Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37955.t1 | AES70414.1 | 57.1 | 347 | 80 | 5 | 1 | 345 | 1 | 280 | 3.10E-95 | 359 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37955.t1 | O04244 | 27.2 | 136 | 95 | 2 | 83 | 216 | 6 | 139 | 1.2e-10 | 69.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37955.t1 | G7J017 | 57.1 | 347 | 80 | 5 | 1 | 345 | 1 | 280 | 2.2e-95 | 359.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37955.t1 | MTR_3g053920 | 56.484 | 347 | 82 | 5 | 1 | 345 | 1 | 280 | 6.52e-119 | 348 |
MS.gene37955.t1 | MTR_2g061500 | 82.946 | 129 | 22 | 0 | 1 | 129 | 1 | 129 | 5.36e-75 | 231 |
MS.gene37955.t1 | MTR_4g103530 | 84.946 | 93 | 14 | 0 | 55 | 147 | 1 | 93 | 1.78e-52 | 174 |
MS.gene37955.t1 | MTR_4g103530 | 57.812 | 64 | 26 | 1 | 251 | 313 | 119 | 182 | 1.45e-13 | 69.3 |
MS.gene37955.t1 | MTR_7g011710 | 68.182 | 88 | 28 | 0 | 55 | 142 | 1 | 88 | 2.13e-36 | 131 |
MS.gene37955.t1 | MTR_6g033215 | 33.333 | 171 | 112 | 1 | 31 | 199 | 124 | 294 | 6.61e-32 | 123 |
MS.gene37955.t1 | MTR_0010s0370 | 36.364 | 176 | 104 | 4 | 8 | 177 | 4 | 177 | 1.26e-30 | 117 |
MS.gene37955.t1 | MTR_0010s0350 | 36.364 | 176 | 104 | 4 | 8 | 177 | 4 | 177 | 1.26e-30 | 117 |
MS.gene37955.t1 | MTR_8g463110 | 57.391 | 115 | 46 | 2 | 288 | 401 | 1 | 113 | 8.28e-20 | 92.4 |
MS.gene37955.t1 | MTR_1g036720 | 33.945 | 109 | 70 | 1 | 7 | 113 | 3 | 111 | 1.63e-14 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37955.t1 | AT2G17920 | 26.267 | 217 | 146 | 6 | 8 | 216 | 9 | 219 | 2.06e-18 | 85.9 |
MS.gene37955.t1 | AT5G36228 | 29.091 | 165 | 109 | 4 | 69 | 227 | 71 | 233 | 1.54e-16 | 81.3 |
MS.gene37955.t1 | AT3G57587 | 28.873 | 142 | 97 | 2 | 77 | 216 | 80 | 219 | 1.60e-16 | 81.3 |
MS.gene37955.t1 | AT2G41590 | 29.114 | 158 | 102 | 3 | 67 | 216 | 64 | 219 | 2.18e-16 | 80.9 |
MS.gene37955.t1 | AT2G13450 | 27.551 | 196 | 132 | 5 | 27 | 215 | 26 | 218 | 1.00e-15 | 79.0 |
MS.gene37955.t1 | AT3G31430 | 28.646 | 192 | 125 | 7 | 30 | 215 | 126 | 311 | 5.19e-15 | 76.3 |
MS.gene37955.t1 | AT3G47920 | 28.873 | 142 | 97 | 2 | 77 | 216 | 9 | 148 | 7.64e-15 | 75.5 |
MS.gene37955.t1 | AT2G02103 | 26.984 | 189 | 122 | 4 | 36 | 216 | 39 | 219 | 1.82e-14 | 75.1 |
MS.gene37955.t1 | AT5G18636 | 27.465 | 142 | 99 | 2 | 77 | 216 | 80 | 219 | 1.91e-14 | 74.7 |
MS.gene37955.t1 | AT5G25200 | 27.465 | 142 | 99 | 2 | 77 | 216 | 80 | 219 | 1.96e-14 | 74.7 |
MS.gene37955.t1 | AT4G02000 | 27.206 | 136 | 95 | 2 | 83 | 216 | 6 | 139 | 8.84e-13 | 69.3 |
Find 121 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTTGCTGCTGATGGGGATA+TGG | 0.215580 | 5.1:-76520228 | MS.gene37955:CDS |
CAAGGTCTAGGAAGCTTTCT+AGG | 0.220477 | 5.1:-76520968 | MS.gene37955:CDS |
TGTCACTGTCCCTTTGAAAA+AGG | 0.255154 | 5.1:-76520876 | MS.gene37955:CDS |
CTGATGATGGTGTTCGGAAC+TGG | 0.260825 | 5.1:-76520718 | MS.gene37955:CDS |
CACCATCAGCAGGATTGTTT+TGG | 0.282463 | 5.1:+76520609 | None:intergenic |
AACCCGTTTGACTGGCTTCC+AGG | 0.282685 | 5.1:+76521213 | None:intergenic |
CGACATACGTTCACTGAAAT+AGG | 0.296935 | 5.1:+76521240 | None:intergenic |
CGTCAGATCATTATCCTATA+TGG | 0.298679 | 5.1:-76519420 | MS.gene37955:CDS |
ATCTGGTCAAATGCATTTCC+TGG | 0.324399 | 5.1:-76520429 | MS.gene37955:CDS |
TCCTAGACCTTGACCTACTT+TGG | 0.331729 | 5.1:+76520979 | None:intergenic |
CCTAGACCTTGACCTACTTT+GGG | 0.343147 | 5.1:+76520980 | None:intergenic |
CAAGTACATGGGCTGCCTTT+TGG | 0.351190 | 5.1:-76521013 | MS.gene37955:CDS |
TCGAGGATGGCCGTAGGTTC+AGG | 0.358106 | 5.1:+76521310 | None:intergenic |
CTTGTTTCAGTTCCATCATA+AGG | 0.363309 | 5.1:-76521161 | MS.gene37955:CDS |
TAATTCTATCCATGGCAATA+TGG | 0.367244 | 5.1:+76521089 | None:intergenic |
GCAGCCAACAGGTGTGAAAT+TGG | 0.376585 | 5.1:+76520334 | None:intergenic |
CCCTCAAACCTCAACCTTGA+TGG | 0.382465 | 5.1:-76521379 | MS.gene37955:CDS |
TAATGAAATGGCCGAGGCTT+AGG | 0.389758 | 5.1:+76519385 | None:intergenic |
TTCCTGGCTTCTTCTTCCAC+AGG | 0.401249 | 5.1:-76520413 | MS.gene37955:CDS |
CCCTGTGGTGCTTGGTCTAC+CGG | 0.404074 | 5.1:-76520360 | MS.gene37955:CDS |
