AlfalfaGEDB | MS.gene008658

M. sativa cultivar XinJiangDaYe / MS.gene008658

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene008658.t1	PNX88800.1	48.9	219	100	1	1	207	1	219	9.70E-56	226.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene008658.t1	A0A2K3MDD6	48.9	219	100	1	1	207	1	219	7.0e-56	226.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene97410	MS.gene008658	PPI
MS.gene83772	MS.gene008658	PPI
MS.gene32415	MS.gene008658	PPI
MS.gene009213	MS.gene008658	PPI
MS.gene060788	MS.gene008658	PPI
MS.gene035626	MS.gene008658	PPI
MS.gene008927	MS.gene008658	PPI
MS.gene045614	MS.gene008658	PPI
MS.gene63762	MS.gene008658	PPI
MS.gene27329	MS.gene008658	PPI
MS.gene71675	MS.gene008658	PPI
MS.gene30208	MS.gene008658	PPI
MS.gene028716	MS.gene008658	PPI
MS.gene21066	MS.gene008658	PPI
MS.gene69495	MS.gene008658	PPI
MS.gene06164	MS.gene008658	PPI
MS.gene013676	MS.gene008658	PPI
MS.gene55209	MS.gene008658	PPI
MS.gene64178	MS.gene008658	PPI
MS.gene030090	MS.gene008658	PPI
MS.gene95561	MS.gene008658	PPI
MS.gene96174	MS.gene008658	PPI
MS.gene008658	MS.gene44144	PPI
MS.gene018196	MS.gene008658	PPI
MS.gene065627	MS.gene008658	PPI
MS.gene57019	MS.gene008658	PPI
MS.gene010890	MS.gene008658	PPI
MS.gene018745	MS.gene008658	PPI
MS.gene65546	MS.gene008658	PPI
MS.gene000506	MS.gene008658	PPI
MS.gene74639	MS.gene008658	PPI
MS.gene032299	MS.gene008658	PPI
MS.gene03936	MS.gene008658	PPI
MS.gene038098	MS.gene008658	PPI
MS.gene60059	MS.gene008658	PPI
MS.gene062511	MS.gene008658	PPI
MS.gene34197	MS.gene008658	PPI
MS.gene28718	MS.gene008658	PPI
MS.gene055560	MS.gene008658	PPI
MS.gene008275	MS.gene008658	PPI
MS.gene34618	MS.gene008658	PPI
MS.gene59460	MS.gene008658	PPI
MS.gene038757	MS.gene008658	PPI
MS.gene064966	MS.gene008658	PPI
MS.gene016632	MS.gene008658	PPI
MS.gene048072	MS.gene008658	PPI
MS.gene002590	MS.gene008658	PPI
MS.gene025987	MS.gene008658	PPI
MS.gene008658	MS.gene018474	PPI
MS.gene000640	MS.gene008658	PPI
MS.gene008658	MS.gene86868	PPI
MS.gene43924	MS.gene008658	PPI
MS.gene046089	MS.gene008658	PPI
MS.gene047954	MS.gene008658	PPI
MS.gene35175	MS.gene008658	PPI
MS.gene77990	MS.gene008658	PPI
MS.gene036423	MS.gene008658	PPI
MS.gene069786	MS.gene008658	PPI
MS.gene054652	MS.gene008658	PPI
MS.gene013644	MS.gene008658	PPI
MS.gene013890	MS.gene008658	PPI
MS.gene060773	MS.gene008658	PPI
MS.gene61651	MS.gene008658	PPI
MS.gene66651	MS.gene008658	PPI
MS.gene96109	MS.gene008658	PPI
MS.gene35202	MS.gene008658	PPI
MS.gene051449	MS.gene008658	PPI
MS.gene015093	MS.gene008658	PPI
MS.gene007022	MS.gene008658	PPI
MS.gene63743	MS.gene008658	PPI
MS.gene008658	MS.gene61499	PPI
MS.gene48477	MS.gene008658	PPI
MS.gene51804	MS.gene008658	PPI
MS.gene045875	MS.gene008658	PPI
MS.gene038394	MS.gene008658	PPI
