AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene95561

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene95561.t1 MTR_3g053920 50.578 346 105 3 57 402 1 280 9.68e-105 315
MS.gene95561.t1 MTR_2g061500 72.868 129 35 0 57 185 1 129 1.10e-64 207
MS.gene95561.t1 MTR_7g011710 82.353 85 15 0 111 195 1 85 1.02e-43 152
MS.gene95561.t1 MTR_4g103530 66.316 95 32 0 111 205 1 95 4.98e-39 141
MS.gene95561.t1 MTR_6g033215 32.301 226 143 4 34 255 75 294 1.03e-31 124
MS.gene95561.t1 MTR_0010s0370 31.395 172 112 3 67 233 7 177 5.74e-23 96.7
MS.gene95561.t1 MTR_0010s0350 31.395 172 112 3 67 233 7 177 5.74e-23 96.7
MS.gene95561.t1 MTR_8g463110 52.542 118 56 0 345 462 1 118 1.53e-22 102
MS.gene95561.t1 MTR_8g463110 71.698 53 15 0 466 518 192 244 3.19e-18 88.6
MS.gene95561.t1 MTR_6g034215 74.000 50 13 0 468 517 198 247 1.22e-17 84.3
MS.gene95561.t1 MTR_4g020630 58.621 58 24 0 461 518 123 180 6.92e-17 84.0
MS.gene95561.t1 MTR_1g100687 50.000 68 28 1 451 518 121 182 1.60e-13 70.5
MS.gene95561.t1 MTR_1g036720 32.692 104 68 1 67 168 7 110 3.25e-13 66.6
MS.gene95561.t1 MTR_6g009010 51.515 66 26 1 452 517 191 250 6.00e-13 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene95561.t1 AT2G17920 26.291 213 151 3 64 272 9 219 1.29e-18 87.0
MS.gene95561.t1 AT3G57587 28.000 150 100 5 127 272 74 219 4.78e-16 80.1
MS.gene95561.t1 AT2G41590 26.220 164 117 2 111 272 58 219 4.99e-16 80.1
MS.gene95561.t1 AT5G36228 27.322 183 129 2 92 272 39 219 1.18e-15 79.0
MS.gene95561.t1 AT5G25200 26.220 164 117 2 111 272 58 219 1.40e-14 75.9
MS.gene95561.t1 AT5G18636 26.220 164 117 2 111 272 58 219 1.42e-14 75.9
MS.gene95561.t1 AT2G02103 26.829 164 116 2 111 272 58 219 1.84e-14 75.9
MS.gene95561.t1 AT2G13450 26.374 182 130 2 92 271 39 218 8.30e-14 73.6
MS.gene95561.t1 AT3G47920 25.676 148 106 2 127 272 3 148 1.08e-12 69.3
MS.gene95561.t1 AT4G02000 28.244 131 90 2 144 272 11 139 3.06e-12 68.2

Find 146 sgRNAs with CRISPR-Local

Find 253 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGCTGCTGTTGGGGTTAC+AGG 0.200804 4.3:-50766396 MS.gene95561:CDS
GCATCCAACTCGAACAATTC+TGG 0.221487 4.3:+50766909 None:intergenic
GGAGAGCAATTCAATAAAAT+AGG 0.235196 4.3:+50765575 None:intergenic
TGGACTCAGGAGCTAGGTTT+AGG 0.238825 4.3:+50767498 None:intergenic
GTCAAGGATGGTATTTGTTT+TGG 0.261292 4.3:+50767478 None:intergenic
CAGGGTATAGGCAGTTATTT+AGG 0.289260 4.3:-50767137 MS.gene95561:CDS
TTGCGGCCAGACTTTGTGTT+TGG 0.302196 4.3:+50767667 None:intergenic
GTAGCAGTTGGTTTGAGTTC+AGG 0.317862 4.3:+50766861 None:intergenic
ATCTGAATCATATGGACATC+TGG 0.320490 4.3:-50767208 MS.gene95561:CDS
CTACACCATTTGCTGCTGTT+GGG 0.323034 4.3:-50766404 MS.gene95561:CDS
TTTCAGTCCAGGCAGGTCTT+TGG 0.325795 4.3:-50766541 MS.gene95561:CDS
AATTGTGTTACGTTCATCAT+AGG 0.337463 4.3:+50767103 None:intergenic
AGCTATACGCTCGCTGAAAT+AGG 0.341018 4.3:+50767409 None:intergenic
TACAAATAATAAGTGGCTTC+AGG 0.342320 4.3:-50766823 MS.gene95561:CDS
ACATAGAAGCATGAGGATTC+TGG 0.346466 4.3:+50766775 None:intergenic
TTAGGTTGATTGCAGCAAAA+AGG 0.349461 4.3:+50767167 None:intergenic
ACTAGCTGACCGTGAGATTC+AGG 0.350824 4.3:-50767435 MS.gene95561:CDS
CCTCTTCCTCTTCTTAAATT+CGG 0.355243 4.3:+50766452 None:intergenic
ATCCTTGACCACTGCTTGAT+TGG 0.357752 4.3:-50767464 MS.gene95561:CDS
CCTTCACACCTCAATATTGC+TGG 0.357798 4.3:-50767548 MS.gene95561:CDS
CCTAATGTTGGTCAGGGTAT+AGG 0.362998 4.3:-50767149 MS.gene95561:CDS
AACATGGCCAAAGCGAAATA+TGG 0.367503 4.3:-50766633 MS.gene95561:CDS
GGACTCAGGAGCTAGGTTTA+GGG 0.370096 4.3:+50767499 None:intergenic
TGCGGCCAGACTTTGTGTTT+GGG 0.372094 4.3:+50767668 None:intergenic
GACATCTGGGTCCAGGTTCA+TGG 0.377490 4.3:-50767194 MS.gene95561:CDS
CAATCAACCTAATGTTGGTC+AGG 0.393128 4.3:-50767156 MS.gene95561:CDS
CCTATACCCTGACCAACATT+AGG 0.407219 4.3:+50767149 None:intergenic
ATTCGGAACCAGAGACATCT+TGG 0.409795 4.3:+50766469 None:intergenic
GAATGCGTGGCACTTGGAAC+CGG 0.414975 4.3:-50765510 MS.gene95561:CDS
AACAGCACCATATTTCGCTT+TGG 0.415579 4.3:+50766626 None:intergenic
CTGATGATGGAGTTCGCAAT+TGG 0.418534 4.3:-50766887 MS.gene95561:CDS
GCTACACCATTTGCTGCTGT+TGG 0.430163 4.3:-50766405 MS.gene95561:CDS
GCACTTGGAACCGGGGTTCA+AGG 0.432818 4.3:-50765501 MS.gene95561:CDS
CCAGGCAGGTCTTTGGTGCT+CGG 0.438412 4.3:-50766534 MS.gene95561:CDS
AAATTTAAATATGAGAAACT+TGG 0.439350 4.3:-50766981 MS.gene95561:CDS
GCAGCTATAGTCTGAACAGC+AGG 0.444323 4.3:+50766507 None:intergenic