TTTGCTGCTGATGGGGATAT+GGG | 0.404206 | 5.1:-76520227 | MS.gene37955:CDS |
TGGTGCGGCACAGCAGGGAT+AGG | 0.407635 | 5.1:+76520629 | None:intergenic |
GATATGGGGAATGATGTAAT+AGG | 0.417898 | 5.1:-76520212 | MS.gene37955:CDS |
GCTACTCCATTTGCTGCTGA+TGG | 0.423600 | 5.1:-76520236 | MS.gene37955:CDS |
GGTATGAGTGCTGGTCTATC+TGG | 0.423909 | 5.1:-76520446 | MS.gene37955:CDS |
CCTCTACGCCCTGTGGTGCT+TGG | 0.424094 | 5.1:-76520368 | MS.gene37955:CDS |
CTACTCCATTTGCTGCTGAT+GGG | 0.426270 | 5.1:-76520235 | MS.gene37955:CDS |
CCATCAAGGTTGAGGTTTGA+GGG | 0.429032 | 5.1:+76521379 | None:intergenic |
ATCCTCGAAAACTGCTTGAT+TGG | 0.431045 | 5.1:-76521295 | MS.gene37955:CDS |
TCCACAGGGAACTCGGTCTC+TGG | 0.433306 | 5.1:-76520398 | MS.gene37955:CDS |
GTTCACTGAAATAGGCAAAC+TGG | 0.436795 | 5.1:+76521248 | None:intergenic |
GCCGGTAGACCAAGCACCAC+AGG | 0.441984 | 5.1:+76520359 | None:intergenic |
GCCATCAAGGTTGAGGTTTG+AGG | 0.448490 | 5.1:+76521378 | None:intergenic |
GTGTCCGGAGCTATATGAAC+TGG | 0.448875 | 5.1:-76520744 | MS.gene37955:CDS |
GTGATCGTAACCCGTTTGAC+TGG | 0.449354 | 5.1:+76521205 | None:intergenic |
CAGGTGCGGTTTCGAGGTTG+AGG | 0.459074 | 5.1:+76521329 | None:intergenic |
TGTGATTCGTCGCAGCCAAC+AGG | 0.459104 | 5.1:+76520323 | None:intergenic |
GGAGAGCATTGCAACCATAT+AGG | 0.464456 | 5.1:+76519406 | None:intergenic |
GCAACTCCAGCAGTCGCGTT+AGG | 0.469031 | 5.1:+76520575 | None:intergenic |
TTCTTCTTCCACAGGGAACT+CGG | 0.469783 | 5.1:-76520405 | MS.gene37955:CDS |
AAATGTTGAGCATAATGAAA+TGG | 0.471113 | 5.1:+76519373 | None:intergenic |
GTGAACGTATGTCGCGTGCC+TGG | 0.474223 | 5.1:-76521231 | MS.gene37955:CDS |
TGTCACAGGTGTGGACTGAT+TGG | 0.475493 | 5.1:-76520782 | MS.gene37955:CDS |
ACAAAGCTAGGCACGACACC+AGG | 0.476615 | 5.1:+76521064 | None:intergenic |
TAGGTTCAGGTGCGGTTTCG+AGG | 0.480077 | 5.1:+76521323 | None:intergenic |
TCCCTGTGGAAGAAGAAGCC+AGG | 0.487101 | 5.1:+76520411 | None:intergenic |
TGCCTGGAAGCCAGTCAAAC+GGG | 0.491071 | 5.1:-76521215 | MS.gene37955:CDS |
TGATGATGGTGTTCGGAACT+GGG | 0.494621 | 5.1:-76520717 | MS.gene37955:CDS |
GGTGCGGCACAGCAGGGATA+GGG | 0.495687 | 5.1:+76520630 | None:intergenic |
CAAAGGGACAGTGACATCAA+TGG | 0.496314 | 5.1:+76520883 | None:intergenic |
GCTGCTCCTAACGCGACTGC+TGG | 0.496945 | 5.1:-76520581 | MS.gene37955:CDS |
GTTGAGGTTTGAGGGATCCA+TGG | 0.500518 | 5.1:+76521387 | None:intergenic |
TTGGGTTGAATGAAACCAAA+AGG | 0.500604 | 5.1:+76520998 | None:intergenic |
TGGCTTGACTTTGTCTGAAG+AGG | 0.501031 | 5.1:-76521359 | MS.gene37955:CDS |
TCACATGATGACTCTGATGC+TGG | 0.502596 | 5.1:-76520305 | MS.gene37955:CDS |
ATATCCCCATCAGCAGCAAA+TGG | 0.503201 | 5.1:+76520230 | None:intergenic |
GTGCCTGGAAGCCAGTCAAA+CGG | 0.507895 | 5.1:-76521216 | MS.gene37955:CDS |
CAGACAAAGTCAAGCCATCA+AGG | 0.513055 | 5.1:+76521365 | None:intergenic |
GGTTTCATTCAACCCAAAGT+AGG | 0.516836 | 5.1:-76520992 | MS.gene37955:CDS |
GGCTTGACTTTGTCTGAAGA+GGG | 0.518030 | 5.1:-76521358 | MS.gene37955:CDS |
GCAGCAAAGCCACCATCAGC+AGG | 0.519762 | 5.1:+76520599 | None:intergenic |
TGATTCAGAGGCACAAAGCT+AGG | 0.520009 | 5.1:+76521052 | None:intergenic |
GCAACACGTGTCCTTGATGA+AGG | 0.520257 | 5.1:-76521133 | MS.gene37955:CDS |
TCATACAGATAAGGTGTGTC+CGG | 0.520652 | 5.1:-76520759 | MS.gene37955:CDS |
TGGACTCTGATGATGGTGTT+CGG | 0.521790 | 5.1:-76520724 | MS.gene37955:CDS |
AAGTCAAGCCATCAAGGTTG+AGG | 0.523037 | 5.1:+76521371 | None:intergenic |
GTGTTGCATCCACCTTATGA+TGG | 0.531201 | 5.1:+76521149 | None:intergenic |
AGGTGCGGTTTCGAGGTTGA+GGG | 0.531473 | 5.1:+76521330 | None:intergenic |
TGATGACTCTGATGCTGGAT+CGG | 0.533215 | 5.1:-76520300 | MS.gene37955:CDS |
TACTCCATTTGCTGCTGATG+GGG | 0.534392 | 5.1:-76520234 | MS.gene37955:CDS |
GCAAAACAAGGTATGAGTGC+TGG | 0.538920 | 5.1:-76520455 | MS.gene37955:CDS |
GCTGCCAATTTCACACCTGT+TGG | 0.540212 | 5.1:-76520338 | MS.gene37955:CDS |
CAAAAGAACCATTACTAGCT+CGG | 0.541532 | 5.1:+76520843 | None:intergenic |
TGATTGCGGTAAGTTGACTT+TGG | 0.543870 | 5.1:+76520513 | None:intergenic |
