AlfalfaGEDB | MS.gene048088

M. sativa cultivar XinJiangDaYe / MS.gene048088

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene048088.t1	XP_024628877.1	61	359	28	1	1	247	1	359	4.60E-106	394.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene048088.t1	A0A2K3MZZ2	30.8	497	206	10	3	370	17	504	2.1e-52	216.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene024841	MS.gene048088	PPI
MS.gene51804	MS.gene048088	PPI
MS.gene048088	MS.gene08713	PPI
MS.gene87845	MS.gene048088	PPI
MS.gene36069	MS.gene048088	PPI
MS.gene048088	MS.gene09517	PPI
MS.gene30136	MS.gene048088	PPI
MS.gene95960	MS.gene048088	PPI
MS.gene61452	MS.gene048088	PPI
MS.gene008927	MS.gene048088	PPI
MS.gene016102	MS.gene048088	PPI
MS.gene46941	MS.gene048088	PPI
MS.gene045614	MS.gene048088	PPI
MS.gene96541	MS.gene048088	PPI
MS.gene049561	MS.gene048088	PPI
MS.gene000634	MS.gene048088	PPI
MS.gene009781	MS.gene048088	PPI
MS.gene30208	MS.gene048088	PPI
MS.gene028716	MS.gene048088	PPI
MS.gene025873	MS.gene048088	PPI
MS.gene012019	MS.gene048088	PPI
MS.gene06164	MS.gene048088	PPI
MS.gene048088	MS.gene44144	PPI
MS.gene013676	MS.gene048088	PPI
MS.gene05358	MS.gene048088	PPI
MS.gene95561	MS.gene048088	PPI
MS.gene074257	MS.gene048088	PPI
MS.gene065627	MS.gene048088	PPI
MS.gene010890	MS.gene048088	PPI
MS.gene018745	MS.gene048088	PPI
MS.gene000629	MS.gene048088	PPI
MS.gene65546	MS.gene048088	PPI
MS.gene09023	MS.gene048088	PPI
MS.gene059269	MS.gene048088	PPI
MS.gene000506	MS.gene048088	PPI
MS.gene032299	MS.gene048088	PPI
MS.gene05319	MS.gene048088	PPI
MS.gene038098	MS.gene048088	PPI
MS.gene56991	MS.gene048088	PPI
MS.gene60059	MS.gene048088	PPI
MS.gene85538	MS.gene048088	PPI
MS.gene062511	MS.gene048088	PPI
MS.gene048088	MS.gene37537	PPI
MS.gene22111	MS.gene048088	PPI
MS.gene048088	MS.gene069786	PPI
MS.gene28545	MS.gene048088	PPI
MS.gene28718	MS.gene048088	PPI
MS.gene048088	MS.gene025158	PPI
MS.gene055560	MS.gene048088	PPI
MS.gene048088	MS.gene27329	PPI
MS.gene29321	MS.gene048088	PPI
MS.gene048088	MS.gene41393	PPI
MS.gene34618	MS.gene048088	PPI
MS.gene064966	MS.gene048088	PPI
MS.gene048088	MS.gene016632	PPI
MS.gene048088	MS.gene018474	PPI
MS.gene002590	MS.gene048088	PPI
MS.gene003264	MS.gene048088	PPI
MS.gene048088	MS.gene96163	PPI
MS.gene40828	MS.gene048088	PPI
MS.gene43924	MS.gene048088	PPI
MS.gene046089	MS.gene048088	PPI
MS.gene77990	MS.gene048088	PPI
MS.gene036423	MS.gene048088	PPI
MS.gene013644	MS.gene048088	PPI
MS.gene80362	MS.gene048088	PPI
MS.gene72520	MS.gene048088	PPI
MS.gene013193	MS.gene048088	PPI
MS.gene048088	MS.gene61499	PPI
MS.gene35202	MS.gene048088	PPI
MS.gene019001	MS.gene048088	PPI
MS.gene63743	MS.gene048088	PPI
MS.gene048088	MS.gene81194	PPI
MS.gene048088	MS.gene060773	PPI
MS.gene63150	MS.gene048088	PPI
MS.gene48477	MS.gene048088	PPI
MS.gene045875	MS.gene048088	PPI
MS.gene048088	MS.gene038394	PPI
MS.gene54051	MS.gene048088	PPI
MS.gene038394	MS.gene048088	PPI
MS.gene008861	MS.gene048088	PPI
MS.gene024405	MS.gene048088	PPI
MS.gene048088	MS.gene24070	PPI
MS.gene73261	MS.gene048088	PPI
MS.gene012748	MS.gene048088	PPI
MS.gene024297	MS.gene048088	PPI
MS.gene83979	MS.gene048088	PPI
MS.gene45083	MS.gene048088	PPI
MS.gene92517	MS.gene048088	PPI
MS.gene048088	MS.gene055546	PPI
MS.gene85295	MS.gene048088	PPI
MS.gene057934	MS.gene048088	PPI
MS.gene47792	MS.gene048088	PPI
MS.gene46948	MS.gene048088	PPI
MS.gene98471	MS.gene048088	PPI
MS.gene028714	MS.gene048088	PPI
MS.gene049610	MS.gene048088	PPI
MS.gene038676	MS.gene048088	PPI
MS.gene060718	MS.gene048088	PPI
MS.gene025401	MS.gene048088	PPI
MS.gene93396	MS.gene048088	PPI
MS.gene05576	MS.gene048088	PPI
MS.gene048088	MS.gene068629	PPI
MS.gene52349	MS.gene048088	PPI
MS.gene05231	MS.gene048088	PPI
MS.gene048088	MS.gene009781	PPI
MS.gene98467	MS.gene048088	PPI
MS.gene46353	MS.gene048088	PPI
MS.gene010656	MS.gene048088	PPI
MS.gene42010	MS.gene048088	PPI
MS.gene037049	MS.gene048088	PPI
MS.gene048088	MS.gene048342	PPI
MS.gene40469	MS.gene048088	PPI
MS.gene041264	MS.gene048088	PPI
MS.gene41979	MS.gene048088	PPI
MS.gene024522	MS.gene048088	PPI
MS.gene048088	MS.gene21066	PPI
MS.gene64130	MS.gene048088	PPI
MS.gene048088	MS.gene98127	PPI
MS.gene050679	MS.gene048088	PPI
MS.gene048088	MS.gene003264	PPI
MS.gene20246	MS.gene048088	PPI
MS.gene055223	MS.gene048088	PPI
MS.gene016719	MS.gene048088	PPI
MS.gene010290	MS.gene048088	PPI
MS.gene071784	MS.gene048088	PPI
MS.gene053747	MS.gene048088	PPI
MS.gene048088	MS.gene008658	PPI
MS.gene061579	MS.gene048088	PPI
MS.gene76420	MS.gene048088	PPI
MS.gene071320	MS.gene048088	PPI
MS.gene65471	MS.gene048088	PPI
MS.gene048088	MS.gene49057	PPI
MS.gene061850	MS.gene048088	PPI
MS.gene26433	MS.gene048088	PPI
MS.gene34463	MS.gene048088	PPI
MS.gene048088	MS.gene86868	PPI
MS.gene22730	MS.gene048088	PPI
MS.gene073582	MS.gene048088	PPI
MS.gene042559	MS.gene048088	PPI
MS.gene058889	MS.gene048088	PPI
MS.gene98616	MS.gene048088	PPI
MS.gene53904	MS.gene048088	PPI
MS.gene08708	MS.gene048088	PPI
MS.gene69586	MS.gene048088	PPI
MS.gene042027	MS.gene048088	PPI
MS.gene85308	MS.gene048088	PPI
MS.gene69490	MS.gene048088	PPI
MS.gene015248	MS.gene048088	PPI
MS.gene012889	MS.gene048088	PPI
MS.gene048088	MS.gene012889	PPI
