Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26433.t1 | RHN78165.1 | 60.8 | 355 | 139 | 0 | 279 | 633 | 44 | 398 | 5.50E-133 | 485 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26433.t1 | A0A396JPN6 | 60.8 | 355 | 139 | 0 | 279 | 633 | 44 | 398 | 4.0e-133 | 485.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26433.t1 | MTR_1g051330 | 46.110 | 527 | 208 | 10 | 159 | 633 | 34 | 536 | 5.65e-145 | 439 |
MS.gene26433.t1 | MTR_6g046587 | 51.211 | 289 | 122 | 4 | 196 | 471 | 1 | 283 | 4.01e-84 | 266 |
MS.gene26433.t1 | MTR_4g020630 | 40.000 | 340 | 195 | 2 | 296 | 634 | 2 | 333 | 3.91e-81 | 265 |
MS.gene26433.t1 | MTR_0042s0130 | 43.253 | 289 | 153 | 3 | 243 | 530 | 47 | 325 | 2.88e-74 | 242 |
MS.gene26433.t1 | MTR_6g034215 | 38.676 | 287 | 153 | 4 | 274 | 557 | 58 | 324 | 1.86e-65 | 218 |
MS.gene26433.t1 | MTR_1g100687 | 48.673 | 226 | 111 | 3 | 305 | 526 | 3 | 227 | 1.99e-65 | 215 |
MS.gene26433.t1 | MTR_8g463110 | 37.374 | 297 | 182 | 2 | 342 | 634 | 101 | 397 | 7.96e-61 | 215 |
MS.gene26433.t1 | MTR_2g018005 | 53.409 | 176 | 77 | 1 | 275 | 445 | 54 | 229 | 3.14e-60 | 201 |
MS.gene26433.t1 | MTR_6g009010 | 44.393 | 214 | 102 | 2 | 279 | 491 | 64 | 261 | 2.83e-58 | 197 |
MS.gene26433.t1 | MTR_2g055450 | 39.552 | 268 | 142 | 4 | 281 | 546 | 99 | 348 | 8.76e-57 | 198 |
MS.gene26433.t1 | MTR_2g078880 | 40.000 | 210 | 109 | 3 | 245 | 452 | 5 | 199 | 8.54e-51 | 175 |
MS.gene26433.t1 | MTR_2g063055 | 61.864 | 118 | 45 | 0 | 469 | 586 | 62 | 179 | 1.31e-47 | 165 |
MS.gene26433.t1 | MTR_6g034715 | 50.000 | 134 | 67 | 0 | 313 | 446 | 3 | 136 | 2.65e-46 | 161 |
MS.gene26433.t1 | MTR_8g470880 | 49.020 | 153 | 73 | 2 | 316 | 465 | 373 | 523 | 2.44e-42 | 160 |
MS.gene26433.t1 | MTR_1g036710 | 39.200 | 250 | 112 | 7 | 116 | 342 | 63 | 295 | 6.36e-40 | 148 |
MS.gene26433.t1 | MTR_3g044860 | 35.371 | 229 | 117 | 4 | 349 | 574 | 3 | 203 | 6.96e-38 | 143 |
MS.gene26433.t1 | MTR_1g036720 | 57.407 | 108 | 46 | 0 | 1 | 108 | 1 | 108 | 4.64e-36 | 131 |
MS.gene26433.t1 | MTR_0114s0080 | 50.476 | 105 | 52 | 0 | 335 | 439 | 20 | 124 | 2.07e-34 | 127 |
MS.gene26433.t1 | MTR_4g044433 | 47.321 | 112 | 59 | 0 | 280 | 391 | 35 | 146 | 7.80e-33 | 124 |
MS.gene26433.t1 | MTR_8g019640 | 27.055 | 292 | 125 | 3 | 336 | 626 | 3 | 207 | 1.07e-30 | 125 |
MS.gene26433.t1 | MTR_0093s0080 | 43.609 | 133 | 53 | 2 | 313 | 445 | 14 | 124 | 5.03e-29 | 112 |
MS.gene26433.t1 | MTR_0010s0370 | 50.893 | 112 | 54 | 1 | 1 | 111 | 1 | 112 | 5.89e-29 | 114 |
MS.gene26433.t1 | MTR_0010s0350 | 50.893 | 112 | 54 | 1 | 1 | 111 | 1 | 112 | 5.89e-29 | 114 |
MS.gene26433.t1 | MTR_8g442690 | 25.767 | 326 | 227 | 6 | 318 | 634 | 49 | 368 | 1.97e-27 | 116 |
MS.gene26433.t1 | MTR_7g057470 | 28.485 | 330 | 191 | 13 | 278 | 585 | 273 | 579 | 1.14e-26 | 115 |
MS.gene26433.t1 | MTR_7g057490 | 28.485 | 330 | 191 | 13 | 278 | 585 | 273 | 579 | 1.14e-26 | 115 |
MS.gene26433.t1 | MTR_2g064335 | 29.412 | 238 | 130 | 4 | 317 | 545 | 14 | 222 | 1.34e-26 | 111 |
MS.gene26433.t1 | MTR_4g033730 | 44.037 | 109 | 61 | 0 | 303 | 411 | 30 | 138 | 4.48e-25 | 101 |
MS.gene26433.t1 | MTR_1g054775 | 26.190 | 294 | 202 | 7 | 279 | 564 | 614 | 900 | 6.53e-25 | 111 |
MS.gene26433.t1 | MTR_5g021380 | 26.385 | 379 | 257 | 13 | 274 | 638 | 563 | 933 | 2.60e-23 | 105 |
MS.gene26433.t1 | MTR_8g069750 | 48.276 | 87 | 45 | 0 | 279 | 365 | 35 | 121 | 1.62e-22 | 98.2 |
MS.gene26433.t1 | MTR_6g016175 | 25.641 | 351 | 220 | 13 | 278 | 616 | 60 | 381 | 2.60e-20 | 95.9 |
MS.gene26433.t1 | MTR_6g048560 | 29.302 | 215 | 135 | 7 | 377 | 580 | 33 | 241 | 2.31e-19 | 88.2 |
MS.gene26433.t1 | MTR_0111s0070 | 26.627 | 338 | 217 | 8 | 287 | 622 | 194 | 502 | 4.08e-19 | 91.7 |
MS.gene26433.t1 | MTR_4g122570 | 29.208 | 202 | 138 | 2 | 375 | 572 | 328 | 528 | 1.50e-18 | 89.7 |
MS.gene26433.t1 | MTR_2g084625 | 39.583 | 96 | 56 | 1 | 316 | 409 | 12 | 107 | 9.72e-17 | 82.4 |
MS.gene26433.t1 | MTR_3g436680 | 28.692 | 237 | 139 | 8 | 387 | 618 | 1 | 212 | 3.82e-16 | 82.4 |
MS.gene26433.t1 | MTR_7g083690 | 23.280 | 378 | 224 | 13 | 268 | 619 | 657 | 994 | 8.68e-16 | 82.0 |
MS.gene26433.t1 | MTR_1g059490 | 22.601 | 323 | 214 | 6 | 277 | 586 | 255 | 554 | 9.25e-16 | 81.3 |
MS.gene26433.t1 | MTR_3g068195 | 26.275 | 255 | 176 | 7 | 377 | 631 | 19 | 261 | 9.85e-16 | 80.9 |
MS.gene26433.t1 | MTR_8g446890 | 32.867 | 143 | 67 | 3 | 332 | 471 | 3 | 119 | 1.46e-15 | 75.1 |
MS.gene26433.t1 | MTR_7g080340 | 57.143 | 56 | 24 | 0 | 323 | 378 | 4 | 59 | 4.46e-15 | 70.5 |
MS.gene26433.t1 | MTR_0044s0090 | 26.500 | 200 | 133 | 6 | 385 | 573 | 9 | 205 | 2.97e-14 | 72.8 |
MS.gene26433.t1 | MTR_8g098280 | 22.945 | 292 | 204 | 6 | 291 | 573 | 90 | 369 | 6.78e-14 | 74.3 |
MS.gene26433.t1 | MTR_7g033160 | 42.029 | 69 | 40 | 0 | 534 | 602 | 4 | 72 | 2.97e-13 | 65.9 |
MS.gene26433.t1 | MTR_0123s0050 | 50.000 | 50 | 25 | 0 | 391 | 440 | 1 | 50 | 4.95e-13 | 65.1 |
MS.gene26433.t1 | MTR_0032s0100 | 33.884 | 121 | 75 | 3 | 334 | 452 | 17 | 134 | 6.16e-13 | 68.2 |
MS.gene26433.t1 | MTR_0112s0060 | 54.717 | 53 | 24 | 0 | 393 | 445 | 56 | 108 | 7.30e-13 | 66.2 |
MS.gene26433.t1 | MTR_7g015270 | 38.043 | 92 | 56 | 1 | 538 | 628 | 84 | 175 | 7.73e-12 | 66.2 |
MS.gene26433.t1 | MTR_7g063500 | 30.435 | 92 | 62 | 1 | 497 | 586 | 38 | 129 | 1.09e-11 | 63.2 |
MS.gene26433.t1 | MTR_2g061500 | 30.000 | 100 | 70 | 0 | 9 | 108 | 11 | 110 | 2.31e-11 | 62.4 |
MS.gene26433.t1 | MTR_5g058210 | 31.677 | 161 | 107 | 3 | 287 | 446 | 35 | 193 | 5.19e-11 | 64.3 |
MS.gene26433.t1 | MTR_3g026390 | 37.143 | 105 | 62 | 2 | 349 | 452 | 42 | 143 | 5.60e-11 | 62.0 |
MS.gene26433.t1 | MTR_0001s0070 | 28.649 | 185 | 109 | 5 | 277 | 448 | 21 | 195 | 7.74e-11 | 62.4 |
MS.gene26433.t1 | MTR_5g069440 | 25.564 | 133 | 95 | 2 | 476 | 607 | 30 | 159 | 9.82e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 179 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGCCAAAACTCAGCTATTT+TGG | 0.178926 | 4.4:-24958723 | None:intergenic |
CAGATGATGGAGCAAGATTC+TGG | 0.217242 | 4.4:+24959239 | MS.gene26433:intron |
CTTCCAATAATGTCACATTA+TGG | 0.218243 | 4.4:-24959528 | None:intergenic |
CCTATCAATGCGTGCTTCTT+TGG | 0.228722 | 4.4:-24960354 | None:intergenic |
TCCCCATAATGTGACATTAT+TGG | 0.247552 | 4.4:+24959525 | MS.gene26433:CDS |
ACTGATGGCCGAATTAAATT+AGG | 0.250201 | 4.4:-24959472 | None:intergenic |
TGATATTAGCAAGGCTGTTT+TGG | 0.263514 | 4.4:-24960748 | None:intergenic |
GCTTCCGTTTCAATAATTCT+TGG | 0.293739 | 4.4:+24960507 | MS.gene26433:CDS |
TGTAGGGATGTTGAGGGATG+TGG | 0.301724 | 4.4:-24959644 | None:intergenic |