AAGTTCAGATGTTTGATTTG+AGG 0.445481 4.3:-50765301 None:intergenic
CTCTGTCTATCTGAATCATA+TGG 0.452734 4.3:-50767216 MS.gene95561:CDS
CATCCAACTCGAACAATTCT+GGG 0.452904 4.3:+50766910 None:intergenic
ACGATCGAGACACGCTTGCC+TGG 0.453258 4.3:+50767374 None:intergenic
CGCTTATACACTTGAGGTCG+AGG 0.453558 4.3:+50765548 None:intergenic
ATAGCTCGTGCTTGGAAGCC+AGG 0.454378 4.3:-50767392 MS.gene95561:CDS
GCTTTCCCAAACACAAAGTC+TGG 0.459440 4.3:-50767673 MS.gene95561:CDS
GTGGCACAACAGATGGGATT+GGG 0.470606 4.3:+50766799 None:intergenic
TGATGATGGAGTTCGCAATT+GGG 0.471307 4.3:-50766886 MS.gene95561:CDS
AGGACTTTGTTACTAACTCT+TGG 0.472741 4.3:-50765481 MS.gene95561:CDS
AATAGGTCCAAATGTTAGTC+CGG 0.474424 4.3:-50766364 MS.gene95561:CDS
TTGCTGCTGTTGGGGTTACA+GGG 0.475793 4.3:-50766395 MS.gene95561:CDS
CGTGGCACAACAGATGGGAT+TGG 0.478185 4.3:+50766798 None:intergenic
TCGGCATCTGCTTTCAGTCC+AGG 0.478536 4.3:-50766552 MS.gene95561:CDS
TGGAAAGTCCGTGTCAGTAC+TGG 0.479342 4.3:-50767020 MS.gene95561:CDS
TTCTGGCGTGGCACAACAGA+TGG 0.481022 4.3:+50766792 None:intergenic
CTTTGTTACTAACTCTTGGC+AGG 0.482025 4.3:-50765477 MS.gene95561:intron
TTATGAGAATGCGTGGCACT+TGG 0.483162 4.3:-50765516 MS.gene95561:CDS
ATCAGTTAGGACAAGGATGC+AGG 0.483351 4.3:+50767580 None:intergenic
GTTGGACAGTGACATTAATA+CGG 0.492066 4.3:+50767054 None:intergenic
AAGGATCCATGGAATCAGTT+AGG 0.492101 4.3:+50767567 None:intergenic
AGAGACATCTTGGGCGTCCT+CGG 0.494720 4.3:+50766479 None:intergenic
TGCTGCTTCCACTAGTGTCT+CGG 0.496213 4.3:-50766571 MS.gene95561:CDS
GAGGACGCCCAAGATGTCTC+TGG 0.497539 4.3:-50766477 MS.gene95561:CDS
TGATTCAGATAGACAGAGGT+TGG 0.498592 4.3:+50767221 None:intergenic
GAGAGCAATTCAATAAAATA+GGG 0.501531 4.3:+50765576 None:intergenic
AATGCGTGGCACTTGGAACC+GGG 0.502654 4.3:-50765509 MS.gene95561:CDS
TTCGAGTTGGATGCTGATGA+TGG 0.504794 4.3:-50766900 MS.gene95561:CDS
TACACCATTTGCTGCTGTTG+GGG 0.505080 4.3:-50766403 MS.gene95561:CDS
TAAGAAGAGGAAGAGGCCGC+TGG 0.510965 4.3:-50766445 MS.gene95561:CDS
GATGCAGGAGTGAAATTGAC+TGG 0.511013 4.3:+50767595 None:intergenic
CCTTGTCCTAACTGATTCCA+TGG 0.513859 4.3:-50767573 MS.gene95561:CDS
GTGTTCTTGACGACGGTCCA+TGG 0.514316 4.3:-50767295 MS.gene95561:CDS
TGCTGCAATCAACCTAATGT+TGG 0.514462 4.3:-50767161 MS.gene95561:CDS
CACCACCTGCAGGAAAGGTT+CGG 0.519735 4.3:+50766742 None:intergenic
ATAGGTCCAAATGTTAGTCC+GGG 0.527905 4.3:-50766363 MS.gene95561:CDS
TGGTTTAACCATTGCTGAAG+AGG 0.527912 4.3:-50767528 MS.gene95561:CDS
TGTTACAGGTGTGGACTGCT+TGG 0.532304 4.3:-50766951 MS.gene95561:CDS
TGTTGAGACTCTTGTTGCTC+CGG 0.533871 4.3:-50765612 MS.gene95561:intron
GACTCAAAATTGTGTTCTTG+CGG 0.536410 4.3:+50767650 None:intergenic
ATGCCCAGAATTGTTCGAGT+TGG 0.537003 4.3:-50766913 MS.gene95561:CDS
TCTGAATCATATGGACATCT+GGG 0.537402 4.3:-50767207 MS.gene95561:CDS
TGTAACACCACCTGCAGGAA+AGG 0.538038 4.3:+50766737 None:intergenic
TCATATGGACATCTGGGTCC+AGG 0.538871 4.3:-50767201 MS.gene95561:CDS
CCGAGCACCAAAGACCTGCC+TGG 0.539289 4.3:+50766534 None:intergenic
GGTTTAACCATTGCTGAAGA+GGG 0.541991 4.3:-50767527 MS.gene95561:CDS
GTAACCCCAACAGCAGCAAA+TGG 0.546736 4.3:+50766399 None:intergenic
AAAGCGAAATATGGTGCTGT+TGG 0.546762 4.3:-50766624 MS.gene95561:CDS
GATTCAGATAGACAGAGGTT+GGG 0.547212 4.3:+50767222 None:intergenic
GCTGACCGAACCTTTCCTGC+AGG 0.548268 4.3:-50766747 MS.gene95561:CDS
GCGAGCGTATAGCTCGTGCT+TGG 0.548338 4.3:-50767400 MS.gene95561:CDS
ATTGAGGTGTGAAGGATCCA+TGG 0.550039 4.3:+50767556 None:intergenic
GGACAACACCAGGTTGGATA+CGG 0.554055 4.3:+50767243 None:intergenic
TGAAAATTGTCATAAAGCCA+TGG 0.556477 4.3:+50767278 None:intergenic
TTCGGAACCAGAGACATCTT+GGG 0.559015 4.3:+50766470 None:intergenic
ACATCGGTATAAATAGCAAA+CGG 0.562622 4.3:+50767716 None:intergenic
GTTCTGCTACAAATAATAAG+TGG 0.564932 4.3:-50766830 MS.gene95561:CDS
CCAGCAATATTGAGGTGTGA+AGG 0.565967 4.3:+50767548 None:intergenic
GATGATGGAGTTCGCAATTG+GGG 0.566738 4.3:-50766885 MS.gene95561:CDS
CATCTGCTTTCAGTCCAGGC+AGG 0.566806 4.3:-50766548 MS.gene95561:CDS
GTCATGGACCGTATCCAACC+TGG 0.567873 4.3:-50767251 MS.gene95561:CDS
ACAGAGGTTGGGACAACACC+AGG 0.569642 4.3:+50767233 None:intergenic
TCTCCTTGCTGCTCAGAACA+TGG 0.569836 4.3:-50766649 MS.gene95561:CDS
TGGTTAAACCAGCAATATTG+AGG 0.572613 4.3:+50767540 None:intergenic
AAACCAACTGCTACTCGCAT+AGG 0.573678 4.3:-50766852 MS.gene95561:CDS
GTAACAAAGTCCTTGAACCC+CGG 0.574550 4.3:+50765491 None:intergenic