MS.gene30136	MS.gene008658	PPI
MS.gene95960	MS.gene008658	PPI
MS.gene008861	MS.gene008658	PPI
MS.gene61452	MS.gene008658	PPI
MS.gene73261	MS.gene008658	PPI
MS.gene024297	MS.gene008658	PPI
MS.gene016102	MS.gene008658	PPI
MS.gene46941	MS.gene008658	PPI
MS.gene96541	MS.gene008658	PPI
MS.gene049561	MS.gene008658	PPI
MS.gene45083	MS.gene008658	PPI
MS.gene000634	MS.gene008658	PPI
MS.gene009781	MS.gene008658	PPI
MS.gene85295	MS.gene008658	PPI
MS.gene60390	MS.gene008658	PPI
MS.gene47792	MS.gene008658	PPI
MS.gene46948	MS.gene008658	PPI
MS.gene98471	MS.gene008658	PPI
MS.gene025873	MS.gene008658	PPI
MS.gene012019	MS.gene008658	PPI
MS.gene025401	MS.gene008658	PPI
MS.gene05358	MS.gene008658	PPI
MS.gene074257	MS.gene008658	PPI
MS.gene008658	MS.gene022929	PPI
MS.gene010656	MS.gene008658	PPI
MS.gene000629	MS.gene008658	PPI
MS.gene09023	MS.gene008658	PPI
MS.gene059269	MS.gene008658	PPI
MS.gene40469	MS.gene008658	PPI
MS.gene041264	MS.gene008658	PPI
MS.gene41979	MS.gene008658	PPI
MS.gene024522	MS.gene008658	PPI
MS.gene05319	MS.gene008658	PPI
MS.gene88393	MS.gene008658	PPI
MS.gene56991	MS.gene008658	PPI
MS.gene008658	MS.gene048342	PPI
MS.gene85538	MS.gene008658	PPI
MS.gene22111	MS.gene008658	PPI
MS.gene055223	MS.gene008658	PPI
MS.gene008658	MS.gene21066	PPI
MS.gene28545	MS.gene008658	PPI
MS.gene053747	MS.gene008658	PPI
MS.gene29321	MS.gene008658	PPI
MS.gene65471	MS.gene008658	PPI
MS.gene061850	MS.gene008658	PPI
MS.gene069624	MS.gene008658	PPI
MS.gene048088	MS.gene008658	PPI
MS.gene018474	MS.gene008658	PPI
MS.gene003264	MS.gene008658	PPI
MS.gene073582	MS.gene008658	PPI
MS.gene058889	MS.gene008658	PPI
MS.gene98616	MS.gene008658	PPI
MS.gene40828	MS.gene008658	PPI
MS.gene53904	MS.gene008658	PPI
MS.gene09517	MS.gene008658	PPI
MS.gene69586	MS.gene008658	PPI
MS.gene042027	MS.gene008658	PPI
MS.gene69490	MS.gene008658	PPI
MS.gene043140	MS.gene008658	PPI
MS.gene015248	MS.gene008658	PPI
MS.gene84790	MS.gene008658	PPI
MS.gene80362	MS.gene008658	PPI
MS.gene72520	MS.gene008658	PPI
MS.gene44083	MS.gene008658	PPI
MS.gene37537	MS.gene008658	PPI
MS.gene013193	MS.gene008658	PPI
MS.gene04970	MS.gene008658	PPI
MS.gene08106	MS.gene008658	PPI
MS.gene24278	MS.gene008658	PPI
MS.gene025158	MS.gene008658	PPI
MS.gene027994	MS.gene008658	PPI
MS.gene61499	MS.gene008658	PPI
MS.gene068629	MS.gene008658	PPI
MS.gene019001	MS.gene008658	PPI
MS.gene008658	MS.gene74639	PPI
MS.gene008658	MS.gene071133	PPI
MS.gene63150	MS.gene008658	PPI
MS.gene54051	MS.gene008658	PPI
MS.gene98127	MS.gene008658	PPI
MS.gene03149	MS.gene008658	PPI
MS.gene008658	MS.gene37955	PPI
MS.gene87529	MS.gene008658	PPI
MS.gene024405	MS.gene008658	PPI
MS.gene012748	MS.gene008658	PPI
MS.gene04134	MS.gene008658	PPI
MS.gene83979	MS.gene008658	PPI
MS.gene062067	MS.gene008658	PPI