CTTTCAGCAGGTGCGCCATC+TGG | 0.305221 | 4.4:-24958884 | None:intergenic |
TACTCCAAGAGGACGCTTAT+TGG | 0.308968 | 4.4:+24960771 | MS.gene26433:CDS |
GTCATCATATGCCCTCTAAT+TGG | 0.319930 | 4.4:-24958698 | None:intergenic |
ATGATCCGGGTAACCGTAAA+AGG | 0.321672 | 4.4:-24960093 | None:intergenic |
CGCCATCTGGGAGAGTATTA+AGG | 0.324867 | 4.4:-24958871 | None:intergenic |
CTCATTTCGTCAAGGACAAT+TGG | 0.329548 | 4.4:+24960549 | MS.gene26433:CDS |
TTAATGTTGACCCCTCTTCC+AGG | 0.331648 | 4.4:-24958746 | None:intergenic |
TTAAATTAGGATTCCTCAAC+AGG | 0.347044 | 4.4:-24959459 | None:intergenic |
TTCCAATAATGTCACATTAT+GGG | 0.356708 | 4.4:-24959527 | None:intergenic |
CGACCCCATTGGCTTATTAG+AGG | 0.357148 | 4.4:+24960239 | MS.gene26433:CDS |
GAACGGATACGTGCAATAAC+TGG | 0.357348 | 4.4:-24961001 | None:intergenic |
CAGCCAAAATAGCTGAGTTT+TGG | 0.361520 | 4.4:+24958720 | MS.gene26433:CDS |
CTTACTGACAAACCAATTAG+AGG | 0.362902 | 4.4:+24958686 | MS.gene26433:CDS |
TCATCACTTAGATGCAAGTT+TGG | 0.365389 | 4.4:-24958584 | None:intergenic |
TGGAAGAGGGGTCAACATTA+AGG | 0.368550 | 4.4:+24958748 | MS.gene26433:CDS |
GTGGCGGCATTGCCGTTCTA+TGG | 0.368724 | 4.4:+24959976 | MS.gene26433:CDS |
TCTCGTTGGCTCCGGGAGGA+AGG | 0.370131 | 4.4:+24959307 | MS.gene26433:CDS |
ATGGTAGACGGCGTGATTCT+TGG | 0.372064 | 4.4:+24960114 | MS.gene26433:CDS |
TGAGGAATCCTAATTTAATT+CGG | 0.381900 | 4.4:+24959464 | MS.gene26433:CDS |
ATAAGCCAATGGGGTCGGTC+GGG | 0.387617 | 4.4:-24960233 | None:intergenic |
GCAGAGGCTCTCGTTGGCTC+CGG | 0.388303 | 4.4:+24959299 | MS.gene26433:CDS |
AAGCTTAGTAACAATGTTGC+TGG | 0.389609 | 4.4:-24960585 | None:intergenic |
TGGCGTGCATGTCTCGATAA+TGG | 0.394297 | 4.4:-24958805 | None:intergenic |
TGTCTGTCGACACGTAATTC+AGG | 0.407943 | 4.4:-24959265 | None:intergenic |
ATGTTGTGAATAATTGATAA+TGG | 0.411167 | 4.4:-24960018 | None:intergenic |
AATTTGAATGTGAAGAGGTT+TGG | 0.411433 | 4.4:-24958779 | None:intergenic |
TGGTAGACGGCGTGATTCTT+GGG | 0.411737 | 4.4:+24960115 | MS.gene26433:CDS |
GTAGGGATGTTGAGGGATGT+GGG | 0.412400 | 4.4:-24959643 | None:intergenic |
GATGACCCCTGGTGTATTAT+CGG | 0.419374 | 4.4:+24960167 | MS.gene26433:CDS |
GACACTAGTGCCAGCCTTGT+GGG | 0.422604 | 4.4:+24958656 | MS.gene26433:CDS |
GAAGTAAGCCACGATCCATT+TGG | 0.423976 | 4.4:-24960905 | None:intergenic |
ACCACTCCTGCCCTTCCTCC+CGG | 0.428167 | 4.4:-24959318 | None:intergenic |
TTGAAACGGAAGCTGTTATG+AGG | 0.430680 | 4.4:-24960497 | None:intergenic |
TAAGCCAATGGGGTCGGTCG+GGG | 0.434320 | 4.4:-24960232 | None:intergenic |
AGATGATGGAGCAAGATTCT+GGG | 0.435604 | 4.4:+24959240 | MS.gene26433:intron |
CATTTCTCCGTAGACTGTAT+TGG | 0.436829 | 4.4:+24959948 | MS.gene26433:intron |
TGCTCCCTCACCTGCTGAAA+CGG | 0.442325 | 4.4:+24959423 | MS.gene26433:CDS |
TTGTTATGCGCAGGTGGTGT+AGG | 0.443145 | 4.4:-24959661 | None:intergenic |
AAAACCTCTAATAAGCCAAT+GGG | 0.443148 | 4.4:-24960243 | None:intergenic |
TTGGCTCCGGGAGGAAGGGC+AGG | 0.444203 | 4.4:+24959312 | MS.gene26433:CDS |
CCAAAGAAGCACGCATTGAT+AGG | 0.444555 | 4.4:+24960354 | MS.gene26433:CDS |
TCTAAATTGCGGCATCCAAA+TGG | 0.450755 | 4.4:+24960890 | MS.gene26433:CDS |
TTATCGATCTTCCTCTCAAC+GGG | 0.452790 | 4.4:+24960291 | MS.gene26433:CDS |
CAGGTTGTTGTCGAAATACC+AGG | 0.462966 | 4.4:-24958843 | None:intergenic |
CTCGTTGGCTCCGGGAGGAA+GGG | 0.467971 | 4.4:+24959308 | MS.gene26433:CDS |
TACGTGCAATAACTGGTTGC+TGG | 0.472488 | 4.4:-24960994 | None:intergenic |
GCTGGTCACCGTTGATTGCT+TGG | 0.473839 | 4.4:-24960976 | None:intergenic |
GCCGCCAATAAGCGTCCTCT+TGG | 0.476482 | 4.4:-24960775 | None:intergenic |
TTGATTGAAATGAGGGTGAT+TGG | 0.478397 | 4.4:-24960645 | None:intergenic |
CAGAGGCTCTCGTTGGCTCC+GGG | 0.479133 | 4.4:+24959300 | MS.gene26433:CDS |
GCGTGACCGTTACCGTTAGC+TGG | 0.481249 | 4.4:-24959391 | None:intergenic |
TGAGGGGCACGCCATGGAGG+TGG | 0.486413 | 4.4:-24960479 | None:intergenic |
CACCGTTGATTGCTTGGAAG+AGG | 0.491478 | 4.4:-24960970 | None:intergenic |
TTTAGTGTTCACAACGTCCA+TGG | 0.495128 | 4.4:-24959698 | None:intergenic |
TTTCAGCAGGTGCGCCATCT+GGG | 0.498288 | 4.4:-24958883 | None:intergenic |
TCACGCCGTCTACCATGATC+CGG | 0.498782 | 4.4:-24960107 | None:intergenic |
AATAAGCCAATGGGGTCGGT+CGG | 0.500265 | 4.4:-24960234 | None:intergenic |
GTAATATTATTAATCATGTC+AGG | 0.508341 | 4.4:-24961967 | None:intergenic |
CTAGTGTCTGCAGTATCATC+AGG | 0.515492 | 4.4:-24958641 | None:intergenic |
CTTGCATCTAAGTGATGAAG+AGG | 0.517251 | 4.4:+24958589 | MS.gene26433:CDS |
ATGCTCTTGAACCAAGTGAA+TGG | 0.519001 | 4.4:-24960317 | None:intergenic |
ACCTTTGACAGGGTCCTGAA+TGG | 0.522098 | 4.4:-24960054 | None:intergenic |
TCATCAGGAAAACCCTCGAT+TGG | 0.522180 | 4.4:-24958626 | None:intergenic |
ATGAGGGAACAATTCCAGCC+AGG | 0.522359 | 4.4:-24960393 | None:intergenic |
AGACGCCAAGGACCTTTGAC+AGG | 0.525837 | 4.4:-24960065 | None:intergenic |
TAGTAACAATGTTGCTGGAA+GGG | 0.526260 | 4.4:-24960580 | None:intergenic |
GGAGAGTATTAAGGATCAGC+AGG | 0.529050 | 4.4:-24958862 | None:intergenic |
TCCGGGAGGAAGGGCAGGAG+TGG | 0.530112 | 4.4:+24959317 | MS.gene26433:CDS |
GGGGCCCCGACCGACCCCAT+TGG | 0.533394 | 4.4:+24960228 | MS.gene26433:CDS |
AAGAAATCTTCCCACAAGGC+TGG | 0.535154 | 4.4:-24958666 | None:intergenic |
TCCAATAATGTCACATTATG+GGG | 0.536540 | 4.4:-24959526 | None:intergenic |
GACTGAGTGTTGTTATGCGC+AGG | 0.538388 | 4.4:-24959670 | None:intergenic |
TTACTGACAAACCAATTAGA+GGG | 0.539577 | 4.4:+24958687 | MS.gene26433:CDS |
TGCAGCTTGATCCACCTCCA+TGG | 0.541270 | 4.4:+24960468 | MS.gene26433:CDS |
GAAAACCTCTAATAAGCCAA+TGG | 0.541947 | 4.4:-24960244 | None:intergenic |
AACTCAGTATCAAAGACTGC+AGG | 0.545634 | 4.4:+24959352 | MS.gene26433:CDS |
GCTAAAGTGACCGTTTCAGC+AGG | 0.546033 | 4.4:-24959433 | None:intergenic |
TCACTTTAGCTGACCTGTTG+AGG | 0.547636 | 4.4:+24959446 | MS.gene26433:CDS |
TGTAGTGGTACACTTTCAGC+AGG | 0.549431 | 4.4:-24958896 | None:intergenic |
GGAAGAATTTGAATGTGAAG+AGG | 0.549642 | 4.4:-24958784 | None:intergenic |
TAATGTGACATTATTGGAAG+AGG | 0.554149 | 4.4:+24959531 | MS.gene26433:CDS |
TCAGCCAAGAATTATTGAAA+CGG | 0.555172 | 4.4:-24960511 | None:intergenic |
CGTTGAGAGGAAGATCGATA+AGG | 0.555201 | 4.4:-24960289 | None:intergenic |
CTCTAATAAGCCAATGGGGT+CGG | 0.556799 | 4.4:-24960238 | None:intergenic |
AGGACCCTGTCAAAGGTCCT+TGG | 0.557180 | 4.4:+24960060 | MS.gene26433:CDS |
TCCAAGAGGACGCTTATTGG+CGG | 0.558098 | 4.4:+24960774 | MS.gene26433:CDS |
TGAGGGAACAATTCCAGCCA+GGG | 0.558112 | 4.4:-24960392 | None:intergenic |
TTAGTAACAATGTTGCTGGA+AGG | 0.558744 | 4.4:-24960581 | None:intergenic |
GTTGATCCAGCTAACGGTAA+CGG | 0.559014 | 4.4:+24959385 | MS.gene26433:CDS |
TGTTATGCGCAGGTGGTGTA+GGG | 0.561992 | 4.4:-24959660 | None:intergenic |