GTCTCGATCGTCAAAACTGA+TGG 0.576823 4.3:-50767362 MS.gene95561:CDS
CAATAAAATAGGGTAATGAT+CGG 0.578626 4.3:+50765586 None:intergenic
GGTTAAGCCCTCTTCAGCAA+TGG 0.579403 4.3:+50767520 None:intergenic
CCGAATTTAAGAAGAGGAAG+AGG 0.581538 4.3:-50766452 MS.gene95561:CDS
GAACCTATGCGAGTAGCAGT+TGG 0.592464 4.3:+50766849 None:intergenic
CCATGGAATCAGTTAGGACA+AGG 0.596804 4.3:+50767573 None:intergenic
CTGGTTCCGAATTTAAGAAG+AGG 0.597278 4.3:-50766458 MS.gene95561:CDS
GACCAATCAAGCAGTGGTCA+AGG 0.598354 4.3:+50767462 None:intergenic
ATGGACCGTCGTCAAGAACA+CGG 0.603972 4.3:+50767297 None:intergenic
GCACTTGTAACACCACCTGC+AGG 0.604124 4.3:+50766732 None:intergenic
TCTGGCGTGGCACAACAGAT+GGG 0.604472 4.3:+50766793 None:intergenic
GGGCATCATTCATCTTGTGA+TGG 0.606379 4.3:+50767318 None:intergenic
AATCAAGCAGTGGTCAAGGA+TGG 0.608238 4.3:+50767466 None:intergenic
TACACTTGAGGTCGAGGTGT+AGG 0.611434 4.3:+50765554 None:intergenic
GAGACACTAGTGGAAGCAGC+AGG 0.614674 4.3:+50766573 None:intergenic
AATAGGCAGCCTGAATCTCA+CGG 0.617647 4.3:+50767426 None:intergenic
AAATTGCGCTTATACACTTG+AGG 0.617728 4.3:+50765542 None:intergenic
AGCAGATGCCGAGACACTAG+TGG 0.619083 4.3:+50766563 None:intergenic
CATATTCACCAGTACTGACA+CGG 0.619899 4.3:+50767012 None:intergenic
GACTATAGCTGCTGACTCCG+AGG 0.620388 4.3:-50766496 MS.gene95561:CDS
GGAAAGCATGAAGCAGACTG+TGG 0.623035 4.3:+50767689 None:intergenic
ACGGACTTTCAATCTCATGT+AGG 0.624136 4.3:+50767073 None:intergenic
AGGCCGCTGGAACTTCAGAA+TGG 0.625482 4.3:-50766432 MS.gene95561:CDS
AATCAACCTAATGTTGGTCA+GGG 0.626589 4.3:-50767155 MS.gene95561:CDS
GACCGAACCTTTCCTGCAGG+TGG 0.630768 4.3:-50766744 MS.gene95561:CDS
AAAATTGCATTGGAGAGGAG+CGG 0.632329 4.3:+50766598 None:intergenic
ATGCGTGGCACTTGGAACCG+GGG 0.634260 4.3:-50765508 MS.gene95561:CDS
TGGACCGTCGTCAAGAACAC+GGG 0.639270 4.3:+50767298 None:intergenic
AGGTCCAAATGTTAGTCCGG+GGG 0.646856 4.3:-50766361 MS.gene95561:CDS
TAGGTCCAAATGTTAGTCCG+GGG 0.650054 4.3:-50766362 MS.gene95561:CDS
TGGCCATGTTCTGAGCAGCA+AGG 0.652415 4.3:+50766646 None:intergenic
CATACAGTCATTAAAAGTCA+CGG 0.654209 4.3:+50766710 None:intergenic
CAGCTATAGTCTGAACAGCA+GGG 0.654974 4.3:+50766508 None:intergenic
ATGATGGAGTTCGCAATTGG+GGG 0.655788 4.3:-50766884 MS.gene95561:CDS
AGGTTGGGACAACACCAGGT+TGG 0.657973 4.3:+50767237 None:intergenic
GAAGCATGAGGATTCTGGCG+TGG 0.662469 4.3:+50766780 None:intergenic
AGCAGACTGTGGATTGACAT+CGG 0.670077 4.3:+50767700 None:intergenic
GCATGAAACATAGAAGCATG+AGG 0.672941 4.3:+50766768 None:intergenic
TCACCATTCTGAAGTTCCAG+CGG 0.679710 4.3:+50766429 None:intergenic
CATATGATTCAGATAGACAG+AGG 0.683531 4.3:+50767217 None:intergenic
ATAGGGTAATGATCGGACGC+CGG 0.684886 4.3:+50765593 None:intergenic
GGTCCAAATGTTAGTCCGGG+GGG 0.710407 4.3:-50766360 MS.gene95561:CDS
GTACACGACCAATCAAGCAG+TGG 0.718956 4.3:+50767456 None:intergenic
GATGCCCGTGTTCTTGACGA+CGG 0.719173 4.3:-50767302 MS.gene95561:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTAAATATGAGAAACT+TGG - chr4.3:50766044-50766063 MS.gene95561:intron 15.0%
!! TCATATTACTATAGAGATTA+TGG - chr4.3:50767032-50767051 MS.gene95561:CDS 20.0%
! AGGAAATAAATTAAACCAAG+AGG + chr4.3:50767385-50767404 None:intergenic 25.0%
! CAATAAAATAGGGTAATGAT+CGG + chr4.3:50767442-50767461 None:intergenic 25.0%
! GAGAGCAATTCAATAAAATA+GGG + chr4.3:50767452-50767471 None:intergenic 25.0%
!! GGAGTTCTTCAATTTTATTA+CGG + chr4.3:50766897-50766916 None:intergenic 25.0%
!!! CTTCAATGTCTTTTTTAAGT+TGG + chr4.3:50767653-50767672 None:intergenic 25.0%
!!! TATTAATGGATTTCTTCAAG+CGG - chr4.3:50767245-50767264 MS.gene95561:CDS 25.0%
AATCCATTAATAAGCCAATG+TGG + chr4.3:50767237-50767256 None:intergenic 30.0%
AATCGTAACCAAGCAAAAAA+CGG + chr4.3:50766918-50766937 None:intergenic 30.0%
AATTGTGTTACGTTCATCAT+AGG + chr4.3:50765925-50765944 None:intergenic 30.0%
ACATCAGTTTCAAGAAACAA+TGG + chr4.3:50766719-50766738 None:intergenic 30.0%
ACATCGGTATAAATAGCAAA+CGG + chr4.3:50765312-50765331 None:intergenic 30.0%
CATACAGTCATTAAAAGTCA+CGG + chr4.3:50766318-50766337 None:intergenic 30.0%
GGAGAGCAATTCAATAAAAT+AGG + chr4.3:50767453-50767472 None:intergenic 30.0%
GTTCTGCTACAAATAATAAG+TGG - chr4.3:50766195-50766214 MS.gene95561:intron 30.0%
GTTTCTTGAAACTGATGTAA+TGG - chr4.3:50766721-50766740 MS.gene95561:CDS 30.0%
TACAAATAATAAGTGGCTTC+AGG - chr4.3:50766202-50766221 MS.gene95561:intron 30.0%
TCACTTAGGAATAAAAGATC+CGG + chr4.3:50766862-50766881 None:intergenic 30.0%