MS.gene34812	MS.gene048088	PPI
MS.gene44083	MS.gene048088	PPI
MS.gene04970	MS.gene048088	PPI
MS.gene08106	MS.gene048088	PPI
MS.gene51799	MS.gene048088	PPI
MS.gene58419	MS.gene048088	PPI
MS.gene067340	MS.gene048088	PPI
MS.gene048088	MS.gene54051	PPI
MS.gene96163	MS.gene048088	PPI
MS.gene08713	MS.gene048088	PPI
MS.gene23521	MS.gene048088	PPI
MS.gene29406	MS.gene048088	PPI
MS.gene86275	MS.gene048088	PPI
MS.gene048088	MS.gene010890	PPI
MS.gene98127	MS.gene048088	PPI
MS.gene05357	MS.gene048088	PPI
MS.gene87529	MS.gene048088	PPI
MS.gene004417	MS.gene048088	PPI
MS.gene04134	MS.gene048088	PPI
MS.gene062067	MS.gene048088	PPI
MS.gene57044	MS.gene048088	PPI
MS.gene048088	MS.gene060788	PPI
MS.gene054508	MS.gene048088	PPI
MS.gene89815	MS.gene048088	PPI
MS.gene41393	MS.gene048088	PPI
MS.gene39956	MS.gene048088	PPI
MS.gene017586	MS.gene048088	PPI
MS.gene98756	MS.gene048088	PPI
MS.gene048088	MS.gene027994	PPI
MS.gene71637	MS.gene048088	PPI
MS.gene048088	MS.gene022929	PPI
MS.gene042651	MS.gene048088	PPI
MS.gene09589	MS.gene048088	PPI
MS.gene048088	MS.gene007022	PPI
MS.gene048088	MS.gene69584	PPI
MS.gene057828	MS.gene048088	PPI
MS.gene034643	MS.gene048088	PPI
MS.gene044729	MS.gene048088	PPI
MS.gene66650	MS.gene048088	PPI
MS.gene048088	MS.gene069624	PPI
MS.gene037634	MS.gene048088	PPI
MS.gene048088	MS.gene61651	PPI
MS.gene24070	MS.gene048088	PPI
MS.gene71588	MS.gene048088	PPI
MS.gene04749	MS.gene048088	PPI
MS.gene048088	MS.gene88393	PPI
MS.gene048088	MS.gene054508	PPI
MS.gene027169	MS.gene048088	PPI
MS.gene039692	MS.gene048088	PPI
MS.gene81194	MS.gene048088	PPI
MS.gene42903	MS.gene048088	PPI
MS.gene81712	MS.gene048088	PPI
MS.gene026680	MS.gene048088	PPI
MS.gene021555	MS.gene048088	PPI
MS.gene048088	MS.gene65474	PPI
MS.gene048747	MS.gene048088	PPI
MS.gene69584	MS.gene048088	PPI
MS.gene22200	MS.gene048088	PPI
MS.gene019165	MS.gene048088	PPI
MS.gene048088	MS.gene032299	PPI
MS.gene055546	MS.gene048088	PPI
MS.gene26038	MS.gene048088	PPI
MS.gene49057	MS.gene048088	PPI
MS.gene048088	MS.gene08606	PPI
MS.gene94654	MS.gene048088	PPI
MS.gene073573	MS.gene048088	PPI
MS.gene048088	MS.gene000640	PPI
MS.gene031967	MS.gene048088	PPI
MS.gene053373	MS.gene048088	PPI
MS.gene048088	MS.gene98756	PPI
MS.gene02896	MS.gene048088	PPI
MS.gene063214	MS.gene048088	PPI
MS.gene55682	MS.gene048088	PPI
MS.gene97410	MS.gene048088	PPI
MS.gene83772	MS.gene048088	PPI
MS.gene32415	MS.gene048088	PPI
MS.gene009213	MS.gene048088	PPI
MS.gene048088	MS.gene74639	PPI
MS.gene048088	MS.gene071133	PPI
MS.gene048088	MS.gene60266	PPI
MS.gene060788	MS.gene048088	PPI
MS.gene035626	MS.gene048088	PPI
MS.gene048088	MS.gene62249	PPI
MS.gene63762	MS.gene048088	PPI
MS.gene65623	MS.gene048088	PPI
MS.gene27329	MS.gene048088	PPI
MS.gene71675	MS.gene048088	PPI
MS.gene048088	MS.gene37955	PPI
MS.gene019177	MS.gene048088	PPI
MS.gene69495	MS.gene048088	PPI
MS.gene049512	MS.gene048088	PPI
MS.gene048088	MS.gene92517	PPI
MS.gene038623	MS.gene048088	PPI
MS.gene048088	MS.gene84790	PPI
MS.gene048088	MS.gene044729	PPI
MS.gene55209	MS.gene048088	PPI
MS.gene032311	MS.gene048088	PPI
MS.gene64178	MS.gene048088	PPI
MS.gene048088	MS.gene60390	PPI
MS.gene030090	MS.gene048088	PPI
MS.gene96174	MS.gene048088	PPI
MS.gene048088	MS.gene039692	PPI
MS.gene018196	MS.gene048088	PPI
MS.gene86849	MS.gene048088	PPI
MS.gene50392	MS.gene048088	PPI
MS.gene072852	MS.gene048088	PPI
MS.gene57019	MS.gene048088	PPI
MS.gene048088	MS.gene77990	PPI
MS.gene048088	MS.gene062511	PPI
MS.gene03936	MS.gene048088	PPI
MS.gene021968	MS.gene048088	PPI
MS.gene048088	MS.gene057934	PPI
MS.gene048088	MS.gene024841	PPI
MS.gene43393	MS.gene048088	PPI
MS.gene34197	MS.gene048088	PPI
MS.gene048088	MS.gene46353	PPI
MS.gene008275	MS.gene048088	PPI
MS.gene038757	MS.gene048088	PPI
MS.gene005120	MS.gene048088	PPI
MS.gene016632	MS.gene048088	PPI
MS.gene048072	MS.gene048088	PPI
MS.gene060386	MS.gene048088	PPI
MS.gene048088	MS.gene09023	PPI
MS.gene05436	MS.gene048088	PPI
MS.gene048088	MS.gene025987	PPI
MS.gene059736	MS.gene048088	PPI
MS.gene70932	MS.gene048088	PPI
MS.gene048088	MS.gene95960	PPI
MS.gene048088	MS.gene043140	PPI
MS.gene047954	MS.gene048088	PPI
MS.gene35175	MS.gene048088	PPI
MS.gene048088	MS.gene03149	PPI
MS.gene025675	MS.gene048088	PPI
MS.gene069786	MS.gene048088	PPI
MS.gene054652	MS.gene048088	PPI
MS.gene021965	MS.gene048088	PPI
MS.gene055683	MS.gene048088	PPI
MS.gene042614	MS.gene048088	PPI
MS.gene048088	MS.gene29321	PPI
MS.gene41643	MS.gene048088	PPI
MS.gene013890	MS.gene048088	PPI
MS.gene26844	MS.gene048088	PPI
MS.gene060773	MS.gene048088	PPI
MS.gene021647	MS.gene048088	PPI
MS.gene048088	MS.gene025401	PPI
MS.gene66651	MS.gene048088	PPI
MS.gene96109	MS.gene048088	PPI
MS.gene048088	MS.gene015093	PPI
MS.gene048706	MS.gene048088	PPI
MS.gene051449	MS.gene048088	PPI
MS.gene048088	MS.gene24278	PPI
MS.gene048088	MS.gene000379	PPI
MS.gene048088	MS.gene34618	PPI
MS.gene048088	MS.gene59460	PPI
MS.gene009121	MS.gene048088	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene048088.t1	MTR_6g046587	63.846	130	40	1	259	388	114	236	6.76e-52	175
MS.gene048088.t1	MTR_1g051330	75.472	106	26	0	265	370	225	330	1.03e-50	181
MS.gene048088.t1	MTR_0042s0130	57.407	108	46	0	263	370	107	214	8.32e-38	139
