%
AAAGCGCGCAAGCCAGCTGT+AGG - chr5.2:18891221-18891240 MS.gene64178:CDS 60.0%
AAGAGGGCGGTGGTATGGAC+TGG - chr5.2:18891740-18891759 MS.gene64178:CDS 60.0%
ACGACCAAGGGCTGCGATCA+AGG + chr5.2:18889813-18889832 None:intergenic 60.0%
ACTCCAAGGCGGACCTGAAG+AGG - chr5.2:18889785-18889804 MS.gene64178:CDS 60.0%
AGCTGACCCACTTGCAGCAC+CGG + chr5.2:18891123-18891142 None:intergenic 60.0%
ATTGGGCTGCGTCCTACAGC+TGG + chr5.2:18891236-18891255 None:intergenic 60.0%
CAACGCGACCTACAAGGCAC+AGG + chr5.2:18889648-18889667 None:intergenic 60.0%
CGATACTCATGGCTCTCGGC+GGG + chr5.2:18891453-18891472 None:intergenic 60.0%
CTGCTGGACCTGTGCCTTGT+AGG - chr5.2:18889637-18889656 MS.gene64178:intron 60.0%
CTTAGGCACTCCTCGTGCTG+TGG - chr5.2:18892017-18892036 MS.gene64178:CDS 60.0%
GATAGCTGGCTGGGTAGTGC+AGG - chr5.2:18892246-18892265 MS.gene64178:CDS 60.0%
GATCCTCTTCAGGTCCGCCT+TGG + chr5.2:18889791-18889810 None:intergenic 60.0%
GCACCAAGGAGGCAAACAGG+TGG - chr5.2:18890280-18890299 MS.gene64178:intron 60.0%
GGACGCAGCCCAATACAACC+TGG - chr5.2:18891242-18891261 MS.gene64178:CDS 60.0%
GGATCCTTGATCGCAGCCCT+TGG - chr5.2:18889806-18889825 MS.gene64178:CDS 60.0%
GGCTTCATGGACGAGAGGGT+TGG - chr5.2:18889940-18889959 MS.gene64178:CDS 60.0%
GGTAAGGAAGGGCAGCAAGC+TGG - chr5.2:18891371-18891390 MS.gene64178:CDS 60.0%
GGTCCGCCTTGGAGTAAAGC+TGG + chr5.2:18889780-18889799 None:intergenic 60.0%
GGTGGGTCCCCTGATGACAA+TGG - chr5.2:18891302-18891321 MS.gene64178:CDS 60.0%
GTGCCTTGTAGGTCGCGTTG+TGG - chr5.2:18889648-18889667 MS.gene64178:intron 60.0%
TAGCGCTCGCGGCTTCAGTA+GGG - chr5.2:18891277-18891296 MS.gene64178:CDS 60.0%
TGTCAACGGTCTGACGGGAC+CGG - chr5.2:18890486-18890505 MS.gene64178:intron 60.0%
TTCAGTAGGCGGCACCAAGG+AGG - chr5.2:18890269-18890288 MS.gene64178:intron 60.0%
TTGACAGAAGGGGCCCACCA+GGG - chr5.2:18890817-18890836 MS.gene64178:CDS 60.0%
TTTGACAGAAGGGGCCCACC+AGG - chr5.2:18890816-18890835 MS.gene64178:CDS 60.0%
ACAACTACGGGCCATGGCGG+AGG - chr5.2:18890013-18890032 MS.gene64178:CDS 65.0%
AGGCACTCCTCGTGCTGTGG+AGG - chr5.2:18892020-18892039 MS.gene64178:CDS 65.0%
CGCGCAGGTTTCCCAAGCCT+CGG + chr5.2:18891489-18891508 None:intergenic 65.0%
CTAGCGCTCGCGGCTTCAGT+AGG - chr5.2:18891276-18891295 MS.gene64178:CDS 65.0%