TCCTGGCTTCTTCTTCCACA+GGG | 0.551402 | 5.1:-76520412 | MS.gene37955:CDS |
ATGGAGTAGCACCATTCTGA+AGG | 0.554857 | 5.1:+76520249 | None:intergenic |
GAAGAAGAGGAAAAGAATGA+AGG | 0.555634 | 5.1:-76520273 | MS.gene37955:CDS |
GAGTCCAGTTCATATAGCTC+CGG | 0.559683 | 5.1:+76520740 | None:intergenic |
AAACCTACTGCTCAACGTGT+TGG | 0.561250 | 5.1:-76520683 | MS.gene37955:CDS |
TTGAGGTTTGAGGGATCCAT+GGG | 0.564403 | 5.1:+76521388 | None:intergenic |
CCCAAAGTAGGTCAAGGTCT+AGG | 0.565295 | 5.1:-76520980 | MS.gene37955:CDS |
CACCAAAACAATCCTGCTGA+TGG | 0.567709 | 5.1:-76520611 | MS.gene37955:CDS |
TATGAACTGGACTCTGATGA+TGG | 0.569418 | 5.1:-76520731 | MS.gene37955:CDS |
ATAACCATGGGCCTTCATCA+AGG | 0.573698 | 5.1:+76521122 | None:intergenic |
ACCAGGGTTAATTCTATCCA+TGG | 0.574236 | 5.1:+76521081 | None:intergenic |
GTACCAACACGTTGAGCAGT+AGG | 0.574794 | 5.1:+76520680 | None:intergenic |
AAGGTCTAGGAAGCTTTCTA+GGG | 0.575889 | 5.1:-76520967 | MS.gene37955:CDS |
GGAAGTTATCATATAACCAT+GGG | 0.577714 | 5.1:+76521110 | None:intergenic |
TGCAATGCTCTCCTAAGCCT+CGG | 0.577931 | 5.1:-76519396 | MS.gene37955:CDS |
ATTCAACCCAAAGTAGGTCA+AGG | 0.579948 | 5.1:-76520986 | MS.gene37955:CDS |
CGAAACCGCACCTGAACCTA+CGG | 0.586367 | 5.1:-76521320 | MS.gene37955:CDS |
AGAATGAAGGCCCTTCAGAA+TGG | 0.587277 | 5.1:-76520260 | MS.gene37955:CDS |
TGGAAGTTATCATATAACCA+TGG | 0.589493 | 5.1:+76521109 | None:intergenic |
TTGCTGCTGATGGGGATATG+GGG | 0.590108 | 5.1:-76520226 | MS.gene37955:CDS |
ACTGATTGGTCATACAGATA+AGG | 0.595655 | 5.1:-76520768 | MS.gene37955:CDS |
CAAAACAATCCTGCTGATGG+TGG | 0.596395 | 5.1:-76520608 | MS.gene37955:CDS |
CTGGATCGGAACTGAAGAAG+AGG | 0.597418 | 5.1:-76520286 | MS.gene37955:CDS |
GTACTGCTGCAACTAACCGC+TGG | 0.598254 | 5.1:-76520661 | MS.gene37955:CDS |
TGATAACTTCCATATTGCCA+TGG | 0.602021 | 5.1:-76521098 | MS.gene37955:CDS |
TGGCGTGTCCGAGCTAGTAA+TGG | 0.603265 | 5.1:-76520851 | MS.gene37955:CDS |
CCAAGCACCACAGGGCGTAG+AGG | 0.605015 | 5.1:+76520368 | None:intergenic |
TACGATCACAAAATCTGTTG+AGG | 0.605542 | 5.1:-76521191 | MS.gene37955:CDS |
GTTTCAGTTCCATCATAAGG+TGG | 0.609100 | 5.1:-76521158 | MS.gene37955:CDS |
ACAGGTGTGAAATTGGCAGC+CGG | 0.610215 | 5.1:+76520341 | None:intergenic |
TGAGCATAATGAAATGGCCG+AGG | 0.623885 | 5.1:+76519379 | None:intergenic |
AAGCATATCATGTTTGATTG+CGG | 0.633966 | 5.1:+76520499 | None:intergenic |
ACTGGATTTCTCGATCTGCA+AGG | 0.638048 | 5.1:+76521266 | None:intergenic |
ACCGCTGCCAAAGCAAAACA+AGG | 0.638892 | 5.1:-76520467 | MS.gene37955:CDS |
GACATTCGAACATTAAAACT+CGG | 0.644790 | 5.1:+76520542 | None:intergenic |
TGGAGTAGCACCATTCTGAA+GGG | 0.645130 | 5.1:+76520250 | None:intergenic |
CCGGTAGACCAAGCACCACA+GGG | 0.648540 | 5.1:+76520360 | None:intergenic |
GGGTCGCTCAAAGCTTATGA+CGG | 0.652222 | 5.1:-76520947 | MS.gene37955:CDS |
GTGTCCTTGATGAAGGCCCA+TGG | 0.656413 | 5.1:-76521126 | MS.gene37955:CDS |
ACCAGAGACCGAGTTCCCTG+TGG | 0.681742 | 5.1:+76520397 | None:intergenic |
ATAGGATAATGATCTGACGC+AGG | 0.682741 | 5.1:+76519424 | None:intergenic |
GATGATGGTGTTCGGAACTG+GGG | 0.683724 | 5.1:-76520716 | MS.gene37955:CDS |
GCCATGGATAGAATTAACCC+TGG | 0.684951 | 5.1:-76521082 | MS.gene37955:CDS |
TCTGCTGCCTCTACGCCCTG+TGG | 0.686926 | 5.1:-76520375 | MS.gene37955:CDS |
GATGGCCGTAGGTTCAGGTG+CGG | 0.690072 | 5.1:+76521315 | None:intergenic |
GGATAGGGTCTTGAAGCCAG+CGG | 0.712214 | 5.1:+76520645 | None:intergenic |
CAAAGCTAGGCACGACACCA+GGG | 0.726322 | 5.1:+76521065 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTTAAGTATGAAAAATT+GGG | - | chr5.1:76519920-76519939 | MS.gene37955:intron | 10.0% |
!!! | TAATTTTAAGTATGAAAAAT+TGG | - | chr5.1:76519919-76519938 | MS.gene37955:intron | 10.0% |
!!! | GTAGTTCTTCAATTTTATTT+CGG | + | chr5.1:76520773-76520792 | None:intergenic | 20.0% |
! | AAATGTTGAGCATAATGAAA+TGG | + | chr5.1:76521362-76521381 | None:intergenic | 25.0% |
! | ATAAATTATTTGCAAGAGCA+CGG | + | chr5.1:76521244-76521263 | None:intergenic | 25.0% |
! | GAAATTATAGATACTGTTCT+TGG | - | chr5.1:76520921-76520940 | MS.gene37955:CDS | 25.0% |