CTGTTATGAGGGGCACGCCA+TGG | 0.562108 | 4.4:-24960485 | None:intergenic |
TTAGTGTTCACAACGTCCAT+GGG | 0.562308 | 4.4:-24959697 | None:intergenic |
GACGAGATGAAGCTGTCAAG+TGG | 0.563212 | 4.4:-24960850 | None:intergenic |
AGACAGAAGAACGAAGGCAG+AGG | 0.566265 | 4.4:+24959283 | MS.gene26433:CDS |
GAACTTGAGATTCCAATCGA+GGG | 0.567825 | 4.4:+24958614 | MS.gene26433:CDS |
ATAGTCAGTCAGATGACCCC+TGG | 0.567926 | 4.4:+24960156 | MS.gene26433:CDS |
TGTTTGCGTTGATTGAAATG+AGG | 0.569484 | 4.4:-24960653 | None:intergenic |
TTATTCACAGTAACACAAAA+CGG | 0.569681 | 4.4:+24959566 | MS.gene26433:CDS |
AGGTGGTGTAGGGATGTTGA+GGG | 0.573689 | 4.4:-24959650 | None:intergenic |
TGAAACGGAAGCTGTTATGA+GGG | 0.574121 | 4.4:-24960496 | None:intergenic |
GATGATGGAGCAAGATTCTG+GGG | 0.576618 | 4.4:+24959241 | MS.gene26433:intron |
GGCCTCTTCCAAGCAATCAA+CGG | 0.577817 | 4.4:+24960968 | MS.gene26433:CDS |
GGACATGAAGCATTGGAGCA+AGG | 0.577896 | 4.4:+24960622 | MS.gene26433:CDS |
TAGGGATGTTGAGGGATGTG+GGG | 0.579285 | 4.4:-24959642 | None:intergenic |
GAAGTCTCCGATAATACACC+AGG | 0.579399 | 4.4:-24960174 | None:intergenic |
GTTTGCGTTGATTGAAATGA+GGG | 0.580974 | 4.4:-24960652 | None:intergenic |
TCCATTCAGGACCCTGTCAA+AGG | 0.581412 | 4.4:+24960053 | MS.gene26433:CDS |
CAAGTTTGGCAGTGATGTCA+TGG | 0.582297 | 4.4:-24958570 | None:intergenic |
CATTCTCTGTTACACGTGAA+CGG | 0.582431 | 4.4:-24961018 | None:intergenic |
TCAACGGGTATCCATTCACT+TGG | 0.582482 | 4.4:+24960306 | MS.gene26433:CDS |
GTCTTTGATACTGAGTTAGA+CGG | 0.582949 | 4.4:-24959346 | None:intergenic |
AAAGTTTGCAGCGTGACATG+AGG | 0.583151 | 4.4:-24960410 | None:intergenic |
AGCGGTGTGTGGTCAGACAT+AGG | 0.585161 | 4.4:-24960440 | None:intergenic |
TGCTGTTTAATGCATACTGA+TGG | 0.585460 | 4.4:-24959487 | None:intergenic |
TCACGCTCAGACTTGAATGA+AGG | 0.587236 | 4.4:+24959589 | MS.gene26433:CDS |
TGCAGAATTTCGCCATAGAA+CGG | 0.587272 | 4.4:-24959988 | None:intergenic |
GCATCGAGGACATGAAGCAT+TGG | 0.590059 | 4.4:+24960615 | MS.gene26433:CDS |
AGACACTAGTGCCAGCCTTG+TGG | 0.592106 | 4.4:+24958655 | MS.gene26433:CDS |
AGTGACCGTTTCAGCAGGTG+AGG | 0.592767 | 4.4:-24959428 | None:intergenic |
CAGGTGGTGTAGGGATGTTG+AGG | 0.593323 | 4.4:-24959651 | None:intergenic |
AGAACTTGAGATTCCAATCG+AGG | 0.595351 | 4.4:+24958613 | MS.gene26433:CDS |
CTTATCGATCTTCCTCTCAA+CGG | 0.595581 | 4.4:+24960290 | MS.gene26433:CDS |
TGGATCAGCTGAAGCATCTG+AGG | 0.600311 | 4.4:-24960711 | None:intergenic |
TGATCTTGCTCATTTCGTCA+AGG | 0.601537 | 4.4:+24960541 | MS.gene26433:CDS |
CACGCCGTCTACCATGATCC+GGG | 0.601857 | 4.4:-24960106 | None:intergenic |
ACGAAGGCAGAGGCTCTCGT+TGG | 0.606347 | 4.4:+24959293 | MS.gene26433:CDS |
AGCATCTGAGGTGGTGCGCA+TGG | 0.608380 | 4.4:-24960699 | None:intergenic |
AAAATACTATCTCTAAATTG+CGG | 0.608838 | 4.4:+24960879 | MS.gene26433:CDS |
GACTGTATTGGTCGTAGTGG+CGG | 0.609958 | 4.4:+24959960 | MS.gene26433:intron |
TGCTAATATCATACTCCAAG+AGG | 0.613520 | 4.4:+24960760 | MS.gene26433:CDS |
ATCCTTAATACTCTCCCAGA+TGG | 0.615323 | 4.4:+24958869 | MS.gene26433:CDS |
CTATCTCCTTCCGACAAACG+AGG | 0.617973 | 4.4:+24960206 | MS.gene26433:CDS |
TGACAGCTTCATCTCGTCGT+CGG | 0.618045 | 4.4:+24960855 | MS.gene26433:CDS |
GTGAATGGATACCCGTTGAG+AGG | 0.618731 | 4.4:-24960302 | None:intergenic |
ACATTATGGGGAGATAAATG+AGG | 0.619257 | 4.4:-24959514 | None:intergenic |
CATTATGGGGAGATAAATGA+GGG | 0.622308 | 4.4:-24959513 | None:intergenic |
CTTGGAGTATGATATTAGCA+AGG | 0.623260 | 4.4:-24960757 | None:intergenic |
TTCACTTGGTTCAAGAGCAT+AGG | 0.625497 | 4.4:+24960320 | MS.gene26433:CDS |
GTTTCAGTTGATCCAGCTAA+CGG | 0.626018 | 4.4:+24959379 | MS.gene26433:CDS |
CAACACTCAGTCAACACCCA+TGG | 0.626429 | 4.4:+24959681 | MS.gene26433:CDS |
CAGTAAGAAATCTTCCCACA+AGG | 0.626909 | 4.4:-24958670 | None:intergenic |
TATCTCCTTCCGACAAACGA+GGG | 0.627918 | 4.4:+24960207 | MS.gene26433:CDS |
TAAAAGGCAGTGAGACGCCA+AGG | 0.630350 | 4.4:-24960077 | None:intergenic |
GTGACCGTTTCAGCAGGTGA+GGG | 0.639777 | 4.4:-24959427 | None:intergenic |
GGATCAAGCTGCAAGAGAAG+CGG | 0.643097 | 4.4:-24960458 | None:intergenic |
AGGCTCTCGTTGGCTCCGGG+AGG | 0.643567 | 4.4:+24959303 | MS.gene26433:CDS |
AAGTTTGCAGCGTGACATGA+GGG | 0.645883 | 4.4:-24960409 | None:intergenic |
ATCTCCTTCCGACAAACGAG+GGG | 0.653560 | 4.4:+24960208 | MS.gene26433:CDS |
GTAGACTGTATTGGTCGTAG+TGG | 0.654797 | 4.4:+24959957 | MS.gene26433:intron |
TTATGAGGGGCACGCCATGG+AGG | 0.654878 | 4.4:-24960482 | None:intergenic |
TGCGGCATCCAAATGGATCG+TGG | 0.655524 | 4.4:+24960897 | MS.gene26433:CDS |
TGAGTGTTGTTATGCGCAGG+TGG | 0.658508 | 4.4:-24959667 | None:intergenic |
GCTGCAAGAGAAGCGGTGTG+TGG | 0.668133 | 4.4:-24960451 | None:intergenic |
ATCAGCTGAAGCATCTGAGG+TGG | 0.685205 | 4.4:-24960708 | None:intergenic |
GTCGACAGACAGAAGAACGA+AGG | 0.685628 | 4.4:+24959277 | MS.gene26433:CDS |
GAAACGGAAGCTGTTATGAG+GGG | 0.696784 | 4.4:-24960495 | None:intergenic |
GACGCCAAGGACCTTTGACA+GGG | 0.699692 | 4.4:-24960064 | None:intergenic |
GAGGGAACAATTCCAGCCAG+GGG | 0.705589 | 4.4:-24960391 | None:intergenic |
TAAGCTTACTTACTGCATCG+AGG | 0.708490 | 4.4:+24960601 | MS.gene26433:CDS |
AGGGAACAATTCCAGCCAGG+GGG | 0.713127 | 4.4:-24960390 | None:intergenic |
AGGTTGTTGTCGAAATACCA+GGG | 0.714795 | 4.4:-24958842 | None:intergenic |
TCTCCTTCCGACAAACGAGG+GGG | 0.716926 | 4.4:+24960209 | MS.gene26433:CDS |
AAGTCTCCGATAATACACCA+GGG | 0.717431 | 4.4:-24960173 | None:intergenic |
TTTGATACTGAGTTAGACGG+CGG | 0.717972 | 4.4:-24959343 | None:intergenic |
TTATGGGGAGATAAATGAGG+GGG | 0.720712 | 4.4:-24959511 | None:intergenic |
GTTACCCGGATCATGGTAGA+CGG | 0.730001 | 4.4:+24960102 | MS.gene26433:CDS |
ATGATGGAGCAAGATTCTGG+GGG | 0.734554 | 4.4:+24959242 | MS.gene26433:CDS |
AAACCTCTAATAAGCCAATG+GGG | 0.748894 | 4.4:-24960242 | None:intergenic |
AGTCTCCGATAATACACCAG+GGG | 0.753819 | 4.4:-24960172 | None:intergenic |
ATTATGGGGAGATAAATGAG+GGG | 0.777929 | 4.4:-24959512 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGTAATAATAATAAAATTTC+TGG | + | chr4.4:24959897-24959916 | MS.gene26433:intron | 10.0% |
!! | ATATAAAGTTACCAATTAAA+GGG | - | chr4.4:24961363-24961382 | None:intergenic | 15.0% |
!! | AAAATACTATCTCTAAATTG+CGG | + | chr4.4:24960879-24960898 | MS.gene26433:CDS | 20.0% |
!! | ATGTTGTGAATAATTGATAA+TGG | - | chr4.4:24960021-24960040 | None:intergenic | 20.0% |
!! | GATATAAAGTTACCAATTAA+AGG | - | chr4.4:24961364-24961383 | None:intergenic | 20.0% |
!! | TATTACATAAAGTCTCAATA+AGG | - | chr4.4:24959884-24959903 | None:intergenic | 20.0% |
!!! | AATTGGTAACTTTATATCAT+CGG | + | chr4.4:24961366-24961385 | MS.gene26433:intron | 20.0% |