GAGCAATGGGGACCACCTGC+TGG + chr5.2:18890890-18890909 None:intergenic 65.0%
GCGGCACCAAGGAGGCAAAC+AGG - chr5.2:18890277-18890296 MS.gene64178:intron 65.0%
GCGGCTTCAGTAGGGCAGGT+GGG - chr5.2:18891285-18891304 MS.gene64178:CDS 65.0%
TCCGGTGATCGGAGGGACGA+GGG - chr5.2:18890327-18890346 MS.gene64178:intron 65.0%
TGACAGAAGGGGCCCACCAG+GGG - chr5.2:18890818-18890837 MS.gene64178:CDS 65.0%
TTCCGGTGATCGGAGGGACG+AGG - chr5.2:18890326-18890345 MS.gene64178:intron 65.0%
! CTCTCCTAGGCGGCTTGGCT+CGG + chr5.2:18891169-18891188 None:intergenic 65.0%
! GACAACATGCAGGAGGCGCG+TGG - chr5.2:18890765-18890784 MS.gene64178:CDS 65.0%
!! CTGGGACCGGTGCTGCAAGT+GGG - chr5.2:18891114-18891133 MS.gene64178:CDS 65.0%
!! GGGGACCACCTGCTGGTTTG+AGG + chr5.2:18890883-18890902 None:intergenic 65.0%
!! TAGGCGGCTTGGCTCGGCTT+GGG + chr5.2:18891163-18891182 None:intergenic 65.0%
AACGGCGGGACCTGGTAGCC+AGG - chr5.2:18891427-18891446 MS.gene64178:CDS 70.0%
CAAGCCGAGCCAAGCCGCCT+AGG - chr5.2:18891162-18891181 MS.gene64178:CDS 70.0%
CCCCTCGTCCCTCCGATCAC+CGG + chr5.2:18890331-18890350 None:intergenic 70.0%
CCGGTGATCGGAGGGACGAG+GGG - chr5.2:18890328-18890347 MS.gene64178:intron 70.0%
CGCGGCTTCAGTAGGGCAGG+TGG - chr5.2:18891284-18891303 MS.gene64178:CDS 70.0%
GCTCGCGGCTTCAGTAGGGC+AGG - chr5.2:18891281-18891300 MS.gene64178:CDS 70.0%
!! CTAGGCGGCTTGGCTCGGCT+TGG + chr5.2:18891164-18891183 None:intergenic 70.0%
!! GCTGGGACCGGTGCTGCAAG+TGG - chr5.2:18891113-18891132 MS.gene64178:CDS 70.0%
CTCATGGCTCTCGGCGGGCC+TGG + chr5.2:18891448-18891467 None:intergenic 75.0%
GAAGGGGCCCACCAGGGGAC+AGG - chr5.2:18890823-18890842 MS.gene64178:CDS 75.0%
GGGGACAGGCGCGGCAAGCA+AGG - chr5.2:18890837-18890856 MS.gene64178:CDS 75.0%
TCTCGGCGGGCCTGGCTACC+AGG + chr5.2:18891440-18891459 None:intergenic 75.0%
TGCCGCGCCTGTCCCCTGGT+GGG + chr5.2:18890833-18890852 None:intergenic 75.0%
TGCTTGCCGCGCCTGTCCCC+TGG + chr5.2:18890837-18890856 None:intergenic 75.0%
TTGCCGCGCCTGTCCCCTGG+TGG + chr5.2:18890834-18890853 None:intergenic 75.0%
!! GCGGCTTGGCTCGGCTTGGG+AGG + chr5.2:18891160-18891179 None:intergenic 75.0%
! GGCCCACCAGGGGACAGGCG+CGG - chr5.2:18890828-18890847 MS.gene64178:CDS 80.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 18889568 18892424 18889568 ID=MS.gene64178