MS.gene048088.t1	MTR_1g036720	57.407	108	46	0	1	108	1	108	1.40e-37	132
MS.gene048088.t1	MTR_1g100687	58.716	109	45	0	262	370	3	111	1.32e-36	133
MS.gene048088.t1	MTR_2g018005	50.806	124	61	0	247	370	74	197	1.51e-36	133
MS.gene048088.t1	MTR_4g020630	54.867	113	51	0	258	370	7	119	3.46e-36	138
MS.gene048088.t1	MTR_6g034715	49.515	103	52	0	271	373	4	106	2.94e-34	125
MS.gene048088.t1	MTR_6g034215	47.244	127	67	0	247	373	74	200	2.39e-33	127
MS.gene048088.t1	MTR_2g055450	52.830	106	50	0	265	370	126	231	2.57e-33	129
MS.gene048088.t1	MTR_8g470880	50.000	102	51	0	272	373	372	473	2.30e-30	122
MS.gene048088.t1	MTR_0010s0370	50.893	112	54	1	1	111	1	112	3.36e-30	115
MS.gene048088.t1	MTR_0010s0350	50.893	112	54	1	1	111	1	112	3.36e-30	115
MS.gene048088.t1	MTR_2g078880	47.525	101	53	0	248	348	52	152	9.97e-28	108
MS.gene048088.t1	MTR_6g009010	39.683	126	60	1	248	373	76	185	2.06e-25	104
MS.gene048088.t1	MTR_4g033730	46.000	100	54	0	269	368	39	138	9.53e-25	99.0
MS.gene048088.t1	MTR_0114s0080	50.633	79	39	0	292	370	20	98	1.11e-24	98.6
MS.gene048088.t1	MTR_4g044433	40.594	101	60	0	248	348	46	146	2.07e-23	95.5
MS.gene048088.t1	MTR_0093s0080	55.714	70	31	0	271	340	15	84	1.15e-21	90.5
MS.gene048088.t1	MTR_3g044860	60.000	65	26	0	306	370	3	67	2.36e-20	90.9
MS.gene048088.t1	MTR_2g064335	50.000	74	37	0	274	347	14	87	8.00e-18	84.0
MS.gene048088.t1	MTR_2g084625	39.583	96	56	1	273	366	12	107	1.81e-17	83.2
MS.gene048088.t1	MTR_8g019640	50.794	63	31	0	293	355	3	65	5.29e-16	79.3
MS.gene048088.t1	MTR_7g080340	57.143	56	24	0	280	335	4	59	1.95e-15	70.5
MS.gene048088.t1	MTR_8g446890	45.205	73	40	0	289	361	3	75	1.68e-14	70.9
MS.gene048088.t1	MTR_8g069750	43.421	76	43	0	247	322	46	121	4.41e-13	69.3
MS.gene048088.t1	MTR_8g463110	59.615	52	21	0	319	370	124	175	1.32e-12	69.7
MS.gene048088.t1	MTR_2g061500	30.000	100	70	0	9	108	11	110	1.41e-11	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 131 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGCCAAAACTCAGCTATTT+TGG	0.156844	4.4:+81798091	None:intergenic
CAGATGATGGAGCAAGATTC+TGG	0.217242	4.4:-81797575	MS.gene048088:CDS
CTTCCAATAATGTCACATTA+TGG	0.218243	4.4:+81797286	None:intergenic
ACTGATGGCCGAATTAAATT+AGG	0.218701	4.4:+81797342	None:intergenic
CCTATCAATGCGTGCTTCTT+TGG	0.228722	4.4:+81796460	None:intergenic
TCCCCATAATGTGACATTAT+TGG	0.247552	4.4:-81797289	MS.gene048088:CDS
GCTTCCGTTTCAACAATTCT+TGG	0.277998	4.4:-81796307	MS.gene048088:CDS
GTCATCATATGCCCTCTAAT+TGG	0.285417	4.4:+81798116	None:intergenic
TGTAGGGATGTTGAGGGATG+TGG	0.301724	4.4:+81797170	None:intergenic
CTTTCAGCAGGTGCGCCATC+TGG	0.305221	4.4:+81797930	None:intergenic
ATGATCCGGGTAACCGTAAA+AGG	0.321672	4.4:+81796721	None:intergenic
CGCCATCTGGGAGAGTATTA+AGG	0.324867	4.4:+81797943	None:intergenic
TTAATGTTGACCCCTCTTCC+AGG	0.331648	4.4:+81798068	None:intergenic
TTAAATTAGGATTCCTCAAC+AGG	0.347044	4.4:+81797355	None:intergenic
CATCCAAAATAGCTGAGTTT+TGG	0.347756	4.4:-81798094	MS.gene048088:CDS
TTCCAATAATGTCACATTAT+GGG	0.356708	4.4:+81797287	None:intergenic
CGACCCCATTGGCTTATTAG+AGG	0.357148	4.4:-81796575	MS.gene048088:CDS
CTTACTGACAAACCAATTAG+AGG	0.362902	4.4:-81798128	MS.gene048088:CDS
TCATCACTTAGATGCAAGTT+TGG	0.365389	4.4:+81798230	None:intergenic
TGGAAGAGGGGTCAACATTA+AGG	0.368550	4.4:-81798066	MS.gene048088:CDS
ATGGTAGACGGCGTGATTCT+TGG	0.372064	4.4:-81796700	MS.gene048088:CDS
TGTTTGTCGACACGTAATTC+AGG	0.380173	4.4:+81797549	None:intergenic
TGAGGAATCCTAATTTAATT+CGG	0.381900	4.4:-81797350	MS.gene048088:CDS
ATAAGCCAATGGGGTCGGTC+GGG	0.387617	4.4:+81796581	None:intergenic
GCAGAGGCTCTCGTTGGCTC+CGG	0.388303	4.4:-81797515	MS.gene048088:CDS
TGGCGTGCATGTCTCGATAA+TGG	0.394297	4.4:+81798009	None:intergenic
GATGACCCCTGGTGTATTAT+CGG	0.403174	4.4:-81796647	MS.gene048088:CDS
AATTTGAATGTGAAGAGGTT+TGG	0.411433	4.4:+81798035	None:intergenic
TGGTAGACGGCGTGATTCTT+GGG	0.411737	4.4:-81796699	MS.gene048088:CDS
GTAGGGATGTTGAGGGATGT+GGG	0.412400	4.4:+81797171	None:intergenic
CTAGTGTCTGCAGTATCATT+AGG	0.417748	4.4:+81798173	None:intergenic
GACACTAGTGCCAGCCTTGT+GGG	0.422604	4.4:-81798158	MS.gene048088:CDS
ACCACTCCTGGCCTTCCTCC+CGG	0.428167	4.4:+81797496	None:intergenic
TTGAAACGGAAGCTGTTATG+AGG	0.430680	4.4:+81796317	None:intergenic
CTTATCGATCTTCCTCTCAA+TGG	0.432427	4.4:-81796524	MS.gene048088:CDS
TAAGCCAATGGGGTCGGTCG+GGG	0.434320	4.4:+81796582	None:intergenic
AGATGATGGAGCAAGATTCT+GGG	0.435604	4.4:-81797574	MS.gene048088:CDS
TCATTAGGAAAACCCTCAAT+TGG	0.438159	4.4:+81798188	None:intergenic
TTGTTATGCGCAGGTGGTGT+AGG	0.443145	4.4:+81797153	None:intergenic
AAAACCTCTAATAAGCCAAT+GGG	0.443148	4.4:+81796571	None:intergenic
CCAAAGAAGCACGCATTGAT+AGG	0.444555	4.4:-81796460	MS.gene048088:intron
AGAACTTGAGATTCCAATTG+AGG	0.451851	4.4:-81798201	MS.gene048088:CDS
TAGACGGCGGTGACCACTCC+TGG	0.459570	4.4:+81797484	None:intergenic
CAGGTTGTTGTCGAAATACC+AGG	0.462966	4.4:+81797971	None:intergenic
AGCTCCCTCACCTGCTGAAA+CGG	0.463008	4.4:-81797391	MS.gene048088:CDS
TTGGCTCCGGGAGGAAGGCC+AGG	0.466612	4.4:-81797502	MS.gene048088:CDS
GCATGACTGTTACCGTTAGC+TGG	0.468618	4.4:+81797423	None:intergenic
TTATCGATCTTCCTCTCAAT+GGG	0.472071	4.4:-81796523	MS.gene048088:CDS
CAGAGGCTCTCGTTGGCTCC+GGG	0.479133	4.4:-81797514	MS.gene048088:CDS