TGAAAATTGTCATAAAGCCA+TGG + chr4.3:50765750-50765769 None:intergenic 30.0%
! GTTACAGGGAATTTTGTAAT+AGG - chr4.3:50766644-50766663 MS.gene95561:CDS 30.0%
! TGACAATTTTCACATTGTCA+TGG - chr4.3:50765758-50765777 MS.gene95561:intron 30.0%
!! AGCAAGGAGATCATTTTTAA+GGG + chr4.3:50766366-50766385 None:intergenic 30.0%
!!! AACTTGGAGTTTTTTGTTAC+AGG - chr4.3:50766060-50766079 MS.gene95561:intron 30.0%
AAATTGCGCTTATACACTTG+AGG + chr4.3:50767486-50767505 None:intergenic 35.0%
AATAGGTCCAAATGTTAGTC+CGG - chr4.3:50766661-50766680 MS.gene95561:CDS 35.0%
AATCAACCTAATGTTGGTCA+GGG - chr4.3:50765870-50765889 MS.gene95561:intron 35.0%
ACCTAGGTAAATGAGTTTAG+TGG - chr4.3:50766765-50766784 MS.gene95561:CDS 35.0%
AGGACTTTGTTACTAACTCT+TGG - chr4.3:50767544-50767563 MS.gene95561:CDS 35.0%
AGGTAAAAATTGCATTGGAG+AGG + chr4.3:50766435-50766454 None:intergenic 35.0%
ATCTGAATCATATGGACATC+TGG - chr4.3:50765817-50765836 MS.gene95561:intron 35.0%
CATATGATTCAGATAGACAG+AGG + chr4.3:50765811-50765830 None:intergenic 35.0%
CCTCTTCCTCTTCTTAAATT+CGG + chr4.3:50766576-50766595 None:intergenic 35.0%
CTAAACTCATTTACCTAGGT+AGG + chr4.3:50766765-50766784 None:intergenic 35.0%
CTCTGTCTATCTGAATCATA+TGG - chr4.3:50765809-50765828 MS.gene95561:intron 35.0%
CTGAGGATATATCTATTTGG+CGG - chr4.3:50767613-50767632 MS.gene95561:CDS 35.0%
GACTCAAAATTGTGTTCTTG+CGG + chr4.3:50765378-50765397 None:intergenic 35.0%
GAGATTATGGATTCTGTTCA+TGG - chr4.3:50767045-50767064 MS.gene95561:CDS 35.0%
GTGCTGAGGATATATCTATT+TGG - chr4.3:50767610-50767629 MS.gene95561:CDS 35.0%
GTTGGACAGTGACATTAATA+CGG + chr4.3:50765974-50765993 None:intergenic 35.0%
TCTGAATCATATGGACATCT+GGG - chr4.3:50765818-50765837 MS.gene95561:intron 35.0%
TGGAGAATGACAGGTTATTA+TGG - chr4.3:50767072-50767091 MS.gene95561:CDS 35.0%
TGGTTAAACCAGCAATATTG+AGG + chr4.3:50765488-50765507 None:intergenic 35.0%
! ATTTTCGTTATGAGAATGCG+TGG - chr4.3:50767502-50767521 MS.gene95561:CDS 35.0%
! GTCAAGGATGGTATTTGTTT+TGG + chr4.3:50765550-50765569 None:intergenic 35.0%
! TACGTTCATCATAGGTTTTG+AGG + chr4.3:50765917-50765936 None:intergenic 35.0%
! TCTTCAAGCGGTTATTGATT+CGG - chr4.3:50767257-50767276 MS.gene95561:CDS 35.0%
!! AGACCACATTGGCTTATTAA+TGG - chr4.3:50767231-50767250 MS.gene95561:CDS 35.0%
!! CAGCAAGGAGATCATTTTTA+AGG + chr4.3:50766367-50766386 None:intergenic 35.0%
!! TTAGGTTGATTGCAGCAAAA+AGG + chr4.3:50765861-50765880 None:intergenic 35.0%
!!! ATGGTATTTGTTTTGGACTC+AGG + chr4.3:50765543-50765562 None:intergenic 35.0%
!!! CTTTCCACTCTTTTTTCAGT+TGG + chr4.3:50765992-50766011 None:intergenic 35.0%
AAAAAGGAAGACCATGAACC+TGG + chr4.3:50765845-50765864 None:intergenic 40.0%
AAAATTGCATTGGAGAGGAG+CGG + chr4.3:50766430-50766449 None:intergenic 40.0%
AAATCGCCAAAAATGCACCA+CGG + chr4.3:50767168-50767187 None:intergenic 40.0%
AACAGCACCATATTTCGCTT+TGG + chr4.3:50766402-50766421 None:intergenic 40.0%
AACATGGCCAAAGCGAAATA+TGG - chr4.3:50766392-50766411 MS.gene95561:CDS 40.0%
AAGACTCTTGAACCAAGTGA+AGG + chr4.3:50767313-50767332 None:intergenic 40.0%
AAGGATCCATGGAATCAGTT+AGG + chr4.3:50765461-50765480 None:intergenic 40.0%
ACGGACTTTCAATCTCATGT+AGG + chr4.3:50765955-50765974 None:intergenic 40.0%
AGACTCTTGAACCAAGTGAA+GGG + chr4.3:50767312-50767331 None:intergenic 40.0%
AGAGTCTCAACAGTTGCATT+AGG + chr4.3:50767405-50767424 None:intergenic 40.0%
ATAGGTCCAAATGTTAGTCC+GGG - chr4.3:50766662-50766681 MS.gene95561:CDS 40.0%
CAATCAACCTAATGTTGGTC+AGG - chr4.3:50765869-50765888 MS.gene95561:intron 40.0%
CAGGGTATAGGCAGTTATTT+AGG - chr4.3:50765888-50765907 MS.gene95561:intron 40.0%
CATCCAACTCGAACAATTCT+GGG + chr4.3:50766118-50766137 None:intergenic 40.0%
CCGAATTTAAGAAGAGGAAG+AGG - chr4.3:50766573-50766592 MS.gene95561:CDS 40.0%
CTGGTTCCGAATTTAAGAAG+AGG - chr4.3:50766567-50766586 MS.gene95561:CDS 40.0%
CTGTCCAACTGAAAAAAGAG+TGG - chr4.3:50765985-50766004 MS.gene95561:intron 40.0%
CTTGAAACTGATGTAATGGC+AGG - chr4.3:50766725-50766744 MS.gene95561:CDS 40.0%
CTTTGTTACTAACTCTTGGC+AGG - chr4.3:50767548-50767567 MS.gene95561:CDS 40.0%
GATTCAGATAGACAGAGGTT+GGG + chr4.3:50765806-50765825 None:intergenic 40.0%
GCAGACAACTTCATCATATG+CGG - chr4.3:50767679-50767698 MS.gene95561:CDS 40.0%
GCAGCAGGTAAAAATTGCAT+TGG + chr4.3:50766440-50766459 None:intergenic 40.0%
GCATATGATGAAGTTGTCTG+CGG + chr4.3:50767680-50767699 None:intergenic 40.0%