!!! | CAATTTTTTTGGAATGATAT+TGG | + | chr4.4:24961151-24961170 | MS.gene26433:intron | 20.0% |
!!! | TTTTATAAATATGTCCATTC+AGG | + | chr4.4:24960040-24960059 | MS.gene26433:CDS | 20.0% |
! | CAAAAAAATTGATAAAAGCC+CGG | - | chr4.4:24961142-24961161 | None:intergenic | 25.0% |
! | TGAGGAATCCTAATTTAATT+CGG | + | chr4.4:24959464-24959483 | MS.gene26433:CDS | 25.0% |
! | TTATTCACAGTAACACAAAA+CGG | + | chr4.4:24959566-24959585 | MS.gene26433:CDS | 25.0% |
! | TTCCAATAATGTCACATTAT+GGG | - | chr4.4:24959530-24959549 | None:intergenic | 25.0% |
!! | GGAAATTTTTGTTACTATTG+TGG | + | chr4.4:24959166-24959185 | MS.gene26433:intron | 25.0% |
!! | GTTGAAACTTGATATTTCTA+AGG | + | chr4.4:24961498-24961517 | MS.gene26433:intron | 25.0% |
!! | TTATCTCTACATAATTTGTG+CGG | + | chr4.4:24961705-24961724 | MS.gene26433:intron | 25.0% |
!!! | AACTAGTGTGTCTTTTTTAT+CGG | + | chr4.4:24959729-24959748 | MS.gene26433:intron | 25.0% |
AAAACCTCTAATAAGCCAAT+GGG | - | chr4.4:24960246-24960265 | None:intergenic | 30.0% | |
AAATTCAAATACGAACGCTT+AGG | + | chr4.4:24959145-24959164 | MS.gene26433:intron | 30.0% | |
AACACATGAGAATATCTTTG+AGG | - | chr4.4:24961879-24961898 | None:intergenic | 30.0% | |
AATTTGAATGTGAAGAGGTT+TGG | - | chr4.4:24958782-24958801 | None:intergenic | 30.0% | |
CTTCCAATAATGTCACATTA+TGG | - | chr4.4:24959531-24959550 | None:intergenic | 30.0% | |
GCACAAATTATGTAGAGATA+AGG | - | chr4.4:24961706-24961725 | None:intergenic | 30.0% | |
TAAAAAAGACACACTAGTTG+AGG | - | chr4.4:24959728-24959747 | None:intergenic | 30.0% | |
TAAAGTTACCAATTAAAGGG+CGG | - | chr4.4:24961360-24961379 | None:intergenic | 30.0% | |
TAATGTGACATTATTGGAAG+AGG | + | chr4.4:24959531-24959550 | MS.gene26433:CDS | 30.0% | |
TCAATAAGGATAACAATGTC+CGG | - | chr4.4:24959870-24959889 | None:intergenic | 30.0% | |
TCAGCCAAGAATTATTGAAA+CGG | - | chr4.4:24960514-24960533 | None:intergenic | 30.0% | |
TCCAATAATGTCACATTATG+GGG | - | chr4.4:24959529-24959548 | None:intergenic | 30.0% | |
TTAAATTAGGATTCCTCAAC+AGG | - | chr4.4:24959462-24959481 | None:intergenic | 30.0% | |
TTACTGACAAACCAATTAGA+GGG | + | chr4.4:24958687-24958706 | MS.gene26433:CDS | 30.0% | |
! | ATTACCACATCCTTTTCAAT+GGG | + | chr4.4:24961623-24961642 | MS.gene26433:intron | 30.0% |
! | CGGGCTTTTATCAATTTTTT+TGG | + | chr4.4:24961140-24961159 | MS.gene26433:intron | 30.0% |
! | GATGATGATGTGTATTACTT+CGG | + | chr4.4:24961597-24961616 | MS.gene26433:intron | 30.0% |
!! | ATCTTTGAGGCAATTTACTT+CGG | - | chr4.4:24961866-24961885 | None:intergenic | 30.0% |
!! | CACATCCATGATTATTTTTC+TGG | + | chr4.4:24960947-24960966 | MS.gene26433:CDS | 30.0% |
!! | CTTTGGAGATAATTTTGTAG+AGG | - | chr4.4:24961321-24961340 | None:intergenic | 30.0% |
AAACCTCTAATAAGCCAATG+GGG | - | chr4.4:24960245-24960264 | None:intergenic | 35.0% | |
AAGCTTAGTAACAATGTTGC+TGG | - | chr4.4:24960588-24960607 | None:intergenic | 35.0% | |
ACATTATGGGGAGATAAATG+AGG | - | chr4.4:24959517-24959536 | None:intergenic | 35.0% | |
ACTGATGGCCGAATTAAATT+AGG | - | chr4.4:24959475-24959494 | None:intergenic | 35.0% | |
AGAGGCCAGAAAAATAATCA+TGG | - | chr4.4:24960955-24960974 | None:intergenic | 35.0% | |
ATGTCAACAAACCACTCAAA+AGG | + | chr4.4:24959080-24959099 | MS.gene26433:intron | 35.0% | |
ATGTGTTACGAAAATGCTTC+TGG | + | chr4.4:24961892-24961911 | MS.gene26433:intron | 35.0% | |
ATTATGGGGAGATAAATGAG+GGG | - | chr4.4:24959515-24959534 | None:intergenic | 35.0% | |
CATTATGGGGAGATAAATGA+GGG | - | chr4.4:24959516-24959535 | None:intergenic | 35.0% | |
CCACAGGAATATCATGAATT+CGG | - | chr4.4:24958940-24958959 | None:intergenic | 35.0% | |
CGAATTCATGATATTCCTGT+GGG | + | chr4.4:24958938-24958957 | MS.gene26433:intron | 35.0% | |
CTTACTGACAAACCAATTAG+AGG | + | chr4.4:24958686-24958705 | MS.gene26433:CDS | 35.0% | |
CTTGGAGTATGATATTAGCA+AGG | - | chr4.4:24960760-24960779 | None:intergenic | 35.0% | |
GAAAACCTCTAATAAGCCAA+TGG | - | chr4.4:24960247-24960266 | None:intergenic | 35.0% | |
GAATTCATGATATTCCTGTG+GGG | + | chr4.4:24958939-24958958 | MS.gene26433:intron | 35.0% | |
GAATTTCATTGGGGAATTTC+TGG | + | chr4.4:24958994-24959013 | MS.gene26433:intron | 35.0% | |
GCTTCCGTTTCAATAATTCT+TGG | + | chr4.4:24960507-24960526 | MS.gene26433:CDS | 35.0% | |
GGAAGAATTTGAATGTGAAG+AGG | - | chr4.4:24958787-24958806 | None:intergenic | 35.0% | |
GTCTTTGATACTGAGTTAGA+CGG | - | chr4.4:24959349-24959368 | None:intergenic | 35.0% | |
TAGTAACAATGTTGCTGGAA+GGG | - | chr4.4:24960583-24960602 | None:intergenic | 35.0% | |
TATTCTGTCAACTCAGATGA+TGG | + | chr4.4:24959226-24959245 | MS.gene26433:intron | 35.0% | |
TCATCACTTAGATGCAAGTT+TGG | - | chr4.4:24958587-24958606 | None:intergenic | 35.0% | |
TCCCCATAATGTGACATTAT+TGG | + | chr4.4:24959525-24959544 | MS.gene26433:CDS | 35.0% | |
TGCTAATATCATACTCCAAG+AGG | + | chr4.4:24960760-24960779 | MS.gene26433:CDS | 35.0% | |
TTAGTAACAATGTTGCTGGA+AGG | - | chr4.4:24960584-24960603 | None:intergenic | 35.0% | |
TTAGTTGGAGCTACTTACAA+GGG | + | chr4.4:24961533-24961552 | MS.gene26433:intron | 35.0% | |
TTGAACTCATCAACAGAGAA+TGG | - | chr4.4:24961064-24961083 | None:intergenic | 35.0% | |
TTGATTGAAATGAGGGTGAT+TGG | - | chr4.4:24960648-24960667 | None:intergenic | 35.0% | |
! | ATGCCAAAACTCAGCTATTT+TGG | - | chr4.4:24958726-24958745 | None:intergenic | 35.0% |
! | ATTTTCTTCTGCCTTTTGAG+TGG | - | chr4.4:24959094-24959113 | None:intergenic | 35.0% |
! | CATATGATGGAGGATTTCAA+AGG | - | chr4.4:24961443-24961462 | None:intergenic | 35.0% |
! | GATTACCACATCCTTTTCAA+TGG | + | chr4.4:24961622-24961641 | MS.gene26433:intron | 35.0% |
! | TCTGGTTTGAAGTATTCGAT+TGG | + | chr4.4:24959915-24959934 | MS.gene26433:intron | 35.0% |
! | TGATATTAGCAAGGCTGTTT+TGG | - | chr4.4:24960751-24960770 | None:intergenic | 35.0% |
! | TGCTGTTTAATGCATACTGA+TGG | - | chr4.4:24959490-24959509 | None:intergenic | 35.0% |
! | TTACCACATCCTTTTCAATG+GGG | + | chr4.4:24961624-24961643 | MS.gene26433:intron | 35.0% |
! | TTTGCGATCAATGGATTTCT+TGG | + | chr4.4:24961575-24961594 | MS.gene26433:intron | 35.0% |
! | TTTGTGTCATTGAGATGAGT+CGG | - | chr4.4:24961226-24961245 | None:intergenic | 35.0% |
!! | AAATGGGTTTTTGCGATCAA+TGG | + | chr4.4:24961566-24961585 | MS.gene26433:intron | 35.0% |
!! | GTTTGCGTTGATTGAAATGA+GGG | - | chr4.4:24960655-24960674 | None:intergenic | 35.0% |
!! | TGTTTGCGTTGATTGAAATG+AGG | - | chr4.4:24960656-24960675 | None:intergenic | 35.0% |
!! | TTTTCAGTTCAGCTTGTTCT+TGG | + | chr4.4:24961182-24961201 | MS.gene26433:intron | 35.0% |
!!! | AATACCAGGGACCTTTTTTT+AGG | - | chr4.4:24958832-24958851 | None:intergenic | 35.0% |