TCTCGTTGGCTCCGGGAGGA+AGG	0.480967	4.4:-81797507	MS.gene048088:CDS
GCTAAATTGACCGTTTCAGC+AGG	0.486349	4.4:+81797381	None:intergenic
TGAGGGGCACGCCATGGAGG+TGG	0.486413	4.4:+81796335	None:intergenic
GAACTTGAGATTCCAATTGA+GGG	0.486829	4.4:-81798200	MS.gene048088:CDS
TTTAGTGTTCACAACGTCCA+TGG	0.495128	4.4:+81797116	None:intergenic
TTTCAGCAGGTGCGCCATCT+GGG	0.498288	4.4:+81797931	None:intergenic
TCAATTTAGCTGACCTGTTG+AGG	0.498716	4.4:-81797368	MS.gene048088:CDS
TCACGCCGTCTACCATGATC+CGG	0.498782	4.4:+81796707	None:intergenic
AATAAGCCAATGGGGTCGGT+CGG	0.500265	4.4:+81796580	None:intergenic
AGACGCCAAGGACCGTTGAC+AGG	0.506892	4.4:+81796749	None:intergenic
AGGACCCTGTCAACGGTCCT+TGG	0.508701	4.4:-81796754	MS.gene048088:CDS
CTTGCATCTAAGTGATGAAG+AGG	0.517251	4.4:-81798225	MS.gene048088:CDS
ATGCTCTTGAACCAAGTGAA+TGG	0.519001	4.4:+81796497	None:intergenic
TGGATCAACTGAAACGTCTC+CGG	0.520796	4.4:+81797443	None:intergenic
GGAGAGTATTAAGGATCAGC+AGG	0.529050	4.4:+81797952	None:intergenic
TCAGCCAAGAATTGTTGAAA+CGG	0.531542	4.4:+81796303	None:intergenic
GGGGCCCCGACCGACCCCAT+TGG	0.533394	4.4:-81796586	MS.gene048088:CDS
AAGAAATCTTCCCACAAGGC+TGG	0.535154	4.4:+81798148	None:intergenic
TCCAATAATGTCACATTATG+GGG	0.536540	4.4:+81797288	None:intergenic
GACTGAGTGTTGTTATGCGC+AGG	0.538388	4.4:+81797144	None:intergenic
TTACTGACAAACCAATTAGA+GGG	0.539577	4.4:-81798127	MS.gene048088:CDS
ATAGTCAGTCTGATGACCCC+TGG	0.540232	4.4:-81796658	MS.gene048088:CDS
TGCAGCTTGATCCACCTCCA+TGG	0.541270	4.4:-81796346	MS.gene048088:intron
GAAAACCTCTAATAAGCCAA+TGG	0.541947	4.4:+81796570	None:intergenic
TGCTGTTTAATGCTTACTGA+TGG	0.545392	4.4:+81797327	None:intergenic
TGTAGTGGTACACTTTCAGC+AGG	0.549431	4.4:+81797918	None:intergenic
GGAAGAATTTGAATGTGAAG+AGG	0.549642	4.4:+81798030	None:intergenic
TAATGTGACATTATTGGAAG+AGG	0.554149	4.4:-81797283	MS.gene048088:CDS
CTCTAATAAGCCAATGGGGT+CGG	0.556799	4.4:+81796576	None:intergenic
AAACAGAAGAACGAAGGCAG+AGG	0.557901	4.4:-81797531	MS.gene048088:CDS
TGTTATGCGCAGGTGGTGTA+GGG	0.561992	4.4:+81797154	None:intergenic
CTGTTATGAGGGGCACGCCA+TGG	0.562108	4.4:+81796329	None:intergenic
TTAGTGTTCACAACGTCCAT+GGG	0.562308	4.4:+81797117	None:intergenic
CATTGAGAGGAAGATCGATA+AGG	0.564711	4.4:+81796525	None:intergenic
TCCGGGAGGAAGGCCAGGAG+TGG	0.568187	4.4:-81797497	MS.gene048088:CDS
TTATTCACAGTAACACAAAA+CGG	0.569681	4.4:-81797248	MS.gene048088:CDS
AGGTGGTGTAGGGATGTTGA+GGG	0.573689	4.4:+81797164	None:intergenic
TCAATGGGTATCCATTCACT+TGG	0.575315	4.4:-81796508	MS.gene048088:CDS
GATGATGGAGCAAGATTCTG+GGG	0.576618	4.4:-81797573	MS.gene048088:CDS
TAGGGATGTTGAGGGATGTG+GGG	0.579285	4.4:+81797172	None:intergenic
GAAGTCTCCGATAATACACC+AGG	0.579399	4.4:+81796640	None:intergenic
ATTGACCGTTTCAGCAGGTG+AGG	0.582012	4.4:+81797386	None:intergenic
CAAGTTTGGCAGTGATGTCA+TGG	0.582297	4.4:+81798244	None:intergenic
GTCTTTGATACGGAGTTAGA+CGG	0.584330	4.4:+81797468	None:intergenic
TCACGCTCAGACTTGAATGA+AGG	0.587236	4.4:-81797225	MS.gene048088:CDS
AGACACTAGTGCCAGCCTTG+TGG	0.592106	4.4:-81798159	MS.gene048088:CDS
CAGGTGGTGTAGGGATGTTG+AGG	0.593323	4.4:+81797163	None:intergenic
AACTCCGTATCAAAGACTGC+CGG	0.596557	4.4:-81797462	MS.gene048088:CDS
TGAAACGGAAGCTGTTATGA+GGG	0.596858	4.4:+81796318	None:intergenic
TCCATTCAGGACCCTGTCAA+CGG	0.599618	4.4:-81796761	MS.gene048088:intron
CACGCCGTCTACCATGATCC+GGG	0.601857	4.4:+81796708	None:intergenic
TTGACCGTTTCAGCAGGTGA+GGG	0.603648	4.4:+81797387	None:intergenic
ACGAAGGCAGAGGCTCTCGT+TGG	0.606347	4.4:-81797521	MS.gene048088:CDS
GTCTCCGGCAGTCTTTGATA+CGG	0.611150	4.4:+81797458	None:intergenic
ATCCTTAATACTCTCCCAGA+TGG	0.615323	4.4:-81797945	MS.gene048088:CDS
CTATCTCCTTCCGACAAACG+AGG	0.617973	4.4:-81796608	MS.gene048088:CDS
ACATTATGGGGAGATAAATG+AGG	0.619257	4.4:+81797300	None:intergenic
GACGCCAAGGACCGTTGACA+GGG	0.620469	4.4:+81796750	None:intergenic
CATTATGGGGAGATAAATGA+GGG	0.622308	4.4:+81797301	None:intergenic
TTCACTTGGTTCAAGAGCAT+AGG	0.625497	4.4:-81796494	MS.gene048088:CDS
GTTTCAGTTGATCCAGCTAA+CGG	0.626018	4.4:-81797435	MS.gene048088:CDS
CAACACTCAGTCAACACCCA+TGG	0.626429	4.4:-81797133	MS.gene048088:CDS
CAGTAAGAAATCTTCCCACA+AGG	0.626909	4.4:+81798144	None:intergenic
TATCTCCTTCCGACAAACGA+GGG	0.627918	4.4:-81796607	MS.gene048088:CDS
TAAAAGGCAGTGAGACGCCA+AGG	0.630350	4.4:+81796737	None:intergenic
GTGAATGGATACCCATTGAG+AGG	0.635937	4.4:+81796512	None:intergenic
AGGCTCTCGTTGGCTCCGGG+AGG	0.643567	4.4:-81797511	MS.gene048088:CDS
ATCTCCTTCCGACAAACGAG+GGG	0.653560	4.4:-81796606	MS.gene048088:CDS
TTATGAGGGGCACGCCATGG+AGG	0.654878	4.4:+81796332	None:intergenic
TGAGTGTTGTTATGCGCAGG+TGG	0.658508	4.4:+81797147	None:intergenic
GTCGACAAACAGAAGAACGA+AGG	0.676512	4.4:-81797537	MS.gene048088:CDS
GAAACGGAAGCTGTTATGAG+GGG	0.696784	4.4:+81796319	None:intergenic
AGGTTGTTGTCGAAATACCA+GGG	0.714795	4.4:+81797972	None:intergenic
TCTCCTTCCGACAAACGAGG+GGG	0.716926	4.4:-81796605	MS.gene048088:CDS
AAGTCTCCGATAATACACCA+GGG	0.717431	4.4:+81796641	None:intergenic
TTATGGGGAGATAAATGAGG+GGG	0.720712	4.4:+81797303	None:intergenic
GTTACCCGGATCATGGTAGA+CGG	0.730001	4.4:-81796712	MS.gene048088:CDS
ATGATGGAGCAAGATTCTGG+GGG	0.734554	4.4:-81797572	MS.gene048088:CDS
AAACCTCTAATAAGCCAATG+GGG	0.748894	4.4:+81796572	None:intergenic