GCCACTAAACTCATTTACCT+AGG + chr4.3:50766769-50766788 None:intergenic 40.0%
GGTAAATGAGTTTAGTGGCA+TGG - chr4.3:50766770-50766789 MS.gene95561:CDS 40.0%
GGTTTAACCATTGCTGAAGA+GGG - chr4.3:50765498-50765517 MS.gene95561:CDS 40.0%
GTTTAGTGGCATGGAATTGT+CGG - chr4.3:50766779-50766798 MS.gene95561:CDS 40.0%
TGATTCAGATAGACAGAGGT+TGG + chr4.3:50765807-50765826 None:intergenic 40.0%
TGCTGCAATCAACCTAATGT+TGG - chr4.3:50765864-50765883 MS.gene95561:intron 40.0%
TGGATTCTGTTCATGGTACT+TGG - chr4.3:50767052-50767071 MS.gene95561:CDS 40.0%
TGGTTTAACCATTGCTGAAG+AGG - chr4.3:50765497-50765516 MS.gene95561:CDS 40.0%
TTCACTTGGTTCAAGAGTCT+TGG - chr4.3:50767312-50767331 MS.gene95561:CDS 40.0%
TTTAGTGGCATGGAATTGTC+GGG - chr4.3:50766780-50766799 MS.gene95561:CDS 40.0%
! ACATAGAAGCATGAGGATTC+TGG + chr4.3:50766253-50766272 None:intergenic 40.0%
! GCATGAAACATAGAAGCATG+AGG + chr4.3:50766260-50766279 None:intergenic 40.0%
!! AAAGCGAAATATGGTGCTGT+TGG - chr4.3:50766401-50766420 MS.gene95561:CDS 40.0%
!! CATATTCACCAGTACTGACA+CGG + chr4.3:50766016-50766035 None:intergenic 40.0%
!! CTTCAAGCGGTTATTGATTC+GGG - chr4.3:50767258-50767277 MS.gene95561:CDS 40.0%
!! TGATGATGGAGTTCGCAATT+GGG - chr4.3:50766139-50766158 MS.gene95561:intron 40.0%
!!! GAAGAACTCCGTTTTTTGCT+TGG - chr4.3:50766907-50766926 MS.gene95561:CDS 40.0%
!!! GGAGTTTTTTGTTACAGGTG+TGG - chr4.3:50766065-50766084 MS.gene95561:intron 40.0%
AAACCAACTGCTACTCGCAT+AGG - chr4.3:50766173-50766192 MS.gene95561:intron 45.0%
AAAGATCCGGATTGAAGTGC+CGG + chr4.3:50766849-50766868 None:intergenic 45.0%
AACTCTCTCATCAATTCGCG+GGG - chr4.3:50767142-50767161 MS.gene95561:CDS 45.0%
AATAGGCAGCCTGAATCTCA+CGG + chr4.3:50765602-50765621 None:intergenic 45.0%
AATCAAGCAGTGGTCAAGGA+TGG + chr4.3:50765562-50765581 None:intergenic 45.0%
AGCTATACGCTCGCTGAAAT+AGG + chr4.3:50765619-50765638 None:intergenic 45.0%
ATCAGTTAGGACAAGGATGC+AGG + chr4.3:50765448-50765467 None:intergenic 45.0%
ATCCTTGACCACTGCTTGAT+TGG - chr4.3:50765561-50765580 MS.gene95561:CDS 45.0%
ATGCCCAGAATTGTTCGAGT+TGG - chr4.3:50766112-50766131 MS.gene95561:intron 45.0%
ATTCGGAACCAGAGACATCT+TGG + chr4.3:50766559-50766578 None:intergenic 45.0%
ATTGAGGTGTGAAGGATCCA+TGG + chr4.3:50765472-50765491 None:intergenic 45.0%
CAACTCTCTCATCAATTCGC+GGG - chr4.3:50767141-50767160 MS.gene95561:CDS 45.0%
CAGCTATAGTCTGAACAGCA+GGG + chr4.3:50766520-50766539 None:intergenic 45.0%
CATGGTACTTGGAGAATGAC+AGG - chr4.3:50767063-50767082 MS.gene95561:CDS 45.0%
CCAACTCTCTCATCAATTCG+CGG - chr4.3:50767140-50767159 MS.gene95561:CDS 45.0%
CCAGCAATATTGAGGTGTGA+AGG + chr4.3:50765480-50765499 None:intergenic 45.0%
CCATGGAATCAGTTAGGACA+AGG + chr4.3:50765455-50765474 None:intergenic 45.0%
CCTAATGTTGGTCAGGGTAT+AGG - chr4.3:50765876-50765895 MS.gene95561:intron 45.0%
CCTATACCCTGACCAACATT+AGG + chr4.3:50765879-50765898 None:intergenic 45.0%
CCTTCACACCTCAATATTGC+TGG - chr4.3:50765477-50765496 MS.gene95561:intron 45.0%
CCTTGATGCTAGTGAGAAGA+GGG - chr4.3:50767197-50767216 MS.gene95561:CDS 45.0%
CTTGATGCTAGTGAGAAGAG+GGG - chr4.3:50767198-50767217 MS.gene95561:CDS 45.0%
GAGTTGGCGAAGAAAATTCC+AGG + chr4.3:50767127-50767146 None:intergenic 45.0%
GATGCAGGAGTGAAATTGAC+TGG + chr4.3:50765433-50765452 None:intergenic 45.0%
GCATCCAACTCGAACAATTC+TGG + chr4.3:50766119-50766138 None:intergenic 45.0%
GCTTTCCCAAACACAAAGTC+TGG - chr4.3:50765352-50765371 MS.gene95561:intron 45.0%
GGGCATCATTCATCTTGTGA+TGG + chr4.3:50765710-50765729 None:intergenic 45.0%
GTAACAAAGTCCTTGAACCC+CGG + chr4.3:50767537-50767556 None:intergenic 45.0%
GTCGCAATTCTAGACCACAT+TGG - chr4.3:50767220-50767239 MS.gene95561:CDS 45.0%
GTCTCGATCGTCAAAACTGA+TGG - chr4.3:50765663-50765682 MS.gene95561:intron 45.0%
GTGAAGGGATAGCCTTCTAT+CGG + chr4.3:50767297-50767316 None:intergenic 45.0%
TAGAAGGCTATCCCTTCACT+TGG - chr4.3:50767298-50767317 MS.gene95561:CDS 45.0%
TAGGTCCAAATGTTAGTCCG+GGG - chr4.3:50766663-50766682 MS.gene95561:CDS 45.0%
TCCTTGATGCTAGTGAGAAG+AGG - chr4.3:50767196-50767215 MS.gene95561:CDS 45.0%
TGTTGAGACTCTTGTTGCTC+CGG - chr4.3:50767413-50767432 MS.gene95561:CDS 45.0%
TTAAGGTCCGGAATTGCACT+CGG + chr4.3:50766817-50766836 None:intergenic 45.0%
TTAGTGGCATGGAATTGTCG+GGG - chr4.3:50766781-50766800 MS.gene95561:CDS 45.0%
TTATGAGAATGCGTGGCACT+TGG - chr4.3:50767509-50767528 MS.gene95561:CDS 45.0%
TTCATATCTGTATCACCCCC+CGG + chr4.3:50766683-50766702 None:intergenic 45.0%