!!! | TTCAAAAGTTTTCTGGCTGA+AGG | + | chr4.4:24960802-24960821 | MS.gene26433:CDS | 35.0% |
AAAGACCTGGGGAATTTCAT+TGG | + | chr4.4:24958983-24959002 | MS.gene26433:intron | 40.0% | |
AAAGAGTAGGAAAAGACCTG+GGG | + | chr4.4:24958972-24958991 | MS.gene26433:intron | 40.0% | |
AACATTGTTCTTGCACCCAA+AGG | + | chr4.4:24961244-24961263 | MS.gene26433:intron | 40.0% | |
AACTCAGTATCAAAGACTGC+AGG | + | chr4.4:24959352-24959371 | MS.gene26433:CDS | 40.0% | |
AAGACCTGGGGAATTTCATT+GGG | + | chr4.4:24958984-24959003 | MS.gene26433:intron | 40.0% | |
AAGTCTCCGATAATACACCA+GGG | - | chr4.4:24960176-24960195 | None:intergenic | 40.0% | |
ACAAGGGGTTATGCACAAAA+TGG | + | chr4.4:24961549-24961568 | MS.gene26433:intron | 40.0% | |
ACGGACAAGGTCTTTAATAC+AGG | - | chr4.4:24959838-24959857 | None:intergenic | 40.0% | |
ACTACAATCAGTTCCGTTCT+GGG | + | chr4.4:24958913-24958932 | MS.gene26433:intron | 40.0% | |
ACTACGACCAATACAGTCTA+CGG | - | chr4.4:24959958-24959977 | None:intergenic | 40.0% | |
AGAAAGAGTAGGAAAAGACC+TGG | + | chr4.4:24958970-24958989 | MS.gene26433:intron | 40.0% | |
AGAACTTGAGATTCCAATCG+AGG | + | chr4.4:24958613-24958632 | MS.gene26433:CDS | 40.0% | |
AGAAGAAAATCAAGCGTCCA+GGG | + | chr4.4:24959104-24959123 | MS.gene26433:intron | 40.0% | |
AGGTTGTTGTCGAAATACCA+GGG | - | chr4.4:24958845-24958864 | None:intergenic | 40.0% | |
ATCCTTAATACTCTCCCAGA+TGG | + | chr4.4:24958869-24958888 | MS.gene26433:CDS | 40.0% | |
ATGCACGCCATCCTAAAAAA+AGG | + | chr4.4:24958818-24958837 | MS.gene26433:CDS | 40.0% | |
ATGCTCTTGAACCAAGTGAA+TGG | - | chr4.4:24960320-24960339 | None:intergenic | 40.0% | |
ATGTAGAGATAAGGTGAGAG+AGG | - | chr4.4:24961697-24961716 | None:intergenic | 40.0% | |
CAACACACGAATACGCATAT+AGG | - | chr4.4:24959056-24959075 | None:intergenic | 40.0% | |
CAAGGGGTTATGCACAAAAT+GGG | + | chr4.4:24961550-24961569 | MS.gene26433:intron | 40.0% | |
CAATACAGTCTACGGAGAAA+TGG | - | chr4.4:24959950-24959969 | None:intergenic | 40.0% | |
CAATGTCCGGTTTATAGACA+CGG | - | chr4.4:24959857-24959876 | None:intergenic | 40.0% | |
CAGTAAGAAATCTTCCCACA+AGG | - | chr4.4:24958673-24958692 | None:intergenic | 40.0% | |
CATAGCCTTCAGCAAAAACA+CGG | + | chr4.4:24961942-24961961 | MS.gene26433:intron | 40.0% | |
CATTCTCTGTTACACGTGAA+CGG | - | chr4.4:24961021-24961040 | None:intergenic | 40.0% | |
CATTTCTCCGTAGACTGTAT+TGG | + | chr4.4:24959948-24959967 | MS.gene26433:intron | 40.0% | |
CCGAATTCATGATATTCCTG+TGG | + | chr4.4:24958937-24958956 | MS.gene26433:intron | 40.0% | |
CGGACAAGGTCTTTAATACA+GGG | - | chr4.4:24959837-24959856 | None:intergenic | 40.0% | |
CTCATTTCGTCAAGGACAAT+TGG | + | chr4.4:24960549-24960568 | MS.gene26433:CDS | 40.0% | |
CTGGAGTATGACGTCAAAAA+CGG | + | chr4.4:24959013-24959032 | MS.gene26433:intron | 40.0% | |
CTTATCGATCTTCCTCTCAA+CGG | + | chr4.4:24960290-24960309 | MS.gene26433:CDS | 40.0% | |
CTTGCATCTAAGTGATGAAG+AGG | + | chr4.4:24958589-24958608 | MS.gene26433:CDS | 40.0% | |
GAAAGAGTAGGAAAAGACCT+GGG | + | chr4.4:24958971-24958990 | MS.gene26433:intron | 40.0% | |
GAACTTGAGATTCCAATCGA+GGG | + | chr4.4:24958614-24958633 | MS.gene26433:CDS | 40.0% | |
GGGTTTATGACAGAAAGAGT+AGG | + | chr4.4:24958959-24958978 | MS.gene26433:intron | 40.0% | |
GTCATCATATGCCCTCTAAT+TGG | - | chr4.4:24958701-24958720 | None:intergenic | 40.0% | |
GTTAGTTGGAGCTACTTACA+AGG | + | chr4.4:24961532-24961551 | MS.gene26433:intron | 40.0% | |
GTTCCAGGCTATAACATTCA+TGG | - | chr4.4:24959784-24959803 | None:intergenic | 40.0% | |
GTTTCAGTTGATCCAGCTAA+CGG | + | chr4.4:24959379-24959398 | MS.gene26433:CDS | 40.0% | |
TAAGCTTACTTACTGCATCG+AGG | + | chr4.4:24960601-24960620 | MS.gene26433:CDS | 40.0% | |
TAGTTGGAGCTACTTACAAG+GGG | + | chr4.4:24961534-24961553 | MS.gene26433:intron | 40.0% | |
TCTAAATTGCGGCATCCAAA+TGG | + | chr4.4:24960890-24960909 | MS.gene26433:CDS | 40.0% | |
TGAAACGGAAGCTGTTATGA+GGG | - | chr4.4:24960499-24960518 | None:intergenic | 40.0% | |
TGAGGCAATTTACTTCGGTT+GGG | - | chr4.4:24961861-24961880 | None:intergenic | 40.0% | |
TGATCTTGCTCATTTCGTCA+AGG | + | chr4.4:24960541-24960560 | MS.gene26433:CDS | 40.0% | |
TGCAAGCACAAAGGTAATAC+AGG | + | chr4.4:24961466-24961485 | MS.gene26433:intron | 40.0% | |
TGCAGAATTTCGCCATAGAA+CGG | - | chr4.4:24959991-24960010 | None:intergenic | 40.0% | |
TGTAGAGATAAGGTGAGAGA+GGG | - | chr4.4:24961696-24961715 | None:intergenic | 40.0% | |
TGTTACTATTGTGGAGCTCT+TGG | + | chr4.4:24959175-24959194 | MS.gene26433:intron | 40.0% | |
TTAGTGTTCACAACGTCCAT+GGG | - | chr4.4:24959700-24959719 | None:intergenic | 40.0% | |
TTATCGATCTTCCTCTCAAC+GGG | + | chr4.4:24960291-24960310 | MS.gene26433:CDS | 40.0% | |
TTATGGGGAGATAAATGAGG+GGG | - | chr4.4:24959514-24959533 | None:intergenic | 40.0% | |
TTGAAACGGAAGCTGTTATG+AGG | - | chr4.4:24960500-24960519 | None:intergenic | 40.0% | |
TTGAGGCAATTTACTTCGGT+TGG | - | chr4.4:24961862-24961881 | None:intergenic | 40.0% | |
TTTAGTGTTCACAACGTCCA+TGG | - | chr4.4:24959701-24959720 | None:intergenic | 40.0% | |
TTTGATACTGAGTTAGACGG+CGG | - | chr4.4:24959346-24959365 | None:intergenic | 40.0% | |
! | ACTTACCGAAGTTTAGAGCT+TGG | - | chr4.4:24961918-24961937 | None:intergenic | 40.0% |
! | CAGCCAAAATAGCTGAGTTT+TGG | + | chr4.4:24958720-24958739 | MS.gene26433:CDS | 40.0% |
! | CTCTACATAATTTGTGCGGA+AGG | + | chr4.4:24961709-24961728 | MS.gene26433:intron | 40.0% |
! | GGCAACGTTCAAAAGTTTTC+TGG | + | chr4.4:24960795-24960814 | MS.gene26433:CDS | 40.0% |
! | TTATCCATGATGGAACGTGA+GGG | - | chr4.4:24961409-24961428 | None:intergenic | 40.0% |
! | TTCACTTGGTTCAAGAGCAT+AGG | + | chr4.4:24960320-24960339 | MS.gene26433:CDS | 40.0% |
! | TTGTGTCATTGAGATGAGTC+GGG | - | chr4.4:24961225-24961244 | None:intergenic | 40.0% |
!! | AGATGATGGAGCAAGATTCT+GGG | + | chr4.4:24959240-24959259 | MS.gene26433:intron | 40.0% |
!!! | AAAGTTTTCTGGCTGAAGGA+CGG | + | chr4.4:24960806-24960825 | MS.gene26433:CDS | 40.0% |
AAAGTTTGCAGCGTGACATG+AGG | - | chr4.4:24960413-24960432 | None:intergenic | 45.0% | |
AAGAAAATCAAGCGTCCAGG+GGG | + | chr4.4:24959106-24959125 | MS.gene26433:intron | 45.0% | |
AAGAAATCTTCCCACAAGGC+TGG | - | chr4.4:24958669-24958688 | None:intergenic | 45.0% | |
AAGTTTGCAGCGTGACATGA+GGG | - | chr4.4:24960412-24960431 | None:intergenic | 45.0% | |
AGACCTGGGGAATTTCATTG+GGG | + | chr4.4:24958985-24959004 | MS.gene26433:intron | 45.0% | |
AGGACGTTGCACAAAGAGAT+AGG | - | chr4.4:24961301-24961320 | None:intergenic | 45.0% | |
AGGCCTTTGACAGTGTTAGT+TGG | + | chr4.4:24961518-24961537 | MS.gene26433:intron | 45.0% | |
AGTCTCCGATAATACACCAG+GGG | - | chr4.4:24960175-24960194 | None:intergenic | 45.0% | |