AGTCTCCGATAATACACCAG+GGG	0.753819	4.4:+81796642	None:intergenic
TTTGATACGGAGTTAGACGG+CGG	0.766772	4.4:+81797471	None:intergenic
ATTATGGGGAGATAAATGAG+GGG	0.777929	4.4:+81797302	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGTAATAATAATAAAATTTC+TGG	-	chr4.4:81797628-81797647	MS.gene048088:intron	10.0%
!!	GTGTTGTGAATAATTAATTA+TGG	+	chr4.4:81797752-81797771	None:intergenic	20.0%
!!	TATTACATAAAGTCTCAATA+AGG	+	chr4.4:81797615-81797634	None:intergenic	20.0%
!	CTTTATAAATATGTCCATTC+AGG	-	chr4.4:81797771-81797790	MS.gene048088:intron	25.0%
!	TGAGGAATCCTAATTTAATT+CGG	-	chr4.4:81797195-81797214	MS.gene048088:CDS	25.0%
!	TTATTCACAGTAACACAAAA+CGG	-	chr4.4:81797297-81797316	MS.gene048088:CDS	25.0%
!	TTCCAATAATGTCACATTAT+GGG	+	chr4.4:81797261-81797280	None:intergenic	25.0%
!!	GGAAATTTTTGTTACTATTG+TGG	-	chr4.4:81796897-81796916	MS.gene048088:intron	25.0%
	AAAACCTCTAATAAGCCAAT+GGG	+	chr4.4:81797977-81797996	None:intergenic	30.0%
	AAATTCAAATACGAACGCTT+AGG	-	chr4.4:81796876-81796895	MS.gene048088:intron	30.0%
	AATTTGAATGTGAAGAGGTT+TGG	+	chr4.4:81796513-81796532	None:intergenic	30.0%
	CTTCCAATAATGTCACATTA+TGG	+	chr4.4:81797262-81797281	None:intergenic	30.0%
	TAATGTGACATTATTGGAAG+AGG	-	chr4.4:81797262-81797281	MS.gene048088:CDS	30.0%
	TCAATAAGGATAACAATGTC+CGG	+	chr4.4:81797601-81797620	None:intergenic	30.0%
	TCCAATAATGTCACATTATG+GGG	+	chr4.4:81797260-81797279	None:intergenic	30.0%
	TTAAATTAGGATTCCTCAAC+AGG	+	chr4.4:81797193-81797212	None:intergenic	30.0%
	TTACTGACAAACCAATTAGA+GGG	-	chr4.4:81796418-81796437	MS.gene048088:intron	30.0%
!!!	AACTAGTGTGCCTTTTTTAT+CGG	-	chr4.4:81797460-81797479	MS.gene048088:CDS	30.0%
	AAACCTCTAATAAGCCAATG+GGG	+	chr4.4:81797976-81797995	None:intergenic	35.0%
	ACATTATGGGGAGATAAATG+AGG	+	chr4.4:81797248-81797267	None:intergenic	35.0%
	ACTGATGGCCGAATTAAATT+AGG	+	chr4.4:81797206-81797225	None:intergenic	35.0%
	AGAACTTGAGATTCCAATTG+AGG	-	chr4.4:81796344-81796363	MS.gene048088:CDS	35.0%
	ATGTCAACAAACCACTCAAA+AGG	-	chr4.4:81796811-81796830	MS.gene048088:intron	35.0%
	ATTATGGGGAGATAAATGAG+GGG	+	chr4.4:81797246-81797265	None:intergenic	35.0%
	CAACACATGAATACGCATAT+AGG	+	chr4.4:81796787-81796806	None:intergenic	35.0%
	CATTATGGGGAGATAAATGA+GGG	+	chr4.4:81797247-81797266	None:intergenic	35.0%
	CCACAGGAATATCATGAATT+CGG	+	chr4.4:81796671-81796690	None:intergenic	35.0%
	CGAATTCATGATATTCCTGT+GGG	-	chr4.4:81796669-81796688	MS.gene048088:CDS	35.0%
	CTTACTGACAAACCAATTAG+AGG	-	chr4.4:81796417-81796436	MS.gene048088:intron	35.0%
	GAAAACCTCTAATAAGCCAA+TGG	+	chr4.4:81797978-81797997	None:intergenic	35.0%
	GAACTTGAGATTCCAATTGA+GGG	-	chr4.4:81796345-81796364	MS.gene048088:intron	35.0%
	GAATTTCATTGGGGAATTTC+TGG	-	chr4.4:81796725-81796744	MS.gene048088:CDS	35.0%
	GGAAGAATTTGAATGTGAAG+AGG	+	chr4.4:81796518-81796537	None:intergenic	35.0%
	GGATTTATGACAGAAAGAGT+AGG	-	chr4.4:81796690-81796709	MS.gene048088:CDS	35.0%
	TCAGCCAAGAATTGTTGAAA+CGG	+	chr4.4:81798245-81798264	None:intergenic	35.0%
	TCATCACTTAGATGCAAGTT+TGG	+	chr4.4:81796318-81796337	None:intergenic	35.0%
	TCATTAGGAAAACCCTCAAT+TGG	+	chr4.4:81796360-81796379	None:intergenic	35.0%
	TCCCCATAATGTGACATTAT+TGG	-	chr4.4:81797256-81797275	MS.gene048088:CDS	35.0%
	TTATCGATCTTCCTCTCAAT+GGG	-	chr4.4:81798022-81798041	MS.gene048088:CDS	35.0%
!	ATGCCAAAACTCAGCTATTT+TGG	+	chr4.4:81796457-81796476	None:intergenic	35.0%
!	ATTTTCTTCTGCCTTTTGAG+TGG	+	chr4.4:81796825-81796844	None:intergenic	35.0%
!	CATCCAAAATAGCTGAGTTT+TGG	-	chr4.4:81796451-81796470	MS.gene048088:intron	35.0%
!	TAAAAAAGGCACACTAGTTG+AGG	+	chr4.4:81797459-81797478	None:intergenic	35.0%
!	TCTGGTTTGAAGTATTCGAT+TGG	-	chr4.4:81797646-81797665	MS.gene048088:intron	35.0%
!	TGCTGTTTAATGCTTACTGA+TGG	+	chr4.4:81797221-81797240	None:intergenic	35.0%
	AAAGACCTGGGGAATTTCAT+TGG	-	chr4.4:81796714-81796733	MS.gene048088:CDS	40.0%
	AAAGAGTAGGAAAAGACCTG+GGG	-	chr4.4:81796703-81796722	MS.gene048088:CDS	40.0%
	AAGACCTGGGGAATTTCATT+GGG	-	chr4.4:81796715-81796734	MS.gene048088:CDS	40.0%
	AAGTCTCCGATAATACACCA+GGG	+	chr4.4:81797907-81797926	None:intergenic	40.0%
	ACGGACAAGGTCTTTAATAC+AGG	+	chr4.4:81797569-81797588	None:intergenic	40.0%
	ACTACAATCAGTTCCGTTCT+GGG	-	chr4.4:81796644-81796663	MS.gene048088:CDS	40.0%
	ACTACGACCAATACAGTCTA+CGG	+	chr4.4:81797689-81797708	None:intergenic	40.0%
	AGAAAGAGTAGGAAAAGACC+TGG	-	chr4.4:81796701-81796720	MS.gene048088:CDS	40.0%
	AGAAGAAAATCAAGCGTCCA+GGG	-	chr4.4:81796835-81796854	MS.gene048088:intron	40.0%
	AGGTTGTTGTCGAAATACCA+GGG	+	chr4.4:81796576-81796595	None:intergenic	40.0%
	ATCCTTAATACTCTCCCAGA+TGG	-	chr4.4:81796600-81796619	MS.gene048088:CDS	40.0%
	ATGCTCTTGAACCAAGTGAA+TGG	+	chr4.4:81798051-81798070	None:intergenic	40.0%
	CAATACAGTCTACGGAGAAA+TGG	+	chr4.4:81797681-81797700	None:intergenic	40.0%
	CAATGTCCGGTTTATAGACA+CGG	+	chr4.4:81797588-81797607	None:intergenic	40.0%
	CAGTAAGAAATCTTCCCACA+AGG	+	chr4.4:81796404-81796423	None:intergenic	40.0%
	CATTGAGAGGAAGATCGATA+AGG	+	chr4.4:81798023-81798042	None:intergenic	40.0%
	CATTTCTCCGTAGACTGTAT+TGG	-	chr4.4:81797679-81797698	MS.gene048088:intron	40.0%
	CCGAATTCATGATATTCCTG+TGG	-	chr4.4:81796668-81796687	MS.gene048088:CDS	40.0%
	CGGACAAGGTCTTTAATACA+GGG	+	chr4.4:81797568-81797587	None:intergenic	40.0%