! | TTCAACAGTTATATGATTGT+TGG | + | chr5.1:76520904-76520923 | None:intergenic | 25.0% |
! | TTTAAATCAGGAATTGTACT+CGG | + | chr5.1:76520693-76520712 | None:intergenic | 25.0% |
AAGCATATCATGTTTGATTG+CGG | + | chr5.1:76520236-76520255 | None:intergenic | 30.0% | |
ATAGGAATTGATGTTAGTCA+TGG | - | chr5.1:76520538-76520557 | MS.gene37955:CDS | 30.0% | |
GACATTCGAACATTAAAACT+CGG | + | chr5.1:76520193-76520212 | None:intergenic | 30.0% | |
GGAAGTTATCATATAACCAT+GGG | + | chr5.1:76519625-76519644 | None:intergenic | 30.0% | |
GTATGATGAAAATGCTGTAA+AGG | - | chr5.1:76520597-76520616 | MS.gene37955:CDS | 30.0% | |
GTGCTCTTGCAAATAATTTA+TGG | - | chr5.1:76521243-76521262 | MS.gene37955:CDS | 30.0% | |
TAATAACCAGTAACTCTTCA+AGG | + | chr5.1:76520948-76520967 | None:intergenic | 30.0% | |
TAATTCTATCCATGGCAATA+TGG | + | chr5.1:76519646-76519665 | None:intergenic | 30.0% | |
TAGGAATTGATGTTAGTCAT+GGG | - | chr5.1:76520539-76520558 | MS.gene37955:CDS | 30.0% | |
TGGAAGTTATCATATAACCA+TGG | + | chr5.1:76519626-76519645 | None:intergenic | 30.0% | |
TTAAATCAGGAATTGTACTC+GGG | + | chr5.1:76520692-76520711 | None:intergenic | 30.0% | |
! | ACAGCATTTTCATCATACAA+AGG | + | chr5.1:76520595-76520614 | None:intergenic | 30.0% |
! | ATTTTCGCTATGAAAATGCT+TGG | - | chr5.1:76521378-76521397 | MS.gene37955:CDS | 30.0% |
! | CTGATTTAAAATACCTAGTC+CGG | - | chr5.1:76520703-76520722 | MS.gene37955:CDS | 30.0% |
! | TAGTAATGGTTCTTTTGTGA+CGG | - | chr5.1:76519895-76519914 | MS.gene37955:intron | 30.0% |
! | TATTAGGGTTTTCCAAATAG+TGG | - | chr5.1:76520963-76520982 | MS.gene37955:CDS | 30.0% |
! | TGAAGAGTTACTGGTTATTA+GGG | - | chr5.1:76520948-76520967 | MS.gene37955:CDS | 30.0% |
! | TTGAAGAGTTACTGGTTATT+AGG | - | chr5.1:76520947-76520966 | MS.gene37955:CDS | 30.0% |
!!! | TCTGAATCACATCGATTTTT+GGG | - | chr5.1:76519694-76519713 | MS.gene37955:intron | 30.0% |
!!! | TTGAGCAGTAGGTTTTAAAT+AGG | + | chr5.1:76520044-76520063 | None:intergenic | 30.0% |
AGGAATTGATGTTAGTCATG+GGG | - | chr5.1:76520540-76520559 | MS.gene37955:CDS | 35.0% | |
CAAAAATCGATGTGATTCAG+AGG | + | chr5.1:76519695-76519714 | None:intergenic | 35.0% | |
CAAAAGAACCATTACTAGCT+CGG | + | chr5.1:76519892-76519911 | None:intergenic | 35.0% | |
CCTTGATGCTAAAGAGAAAA+GGG | - | chr5.1:76521073-76521092 | MS.gene37955:CDS | 35.0% | |
CGTCAGATCATTATCCTATA+TGG | - | chr5.1:76521312-76521331 | MS.gene37955:CDS | 35.0% | |
CTTGATGCTAAAGAGAAAAG+GGG | - | chr5.1:76521074-76521093 | MS.gene37955:CDS | 35.0% | |
CTTGTTTCAGTTCCATCATA+AGG | - | chr5.1:76519571-76519590 | MS.gene37955:intron | 35.0% | |
GAAGAAGAGGAAAAGAATGA+AGG | - | chr5.1:76520459-76520478 | MS.gene37955:CDS | 35.0% | |
GATATGGGGAATGATGTAAT+AGG | - | chr5.1:76520520-76520539 | MS.gene37955:CDS | 35.0% | |
TACGATCACAAAATCTGTTG+AGG | - | chr5.1:76519541-76519560 | MS.gene37955:intron | 35.0% | |
TCACTTAGGAATAGAAGATC+CGG | + | chr5.1:76520738-76520757 | None:intergenic | 35.0% | |
TCCTTGATGCTAAAGAGAAA+AGG | - | chr5.1:76521072-76521091 | MS.gene37955:CDS | 35.0% | |
TGATAACTTCCATATTGCCA+TGG | - | chr5.1:76519634-76519653 | MS.gene37955:intron | 35.0% | |
TTGATGCTAAAGAGAAAAGG+GGG | - | chr5.1:76521075-76521094 | MS.gene37955:CDS | 35.0% | |
! | ACTGATTGGTCATACAGATA+AGG | - | chr5.1:76519964-76519983 | MS.gene37955:intron | 35.0% |
! | AGATTTTCCAATGATGCGTT+CGG | + | chr5.1:76521281-76521300 | None:intergenic | 35.0% |
! | CAACTTTCTAATCGTTTTGC+AGG | - | chr5.1:76521017-76521036 | MS.gene37955:CDS | 35.0% |
!! | CGGACTAGGTATTTTAAATC+AGG | + | chr5.1:76520705-76520724 | None:intergenic | 35.0% |
!! | TTGGGTTGAATGAAACCAAA+AGG | + | chr5.1:76519737-76519756 | None:intergenic | 35.0% |
!!! | AATTGGGTGTTTTTTGTCAC+AGG | - | chr5.1:76519936-76519955 | MS.gene37955:intron | 35.0% |
!!! | ACTCATACCTTGTTTTGCTT+TGG | + | chr5.1:76520275-76520294 | None:intergenic | 35.0% |
!!! | ATTTTTGGGTGCAAGTACAT+GGG | - | chr5.1:76519708-76519727 | MS.gene37955:intron | 35.0% |
!!! | CTCTGAATCACATCGATTTT+TGG | - | chr5.1:76519693-76519712 | MS.gene37955:intron | 35.0% |