chr5.2 mRNA 18889568 18892424 18889568 ID=MS.gene64178.t1;Parent=MS.gene64178
chr5.2 exon 18890552 18892424 18890552 ID=MS.gene64178.t1.exon1;Parent=MS.gene64178.t1
chr5.2 CDS 18890552 18892424 18890552 ID=cds.MS.gene64178.t1;Parent=MS.gene64178.t1
chr5.2 exon 18889671 18890219 18889671 ID=MS.gene64178.t1.exon2;Parent=MS.gene64178.t1
chr5.2 CDS 18889671 18890219 18889671 ID=cds.MS.gene64178.t1;Parent=MS.gene64178.t1
chr5.2 exon 18889568 18889584 18889568 ID=MS.gene64178.t1.exon3;Parent=MS.gene64178.t1
chr5.2 CDS 18889568 18889584 18889568 ID=cds.MS.gene64178.t1;Parent=MS.gene64178.t1
Gene Sequence

>MS.gene64178

ATGGAGAACCTGAATCTCAATGCTGAGCATGGAGCTGATTCTCAACGACCGAATCTTACTCAAGCTGAGCTGCTGGACCTGTGCCTTGTAGGTCGCGTTGTGGTAAACAAGCCTATTCATCTGGCCACTCTTGAGACCAGATTGGGACCTATTTGGGAACCGAAATATCGCATGACCCTTATTCCCATGGAGGGTAACAAGTTCTTAGTCCAGCTTTACTCCAAGGCGGACCTGAAGAGGATCCTTGATCGCAGCCCTTGGTCGTTAGATAACAACATGATCATCCTGAAGAAAGTCGAGATCGGAGAAGAGCCGCTAACAAAATCCATGGATACCACAAAAAATTGGGCACAGATTCACCAATTGCCTTTTGGCTTCATGGACGAGAGGGTTGGAGCTCTTGTAGGCTCGCATGTGGGGAAGATGATTAAGTTTGATGAAGACAACAACTACGGGCCATGGCGGAGGTTTATGCGAATCAGGGTGGAAATTGCGTTGGATCAACCTTTACAACAAGAGCTGGTCATTGAGAGGGAAGAAGGAGATAGTATACGTCTTGCTATCAAATACGAGAAGTTGGGTAAGTTTTGTTTTGTTTGTGGCATTATAGGTCACTCTGAAAGCGTCTGCAGTGATAAGTTTGAAGATGGAGTCGGTAGTAGCAAGAAGAAATGGGGTCCTTACCTCAAGGCGGAGAACAATTCAGTAGGCGGCACCAAGGAGGCAAACAGGTGGATAATAGGCGGCCGGAATAACAATTCCGGTGATCGGAGGGACGAGGGGACAACAATTAATGCTAATAATCATCAATCAATGTCAATTGATAACTGTGGTCTTTCCAGTCACAAATTATATGGGCGCATTAAAGTGAAAATTAATGCGGAATCCAGGTCGTTAATTTTTTTTCGTTACATGGAATGTCAACGGTCTGACGGGACCGGTCTTGTTAGATGGTGGACTGAAGTGGACCCTATGGAGATTCCTACCGAAGGGACCAATCAAGAGGAGGCCAGAACCAGAACCAAAGTATTTGCTCCGAATTTAACAAAGTCAGATCATGTTAACAAAGCATTAGCAGAAGGGATGAACGAAAAGGACGAATTTTTGTATGCACATGGGGGAGGTGCAGAAGCATTATGGAAGCTAATGGAATTGGAGGCCCAAAAGCAAGTGAGCCCACAAAATTCTACAGCTGGTGACAACATGCAGGAGGCGCGTGGAACAATGCTTAGAAGGGAGGATGCAGATTTTGACAGAAGGGGCCCACCAGGGGACAGGCGCGGCAAGCAAGGTCAACTTGCTCCCTTTGATTCCTCAAACCAGCAGGTGGTCCCCATTGCTCAGCAATCATCACAACAATTAATGATTAATCATAAGATGACCAGCGCGGAATACAGAAATTTGTTTGACAAGAATGCTGTGCCAATAAATGCTGTCTTTAAGTCTAATCAAACTGTCATAAAAGTGCAAAAAGTTGATCAGTTTCAGAATTTGCTGTCAAATGGGAATGAAGAGCAATCAATTGTGTCTCCCACTTTCAAAGCTGCTGGGACCGGTGCTGCAAGTGGGTCAGCTAGAGACAAAAACTGCCTCCCAAGCCGAGCCAAGCCGCCTAGGAGAGATAAAGCTGCTGTTGTGTCTCAAGCTCTTGGGAAAGCGCGCAAGCCAGCTGTAGGACGCAGCCCAATACAACCTGGCTCATTTATGGCTAGCGCTCGCGGCTTCAGTAGGGCAGGTGGGTCCCCTGATGACAATGGGCCCAAAAAAAGGTCTCGTACTGATACTGCTGAGGAGGGTGATCACGGTAAGGAAGGGCAGCAAGCTGGAGCTGTCTACAACAATCCAGTTTTTGAAGATAAAACGGCGGGACCTGGTAGCCAGGCCCGCCGAGAGCCATGAGTATCGTAGCATGGAATTGCCGAGGCTTGGGAAACCTGCGCGTAATTCCTAAAATTAAATTCCTTGTTTGGTATTATAAACCGGATATCCTTTTTCTGTCTGAAACTATTGTTGAAAGTAATAAAATCGAGGAATTTCGTTATCTTTTGGGTTATGATTCTTGTTTTGCACCTAATAGAATTAGTAGAGGTGGAGGCATCGCTTTATTTTGGCGTAACACGGTTAATTGTAGTATTATTAATTACTCGAATAACCATATTAGTGCTAAAATTGAAGAGGGCGGTGGTATGGACTGGATGTTCACAGGATTCTATGGATATCCAGAAACTGCTAGAAGAAGAGACTCATGGAATTTTATTCGGGGTCTTGCTAGACAAATAAGTTTACCTTGGTGTTTGATGGGGGACTTTAATGATATCCTTCACGCTGATGAAAAGAAAGGGAGGGCTACAAGACCTAACTGGCTTATCAGAGGGTTCCGTCAAGCCATTCAAGATGCTGGGCTTATTGATGTTCATATGGAAGGGTACCCTTTTACTTGGTTTAAAAGCTTAGGCACTCCTCGTGCTGTGGAGGAAAAGTTAGACCGAGCTTTAGTATCCAATTCTTGGATGCAGTTATTTCCCAATGCAAAGCTAGAAAATCTTGTTGCTCCATCCTCTGATCATTTCCCTATTTTGTTAGACAAAACTCCTGTGACTCGCAACAACAGAGTTGAGAGGACTTTCAAATTTGAGAATGTCTGGAGAGTAGAGGAAGGGGTGTTTGATGTTGTTCGAGATAGCTGGCTGGGTAGTGCAGGGAGTAATGTTACTAACAAGCTTTCAAATTGTGCGGAGGATCTAAAGCATTGGAGTAAAACTCATTGCAGCAAGCTTCAGGTTGATATAGAAAATTGTAGAAAACAACTCAGCAGAAGTCGCTCTATTCATGGAATTCAGGATGGCGCTTACTTTGA
Protein sequence

>MS.gene64178.t1

MENLNLNAEHGADSQRPNLTQAELLDLCLVGRVVVNKPIHLATLETRLGPIWEPKYRMTLIPMEGNKFLVQLYSKADLKRILDRSPWSLDNNMIILKKVEIGEEPLTKSMDTTKNWAQIHQLPFGFMDERVGALVGSHVGKMIKFDEDNNYGPWRRFMRIRVEIALDQPLQQELVIEREEGDSIRLAIKYEKLGKFCFVCGIIGHSESVCSDKFEDGVGSSKKKWGPYLKAENNSVGGTKEANRWIIGGRNNNSGDRRDEGTTINANNHQSMSIDNCGLSSHKLYGRIKVKINAESRSLIFFRYMECQRSDGTGLVRWWTEVDPMEIPTEGTNQEEARTRTKVFAPNLTKSDHVNKALAEGMNEKDEFLYAHGGGAEALWKLMELEAQKQVSPQNSTAGDNMQEARGTMLRREDADFDRRGPPGDRRGKQGQLAPFDSSNQQVVPIAQQSSQQLMINHKMTSAEYRNLFDKNAVPINAVFKSNQTVIKVQKVDQFQNLLSNGNEEQSIVSPTFKAAGTGAASGSARDKNCLPSRAKPPRRDKAAVVSQALGKARKPAVGRSPIQPGSFMASARGFSRAGGSPDDNGPKKRSRTDTAEEGDHGKEGQQAGAVYNNPVFEDKTAGPGFYGYPETARRRDSWNFIRGLARQISLPWCLMGDFNDILHADEKKGRATRPNWLIRGFRQAIQDAGLIDVHMEGYPFTWFKSLGTPRAVEEKLDRALVSNSWMQLFPNAKLENLVAPSSDHFPILLDKTPVTRNNRVERTFKFENVWRVEEGVFDVVRDSWLGSAGSNVTNKLSNCAEDLKHWRWRLL