	CTAGTGTCTGCAGTATCATT+AGG	+	chr4.4:81796375-81796394	None:intergenic	40.0%
	CTGGAGTATGACGTCAAAAA+CGG	-	chr4.4:81796744-81796763	MS.gene048088:CDS	40.0%
	CTTATCGATCTTCCTCTCAA+TGG	-	chr4.4:81798021-81798040	MS.gene048088:CDS	40.0%
	CTTGCATCTAAGTGATGAAG+AGG	-	chr4.4:81796320-81796339	MS.gene048088:CDS	40.0%
	CTTTCTGTCATAAATCCCAC+AGG	+	chr4.4:81796687-81796706	None:intergenic	40.0%
	GAAAGAGTAGGAAAAGACCT+GGG	-	chr4.4:81796702-81796721	MS.gene048088:CDS	40.0%
	GCTTCCGTTTCAACAATTCT+TGG	-	chr4.4:81798238-81798257	MS.gene048088:CDS	40.0%
	GTCATCATATGCCCTCTAAT+TGG	+	chr4.4:81796432-81796451	None:intergenic	40.0%
	GTCTTTGATACGGAGTTAGA+CGG	+	chr4.4:81797080-81797099	None:intergenic	40.0%
	GTTCCAGGCTATAACATTCA+TGG	+	chr4.4:81797515-81797534	None:intergenic	40.0%
	GTTTCAGTTGATCCAGCTAA+CGG	-	chr4.4:81797110-81797129	MS.gene048088:intron	40.0%
	TCAATGGGTATCCATTCACT+TGG	-	chr4.4:81798037-81798056	MS.gene048088:CDS	40.0%
	TCAATTTAGCTGACCTGTTG+AGG	-	chr4.4:81797177-81797196	MS.gene048088:CDS	40.0%
	TGAAACGGAAGCTGTTATGA+GGG	+	chr4.4:81798230-81798249	None:intergenic	40.0%
	TGCAGAATTTCGCCATAGAA+CGG	+	chr4.4:81797722-81797741	None:intergenic	40.0%
	TGTTACTATTGTGGAGCTCT+TGG	-	chr4.4:81796906-81796925	MS.gene048088:intron	40.0%
	TGTTTGTCGACACGTAATTC+AGG	+	chr4.4:81796999-81797018	None:intergenic	40.0%
	TTAGTGTTCACAACGTCCAT+GGG	+	chr4.4:81797431-81797450	None:intergenic	40.0%
	TTATGGGGAGATAAATGAGG+GGG	+	chr4.4:81797245-81797264	None:intergenic	40.0%
	TTGAAACGGAAGCTGTTATG+AGG	+	chr4.4:81798231-81798250	None:intergenic	40.0%
	TTTAGTGTTCACAACGTCCA+TGG	+	chr4.4:81797432-81797451	None:intergenic	40.0%
!	TTCACTTGGTTCAAGAGCAT+AGG	-	chr4.4:81798051-81798070	MS.gene048088:CDS	40.0%
!!	AGATGATGGAGCAAGATTCT+GGG	-	chr4.4:81796971-81796990	MS.gene048088:intron	40.0%
!!	TATTCTGTCGACTCAGATGA+TGG	-	chr4.4:81796957-81796976	MS.gene048088:intron	40.0%
!!!	AATACCAGGGACCTTTTTTG+AGG	+	chr4.4:81796563-81796582	None:intergenic	40.0%
	AAACAGAAGAACGAAGGCAG+AGG	-	chr4.4:81797014-81797033	MS.gene048088:intron	45.0%
	AACTCCGTATCAAAGACTGC+CGG	-	chr4.4:81797083-81797102	MS.gene048088:intron	45.0%
	AAGAAAATCAAGCGTCCAGG+GGG	-	chr4.4:81796837-81796856	MS.gene048088:intron	45.0%
	AAGAAATCTTCCCACAAGGC+TGG	+	chr4.4:81796400-81796419	None:intergenic	45.0%
	AGACCTGGGGAATTTCATTG+GGG	-	chr4.4:81796716-81796735	MS.gene048088:CDS	45.0%
	AGTCTCCGATAATACACCAG+GGG	+	chr4.4:81797906-81797925	None:intergenic	45.0%
	ATGATCCGGGTAACCGTAAA+AGG	+	chr4.4:81797827-81797846	None:intergenic	45.0%
	ATGCACGCCATCCTCAAAAA+AGG	-	chr4.4:81796549-81796568	MS.gene048088:CDS	45.0%
	ATTCCCCAATGAAATTCCCC+AGG	+	chr4.4:81796722-81796741	None:intergenic	45.0%
	CACTACAATCAGTTCCGTTC+TGG	-	chr4.4:81796643-81796662	MS.gene048088:CDS	45.0%
	CAGAACGGAACTGATTGTAG+TGG	+	chr4.4:81796645-81796664	None:intergenic	45.0%
	CAGAAGAAAATCAAGCGTCC+AGG	-	chr4.4:81796834-81796853	MS.gene048088:intron	45.0%
	CAGGTTGTTGTCGAAATACC+AGG	+	chr4.4:81796577-81796596	None:intergenic	45.0%
	CCTATCAATGCGTGCTTCTT+TGG	+	chr4.4:81798088-81798107	None:intergenic	45.0%
	CCTTGTCCGTGTCTATAAAC+CGG	-	chr4.4:81797579-81797598	MS.gene048088:intron	45.0%
	CTCTAATAAGCCAATGGGGT+CGG	+	chr4.4:81797972-81797991	None:intergenic	45.0%
	GAAACGGAAGCTGTTATGAG+GGG	+	chr4.4:81798229-81798248	None:intergenic	45.0%
	GAAGAAAATCAAGCGTCCAG+GGG	-	chr4.4:81796836-81796855	MS.gene048088:intron	45.0%
	GAAGTCTCCGATAATACACC+AGG	+	chr4.4:81797908-81797927	None:intergenic	45.0%
	GAGCCATGAATGTTATAGCC+TGG	-	chr4.4:81797509-81797528	MS.gene048088:CDS	45.0%
	GATGACCCCTGGTGTATTAT+CGG	-	chr4.4:81797898-81797917	MS.gene048088:intron	45.0%
	GCTAAATTGACCGTTTCAGC+AGG	+	chr4.4:81797167-81797186	None:intergenic	45.0%
	GCTATAACATTCATGGCTCC+CGG	+	chr4.4:81797508-81797527	None:intergenic	45.0%
	GTCGACAAACAGAAGAACGA+AGG	-	chr4.4:81797008-81797027	MS.gene048088:intron	45.0%
	GTGAATGGATACCCATTGAG+AGG	+	chr4.4:81798036-81798055	None:intergenic	45.0%
	TATCTCCTTCCGACAAACGA+GGG	-	chr4.4:81797938-81797957	MS.gene048088:CDS	45.0%
	TCACGCTCAGACTTGAATGA+AGG	-	chr4.4:81797320-81797339	MS.gene048088:CDS	45.0%
	TCATGAATTCGGACCCAGAA+CGG	+	chr4.4:81796660-81796679	None:intergenic	45.0%
	TGGAAGAGGGGTCAACATTA+AGG	-	chr4.4:81796479-81796498	MS.gene048088:CDS	45.0%
	TGGATCAACTGAAACGTCTC+CGG	+	chr4.4:81797105-81797124	None:intergenic	45.0%
	TGTAGTGGTACACTTTCAGC+AGG	+	chr4.4:81796630-81796649	None:intergenic	45.0%
	TTAATGTTGACCCCTCTTCC+AGG	+	chr4.4:81796480-81796499	None:intergenic	45.0%
	TTTGATACGGAGTTAGACGG+CGG	+	chr4.4:81797077-81797096	None:intergenic	45.0%
!	ATGATGGAGCAAGATTCTGG+GGG	-	chr4.4:81796973-81796992	MS.gene048088:intron	45.0%
!	CCAAAGAAGCACGCATTGAT+AGG	-	chr4.4:81798085-81798104	MS.gene048088:CDS	45.0%
!	GTAGACTGTATTGGTCGTAG+TGG	-	chr4.4:81797688-81797707	MS.gene048088:intron	45.0%
!	TTTTACGGTTACCCGGATCA+TGG	-	chr4.4:81797826-81797845	MS.gene048088:intron	45.0%
!!	AGTTTTGGCATCCTGGAAGA+GGG	-	chr4.4:81796466-81796485	MS.gene048088:CDS	45.0%
!!	ATAGCTGAGTTTTGGCATCC+TGG	-	chr4.4:81796459-81796478	MS.gene048088:intron	45.0%
!!	CAGATGATGGAGCAAGATTC+TGG	-	chr4.4:81796970-81796989	MS.gene048088:intron	45.0%
!!	GATGATGGAGCAAGATTCTG+GGG	-	chr4.4:81796972-81796991	MS.gene048088:intron	45.0%