!!! | GAAGAACTACGTTTTTTGCT+TGG | - | chr5.1:76520783-76520802 | MS.gene37955:CDS | 35.0% |
AAATCTCCCAATATGCACCA+CGG | + | chr5.1:76521044-76521063 | None:intergenic | 40.0% | |
AAGGTCTAGGAAGCTTTCTA+GGG | - | chr5.1:76519765-76519784 | MS.gene37955:intron | 40.0% | |
AATTGATGTTAGTCATGGGG+GGG | - | chr5.1:76520543-76520562 | MS.gene37955:CDS | 40.0% | |
ACCAGGGTTAATTCTATCCA+TGG | + | chr5.1:76519654-76519673 | None:intergenic | 40.0% | |
ATAGGATAATGATCTGACGC+AGG | + | chr5.1:76521311-76521330 | None:intergenic | 40.0% | |
ATCCTCGAAAACTGCTTGAT+TGG | - | chr5.1:76519437-76519456 | MS.gene37955:intron | 40.0% | |
ATCTGGTCAAATGCATTTCC+TGG | - | chr5.1:76520303-76520322 | MS.gene37955:CDS | 40.0% | |
ATTCAACCCAAAGTAGGTCA+AGG | - | chr5.1:76519746-76519765 | MS.gene37955:intron | 40.0% | |
CGACATACGTTCACTGAAAT+AGG | + | chr5.1:76519495-76519514 | None:intergenic | 40.0% | |
GAATTGATGTTAGTCATGGG+GGG | - | chr5.1:76520542-76520561 | MS.gene37955:CDS | 40.0% | |
GATGAAAATGCTGTAAAGGC+AGG | - | chr5.1:76520601-76520620 | MS.gene37955:CDS | 40.0% | |
GCTACTAGACTCATTTACCT+AGG | + | chr5.1:76520645-76520664 | None:intergenic | 40.0% | |
GGAATTGATGTTAGTCATGG+GGG | - | chr5.1:76520541-76520560 | MS.gene37955:CDS | 40.0% | |
GGTAAATGAGTCTAGTAGCA+TGG | - | chr5.1:76520646-76520665 | MS.gene37955:CDS | 40.0% | |
GGTTTCATTCAACCCAAAGT+AGG | - | chr5.1:76519740-76519759 | MS.gene37955:intron | 40.0% | |
GTCTAGTAGCATGGAATTGT+CGG | - | chr5.1:76520655-76520674 | MS.gene37955:CDS | 40.0% | |
GTTCACTGAAATAGGCAAAC+TGG | + | chr5.1:76519487-76519506 | None:intergenic | 40.0% | |
GTTTCAGTTCCATCATAAGG+TGG | - | chr5.1:76519574-76519593 | MS.gene37955:intron | 40.0% | |
TATGAACTGGACTCTGATGA+TGG | - | chr5.1:76520001-76520020 | MS.gene37955:intron | 40.0% | |
TATGTTTCCGAACGCATCAT+TGG | - | chr5.1:76521271-76521290 | MS.gene37955:CDS | 40.0% | |
TCATACAGATAAGGTGTGTC+CGG | - | chr5.1:76519973-76519992 | MS.gene37955:intron | 40.0% | |
TCTAGTAGCATGGAATTGTC+GGG | - | chr5.1:76520656-76520675 | MS.gene37955:CDS | 40.0% | |
! | CCCTTTTCTCTTTAGCATCA+AGG | + | chr5.1:76521076-76521095 | None:intergenic | 40.0% |
! | CTGTCCCTTTGAAAAAGGAA+TGG | - | chr5.1:76519861-76519880 | MS.gene37955:intron | 40.0% |
! | GAAAGGTACGTCAGACAAAT+CGG | + | chr5.1:76521156-76521175 | None:intergenic | 40.0% |
! | TGATTGCGGTAAGTTGACTT+TGG | + | chr5.1:76520222-76520241 | None:intergenic | 40.0% |
! | TGTCACTGTCCCTTTGAAAA+AGG | - | chr5.1:76519856-76519875 | MS.gene37955:intron | 40.0% |
!! | AATCAAGCAGTTTTCGAGGA+TGG | + | chr5.1:76519438-76519457 | None:intergenic | 40.0% |
!!! | ACACGCCATTCCTTTTTCAA+AGG | + | chr5.1:76519869-76519888 | None:intergenic | 40.0% |
!!! | CACGCCATTCCTTTTTCAAA+GGG | + | chr5.1:76519868-76519887 | None:intergenic | 40.0% |
!!! | GATTTTTGGGTGCAAGTACA+TGG | - | chr5.1:76519707-76519726 | MS.gene37955:intron | 40.0% |
AAACCTACTGCTCAACGTGT+TGG | - | chr5.1:76520049-76520068 | MS.gene37955:intron | 45.0% | |
AACCTTTCTTCAACAGCACG+TGG | + | chr5.1:76521218-76521237 | None:intergenic | 45.0% | |
AAGGCTCTTGAACCAGGTAA+AGG | + | chr5.1:76521189-76521208 | None:intergenic | 45.0% | |
AAGTCAAGCCATCAAGGTTG+AGG | + | chr5.1:76519364-76519383 | None:intergenic | 45.0% | |
ACTGGATTTCTCGATCTGCA+AGG | + | chr5.1:76519469-76519488 | None:intergenic | 45.0% | |
AGAATGAAGGCCCTTCAGAA+TGG | - | chr5.1:76520472-76520491 | MS.gene37955:CDS | 45.0% | |
AGGCTCTTGAACCAGGTAAA+GGG | + | chr5.1:76521188-76521207 | None:intergenic | 45.0% | |
ATAACCATGGGCCTTCATCA+AGG | + | chr5.1:76519613-76519632 | None:intergenic | 45.0% | |
ATATCCCCATCAGCAGCAAA+TGG | + | chr5.1:76520505-76520524 | None:intergenic | 45.0% | |
ATGGAGTAGCACCATTCTGA+AGG | + | chr5.1:76520486-76520505 | None:intergenic | 45.0% | |
CAAAACAATCCTGCTGATGG+TGG | - | chr5.1:76520124-76520143 | MS.gene37955:intron | 45.0% | |
CAAAGGGACAGTGACATCAA+TGG | + | chr5.1:76519852-76519871 | None:intergenic | 45.0% | |
CAAGGTCTAGGAAGCTTTCT+AGG | - | chr5.1:76519764-76519783 | MS.gene37955:intron | 45.0% | |