TTCGGAACCAGAGACATCTT+GGG + chr4.3:50766558-50766577 None:intergenic 45.0%
TTGTCAGACGTTCCGATAGA+AGG - chr4.3:50767282-50767301 MS.gene95561:CDS 45.0%
! AGCAGACTGTGGATTGACAT+CGG + chr4.3:50765328-50765347 None:intergenic 45.0%
! ATGATGGAGTTCGCAATTGG+GGG - chr4.3:50766141-50766160 MS.gene95561:intron 45.0%
! CCTTGTCCTAACTGATTCCA+TGG - chr4.3:50765452-50765471 MS.gene95561:intron 45.0%
! CTACACCATTTGCTGCTGTT+GGG - chr4.3:50766621-50766640 MS.gene95561:CDS 45.0%
! TACACCATTTGCTGCTGTTG+GGG - chr4.3:50766622-50766641 MS.gene95561:CDS 45.0%
!! CTGATGATGGAGTTCGCAAT+TGG - chr4.3:50766138-50766157 MS.gene95561:intron 45.0%
!! GATGATGGAGTTCGCAATTG+GGG - chr4.3:50766140-50766159 MS.gene95561:intron 45.0%
!! GTAGCAGTTGGTTTGAGTTC+AGG + chr4.3:50766167-50766186 None:intergenic 45.0%
!! TCACCATTCTGAAGTTCCAG+CGG + chr4.3:50766599-50766618 None:intergenic 45.0%
!! TTCGAGTTGGATGCTGATGA+TGG - chr4.3:50766125-50766144 MS.gene95561:intron 45.0%
!!! TTGTTTTGGACTCAGGAGCT+AGG + chr4.3:50765536-50765555 None:intergenic 45.0%
ACTAGCTGACCGTGAGATTC+AGG - chr4.3:50765590-50765609 MS.gene95561:CDS 50.0%
ACTGATGATCAGGCCTACCT+AGG - chr4.3:50766749-50766768 MS.gene95561:CDS 50.0%
AGGTCCAAATGTTAGTCCGG+GGG - chr4.3:50766664-50766683 MS.gene95561:CDS 50.0%
ATAGGGTAATGATCGGACGC+CGG + chr4.3:50767435-50767454 None:intergenic 50.0%
ATGGACCGTCGTCAAGAACA+CGG + chr4.3:50765731-50765750 None:intergenic 50.0%
CATATGCGGCTAGTGTCTTC+AGG - chr4.3:50767693-50767712 MS.gene95561:CDS 50.0%
CCCTCTTCTCACTAGCATCA+AGG + chr4.3:50767200-50767219 None:intergenic 50.0%
CCGCGAATTGATGAGAGAGT+TGG + chr4.3:50767143-50767162 None:intergenic 50.0%
CGCTTATACACTTGAGGTCG+AGG + chr4.3:50767480-50767499 None:intergenic 50.0%
CGGACCTTAAGTACCTAGTC+CGG - chr4.3:50766827-50766846 MS.gene95561:CDS 50.0%
CTCTACCGATGCGGTCTATA+GGG + chr4.3:50766948-50766967 None:intergenic 50.0%
GAACCTATGCGAGTAGCAGT+TGG + chr4.3:50766179-50766198 None:intergenic 50.0%
GACCAATCAAGCAGTGGTCA+AGG + chr4.3:50765566-50765585 None:intergenic 50.0%
GAGAGGTTAGATCGTGCTCT+TGG - chr4.3:50767354-50767373 MS.gene95561:CDS 50.0%
GCAGCTATAGTCTGAACAGC+AGG + chr4.3:50766521-50766540 None:intergenic 50.0%
GCATGGAATTGTCGGGGTTT+AGG - chr4.3:50766787-50766806 MS.gene95561:CDS 50.0%
GGACTCAGGAGCTAGGTTTA+GGG + chr4.3:50765529-50765548 None:intergenic 50.0%
GGTGAGCAAGAGTCTCACTT+AGG + chr4.3:50766876-50766895 None:intergenic 50.0%
GGTTAAGCCCTCTTCAGCAA+TGG + chr4.3:50765508-50765527 None:intergenic 50.0%
GGTTATTATGGCTACCCCGA+TGG - chr4.3:50767084-50767103 MS.gene95561:CDS 50.0%
GTAACCCCAACAGCAGCAAA+TGG + chr4.3:50766629-50766648 None:intergenic 50.0%
GTACACGACCAATCAAGCAG+TGG + chr4.3:50765572-50765591 None:intergenic 50.0%
GTGGCACAACAGATGGGATT+GGG + chr4.3:50766229-50766248 None:intergenic 50.0%
TAAGGTCCGGAATTGCACTC+GGG + chr4.3:50766816-50766835 None:intergenic 50.0%
TACACTTGAGGTCGAGGTGT+AGG + chr4.3:50767474-50767493 None:intergenic 50.0%
TATTATGGCTACCCCGATGG+AGG - chr4.3:50767087-50767106 MS.gene95561:CDS 50.0%
TCAGCACACGCAGACAATCT+CGG + chr4.3:50767597-50767616 None:intergenic 50.0%
TCATATGGACATCTGGGTCC+AGG - chr4.3:50765824-50765843 MS.gene95561:intron 50.0%
TCTCCTTGCTGCTCAGAACA+TGG - chr4.3:50766376-50766395 MS.gene95561:CDS 50.0%
TGCGGCCAGACTTTGTGTTT+GGG + chr4.3:50765360-50765379 None:intergenic 50.0%
TGGAAAGTCCGTGTCAGTAC+TGG - chr4.3:50766005-50766024 MS.gene95561:intron 50.0%
TGGACTCAGGAGCTAGGTTT+AGG + chr4.3:50765530-50765549 None:intergenic 50.0%
TGTAACACCACCTGCAGGAA+AGG + chr4.3:50766291-50766310 None:intergenic 50.0%
TGTCTCCCTATAGACCGCAT+CGG - chr4.3:50766940-50766959 MS.gene95561:CDS 50.0%
TTGCGGCCAGACTTTGTGTT+TGG + chr4.3:50765361-50765380 None:intergenic 50.0%
TTGCTGCTGTTGGGGTTACA+GGG - chr4.3:50766630-50766649 MS.gene95561:CDS 50.0%
TTTCAGTCCAGGCAGGTCTT+TGG - chr4.3:50766484-50766503 MS.gene95561:CDS 50.0%
TTTGCTGCTGTTGGGGTTAC+AGG - chr4.3:50766629-50766648 MS.gene95561:CDS 50.0%
! AGTGCCGGACTAGGTACTTA+AGG + chr4.3:50766834-50766853 None:intergenic 50.0%
! CGGACTAGGTACTTAAGGTC+CGG + chr4.3:50766829-50766848 None:intergenic 50.0%
! GCTACACCATTTGCTGCTGT+TGG - chr4.3:50766620-50766639 MS.gene95561:CDS 50.0%
! GGAAAGCATGAAGCAGACTG+TGG + chr4.3:50765339-50765358 None:intergenic 50.0%
! GGACAACACCAGGTTGGATA+CGG + chr4.3:50765785-50765804 None:intergenic 50.0%
! GTGCTCTTGGTAACACCTCT+TGG - chr4.3:50767367-50767386 MS.gene95561:CDS 50.0%