!!	GGAGAGTATTAAGGATCAGC+AGG	+	chr4.4:81796596-81796615	None:intergenic	45.0%
	AATAAGCCAATGGGGTCGGT+CGG	+	chr4.4:81797968-81797987	None:intergenic	50.0%
	AGCTACTAGAGTTTGCAGCG+TGG	+	chr4.4:81798151-81798170	None:intergenic	50.0%
	AGGTGGTGTAGGGATGTTGA+GGG	+	chr4.4:81797384-81797403	None:intergenic	50.0%
	ATAGTCAGTCTGATGACCCC+TGG	-	chr4.4:81797887-81797906	MS.gene048088:intron	50.0%
	ATCTCCTTCCGACAAACGAG+GGG	-	chr4.4:81797939-81797958	MS.gene048088:CDS	50.0%
	ATGAGGGAACAATTCCAGCC+AGG	+	chr4.4:81798127-81798146	None:intergenic	50.0%
	ATGGTAGACGGCGTGATTCT+TGG	-	chr4.4:81797845-81797864	MS.gene048088:intron	50.0%
	ATTGACCGTTTCAGCAGGTG+AGG	+	chr4.4:81797162-81797181	None:intergenic	50.0%
	CAACACTCAGTCAACACCCA+TGG	-	chr4.4:81797412-81797431	MS.gene048088:CDS	50.0%
	CCATCCTCAAAAAAGGTCCC+TGG	-	chr4.4:81796556-81796575	MS.gene048088:CDS	50.0%
	CCGGTTTATAGACACGGACA+AGG	+	chr4.4:81797582-81797601	None:intergenic	50.0%
	CTATCTCCTTCCGACAAACG+AGG	-	chr4.4:81797937-81797956	MS.gene048088:CDS	50.0%
	GCATGACTGTTACCGTTAGC+TGG	+	chr4.4:81797125-81797144	None:intergenic	50.0%
	GGATCAAGCTGCAAGAGAAG+CGG	+	chr4.4:81798192-81798211	None:intergenic	50.0%
	GTAGGGATGTTGAGGGATGT+GGG	+	chr4.4:81797377-81797396	None:intergenic	50.0%
	GTCTCCGGCAGTCTTTGATA+CGG	+	chr4.4:81797090-81797109	None:intergenic	50.0%
	GTTACCCGGATCATGGTAGA+CGG	-	chr4.4:81797833-81797852	MS.gene048088:intron	50.0%
	GTTATAGCCTGGAACTGTCG+TGG	-	chr4.4:81797520-81797539	MS.gene048088:CDS	50.0%
	TAAAAGGCAGTGAGACGCCA+AGG	+	chr4.4:81797811-81797830	None:intergenic	50.0%
	TAGGGATGTTGAGGGATGTG+GGG	+	chr4.4:81797376-81797395	None:intergenic	50.0%
	TCCATTCAGGACCCTGTCAA+CGG	-	chr4.4:81797784-81797803	MS.gene048088:intron	50.0%
	TGAGGGAACAATTCCAGCCA+GGG	+	chr4.4:81798126-81798145	None:intergenic	50.0%
	TGGCGTGCATGTCTCGATAA+TGG	+	chr4.4:81796539-81796558	None:intergenic	50.0%
	TGGTAGACGGCGTGATTCTT+GGG	-	chr4.4:81797846-81797865	MS.gene048088:intron	50.0%
	TGTAGGGATGTTGAGGGATG+TGG	+	chr4.4:81797378-81797397	None:intergenic	50.0%
	TGTTATGCGCAGGTGGTGTA+GGG	+	chr4.4:81797394-81797413	None:intergenic	50.0%
	TTGACCGTTTCAGCAGGTGA+GGG	+	chr4.4:81797161-81797180	None:intergenic	50.0%
	TTGTTATGCGCAGGTGGTGT+AGG	+	chr4.4:81797395-81797414	None:intergenic	50.0%
!	CACTGCCTTTTACGGTTACC+CGG	-	chr4.4:81797819-81797838	MS.gene048088:intron	50.0%
!	GACTGAGTGTTGTTATGCGC+AGG	+	chr4.4:81797404-81797423	None:intergenic	50.0%
!	GACTGTATTGGTCGTAGTGG+CGG	-	chr4.4:81797691-81797710	MS.gene048088:intron	50.0%
!	TGAGTGTTGTTATGCGCAGG+TGG	+	chr4.4:81797401-81797420	None:intergenic	50.0%
!	TGGCGTCTCACTGCCTTTTA+CGG	-	chr4.4:81797811-81797830	MS.gene048088:intron	50.0%
!!	CGACCCCATTGGCTTATTAG+AGG	-	chr4.4:81797970-81797989	MS.gene048088:CDS	50.0%
!!	CGCCATCTGGGAGAGTATTA+AGG	+	chr4.4:81796605-81796624	None:intergenic	50.0%
!!	GAGTTTTGGCATCCTGGAAG+AGG	-	chr4.4:81796465-81796484	MS.gene048088:CDS	50.0%
!!	GTTTTGGCATCCTGGAAGAG+GGG	-	chr4.4:81796467-81796486	MS.gene048088:CDS	50.0%
!!!	CCAGGGACCTTTTTTGAGGA+TGG	+	chr4.4:81796559-81796578	None:intergenic	50.0%
	ACAGTTTGCGTGTTACCCCC+TGG	+	chr4.4:81796855-81796874	None:intergenic	55.0%
	ACCGTTGACAGGGTCCTGAA+TGG	+	chr4.4:81797788-81797807	None:intergenic	55.0%
	AGACACTAGTGCCAGCCTTG+TGG	-	chr4.4:81796386-81796405	MS.gene048088:intron	55.0%
	AGAGTTTGCAGCGTGGCATG+AGG	+	chr4.4:81798144-81798163	None:intergenic	55.0%
	AGCGGTGTGTGGTCAGACAT+AGG	+	chr4.4:81798174-81798193	None:intergenic	55.0%
	AGCTCCCTCACCTGCTGAAA+CGG	-	chr4.4:81797154-81797173	MS.gene048088:CDS	55.0%
	AGGGAACAATTCCAGCCAGG+GGG	+	chr4.4:81798124-81798143	None:intergenic	55.0%
	ATAAGCCAATGGGGTCGGTC+GGG	+	chr4.4:81797967-81797986	None:intergenic	55.0%
	CAGGTGGTGTAGGGATGTTG+AGG	+	chr4.4:81797385-81797404	None:intergenic	55.0%
	GAACTGCCTTGACATTGCCG+AGG	+	chr4.4:81797546-81797565	None:intergenic	55.0%
	GAGGGAACAATTCCAGCCAG+GGG	+	chr4.4:81798125-81798144	None:intergenic	55.0%
	GAGTTTGCAGCGTGGCATGA+GGG	+	chr4.4:81798143-81798162	None:intergenic	55.0%
	TAACATTCATGGCTCCCGGC+AGG	+	chr4.4:81797504-81797523	None:intergenic	55.0%
	TCACGCCGTCTACCATGATC+CGG	+	chr4.4:81797841-81797860	None:intergenic	55.0%
	TCTCCTTCCGACAAACGAGG+GGG	-	chr4.4:81797940-81797959	MS.gene048088:CDS	55.0%
	TGCAGCTTGATCCACCTCCA+TGG	-	chr4.4:81798199-81798218	MS.gene048088:CDS	55.0%
	TTTCAGCAGGTGCGCCATCT+GGG	+	chr4.4:81796617-81796636	None:intergenic	55.0%
!	CCAGGCGCTGCCGATAAAAA+AGG	+	chr4.4:81797473-81797492	None:intergenic	55.0%
!	GACACTAGTGCCAGCCTTGT+GGG	-	chr4.4:81796387-81796406	MS.gene048088:intron	55.0%
!!!	CCTTTTTTATCGGCAGCGCC+TGG	-	chr4.4:81797470-81797489	MS.gene048088:CDS	55.0%
	ACGAAGGCAGAGGCTCTCGT+TGG	-	chr4.4:81797024-81797043	MS.gene048088:intron	60.0%
	AGACGCCAAGGACCGTTGAC+AGG	+	chr4.4:81797799-81797818	None:intergenic	60.0%
	AGGACCCTGTCAACGGTCCT+TGG	-	chr4.4:81797791-81797810	MS.gene048088:intron	60.0%
	CACGCCGTCTACCATGATCC+GGG	+	chr4.4:81797840-81797859	None:intergenic	60.0%
	CTTTCAGCAGGTGCGCCATC+TGG	+	chr4.4:81796618-81796637	None:intergenic	60.0%
	GACGCCAAGGACCGTTGACA+GGG	+	chr4.4:81797798-81797817	None:intergenic	60.0%
	GCTGCAAGAGAAGCGGTGTG+TGG	+	chr4.4:81798185-81798204	None:intergenic	60.0%
	GGTCTCTTTGTACAGCCCCC+TGG	-	chr4.4:81798106-81798125	MS.gene048088:CDS	60.0%