CACCAAAACAATCCTGCTGA+TGG | - | chr5.1:76520121-76520140 | MS.gene37955:intron | 45.0% | |
CAGACAAAGTCAAGCCATCA+AGG | + | chr5.1:76519370-76519389 | None:intergenic | 45.0% | |
CCATCAAGGTTGAGGTTTGA+GGG | + | chr5.1:76519356-76519375 | None:intergenic | 45.0% | |
CCTAGACCTTGACCTACTTT+GGG | + | chr5.1:76519755-76519774 | None:intergenic | 45.0% | |
CGAAAGCCATTAATGAGCCA+CGG | + | chr5.1:76521116-76521135 | None:intergenic | 45.0% | |
CTAGACTCATTTACCTAGGC+AGG | + | chr5.1:76520641-76520660 | None:intergenic | 45.0% | |
CTAGTAGCATGGAATTGTCG+GGG | - | chr5.1:76520657-76520676 | MS.gene37955:CDS | 45.0% | |
CTTGGTCCTTGAAGAGTTAC+TGG | - | chr5.1:76520939-76520958 | MS.gene37955:CDS | 45.0% | |
GAGTCCAGTTCATATAGCTC+CGG | + | chr5.1:76519995-76520014 | None:intergenic | 45.0% | |
GCAAAACAAGGTATGAGTGC+TGG | - | chr5.1:76520277-76520296 | MS.gene37955:CDS | 45.0% | |
GCCATGGATAGAATTAACCC+TGG | - | chr5.1:76519650-76519669 | MS.gene37955:intron | 45.0% | |
GCTCATTAATGGCTTTCGTC+GGG | - | chr5.1:76521118-76521137 | MS.gene37955:CDS | 45.0% | |
GGCTCATTAATGGCTTTCGT+CGG | - | chr5.1:76521117-76521136 | MS.gene37955:CDS | 45.0% | |
GGCTTGACTTTGTCTGAAGA+GGG | - | chr5.1:76519374-76519393 | MS.gene37955:CDS | 45.0% | |
GTAAAGGGATACCCTTCGAA+AGG | + | chr5.1:76521173-76521192 | None:intergenic | 45.0% | |
GTGTTGCATCCACCTTATGA+TGG | + | chr5.1:76519586-76519605 | None:intergenic | 45.0% | |
TAATGAAATGGCCGAGGCTT+AGG | + | chr5.1:76521350-76521369 | None:intergenic | 45.0% | |
TCACATGATGACTCTGATGC+TGG | - | chr5.1:76520427-76520446 | MS.gene37955:CDS | 45.0% | |
TCCTAGACCTTGACCTACTT+TGG | + | chr5.1:76519756-76519775 | None:intergenic | 45.0% | |
TGAGCATAATGAAATGGCCG+AGG | + | chr5.1:76521356-76521375 | None:intergenic | 45.0% | |
TGATGACTCTGATGCTGGAT+CGG | - | chr5.1:76520432-76520451 | MS.gene37955:CDS | 45.0% | |
TGGAGTAGCACCATTCTGAA+GGG | + | chr5.1:76520485-76520504 | None:intergenic | 45.0% | |
TGGCTTGACTTTGTCTGAAG+AGG | - | chr5.1:76519373-76519392 | MS.gene37955:CDS | 45.0% | |
TGTCTGACGTACCTTTCGAA+GGG | - | chr5.1:76521159-76521178 | MS.gene37955:CDS | 45.0% | |
TTCTTCTTCCACAGGGAACT+CGG | - | chr5.1:76520327-76520346 | MS.gene37955:CDS | 45.0% | |
TTGTCTGACGTACCTTTCGA+AGG | - | chr5.1:76521158-76521177 | MS.gene37955:CDS | 45.0% | |
TTTACCTGGTTCAAGAGCCT+TGG | - | chr5.1:76521188-76521207 | MS.gene37955:CDS | 45.0% | |
TTTGCTGCTGATGGGGATAT+GGG | - | chr5.1:76520505-76520524 | MS.gene37955:CDS | 45.0% | |
! | ATTTGCTGCTGATGGGGATA+TGG | - | chr5.1:76520504-76520523 | MS.gene37955:CDS | 45.0% |
! | CACCATCAGCAGGATTGTTT+TGG | + | chr5.1:76520126-76520145 | None:intergenic | 45.0% |
! | CTACTCCATTTGCTGCTGAT+GGG | - | chr5.1:76520497-76520516 | MS.gene37955:CDS | 45.0% |
! | GACCAATCAAGCAGTTTTCG+AGG | + | chr5.1:76519442-76519461 | None:intergenic | 45.0% |
! | TACTCCATTTGCTGCTGATG+GGG | - | chr5.1:76520498-76520517 | MS.gene37955:CDS | 45.0% |
! | TGATTCAGAGGCACAAAGCT+AGG | + | chr5.1:76519683-76519702 | None:intergenic | 45.0% |
!! | GGAGAGCATTGCAACCATAT+AGG | + | chr5.1:76521329-76521348 | None:intergenic | 45.0% |
!! | TGATGATGGTGTTCGGAACT+GGG | - | chr5.1:76520015-76520034 | MS.gene37955:intron | 45.0% |
!! | TGGACTCTGATGATGGTGTT+CGG | - | chr5.1:76520008-76520027 | MS.gene37955:intron | 45.0% |
!!! | ACCTTGTTTTGCTTTGGCAG+CGG | + | chr5.1:76520269-76520288 | None:intergenic | 45.0% |
!!! | GGTGTTTTTTGTCACAGGTG+TGG | - | chr5.1:76519941-76519960 | MS.gene37955:intron | 45.0% |
!!! | TCAGCAGGATTGTTTTGGTG+CGG | + | chr5.1:76520121-76520140 | None:intergenic | 45.0% |
ACAGGTGTGAAATTGGCAGC+CGG | + | chr5.1:76520394-76520413 | None:intergenic | 50.0% | |
ACCGCTGCCAAAGCAAAACA+AGG | - | chr5.1:76520265-76520284 | MS.gene37955:CDS | 50.0% | |
AGGTCTCCGTGGCTCATTAA+TGG | - | chr5.1:76521107-76521126 | MS.gene37955:CDS | 50.0% | |
CCCAAAGTAGGTCAAGGTCT+AGG | - | chr5.1:76519752-76519771 | MS.gene37955:intron | 50.0% | |
CCCTCAAACCTCAACCTTGA+TGG | - | chr5.1:76519353-76519372 | MS.gene37955:CDS | 50.0% | |