! TGCTGCTTCCACTAGTGTCT+CGG - chr4.3:50766454-50766473 MS.gene95561:CDS 50.0%
! TGTTACAGGTGTGGACTGCT+TGG - chr4.3:50766074-50766093 MS.gene95561:intron 50.0%
!! AATGGCAGGCACTGATGATC+AGG - chr4.3:50766739-50766758 MS.gene95561:CDS 50.0%
!!! GCGGGGGTCTAGCTTTATTT+TGG - chr4.3:50766968-50766987 MS.gene95561:CDS 50.0%
AATGCGTGGCACTTGGAACC+GGG - chr4.3:50767516-50767535 MS.gene95561:CDS 55.0%
ACAGAGGTTGGGACAACACC+AGG + chr4.3:50765795-50765814 None:intergenic 55.0%
AGAGACATCTTGGGCGTCCT+CGG + chr4.3:50766549-50766568 None:intergenic 55.0%
AGCACACCTACGACCTCCAT+CGG + chr4.3:50767103-50767122 None:intergenic 55.0%
AGCAGATGCCGAGACACTAG+TGG + chr4.3:50766465-50766484 None:intergenic 55.0%
AGGCCGCTGGAACTTCAGAA+TGG - chr4.3:50766593-50766612 MS.gene95561:CDS 55.0%
AGGTAGCCCGAGTGCAATTC+CGG - chr4.3:50766807-50766826 MS.gene95561:CDS 55.0%
AGGTTGGGACAACACCAGGT+TGG + chr4.3:50765791-50765810 None:intergenic 55.0%
ATAGCTCGTGCTTGGAAGCC+AGG - chr4.3:50765633-50765652 MS.gene95561:intron 55.0%
CACCACCTGCAGGAAAGGTT+CGG + chr4.3:50766286-50766305 None:intergenic 55.0%
CATCTGCTTTCAGTCCAGGC+AGG - chr4.3:50766477-50766496 MS.gene95561:CDS 55.0%
CCTAGTCCGGCACTTCAATC+CGG - chr4.3:50766840-50766859 MS.gene95561:CDS 55.0%
CCTCTACCGATGCGGTCTAT+AGG + chr4.3:50766949-50766968 None:intergenic 55.0%
CGTGGCACAACAGATGGGAT+TGG + chr4.3:50766230-50766249 None:intergenic 55.0%
GAAGCATGAGGATTCTGGCG+TGG + chr4.3:50766248-50766267 None:intergenic 55.0%
GAATGCGTGGCACTTGGAAC+CGG - chr4.3:50767515-50767534 MS.gene95561:CDS 55.0%
GACATCTGGGTCCAGGTTCA+TGG - chr4.3:50765831-50765850 MS.gene95561:intron 55.0%
GAGACACTAGTGGAAGCAGC+AGG + chr4.3:50766455-50766474 None:intergenic 55.0%
GAGATTGTCTGCGTGTGCTG+AGG - chr4.3:50767596-50767615 MS.gene95561:CDS 55.0%
GATGCCCGTGTTCTTGACGA+CGG - chr4.3:50765723-50765742 MS.gene95561:intron 55.0%
GCACTTGTAACACCACCTGC+AGG + chr4.3:50766296-50766315 None:intergenic 55.0%
GGTCCAAATGTTAGTCCGGG+GGG - chr4.3:50766665-50766684 MS.gene95561:CDS 55.0%
GTCATGGACCGTATCCAACC+TGG - chr4.3:50765774-50765793 MS.gene95561:intron 55.0%
GTGTTCTTGACGACGGTCCA+TGG - chr4.3:50765730-50765749 MS.gene95561:intron 55.0%
TAAGAAGAGGAAGAGGCCGC+TGG - chr4.3:50766580-50766599 MS.gene95561:CDS 55.0%
TCACCCCCCGGACTAACATT+TGG + chr4.3:50766671-50766690 None:intergenic 55.0%
TCGGCATCTGCTTTCAGTCC+AGG - chr4.3:50766473-50766492 MS.gene95561:CDS 55.0%
TCTGGCGTGGCACAACAGAT+GGG + chr4.3:50766235-50766254 None:intergenic 55.0%
TGGACCGTCGTCAAGAACAC+GGG + chr4.3:50765730-50765749 None:intergenic 55.0%
TTCTGGCGTGGCACAACAGA+TGG + chr4.3:50766236-50766255 None:intergenic 55.0%
! ATAGACCGCATCGGTAGAGG+CGG - chr4.3:50766949-50766968 MS.gene95561:CDS 55.0%
! CCTATAGACCGCATCGGTAG+AGG - chr4.3:50766946-50766965 MS.gene95561:CDS 55.0%
! TGGCCATGTTCTGAGCAGCA+AGG + chr4.3:50766382-50766401 None:intergenic 55.0%
!! GACTATAGCTGCTGACTCCG+AGG - chr4.3:50766529-50766548 MS.gene95561:CDS 55.0%
ACGATCGAGACACGCTTGCC+TGG + chr4.3:50765654-50765673 None:intergenic 60.0%
ATGCGTGGCACTTGGAACCG+GGG - chr4.3:50767517-50767536 MS.gene95561:CDS 60.0%
CACACCTACGACCTCCATCG+GGG + chr4.3:50767101-50767120 None:intergenic 60.0%
GACCGAACCTTTCCTGCAGG+TGG - chr4.3:50766281-50766300 MS.gene95561:intron 60.0%
GAGGACGCCCAAGATGTCTC+TGG - chr4.3:50766548-50766567 MS.gene95561:CDS 60.0%
GCACACCTACGACCTCCATC+GGG + chr4.3:50767102-50767121 None:intergenic 60.0%
GCACTTGGAACCGGGGTTCA+AGG - chr4.3:50767524-50767543 MS.gene95561:CDS 60.0%
GCGAGCGTATAGCTCGTGCT+TGG - chr4.3:50765625-50765644 MS.gene95561:intron 60.0%
GCGGCTAGTGTCTTCAGGTG+AGG - chr4.3:50767698-50767717 MS.gene95561:CDS 60.0%
GCTGACCGAACCTTTCCTGC+AGG - chr4.3:50766278-50766297 MS.gene95561:intron 60.0%
! TAGACCGCATCGGTAGAGGC+GGG - chr4.3:50766950-50766969 MS.gene95561:CDS 60.0%
!! CCAGGCAGGTCTTTGGTGCT+CGG - chr4.3:50766491-50766510 MS.gene95561:CDS 60.0%
!! CCGGATTGAAGTGCCGGACT+AGG + chr4.3:50766843-50766862 None:intergenic 60.0%
AACCTCTCCTCCACCGCTCG+CGG + chr4.3:50767342-50767361 None:intergenic 65.0%
CCGAGCACCAAAGACCTGCC+TGG + chr4.3:50766494-50766513 None:intergenic 65.0%
CTCATCAATTCGCGGGGCCG+TGG - chr4.3:50767148-50767167 MS.gene95561:CDS 65.0%
GAGGTCGTAGGTGTGCTGCC+TGG - chr4.3:50767106-50767125 MS.gene95561:CDS 65.0%
GCTACCCCGATGGAGGTCGT+AGG - chr4.3:50767094-50767113 MS.gene95561:CDS 65.0%
! AGACCGCATCGGTAGAGGCG+GGG - chr4.3:50766951-50766970 MS.gene95561:CDS 65.0%