	TAAGCCAATGGGGTCGGTCG+GGG	+	chr4.4:81797966-81797985	None:intergenic	60.0%
	TCGTGGCCTCGGCAATGTCA+AGG	-	chr4.4:81797537-81797556	MS.gene048088:CDS	60.0%
	TCTTTGTACAGCCCCCTGGC+TGG	-	chr4.4:81798110-81798129	MS.gene048088:CDS	60.0%
!	CTGTTATGAGGGGCACGCCA+TGG	+	chr4.4:81798219-81798238	None:intergenic	60.0%
!	TTATGAGGGGCACGCCATGG+AGG	+	chr4.4:81798216-81798235	None:intergenic	60.0%
	GCCTGGAACTGTCGTGGCCT+CGG	-	chr4.4:81797526-81797545	MS.gene048088:CDS	65.0%
	GTGGCGGCATCGCCGTTCTA+TGG	-	chr4.4:81797707-81797726	MS.gene048088:intron	65.0%
	TAGACGGCGGTGACCACTCC+TGG	+	chr4.4:81797064-81797083	None:intergenic	65.0%
!	ACCACTCCTGGCCTTCCTCC+CGG	+	chr4.4:81797052-81797071	None:intergenic	65.0%
!!	CAGAGGCTCTCGTTGGCTCC+GGG	-	chr4.4:81797031-81797050	MS.gene048088:intron	65.0%
!!	GCAGAGGCTCTCGTTGGCTC+CGG	-	chr4.4:81797030-81797049	MS.gene048088:intron	65.0%
!!	TCTCGTTGGCTCCGGGAGGA+AGG	-	chr4.4:81797038-81797057	MS.gene048088:intron	65.0%
	GCCGAGGCCACGACAGTTCC+AGG	+	chr4.4:81797530-81797549	None:intergenic	70.0%
	GGGCCCCCTCGTTTGTCGGA+AGG	+	chr4.4:81797946-81797965	None:intergenic	70.0%
	GTCGGGGCCCCCTCGTTTGT+CGG	+	chr4.4:81797950-81797969	None:intergenic	70.0%
	TCCGGGAGGAAGGCCAGGAG+TGG	-	chr4.4:81797048-81797067	MS.gene048088:intron	70.0%
	TTGGCTCCGGGAGGAAGGCC+AGG	-	chr4.4:81797043-81797062	MS.gene048088:intron	70.0%
!	ATCGGCAGCGCCTGGCTCTC+AGG	-	chr4.4:81797478-81797497	MS.gene048088:CDS	70.0%
!	TGAGGGGCACGCCATGGAGG+TGG	+	chr4.4:81798213-81798232	None:intergenic	70.0%
!!	AGGCTCTCGTTGGCTCCGGG+AGG	-	chr4.4:81797034-81797053	MS.gene048088:intron	70.0%
	TCCCGGCAGGCCTGAGAGCC+AGG	+	chr4.4:81797491-81797510	None:intergenic	75.0%
!	CGCCTGGCTCTCAGGCCTGC+CGG	-	chr4.4:81797486-81797505	MS.gene048088:CDS	75.0%
!	GCCTGGCTCTCAGGCCTGCC+GGG	-	chr4.4:81797487-81797506	MS.gene048088:CDS	75.0%
!	GGGGCCCCGACCGACCCCAT+TGG	-	chr4.4:81797959-81797978	MS.gene048088:CDS	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	81796303	81798264	81796303	ID=MS.gene048088
chr4.4	mRNA	81796303	81798264	81796303	ID=MS.gene048088.t1;Parent=MS.gene048088
chr4.4	exon	81797931	81798264	81797931	ID=MS.gene048088.t1.exon1;Parent=MS.gene048088.t1
chr4.4	CDS	81797931	81798264	81797931	ID=cds.MS.gene048088.t1;Parent=MS.gene048088.t1
chr4.4	exon	81797131	81797594	81797131	ID=MS.gene048088.t1.exon2;Parent=MS.gene048088.t1
chr4.4	CDS	81797131	81797594	81797131	ID=cds.MS.gene048088.t1;Parent=MS.gene048088.t1
chr4.4	exon	81796461	81796774	81796461	ID=MS.gene048088.t1.exon3;Parent=MS.gene048088.t1
chr4.4	CDS	81796461	81796774	81796461	ID=cds.MS.gene048088.t1;Parent=MS.gene048088.t1
chr4.4	exon	81796303	81796363	81796303	ID=MS.gene048088.t1.exon4;Parent=MS.gene048088.t1
chr4.4	CDS	81796303	81796363	81796303	ID=cds.MS.gene048088.t1;Parent=MS.gene048088.t1

Gene Sequence

>MS.gene048088

ATGACATCACTGCCAAACTTGCATCTAAGTGATGAAGAGGAAGAACTTGAGATTCCAATTGAGGGTTTTCCTAATGATACTGCAGACACTAGTGCCAGCCTTGTGGGAAGATTTCTTACTGACAAACCAATTAGAGGGCATATGATGACATCCAAAATAGCTGAGTTTTGGCATCCTGGAAGAGGGGTCAACATTAAGGAAGTCGAACCAAACCTCTTCACATTCAAATTCTTCCATTATCGAGACATGCACGCCATCCTCAAAAAAGGTCCCTGGTATTTCGACAACAACCTGCTGATCCTTAATACTCTCCCAGATGGCGCACCTGCTGAAAGTGTACCACTACAATCAGTTCCGTTCTGGGTCCGAATTCATGATATTCCTGTGGGATTTATGACAGAAAGAGTAGGAAAAGACCTGGGGAATTTCATTGGGGAATTTCTGGAGTATGACGTCAAAAACGGAGCTAATCATCTCAGATCCTATATGCGTATTCATGTGTTGCTTGATGTCAACAAACCACTCAAAAGGCAGAAGAAAATCAAGCGTCCAGGGGGTAACACGCAAACTGTCAAATTCAAATACGAACGCTTAGGAAATTTTTGTTACTATTGTGGAGCTCTTGGTCACATTGAAGACTACTGTGACAAACTCTATTCTGTCGACTCAGATGATGGAGCAAGATTCTGGGGGCCTGAATTACGTGTCGACAAACAGAAGAACGAAGGCAGAGGCTCTCGTTGGCTCCGGGAGGAAGGCCAGGAGTGGTCACCGCCGTCTAACTCCGTATCAAAGACTGCCGGAGACGTTTCAGTTGATCCAGCTAACGGTAACAGTCATGCATTAACTGCAGCTCCCTCACCTGCTGAAACGGTCAATTTAGCTGACCTGTTGAGGAATCCTAATTTAATTCGGCCATCAGTAAGCATTAAACAGCAGCCCCCTCATTTATCTCCCCATAATGTGACATTATTGGAAGAGGACAATGCAGCAATTATTCACAGTAACACAAAACGGTCACGCTCAGACTTGAATGAAGGATCTTTGTCTGCTGACTCATCAAATGCACGCCCCACATCCCTCAACATCCCTACACCACCTGCGCATAACAACACTCAGTCAACACCCATGGACGTTGTGAACACTAAAGCATCCTCAACTAGTGTGCCTTTTTTATCGGCAGCGCCTGGCTCTCAGGCCTGCCGGGAGCCATGAATGTTATAGCCTGGAACTGTCGTGGCCTCGGCAATGTCAAGGCAGTTCCCTGTATTAAAGACCTTGTCCGTGTCTATAAACCGGACATTGTTATCCTTATTGAGACTTTATGTAATAATAATAAAATTTCTGGTTTGAAGTATTCGATTGGCTTTGATTACCATTTCTCCGTAGACTGTATTGGTCGTAGTGGCGGCATCGCCGTTCTATGGCGAAATTCTGCACACTGTTCCATAATTAATTATTCACAACACTTTATAAATATGTCCATTCAGGACCCTGTCAACGGTCCTTGGCGTCTCACTGCCTTTTACGGTTACCCGGATCATGGTAGACGGCGTGATTCTTGGGATCTTCTTCGCACTCTTCATAGTCAGTCTGATGACCCCTGGTGTATTATCGGAGACTTCAATGATCATCTATCTCCTTCCGACAAACGAGGGGGCCCCGACCGACCCCATTGGCTTATTAGAGGTTTTCAACAAGCTGTTTCAGATTGTAACCTTATCGATCTTCCTCTCAATGGGTATCCATTCACTTGGTTCAAGAGCATAGGTACAAGTCATGCCAAAGAAGCACGCATTGATAGGTCTCTTTGTACAGCCCCCTGGCTGGAATTGTTCCCTCATGCCACGCTGCAAACTCTAGTAGCTCCTATGTCTGACCACACACCGCTTCTCTTGCAGCTTGATCCACCTCCATGGCGTGCCCCTCATAACAGCTTCCGTTTCAACAATTCTTGGCTGA

Protein sequence

>MS.gene048088.t1

MTSLPNLHLSDEEEELEIPIEGFPNDTADTSASLVGRFLTDKPIRGHMMTSKIAEFWHPGRGVNIKEVEPNLFTFKFFHYRDMHAILKKGPWYFDNNLLILNTLPDGAPAENDGARFWGPELRVDKQKNEGRGSRWLREEGQEWSPPSNSVSKTAGDVSVDPANGNSHALTAAPSPAETVNLADLLRNPNLIRPSVSIKQQPPHLSPHNVTLLEEDNAAIIHSNTKRSRSDLNEGSLSADSSNARPTSLNIPTPPAHNNTQSTPMDDPVNGPWRLTAFYGYPDHGRRRDSWDLLRTLHSQSDDPWCIIGDFNDHLSPSDKRGGPDRPHWLIRGFQQAVSDCNLIDLPLNGYPFTWFKSIGTSHAKEARIDSLIHLHGVPLITASVSTILG