ATGATCCGGGTAACCGTAAA+AGG | - | chr4.4:24960096-24960115 | None:intergenic | 45.0% | |
ATGCATCCTGACAAATCTCC+AGG | + | chr4.4:24961100-24961119 | MS.gene26433:intron | 45.0% | |
ATTCCCCAATGAAATTCCCC+AGG | - | chr4.4:24958991-24959010 | None:intergenic | 45.0% | |
CACTACAATCAGTTCCGTTC+TGG | + | chr4.4:24958912-24958931 | MS.gene26433:intron | 45.0% | |
CAGAACGGAACTGATTGTAG+TGG | - | chr4.4:24958914-24958933 | None:intergenic | 45.0% | |
CAGAAGAAAATCAAGCGTCC+AGG | + | chr4.4:24959103-24959122 | MS.gene26433:intron | 45.0% | |
CAGGTTGTTGTCGAAATACC+AGG | - | chr4.4:24958846-24958865 | None:intergenic | 45.0% | |
CCATCCTAAAAAAAGGTCCC+TGG | + | chr4.4:24958825-24958844 | MS.gene26433:CDS | 45.0% | |
CCTATCAATGCGTGCTTCTT+TGG | - | chr4.4:24960357-24960376 | None:intergenic | 45.0% | |
CCTTGTCCGTGTCTATAAAC+CGG | + | chr4.4:24959848-24959867 | MS.gene26433:intron | 45.0% | |
CGTTGAGAGGAAGATCGATA+AGG | - | chr4.4:24960292-24960311 | None:intergenic | 45.0% | |
CTAGTGTCTGCAGTATCATC+AGG | - | chr4.4:24958644-24958663 | None:intergenic | 45.0% | |
CTCTAATAAGCCAATGGGGT+CGG | - | chr4.4:24960241-24960260 | None:intergenic | 45.0% | |
CTTTCTGTCATAAACCCCAC+AGG | - | chr4.4:24958956-24958975 | None:intergenic | 45.0% | |
GAAACGGAAGCTGTTATGAG+GGG | - | chr4.4:24960498-24960517 | None:intergenic | 45.0% | |
GAACGGATACGTGCAATAAC+TGG | - | chr4.4:24961004-24961023 | None:intergenic | 45.0% | |
GAAGAAAATCAAGCGTCCAG+GGG | + | chr4.4:24959105-24959124 | MS.gene26433:intron | 45.0% | |
GAAGTAAGCCACGATCCATT+TGG | - | chr4.4:24960908-24960927 | None:intergenic | 45.0% | |
GAAGTCTCCGATAATACACC+AGG | - | chr4.4:24960177-24960196 | None:intergenic | 45.0% | |
GAGCCATGAATGTTATAGCC+TGG | + | chr4.4:24959778-24959797 | MS.gene26433:intron | 45.0% | |
GAGGATTTCAAAGGCAGAGA+GGG | - | chr4.4:24961434-24961453 | None:intergenic | 45.0% | |
GAGGCAATTTACTTCGGTTG+GGG | - | chr4.4:24961860-24961879 | None:intergenic | 45.0% | |
GATGACCCCTGGTGTATTAT+CGG | + | chr4.4:24960167-24960186 | MS.gene26433:CDS | 45.0% | |
GCTATAACATTCATGGCTCC+CGG | - | chr4.4:24959777-24959796 | None:intergenic | 45.0% | |
GCTCCAACTAACACTGTCAA+AGG | - | chr4.4:24961524-24961543 | None:intergenic | 45.0% | |
GCTTGTTCTTGGCTTCAATC+TGG | + | chr4.4:24961193-24961212 | MS.gene26433:intron | 45.0% | |
GGACGTTGCACAAAGAGATA+GGG | - | chr4.4:24961300-24961319 | None:intergenic | 45.0% | |
GTTGATCCAGCTAACGGTAA+CGG | + | chr4.4:24959385-24959404 | MS.gene26433:CDS | 45.0% | |
TACCAATTAAAGGGCGGAGT+CGG | - | chr4.4:24961354-24961373 | None:intergenic | 45.0% | |
TACGTGCAATAACTGGTTGC+TGG | - | chr4.4:24960997-24961016 | None:intergenic | 45.0% | |
TACTCCAAGAGGACGCTTAT+TGG | + | chr4.4:24960771-24960790 | MS.gene26433:CDS | 45.0% | |
TATCTCCTTCCGACAAACGA+GGG | + | chr4.4:24960207-24960226 | MS.gene26433:CDS | 45.0% | |
TCAACGGGTATCCATTCACT+TGG | + | chr4.4:24960306-24960325 | MS.gene26433:CDS | 45.0% | |
TCACGCTCAGACTTGAATGA+AGG | + | chr4.4:24959589-24959608 | MS.gene26433:CDS | 45.0% | |
TCACTTTAGCTGACCTGTTG+AGG | + | chr4.4:24959446-24959465 | MS.gene26433:CDS | 45.0% | |
TCATCAGGAAAACCCTCGAT+TGG | - | chr4.4:24958629-24958648 | None:intergenic | 45.0% | |
TCATGAATTCGGACCCAGAA+CGG | - | chr4.4:24958929-24958948 | None:intergenic | 45.0% | |
TGATCACCCGGAAACTATCA+AGG | + | chr4.4:24961267-24961286 | MS.gene26433:intron | 45.0% | |
TGGAAGAGGGGTCAACATTA+AGG | + | chr4.4:24958748-24958767 | MS.gene26433:CDS | 45.0% | |
TGTAGTGGTACACTTTCAGC+AGG | - | chr4.4:24958899-24958918 | None:intergenic | 45.0% | |
TGTCTGTCGACACGTAATTC+AGG | - | chr4.4:24959268-24959287 | None:intergenic | 45.0% | |
TTAATGTTGACCCCTCTTCC+AGG | - | chr4.4:24958749-24958768 | None:intergenic | 45.0% | |
! | ATGATGGAGCAAGATTCTGG+GGG | + | chr4.4:24959242-24959261 | MS.gene26433:CDS | 45.0% |
! | CCAAAGAAGCACGCATTGAT+AGG | + | chr4.4:24960354-24960373 | MS.gene26433:CDS | 45.0% |
! | CTTTTCAATGGGGACCGTAT+CGG | + | chr4.4:24961634-24961653 | MS.gene26433:intron | 45.0% |
! | GTAGACTGTATTGGTCGTAG+TGG | + | chr4.4:24959957-24959976 | MS.gene26433:intron | 45.0% |
! | GTTATCCATGATGGAACGTG+AGG | - | chr4.4:24961410-24961429 | None:intergenic | 45.0% |
! | GTTTTTGCTGAAGGCTATGG+CGG | - | chr4.4:24961941-24961960 | None:intergenic | 45.0% |
! | TTTTACGGTTACCCGGATCA+TGG | + | chr4.4:24960095-24960114 | MS.gene26433:CDS | 45.0% |
!! | AGTTTTGGCATCCTGGAAGA+GGG | + | chr4.4:24958735-24958754 | MS.gene26433:CDS | 45.0% |
!! | ATAGCTGAGTTTTGGCATCC+TGG | + | chr4.4:24958728-24958747 | MS.gene26433:CDS | 45.0% |
!! | CAGATGATGGAGCAAGATTC+TGG | + | chr4.4:24959239-24959258 | MS.gene26433:intron | 45.0% |
!! | CGTGTTTTTGCTGAAGGCTA+TGG | - | chr4.4:24961944-24961963 | None:intergenic | 45.0% |
!! | GATGATGGAGCAAGATTCTG+GGG | + | chr4.4:24959241-24959260 | MS.gene26433:intron | 45.0% |
!! | GGAGAGTATTAAGGATCAGC+AGG | - | chr4.4:24958865-24958884 | None:intergenic | 45.0% |
!! | TCTGGCCAAGCTCTAAACTT+CGG | + | chr4.4:24961910-24961929 | MS.gene26433:intron | 45.0% |
!!! | CCAGGGACCTTTTTTTAGGA+TGG | - | chr4.4:24958828-24958847 | None:intergenic | 45.0% |
!!! | GGCTGTTTTGGAGTTCAATG+AGG | - | chr4.4:24960739-24960758 | None:intergenic | 45.0% |
!!! | TTTTGGAGTTCAATGAGGCG+TGG | - | chr4.4:24960734-24960753 | None:intergenic | 45.0% |
AAGGCCTCACTGCTCTAATC+CGG | + | chr4.4:24961728-24961747 | MS.gene26433:intron | 50.0% | |
AATAAGCCAATGGGGTCGGT+CGG | - | chr4.4:24960237-24960256 | None:intergenic | 50.0% | |
AATTAAAGGGCGGAGTCGGT+TGG | - | chr4.4:24961350-24961369 | None:intergenic | 50.0% | |
ACCTTTGACAGGGTCCTGAA+TGG | - | chr4.4:24960057-24960076 | None:intergenic | 50.0% | |
AGACAGAAGAACGAAGGCAG+AGG | + | chr4.4:24959283-24959302 | MS.gene26433:CDS | 50.0% | |
AGCTATCGTCTGCAAAGAGG+AGG | - | chr4.4:24961819-24961838 | None:intergenic | 50.0% | |
AGGTGGTGTAGGGATGTTGA+GGG | - | chr4.4:24959653-24959672 | None:intergenic | 50.0% | |
AGTTTCCGGGTGATCACCTT+TGG | - | chr4.4:24961263-24961282 | None:intergenic | 50.0% | |
ATAGTCAGTCAGATGACCCC+TGG | + | chr4.4:24960156-24960175 | MS.gene26433:CDS | 50.0% | |
ATCCGGCATAATGAGCTCGT+CGG | + | chr4.4:24961745-24961764 | MS.gene26433:intron | 50.0% | |
ATCTCCTTCCGACAAACGAG+GGG | + | chr4.4:24960208-24960227 | MS.gene26433:CDS | 50.0% | |
ATGAGGGAACAATTCCAGCC+AGG | - | chr4.4:24960396-24960415 | None:intergenic | 50.0% | |
ATGGTAGACGGCGTGATTCT+TGG | + | chr4.4:24960114-24960133 | MS.gene26433:CDS | 50.0% | |
CAACACTCAGTCAACACCCA+TGG | + | chr4.4:24959681-24959700 | MS.gene26433:CDS | 50.0% | |