CTGGATCGGAACTGAAGAAG+AGG | - | chr5.1:76520446-76520465 | MS.gene37955:CDS | 50.0% | |
GAAGATCCGGATTGAAGTGC+CGG | + | chr5.1:76520725-76520744 | None:intergenic | 50.0% | |
GCAACACGTGTCCTTGATGA+AGG | - | chr5.1:76519599-76519618 | MS.gene37955:intron | 50.0% | |
GCAGCCAACAGGTGTGAAAT+TGG | + | chr5.1:76520401-76520420 | None:intergenic | 50.0% | |
GCAGTTCGACGACCACTATT+TGG | + | chr5.1:76520978-76520997 | None:intergenic | 50.0% | |
GCCATCAAGGTTGAGGTTTG+AGG | + | chr5.1:76519357-76519376 | None:intergenic | 50.0% | |
GCTGCCAATTTCACACCTGT+TGG | - | chr5.1:76520394-76520413 | MS.gene37955:CDS | 50.0% | |
GGGTCGCTCAAAGCTTATGA+CGG | - | chr5.1:76519785-76519804 | MS.gene37955:intron | 50.0% | |
GGTGAGCAAGTGTCTCACTT+AGG | + | chr5.1:76520752-76520771 | None:intergenic | 50.0% | |
GTACCAACACGTTGAGCAGT+AGG | + | chr5.1:76520055-76520074 | None:intergenic | 50.0% | |
GTGATCGTAACCCGTTTGAC+TGG | + | chr5.1:76519530-76519549 | None:intergenic | 50.0% | |
GTGTCCGGAGCTATATGAAC+TGG | - | chr5.1:76519988-76520007 | MS.gene37955:intron | 50.0% | |
TCCTGGCTTCTTCTTCCACA+GGG | - | chr5.1:76520320-76520339 | MS.gene37955:CDS | 50.0% | |
TGCAATGCTCTCCTAAGCCT+CGG | - | chr5.1:76521336-76521355 | MS.gene37955:CDS | 50.0% | |
TGTGTCAATGTAGACCGCAC+CGG | - | chr5.1:76520816-76520835 | MS.gene37955:CDS | 50.0% | |
TTCCTGGCTTCTTCTTCCAC+AGG | - | chr5.1:76520319-76520338 | MS.gene37955:CDS | 50.0% | |
TTGCTGCTGATGGGGATATG+GGG | - | chr5.1:76520506-76520525 | MS.gene37955:CDS | 50.0% | |
! | AGAAAAGGGGGCGCAACATA+AGG | - | chr5.1:76521087-76521106 | MS.gene37955:CDS | 50.0% |
! | CACCACGTGCTGTTGAAGAA+AGG | - | chr5.1:76521213-76521232 | MS.gene37955:CDS | 50.0% |
! | CTAATCGTTTTGCAGGTCCG+TGG | - | chr5.1:76521024-76521043 | MS.gene37955:CDS | 50.0% |
! | GATGATGGTGTTCGGAACTG+GGG | - | chr5.1:76520016-76520035 | MS.gene37955:intron | 50.0% |
! | GCTACTCCATTTGCTGCTGA+TGG | - | chr5.1:76520496-76520515 | MS.gene37955:CDS | 50.0% |
! | TGTCACAGGTGTGGACTGAT+TGG | - | chr5.1:76519950-76519969 | MS.gene37955:intron | 50.0% |
!! | CAAGTACATGGGCTGCCTTT+TGG | - | chr5.1:76519719-76519738 | MS.gene37955:intron | 50.0% |
!! | CTGATGATGGTGTTCGGAAC+TGG | - | chr5.1:76520014-76520033 | MS.gene37955:intron | 50.0% |
!! | GGTATGAGTGCTGGTCTATC+TGG | - | chr5.1:76520286-76520305 | MS.gene37955:CDS | 50.0% |
!! | TCGAAGGGTATCCCTTTACC+TGG | - | chr5.1:76521174-76521193 | MS.gene37955:CDS | 50.0% |
!!! | GCGGGGGTCTTGCTTTATTT+TGG | - | chr5.1:76520844-76520863 | MS.gene37955:CDS | 50.0% |
AAAGGCAGGCCCTGATGATC+AGG | - | chr5.1:76520615-76520634 | MS.gene37955:CDS | 55.0% | |
ACAAAGCTAGGCACGACACC+AGG | + | chr5.1:76519671-76519690 | None:intergenic | 55.0% | |
AGGTGCGGTTTCGAGGTTGA+GGG | + | chr5.1:76519405-76519424 | None:intergenic | 55.0% | |
CAAAGCTAGGCACGACACCA+GGG | + | chr5.1:76519670-76519689 | None:intergenic | 55.0% | |
CCTAGTCCGGCACTTCAATC+CGG | - | chr5.1:76520716-76520735 | MS.gene37955:CDS | 55.0% | |
CGAAACCGCACCTGAACCTA+CGG | - | chr5.1:76519412-76519431 | MS.gene37955:CDS | 55.0% | |
CTAGGCAGGCCTGATCATCA+GGG | + | chr5.1:76520627-76520646 | None:intergenic | 55.0% | |
GCAGGTCCGTGGTGCATATT+GGG | - | chr5.1:76521035-76521054 | MS.gene37955:CDS | 55.0% | |
GCATGGAATTGTCGGGGTGT+AGG | - | chr5.1:76520663-76520682 | MS.gene37955:CDS | 55.0% | |
GGATAGGGTCTTGAAGCCAG+CGG | + | chr5.1:76520090-76520109 | None:intergenic | 55.0% | |
GTACTGCTGCAACTAACCGC+TGG | - | chr5.1:76520071-76520090 | MS.gene37955:intron | 55.0% | |
GTGCCTGGAAGCCAGTCAAA+CGG | - | chr5.1:76519516-76519535 | MS.gene37955:intron | 55.0% | |
GTGTCCTTGATGAAGGCCCA+TGG | - | chr5.1:76519606-76519625 | MS.gene37955:intron | 55.0% | |
TAGGTTCAGGTGCGGTTTCG+AGG | + | chr5.1:76519412-76519431 | None:intergenic | 55.0% | |
TCCCTGTGGAAGAAGAAGCC+AGG | + | chr5.1:76520324-76520343 | None:intergenic | 55.0% | |
TGCAGGTCCGTGGTGCATAT+TGG | - | chr5.1:76521034-76521053 | MS.gene37955:CDS | 55.0% | |
TGCCTGGAAGCCAGTCAAAC+GGG | - | chr5.1:76519517-76519536 | MS.gene37955:intron | 55.0% | |