MS.gene008658	MS.gene84790	PPI
MS.gene92517	MS.gene008658	PPI
MS.gene057934	MS.gene008658	PPI
MS.gene57044	MS.gene008658	PPI
MS.gene054508	MS.gene008658	PPI
MS.gene89815	MS.gene008658	PPI
MS.gene028714	MS.gene008658	PPI
MS.gene049610	MS.gene008658	PPI
MS.gene017586	MS.gene008658	PPI
MS.gene038676	MS.gene008658	PPI
MS.gene060718	MS.gene008658	PPI
MS.gene71637	MS.gene008658	PPI
MS.gene042651	MS.gene008658	PPI
MS.gene93396	MS.gene008658	PPI
MS.gene05576	MS.gene008658	PPI
MS.gene52349	MS.gene008658	PPI
MS.gene05231	MS.gene008658	PPI
MS.gene008658	MS.gene027994	PPI
MS.gene98467	MS.gene008658	PPI
MS.gene46353	MS.gene008658	PPI
MS.gene008658	MS.gene007022	PPI
MS.gene42010	MS.gene008658	PPI
MS.gene037049	MS.gene008658	PPI
MS.gene034643	MS.gene008658	PPI
MS.gene037634	MS.gene008658	PPI
MS.gene000379	MS.gene008658	PPI
MS.gene048342	MS.gene008658	PPI
MS.gene64130	MS.gene008658	PPI
MS.gene050679	MS.gene008658	PPI
MS.gene24070	MS.gene008658	PPI
MS.gene60266	MS.gene008658	PPI
MS.gene20246	MS.gene008658	PPI
MS.gene008658	MS.gene61651	PPI
MS.gene016719	MS.gene008658	PPI
MS.gene010290	MS.gene008658	PPI
MS.gene071784	MS.gene008658	PPI
MS.gene061579	MS.gene008658	PPI
MS.gene039692	MS.gene008658	PPI
MS.gene76420	MS.gene008658	PPI
MS.gene071320	MS.gene008658	PPI
MS.gene008658	MS.gene88393	PPI
MS.gene022929	MS.gene008658	PPI
MS.gene026680	MS.gene008658	PPI
MS.gene26433	MS.gene008658	PPI
MS.gene34463	MS.gene008658	PPI
MS.gene22730	MS.gene008658	PPI
MS.gene042559	MS.gene008658	PPI
MS.gene22200	MS.gene008658	PPI
MS.gene071133	MS.gene008658	PPI
MS.gene26038	MS.gene008658	PPI
MS.gene08606	MS.gene008658	PPI
MS.gene08708	MS.gene008658	PPI
MS.gene008658	MS.gene015093	PPI
MS.gene85308	MS.gene008658	PPI
MS.gene49057	MS.gene008658	PPI
MS.gene012889	MS.gene008658	PPI
MS.gene053373	MS.gene008658	PPI
MS.gene34812	MS.gene008658	PPI
MS.gene02896	MS.gene008658	PPI
MS.gene008658	MS.gene08606	PPI
MS.gene063214	MS.gene008658	PPI
MS.gene55682	MS.gene008658	PPI
MS.gene008658	MS.gene000640	PPI
MS.gene51799	MS.gene008658	PPI
MS.gene58419	MS.gene008658	PPI
MS.gene008658	MS.gene09517	PPI
MS.gene067340	MS.gene008658	PPI
MS.gene96163	MS.gene008658	PPI
MS.gene65623	MS.gene008658	PPI
MS.gene08713	MS.gene008658	PPI
MS.gene65474	MS.gene008658	PPI
MS.gene23521	MS.gene008658	PPI
MS.gene019177	MS.gene008658	PPI
MS.gene008658	MS.gene62249	PPI
MS.gene049512	MS.gene008658	PPI
MS.gene29406	MS.gene008658	PPI
MS.gene038623	MS.gene008658	PPI
MS.gene86275	MS.gene008658	PPI
MS.gene05357	MS.gene008658	PPI
MS.gene032311	MS.gene008658	PPI
MS.gene004417	MS.gene008658	PPI
MS.gene86849	MS.gene008658	PPI
MS.gene50392	MS.gene008658	PPI
MS.gene37955	MS.gene008658	PPI
MS.gene072852	MS.gene008658	PPI
MS.gene008658	MS.gene60390	PPI
MS.gene41393	MS.gene008658	PPI