CATATGCGCTGCAAGCACAA+AGG | + | chr4.4:24961457-24961476 | MS.gene26433:intron | 50.0% | |
CCGGTTTATAGACACGGACA+AGG | - | chr4.4:24959851-24959870 | None:intergenic | 50.0% | |
CGATACGGTCCCCATTGAAA+AGG | - | chr4.4:24961636-24961655 | None:intergenic | 50.0% | |
CGTTGCACAAAGAGATAGGG+CGG | - | chr4.4:24961297-24961316 | None:intergenic | 50.0% | |
CTATCTCCTTCCGACAAACG+AGG | + | chr4.4:24960206-24960225 | MS.gene26433:CDS | 50.0% | |
GACGAGATGAAGCTGTCAAG+TGG | - | chr4.4:24960853-24960872 | None:intergenic | 50.0% | |
GATGGAACGTGAGGGAACAA+AGG | - | chr4.4:24961401-24961420 | None:intergenic | 50.0% | |
GCAAAGAGGAGGTGACTAAC+CGG | - | chr4.4:24961808-24961827 | None:intergenic | 50.0% | |
GCATCGAGGACATGAAGCAT+TGG | + | chr4.4:24960615-24960634 | MS.gene26433:CDS | 50.0% | |
GCTAAAGTGACCGTTTCAGC+AGG | - | chr4.4:24959436-24959455 | None:intergenic | 50.0% | |
GGAAGCTATCGTCTGCAAAG+AGG | - | chr4.4:24961822-24961841 | None:intergenic | 50.0% | |
GGAGGATTTCAAAGGCAGAG+AGG | - | chr4.4:24961435-24961454 | None:intergenic | 50.0% | |
GGATCAAGCTGCAAGAGAAG+CGG | - | chr4.4:24960461-24960480 | None:intergenic | 50.0% | |
GGCCTCTTCCAAGCAATCAA+CGG | + | chr4.4:24960968-24960987 | MS.gene26433:CDS | 50.0% | |
GGTCCCCATTGAAAAGGATG+TGG | - | chr4.4:24961630-24961649 | None:intergenic | 50.0% | |
GTAGGGATGTTGAGGGATGT+GGG | - | chr4.4:24959646-24959665 | None:intergenic | 50.0% | |
GTCGACAGACAGAAGAACGA+AGG | + | chr4.4:24959277-24959296 | MS.gene26433:CDS | 50.0% | |
GTGAATGGATACCCGTTGAG+AGG | - | chr4.4:24960305-24960324 | None:intergenic | 50.0% | |
GTTACCCGGATCATGGTAGA+CGG | + | chr4.4:24960102-24960121 | MS.gene26433:CDS | 50.0% | |
GTTATAGCCTGGAACTGTCG+TGG | + | chr4.4:24959789-24959808 | MS.gene26433:intron | 50.0% | |
GTTTCCGGGTGATCACCTTT+GGG | - | chr4.4:24961262-24961281 | None:intergenic | 50.0% | |
TAAAAGGCAGTGAGACGCCA+AGG | - | chr4.4:24960080-24960099 | None:intergenic | 50.0% | |
TAGGGATGTTGAGGGATGTG+GGG | - | chr4.4:24959645-24959664 | None:intergenic | 50.0% | |
TCCAAGAGGACGCTTATTGG+CGG | + | chr4.4:24960774-24960793 | MS.gene26433:CDS | 50.0% | |
TCCATTCAGGACCCTGTCAA+AGG | + | chr4.4:24960053-24960072 | MS.gene26433:CDS | 50.0% | |
TGACAGCTTCATCTCGTCGT+CGG | + | chr4.4:24960855-24960874 | MS.gene26433:CDS | 50.0% | |
TGAGGGAACAATTCCAGCCA+GGG | - | chr4.4:24960395-24960414 | None:intergenic | 50.0% | |
TGGCGTGCATGTCTCGATAA+TGG | - | chr4.4:24958808-24958827 | None:intergenic | 50.0% | |
TGGTAGACGGCGTGATTCTT+GGG | + | chr4.4:24960115-24960134 | MS.gene26433:CDS | 50.0% | |
TGTAGGGATGTTGAGGGATG+TGG | - | chr4.4:24959647-24959666 | None:intergenic | 50.0% | |
TGTGCTTGCAGCGCATATGA+TGG | - | chr4.4:24961456-24961475 | None:intergenic | 50.0% | |
TGTTATGCGCAGGTGGTGTA+GGG | - | chr4.4:24959663-24959682 | None:intergenic | 50.0% | |
TGTTCCCTCACGTTCCATCA+TGG | + | chr4.4:24961402-24961421 | MS.gene26433:intron | 50.0% | |
TTACTTCGGTTGGGGTTGCT+TGG | - | chr4.4:24961852-24961871 | None:intergenic | 50.0% | |
TTGGGGTTGCTTGGCAAAAG+AGG | - | chr4.4:24961843-24961862 | None:intergenic | 50.0% | |
TTGTTATGCGCAGGTGGTGT+AGG | - | chr4.4:24959664-24959683 | None:intergenic | 50.0% | |
! | AACCGACTCCGCCCTTTAAT+TGG | + | chr4.4:24961349-24961368 | MS.gene26433:intron | 50.0% |
! | ATCAGCTGAAGCATCTGAGG+TGG | - | chr4.4:24960711-24960730 | None:intergenic | 50.0% |
! | CACCGTTGATTGCTTGGAAG+AGG | - | chr4.4:24960973-24960992 | None:intergenic | 50.0% |
! | CACTGCCTTTTACGGTTACC+CGG | + | chr4.4:24960088-24960107 | MS.gene26433:CDS | 50.0% |
! | CGGAGGTCCTTGATAGTTTC+CGG | - | chr4.4:24961277-24961296 | None:intergenic | 50.0% |
! | GACTGAGTGTTGTTATGCGC+AGG | - | chr4.4:24959673-24959692 | None:intergenic | 50.0% |
! | GACTGTATTGGTCGTAGTGG+CGG | + | chr4.4:24959960-24959979 | MS.gene26433:intron | 50.0% |
! | GGAGGTCCTTGATAGTTTCC+GGG | - | chr4.4:24961276-24961295 | None:intergenic | 50.0% |
! | TATGCCGGATTAGAGCAGTG+AGG | - | chr4.4:24961735-24961754 | None:intergenic | 50.0% |
! | TGAGTGTTGTTATGCGCAGG+TGG | - | chr4.4:24959670-24959689 | None:intergenic | 50.0% |
! | TGGATCAGCTGAAGCATCTG+AGG | - | chr4.4:24960714-24960733 | None:intergenic | 50.0% |
! | TGGCGTCTCACTGCCTTTTA+CGG | + | chr4.4:24960080-24960099 | MS.gene26433:CDS | 50.0% |
!! | AGAGAGGGCGTTATCCATGA+TGG | - | chr4.4:24961419-24961438 | None:intergenic | 50.0% |
!! | AGGTGCCGTGTTTTTGCTGA+AGG | - | chr4.4:24961950-24961969 | None:intergenic | 50.0% |
!! | CGACCCCATTGGCTTATTAG+AGG | + | chr4.4:24960239-24960258 | MS.gene26433:CDS | 50.0% |
!! | CGCCATCTGGGAGAGTATTA+AGG | - | chr4.4:24958874-24958893 | None:intergenic | 50.0% |
!! | GAGTTTTGGCATCCTGGAAG+AGG | + | chr4.4:24958734-24958753 | MS.gene26433:CDS | 50.0% |
!! | GGACATGAAGCATTGGAGCA+AGG | + | chr4.4:24960622-24960641 | MS.gene26433:CDS | 50.0% |
!! | GTTTTGGCATCCTGGAAGAG+GGG | + | chr4.4:24958736-24958755 | MS.gene26433:CDS | 50.0% |
!!! | TCTTTTTTATCGGCAGCGCC+TGG | + | chr4.4:24959739-24959758 | MS.gene26433:intron | 50.0% |
AAAGCCCGGATTGAGTCCGT+CGG | - | chr4.4:24961128-24961147 | None:intergenic | 55.0% | |
AAGAGGAGGTGACTAACCGG+AGG | - | chr4.4:24961805-24961824 | None:intergenic | 55.0% | |
AGACACTAGTGCCAGCCTTG+TGG | + | chr4.4:24958655-24958674 | MS.gene26433:CDS | 55.0% | |
AGACGCCAAGGACCTTTGAC+AGG | - | chr4.4:24960068-24960087 | None:intergenic | 55.0% | |
AGAGGAGGTGACTAACCGGA+GGG | - | chr4.4:24961804-24961823 | None:intergenic | 55.0% | |
AGCGGTGTGTGGTCAGACAT+AGG | - | chr4.4:24960443-24960462 | None:intergenic | 55.0% | |
AGGACCCTGTCAAAGGTCCT+TGG | + | chr4.4:24960060-24960079 | MS.gene26433:CDS | 55.0% | |
AGGGAACAATTCCAGCCAGG+GGG | - | chr4.4:24960393-24960412 | None:intergenic | 55.0% | |
AGTGACCGTTTCAGCAGGTG+AGG | - | chr4.4:24959431-24959450 | None:intergenic | 55.0% | |
ATAAGCCAATGGGGTCGGTC+GGG | - | chr4.4:24960236-24960255 | None:intergenic | 55.0% | |
CAGGTGGTGTAGGGATGTTG+AGG | - | chr4.4:24959654-24959673 | None:intergenic | 55.0% | |
CCTTGACGAAGGCCTCTAGT+GGG | - | chr4.4:24961670-24961689 | None:intergenic | 55.0% | |
GAACTGCCTTGACATTGCCG+AGG | - | chr4.4:24959815-24959834 | None:intergenic | 55.0% | |
GACAAATCTCCAGGACCCGA+CGG | + | chr4.4:24961109-24961128 | MS.gene26433:intron | 55.0% | |
GACGCCAAGGACCTTTGACA+GGG | - | chr4.4:24960067-24960086 | None:intergenic | 55.0% | |
GAGGGAACAATTCCAGCCAG+GGG | - | chr4.4:24960394-24960413 | None:intergenic | 55.0% | |
GAGTCGGTTGGCAAGGACTT+TGG | - | chr4.4:24961338-24961357 | None:intergenic | 55.0% | |
GCTTGCAGCGCATATGATGG+AGG | - | chr4.4:24961453-24961472 | None:intergenic | 55.0% | |