TGGCGTGTCCGAGCTAGTAA+TGG | - | chr5.1:76519881-76519900 | MS.gene37955:intron | 55.0% | |
TGTGATTCGTCGCAGCCAAC+AGG | + | chr5.1:76520412-76520431 | None:intergenic | 55.0% | |
TGTGCCAAGGCTCTTGAACC+AGG | + | chr5.1:76521195-76521214 | None:intergenic | 55.0% | |
! | AATGTAGACCGCACCGGTAG+AGG | - | chr5.1:76520822-76520841 | MS.gene37955:CDS | 55.0% |
! | GTTTTGCTTTGGCAGCGGTC+TGG | + | chr5.1:76520264-76520283 | None:intergenic | 55.0% |
!! | AACCCGTTTGACTGGCTTCC+AGG | + | chr5.1:76519522-76519541 | None:intergenic | 55.0% |
!! | CAGTTTTCGAGGATGGCCGT+AGG | + | chr5.1:76519431-76519450 | None:intergenic | 55.0% |
!!! | TGTTTTGGTGCGGCACAGCA+GGG | + | chr5.1:76520111-76520130 | None:intergenic | 55.0% |
!!! | TTGTTTTGGTGCGGCACAGC+AGG | + | chr5.1:76520112-76520131 | None:intergenic | 55.0% |
ACCAGAGACCGAGTTCCCTG+TGG | + | chr5.1:76520338-76520357 | None:intergenic | 60.0% | |
CAACAGCACGTGGTGTGCCA+AGG | + | chr5.1:76521208-76521227 | None:intergenic | 60.0% | |
CAGGTGCGGTTTCGAGGTTG+AGG | + | chr5.1:76519406-76519425 | None:intergenic | 60.0% | |
CCCTGTGGTGCTTGGTCTAC+CGG | - | chr5.1:76520372-76520391 | MS.gene37955:CDS | 60.0% | |
CCGGTAGACCAAGCACCACA+GGG | + | chr5.1:76520375-76520394 | None:intergenic | 60.0% | |
CCTAGGCAGGCCTGATCATC+AGG | + | chr5.1:76520628-76520647 | None:intergenic | 60.0% | |
CCTGATGATCAGGCCTGCCT+AGG | - | chr5.1:76520625-76520644 | MS.gene37955:CDS | 60.0% | |
GATGGCCGTAGGTTCAGGTG+CGG | + | chr5.1:76519420-76519439 | None:intergenic | 60.0% | |
GCAACTCCAGCAGTCGCGTT+AGG | + | chr5.1:76520160-76520179 | None:intergenic | 60.0% | |
GCAGCAAAGCCACCATCAGC+AGG | + | chr5.1:76520136-76520155 | None:intergenic | 60.0% | |
GGCGCAACATAAGGTCTCCG+TGG | - | chr5.1:76521096-76521115 | MS.gene37955:CDS | 60.0% | |
GTGAACGTATGTCGCGTGCC+TGG | - | chr5.1:76519501-76519520 | MS.gene37955:intron | 60.0% | |
GTGGTCGTCGAACTGCTGCT+TGG | - | chr5.1:76520982-76521001 | MS.gene37955:CDS | 60.0% | |
TCCACAGGGAACTCGGTCTC+TGG | - | chr5.1:76520334-76520353 | MS.gene37955:CDS | 60.0% | |
TCGAGGATGGCCGTAGGTTC+AGG | + | chr5.1:76519425-76519444 | None:intergenic | 60.0% | |
!! | CCGGATTGAAGTGCCGGACT+AGG | + | chr5.1:76520719-76520738 | None:intergenic | 60.0% |
AGCAAGACCCCCGCCTCTAC+CGG | + | chr5.1:76520838-76520857 | None:intergenic | 65.0% | |
CCAAGCACCACAGGGCGTAG+AGG | + | chr5.1:76520367-76520386 | None:intergenic | 65.0% | |
CCTCTACGCCCTGTGGTGCT+TGG | - | chr5.1:76520364-76520383 | MS.gene37955:CDS | 65.0% | |
GCCGGTAGACCAAGCACCAC+AGG | + | chr5.1:76520376-76520395 | None:intergenic | 65.0% | |
GCTGCTCCTAACGCGACTGC+TGG | - | chr5.1:76520151-76520170 | MS.gene37955:intron | 65.0% | |
GGTGCGGCACAGCAGGGATA+GGG | + | chr5.1:76520105-76520124 | None:intergenic | 65.0% | |
TCTGCTGCCTCTACGCCCTG+TGG | - | chr5.1:76520357-76520376 | MS.gene37955:CDS | 65.0% | |
TGGTGCGGCACAGCAGGGAT+AGG | + | chr5.1:76520106-76520125 | None:intergenic | 65.0% | |
! | GTAGACCGCACCGGTAGAGG+CGG | - | chr5.1:76520825-76520844 | MS.gene37955:CDS | 65.0% |
! | TAGACCGCACCGGTAGAGGC+GGG | - | chr5.1:76520826-76520845 | MS.gene37955:CDS | 65.0% |
! | AGACCGCACCGGTAGAGGCG+GGG | - | chr5.1:76520827-76520846 | MS.gene37955:CDS | 70.0% |
GACCCCCGCCTCTACCGGTG+CGG | + | chr5.1:76520833-76520852 | None:intergenic | 75.0% | |
! | GACCGCACCGGTAGAGGCGG+GGG | - | chr5.1:76520828-76520847 | MS.gene37955:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 76519347 | 76521407 | 76519347 | ID=MS.gene37955 |
chr5.1 | mRNA | 76519347 | 76521407 | 76519347 | ID=MS.gene37955.t1;Parent=MS.gene37955 |
chr5.1 | exon | 76520205 | 76521407 | 76520205 | ID=MS.gene37955.t1.exon1;Parent=MS.gene37955.t1 |
chr5.1 | CDS | 76520205 | 76521407 | 76520205 | ID=cds.MS.gene37955.t1;Parent=MS.gene37955.t1 |
chr5.1 | exon | 76519347 | 76519448 | 76519347 | ID=MS.gene37955.t1.exon2;Parent=MS.gene37955.t1 |
chr5.1 | CDS | 76519347 | 76519448 | 76519347 | ID=cds.MS.gene37955.t1;Parent=MS.gene37955.t1 |
Gene Sequence |
Protein sequence |