MS.gene39956	MS.gene008658	PPI
MS.gene021968	MS.gene008658	PPI
MS.gene98756	MS.gene008658	PPI
MS.gene09589	MS.gene008658	PPI
MS.gene44144	MS.gene008658	PPI
MS.gene43393	MS.gene008658	PPI
MS.gene057828	MS.gene008658	PPI
MS.gene044729	MS.gene008658	PPI
MS.gene66650	MS.gene008658	PPI
MS.gene005120	MS.gene008658	PPI
MS.gene86868	MS.gene008658	PPI
MS.gene008658	MS.gene025158	PPI
MS.gene060386	MS.gene008658	PPI
MS.gene71588	MS.gene008658	PPI
MS.gene04749	MS.gene008658	PPI
MS.gene05436	MS.gene008658	PPI
MS.gene059736	MS.gene008658	PPI
MS.gene70932	MS.gene008658	PPI
MS.gene027169	MS.gene008658	PPI
MS.gene62249	MS.gene008658	PPI
MS.gene81194	MS.gene008658	PPI
MS.gene025675	MS.gene008658	PPI
MS.gene42903	MS.gene008658	PPI
MS.gene81712	MS.gene008658	PPI
MS.gene008658	MS.gene025987	PPI
MS.gene008658	MS.gene043140	PPI
MS.gene021965	MS.gene008658	PPI
MS.gene055683	MS.gene008658	PPI
MS.gene042614	MS.gene008658	PPI
MS.gene41643	MS.gene008658	PPI
MS.gene26844	MS.gene008658	PPI
MS.gene021555	MS.gene008658	PPI
MS.gene008658	MS.gene03149	PPI
MS.gene048747	MS.gene008658	PPI
MS.gene021647	MS.gene008658	PPI
MS.gene69584	MS.gene008658	PPI
MS.gene019165	MS.gene008658	PPI
MS.gene048706	MS.gene008658	PPI
MS.gene055546	MS.gene008658	PPI
MS.gene009121	MS.gene008658	PPI
MS.gene94654	MS.gene008658	PPI
MS.gene008658	MS.gene24278	PPI
MS.gene024841	MS.gene008658	PPI
MS.gene008658	MS.gene000379	PPI
MS.gene073573	MS.gene008658	PPI
MS.gene031967	MS.gene008658	PPI
MS.gene87845	MS.gene008658	PPI
MS.gene36069	MS.gene008658	PPI
MS.gene008658	MS.gene59460	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene008658.t1	MTR_3g053920	37.748	151	91	1	2	152	5	152	6.04e-34	123
MS.gene008658.t1	MTR_2g061500	41.322	121	71	0	3	123	6	126	1.13e-31	113
MS.gene008658.t1	MTR_0010s0370	30.286	175	106	4	4	162	3	177	6.99e-22	89.4
MS.gene008658.t1	MTR_0010s0350	30.286	175	106	4	4	162	3	177	6.99e-22	89.4
MS.gene008658.t1	MTR_6g033215	25.568	176	117	2	22	183	118	293	5.96e-17	78.2
MS.gene008658.t1	MTR_1g036720	28.037	107	75	1	5	109	4	110	8.67e-13	63.2
MS.gene008658.t1	MTR_7g011710	40.278	72	43	0	52	123	1	72	1.66e-12	63.5
MS.gene008658.t1	MTR_4g103530	43.478	69	39	0	55	123	4	72	9.15e-12	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 57 sgRNAs with CRISPR-Local

Find 63 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTGGATTCTCCTTATCAAAT+AGG	0.270270	3.4:+60270331	None:intergenic
AAATTAAGATAAACATTCTT+AGG	0.288740	3.4:+60270643	None:intergenic
ACCACTTAAACAAGATTTGC+AGG	0.310094	3.4:-60270463	MS.gene008658:CDS
GATCCAAGATGGTCGAAGTT+TGG	0.363524	3.4:+60270899	None:intergenic
ACATTCTTAGGAACCATTCC+TGG	0.380386	3.4:+60270655	None:intergenic
ACCTGCAAATCTTGTTTAAG+TGG	0.390056	3.4:+60270462	None:intergenic
CACTTCTTGGAGGCTGGTGA+AGG	0.397566	3.4:-60270809	MS.gene008658:CDS