! GCGGGGCCGTGGTGCATTTT+TGG - chr4.3:50767159-50767178 MS.gene95561:CDS 65.0%
GACCCCCGCCTCTACCGATG+CGG + chr4.3:50766957-50766976 None:intergenic 70.0%
GAGTCTTGGCACGCCGCGAG+CGG - chr4.3:50767326-50767345 MS.gene95561:CDS 70.0%
! GACCGCATCGGTAGAGGCGG+GGG - chr4.3:50766952-50766971 MS.gene95561:CDS 70.0%
TCTTGGCACGCCGCGAGCGG+TGG - chr4.3:50767329-50767348 MS.gene95561:CDS 75.0%
! CGCCGCGAGCGGTGGAGGAG+AGG - chr4.3:50767337-50767356 MS.gene95561:CDS 80.0%
! TGGCACGCCGCGAGCGGTGG+AGG - chr4.3:50767332-50767351 MS.gene95561:CDS 80.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 50765303 50767744 50765303 ID=MS.gene95561
chr4.3 mRNA 50765303 50767744 50765303 ID=MS.gene95561.t1;Parent=MS.gene95561
chr4.3 exon 50766344 50767744 50766344 ID=MS.gene95561.t1.exon1;Parent=MS.gene95561.t1
chr4.3 CDS 50766344 50767744 50766344 ID=cds.MS.gene95561.t1;Parent=MS.gene95561.t1
chr4.3 exon 50765478 50765627 50765478 ID=MS.gene95561.t1.exon2;Parent=MS.gene95561.t1
chr4.3 CDS 50765478 50765627 50765478 ID=cds.MS.gene95561.t1;Parent=MS.gene95561.t1
chr4.3 exon 50765303 50765332 50765303 ID=MS.gene95561.t1.exon3;Parent=MS.gene95561.t1
chr4.3 CDS 50765303 50765332 50765303 ID=cds.MS.gene95561.t1;Parent=MS.gene95561.t1
Gene Sequence

>MS.gene95561

ATGCTTCCGTTTGCTATTTATACCGATGTCAATCCACAGTCTGCTTCATGCTTTCCCAAACACAAAGTCTGGCCGCAAGAACACAATTTTGAGTCTGATTTTGTTTCGTCGTTCTTCTCTTCTGTTTCCAGTCAATTTCACTCCTGCATCCTTGTCCTAACTGATTCCATGGATCCTTCACACCTCAATATTGCTGGTTTAACCATTGCTGAAGAGGGCTTAACCCTAAACCTAGCTCCTGAGTCCAAAACAAATACCATCCTTGACCACTGCTTGATTGGTCGTGTACTAGCTGACCGTGAGATTCAGGCTGCCTATTTCAGCGAGCGTATAGCTCGTGCTTGGAAGCCAGGCAAGCGTGTCTCGATCGTCAAAACTGATGGTGATCGCTTCTTGTTTCAATTCCATCACAAGATGAATGATGCCCGTGTTCTTGACGACGGTCCATGGCTTTATGACAATTTTCACATTGTCATGGACCGTATCCAACCTGGTGTTGTCCCAACCTCTGTCTATCTGAATCATATGGACATCTGGGTCCAGGTTCATGGTCTTCCTTTTTGCTGCAATCAACCTAATGTTGGTCAGGGTATAGGCAGTTATTTAGGTGTCCTCAAAACCTATGATGAACGTAACACAATTCATAGTACCTACATGAGATTGAAAGTCCGTATTAATGTCACTGTCCAACTGAAAAAAGAGTGGAAAGTCCGTGTCAGTACTGGTGAATATGTTACTGTTAAATTTAAATATGAGAAACTTGGAGTTTTTTGTTACAGGTGTGGACTGCTTGGACACACAGACAAAGTATGCCCAGAATTGTTCGAGTTGGATGCTGATGATGGAGTTCGCAATTGGGGGCCTGAACTCAAACCAACTGCTACTCGCATAGGTTCTGCTACAAATAATAAGTGGCTTCAGGACCCAATCCCATCTGTTGTGCCACGCCAGAATCCTCATGCTTCTATGTTTCATGCTGACCGAACCTTTCCTGCAGGTGGTGTTACAAGTGCCGTGACTTTTAATGACTGTATGCTTGCTGTTGACAGTCAAATTTCTGCCCTTAAAAATGATCTCCTTGCTGCTCAGAACATGGCCAAAGCGAAATATGGTGCTGTTGGCAACCGCTCCTCTCCAATGCAATTTTTACCTGCTGCTTCCACTAGTGTCTCGGCATCTGCTTTCAGTCCAGGCAGGTCTTTGGTGCTCGGTCTCCCTGCTGTTCAGACTATAGCTGCTGACTCCGAGGACGCCCAAGATGTCTCTGGTTCCGAATTTAAGAAGAGGAAGAGGCCGCTGGAACTTCAGAATGGTGAAGCTACACCATTTGCTGCTGTTGGGGTTACAGGGAATTTTGTAATAGGTCCAAATGTTAGTCCGGGGGGTGATACAGATATGAATGTAATCTCTAATCCATTGTTTCTTGAAACTGATGTAATGGCAGGCACTGATGATCAGGCCTACCTAGGTAAATGAGTTTAGTGGCATGGAATTGTCGGGGTTTAGGTAGCCCGAGTGCAATTCCGGACCTTAAGTACCTAGTCCGGCACTTCAATCCGGATCTTTTATTCCTAAGTGAGACTCTTGCTCACCGTAATAAAATTGAAGAACTCCGTTTTTTGCTTGGTTACGATTCTTGTCTCCCTATAGACCGCATCGGTAGAGGCGGGGGTCTAGCTTTATTTTGGCGCAATTCATTCAACTGTCATCTTATTGATTTTTCTAATAATCATATTACTATAGAGATTATGGATTCTGTTCATGGTACTTGGAGAATGACAGGTTATTATGGCTACCCCGATGGAGGTCGTAGGTGTGCTGCCTGGAATTTTCTTCGCCAACTCTCTCATCAATTCGCGGGGCCGTGGTGCATTTTTGGCGATTTCAACGACATCCTTGATGCTAGTGAGAAGAGGGGTCGCAATTCTAGACCACATTGGCTTATTAATGGATTTCTTCAAGCGGTTATTGATTCGGGCTTGTCAGACGTTCCGATAGAAGGCTATCCCTTCACTTGGTTCAAGAGTCTTGGCACGCCGCGAGCGGTGGAGGAGAGGTTAGATCGTGCTCTTGGTAACACCTCTTGGTTTAATTTATTTCCTAATGCAACTGTTGAGACTCTTGTTGCTCCGGCGTCCGATCATTACCCTATTTTATTGAATTGCTCTCCTACACCTCGACCTCAAGTGTATAAGCGCAATTTTCGTTATGAGAATGCGTGGCACTTGGAACCGGGGTTCAAGGACTTTGTTACTAACTCTTGGCAGGTAAATTCTACGCATACTCTTAGTCCGAGATTGTCTGCGTGTGCTGAGGATATATCTATTTGGCGGAAAACTCATTGTCACCAACTTAAAAAAGACATTGAAGATTGCCGCAGACAACTTCATCATATGCGGCTAGTGTCTTCAGGTGAGGATCAAGTTCAGATGTTTGATTTGA
Protein sequence

>MS.gene95561.t1

MLPFAIYTDVNPQSASCFPKHKVWPQEHNFESDFVSSFFSSVSSQFHSCILVLTDSMDPSHLNIAGLTIAEEGLTLNLAPESKTNTILDHCLIGRVLADREIQAAYFSERIARAWKPGKRVSIVKTDGDRFLFQFHHKMNDARVLDDGPWLYDNFHIVMDRIQPGVVPTSVYLNHMDIWVQVHGLPFCCNQPNVGQGIGSYLGVLKTYDERNTIHSTYMRLKVRINVTVQLKKEWKVRVSTGEYVTVKFKYEKLGVFCYRCGLLGHTDKVCPELFELDADDGVRNWGPELKPTATRIGSATNNKWLQDPIPSVVPRQNPHASMFHADRTFPAGGVTSAVTFNDCMLAVDSQISALKNDLLAAQNMAKAKYGAVGNRSSPMQFLPAASTSVSASAFSPGRSLVLGLPAVQTIAADSEDAQDVSGSEFKKRKRPLELQNGEATPFAAVGVTGNFVIGPNVSPGGDTDMNTLVAPASDHYPILLNCSPTPRPQVYKRNFRYENAWHLEPGFKDFVTNSWQVRIKFRCLI