GTGACCGTTTCAGCAGGTGA+GGG | - | chr4.4:24959430-24959449 | None:intergenic | 55.0% | |
TCACGCCGTCTACCATGATC+CGG | - | chr4.4:24960110-24960129 | None:intergenic | 55.0% | |
TCCCGACGAGCTCATTATGC+CGG | - | chr4.4:24961750-24961769 | None:intergenic | 55.0% | |
TCCGGCATAATGAGCTCGTC+GGG | + | chr4.4:24961746-24961765 | MS.gene26433:intron | 55.0% | |
TCGGGTCCTGGAGATTTGTC+AGG | - | chr4.4:24961109-24961128 | None:intergenic | 55.0% | |
TCTCCTTCCGACAAACGAGG+GGG | + | chr4.4:24960209-24960228 | MS.gene26433:CDS | 55.0% | |
TGCACAAAGAGATAGGGCGG+AGG | - | chr4.4:24961294-24961313 | None:intergenic | 55.0% | |
TGCACCCAAAGGTGATCACC+CGG | + | chr4.4:24961255-24961274 | MS.gene26433:intron | 55.0% | |
TGCAGCTTGATCCACCTCCA+TGG | + | chr4.4:24960468-24960487 | MS.gene26433:CDS | 55.0% | |
TGCGGCATCCAAATGGATCG+TGG | + | chr4.4:24960897-24960916 | MS.gene26433:CDS | 55.0% | |
TGCTCCCTCACCTGCTGAAA+CGG | + | chr4.4:24959423-24959442 | MS.gene26433:CDS | 55.0% | |
TGGGAGTGAGTGGTCCGATA+CGG | - | chr4.4:24961651-24961670 | None:intergenic | 55.0% | |
TTTCAGCAGGTGCGCCATCT+GGG | - | chr4.4:24958886-24958905 | None:intergenic | 55.0% | |
! | GACACTAGTGCCAGCCTTGT+GGG | + | chr4.4:24958656-24958675 | MS.gene26433:CDS | 55.0% |
! | GCTGGTCACCGTTGATTGCT+TGG | - | chr4.4:24960979-24960998 | None:intergenic | 55.0% |
AAGCCCGGATTGAGTCCGTC+GGG | - | chr4.4:24961127-24961146 | None:intergenic | 60.0% | |
ACAGTCTGCGTGTTACCCCC+TGG | - | chr4.4:24959124-24959143 | None:intergenic | 60.0% | |
ACGAAGGCAGAGGCTCTCGT+TGG | + | chr4.4:24959293-24959312 | MS.gene26433:CDS | 60.0% | |
AGAGAGGGCAGCCTTGACGA+AGG | - | chr4.4:24961681-24961700 | None:intergenic | 60.0% | |
AGGCCTCTAGTGGGAGTGAG+TGG | - | chr4.4:24961661-24961680 | None:intergenic | 60.0% | |
CACGCCGTCTACCATGATCC+GGG | - | chr4.4:24960109-24960128 | None:intergenic | 60.0% | |
CCCACTAGAGGCCTTCGTCA+AGG | + | chr4.4:24961667-24961686 | MS.gene26433:intron | 60.0% | |
CTTTCAGCAGGTGCGCCATC+TGG | - | chr4.4:24958887-24958906 | None:intergenic | 60.0% | |
GAGCTCGTCGGGAGCTTACA+CGG | + | chr4.4:24961757-24961776 | MS.gene26433:intron | 60.0% | |
GAGGAGGTGACTAACCGGAG+GGG | - | chr4.4:24961803-24961822 | None:intergenic | 60.0% | |
GCCGCCAATAAGCGTCCTCT+TGG | - | chr4.4:24960778-24960797 | None:intergenic | 60.0% | |
GCCTTGACGAAGGCCTCTAG+TGG | - | chr4.4:24961671-24961690 | None:intergenic | 60.0% | |
GCGTGACCGTTACCGTTAGC+TGG | - | chr4.4:24959394-24959413 | None:intergenic | 60.0% | |
GCTGCAAGAGAAGCGGTGTG+TGG | - | chr4.4:24960454-24960473 | None:intergenic | 60.0% | |
GGACCACTCACTCCCACTAG+AGG | + | chr4.4:24961655-24961674 | MS.gene26433:intron | 60.0% | |
GGTCTCTTTGTACAGCCCCC+TGG | + | chr4.4:24960375-24960394 | MS.gene26433:CDS | 60.0% | |
GTGGCGGCATTGCCGTTCTA+TGG | + | chr4.4:24959976-24959995 | MS.gene26433:CDS | 60.0% | |
TAAGCCAATGGGGTCGGTCG+GGG | - | chr4.4:24960235-24960254 | None:intergenic | 60.0% | |
TCGTGGCCTCGGCAATGTCA+AGG | + | chr4.4:24959806-24959825 | MS.gene26433:intron | 60.0% | |
TCTTTGTACAGCCCCCTGGC+TGG | + | chr4.4:24960379-24960398 | MS.gene26433:CDS | 60.0% | |
TGTTTGTCGTGCAGCCCCTC+CGG | + | chr4.4:24961786-24961805 | MS.gene26433:intron | 60.0% | |
! | AGCATCTGAGGTGGTGCGCA+TGG | - | chr4.4:24960702-24960721 | None:intergenic | 60.0% |
! | AGGACCCGACGGACTCAATC+CGG | + | chr4.4:24961120-24961139 | MS.gene26433:intron | 60.0% |
! | CTGTTATGAGGGGCACGCCA+TGG | - | chr4.4:24960488-24960507 | None:intergenic | 60.0% |
! | TTATGAGGGGCACGCCATGG+AGG | - | chr4.4:24960485-24960504 | None:intergenic | 60.0% |
AAGGGCGGAGTCGGTTGGCA+AGG | - | chr4.4:24961345-24961364 | None:intergenic | 65.0% | |
ACCACTCCTGCCCTTCCTCC+CGG | - | chr4.4:24959321-24959340 | None:intergenic | 65.0% | |
GCCTGGAACTGTCGTGGCCT+CGG | + | chr4.4:24959795-24959814 | MS.gene26433:intron | 65.0% | |
GGATTGAGTCCGTCGGGTCC+TGG | - | chr4.4:24961121-24961140 | None:intergenic | 65.0% | |
TCATGGCTCCCGGCAGACCT+GGG | - | chr4.4:24959767-24959786 | None:intergenic | 65.0% | |
TTCATGGCTCCCGGCAGACC+TGG | - | chr4.4:24959768-24959787 | None:intergenic | 65.0% | |
! | GGACCCGACGGACTCAATCC+GGG | + | chr4.4:24961121-24961140 | MS.gene26433:intron | 65.0% |
!! | CAGAGGCTCTCGTTGGCTCC+GGG | + | chr4.4:24959300-24959319 | MS.gene26433:CDS | 65.0% |
!! | CTCGTTGGCTCCGGGAGGAA+GGG | + | chr4.4:24959308-24959327 | MS.gene26433:CDS | 65.0% |
!! | GCAGAGGCTCTCGTTGGCTC+CGG | + | chr4.4:24959299-24959318 | MS.gene26433:CDS | 65.0% |
!! | TCTCGTTGGCTCCGGGAGGA+AGG | + | chr4.4:24959307-24959326 | MS.gene26433:CDS | 65.0% |
GCCGAGGCCACGACAGTTCC+AGG | - | chr4.4:24959799-24959818 | None:intergenic | 70.0% | |
GGGCCCCCTCGTTTGTCGGA+AGG | - | chr4.4:24960215-24960234 | None:intergenic | 70.0% | |
GTCGGGGCCCCCTCGTTTGT+CGG | - | chr4.4:24960219-24960238 | None:intergenic | 70.0% | |
TCCGGGAGGAAGGGCAGGAG+TGG | + | chr4.4:24959317-24959336 | MS.gene26433:CDS | 70.0% | |
TTGGCTCCGGGAGGAAGGGC+AGG | + | chr4.4:24959312-24959331 | MS.gene26433:CDS | 70.0% | |
! | TGAGGGGCACGCCATGGAGG+TGG | - | chr4.4:24960482-24960501 | None:intergenic | 70.0% |
!! | AGGCTCTCGTTGGCTCCGGG+AGG | + | chr4.4:24959303-24959322 | MS.gene26433:CDS | 70.0% |
ATCGGCAGCGCCTGGCTCCC+AGG | + | chr4.4:24959747-24959766 | MS.gene26433:intron | 75.0% | |
CGCCTGGCTCCCAGGTCTGC+CGG | + | chr4.4:24959755-24959774 | MS.gene26433:intron | 75.0% | |
GCCTGGCTCCCAGGTCTGCC+GGG | + | chr4.4:24959756-24959775 | MS.gene26433:intron | 75.0% | |
TCCCGGCAGACCTGGGAGCC+AGG | - | chr4.4:24959760-24959779 | None:intergenic | 75.0% | |
! | GGGGCCCCGACCGACCCCAT+TGG | + | chr4.4:24960228-24960247 | MS.gene26433:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 24958572 | 24961976 | 24958572 | ID=MS.gene26433 |
chr4.4 | mRNA | 24958572 | 24961976 | 24958572 | ID=MS.gene26433.t1;Parent=MS.gene26433 |
chr4.4 | exon | 24958572 | 24958905 | 24958572 | ID=MS.gene26433.t1.exon1;Parent=MS.gene26433.t1 |
chr4.4 | CDS | 24958572 | 24958905 | 24958572 | ID=cds.MS.gene26433.t1;Parent=MS.gene26433.t1 |
chr4.4 | exon | 24959242 | 24959733 | 24959242 | ID=MS.gene26433.t1.exon2;Parent=MS.gene26433.t1 |
chr4.4 | CDS | 24959242 | 24959733 | 24959242 | ID=cds.MS.gene26433.t1;Parent=MS.gene26433.t1 |
chr4.4 | exon | 24959961 | 24961027 | 24959961 | ID=MS.gene26433.t1.exon3;Parent=MS.gene26433.t1 |
chr4.4 | CDS | 24959961 | 24961027 | 24959961 | ID=cds.MS.gene26433.t1;Parent=MS.gene26433.t1 |
chr4.4 | exon | 24961947 | 24961976 | 24961947 | ID=MS.gene26433.t1.exon4;Parent=MS.gene26433.t1 |
chr4.4 | CDS | 24961947 | 24961976 | 24961947 | ID=cds.MS.gene26433.t1;Parent=MS.gene26433.t1 |
Gene Sequence |
Protein sequence |