AGGAACGGCTGGGCACTTCT+TGG	0.405137	3.4:-60270822	MS.gene008658:CDS
GGCTTATCTCAAGGAACGGC+TGG	0.406425	3.4:-60270833	MS.gene008658:CDS
AAAATATCTTTCTCAAAGAC+TGG	0.412326	3.4:+60270312	None:intergenic
AACGGCGGGACCTGTACTTC+AGG	0.413843	3.4:-60270289	MS.gene008658:CDS
AGGTATATGTTTCCAGTTGT+AGG	0.418631	3.4:+60270772	None:intergenic
TGGTAAGTACCTTGGAGAAC+TGG	0.421913	3.4:-60270556	MS.gene008658:CDS
TCTTGTGAGTGAATTGAAAC+AGG	0.428370	3.4:+60270752	None:intergenic
GTCATTGAAATTATTGCTCC+AGG	0.433628	3.4:-60270673	MS.gene008658:CDS
TTGTGAAATCCTATTTGATA+AGG	0.433773	3.4:-60270340	MS.gene008658:CDS
TGTATGTGGGCCTGAAGTAC+AGG	0.438936	3.4:+60270279	None:intergenic
ATCACAGTTATACCTACAAC+TGG	0.439649	3.4:-60270784	MS.gene008658:CDS
TGTCCAAACTTCGACCATCT+TGG	0.441314	3.4:-60270902	MS.gene008658:CDS
GACAGATGCGTCAAGGTTCA+AGG	0.450026	3.4:+60270921	None:intergenic
TTTCACAAGTACGGCCAGTA+TGG	0.453288	3.4:+60270355	None:intergenic
ACCATGGATATCGATCTTCA+TGG	0.464241	3.4:-60270970	MS.gene008658:CDS
CGATCTTCATGGTTTGACCT+TGG	0.465702	3.4:-60270959	MS.gene008658:CDS
TCTTCATGGTTTGACCTTGG+AGG	0.471139	3.4:-60270956	MS.gene008658:CDS
AACGGCTGGGCACTTCTTGG+AGG	0.476553	3.4:-60270819	MS.gene008658:CDS
TTTGTTCTCGTGGTGGAGAG+TGG	0.494715	3.4:-60270440	MS.gene008658:CDS
CAAATAGGATTTCACAAGTA+CGG	0.501950	3.4:+60270346	None:intergenic
GCTGGGCACTTCTTGGAGGC+TGG	0.505559	3.4:-60270815	MS.gene008658:CDS
AGCCAATCGCACATCCTTGT+CGG	0.509959	3.4:+60270852	None:intergenic
TGTGGAGTTCTTGACCATAC+TGG	0.511742	3.4:-60270369	MS.gene008658:CDS
TTGTTCTCGTGGTGGAGAGT+GGG	0.512414	3.4:-60270439	MS.gene008658:CDS
GATTTGCAGGTTTGTTCTCG+TGG	0.513963	3.4:-60270450	MS.gene008658:CDS
ACTTCTTGGAGGCTGGTGAA+GGG	0.518226	3.4:-60270808	MS.gene008658:CDS
TGGTTTGACCTTGGAGGACG+AGG	0.523972	3.4:-60270950	MS.gene008658:CDS
TGAAATTATTGCTCCAGGAA+TGG	0.527151	3.4:-60270668	MS.gene008658:CDS
ATCCGACAAGGATGTGCGAT+TGG	0.543661	3.4:-60270854	MS.gene008658:CDS
ATCTTGGATCATTGTCTGAT+CGG	0.544005	3.4:-60270886	MS.gene008658:CDS
CAGGTTGTTCACGAAGCGAA+AGG	0.546922	3.4:-60270505	MS.gene008658:CDS
ACATGATGAAGGGTGGACCT+TGG	0.561440	3.4:-60270717	MS.gene008658:CDS
GAAGCCATTGGTAAGTACCT+TGG	0.564143	3.4:-60270564	MS.gene008658:CDS
TTCTCCAAGGTACTTACCAA+TGG	0.565889	3.4:+60270560	None:intergenic
TGACGCTGAAAACATGATGA+AGG	0.566730	3.4:-60270728	MS.gene008658:CDS
ACAGTAAGAACACTATTCAC+AGG	0.584216	3.4:-60270524	MS.gene008658:CDS
TTGCAGGTTTGTTCTCGTGG+TGG	0.586242	3.4:-60270447	MS.gene008658:CDS
GGTCATAACCTCGTCCTCCA+AGG	0.596650	3.4:+60270942	None:intergenic
TGTGCGATTGGCTTATCTCA+AGG	0.596876	3.4:-60270842	MS.gene008658:CDS
AAGTTTGGACAGATGCGTCA+AGG	0.608480	3.4:+60270914	None:intergenic
GCTTATCTCAAGGAACGGCT+GGG	0.616971	3.4:-60270832	MS.gene008658:CDS
CAAAAGGTAAGTGAAGCCAT+TGG	0.619195	3.4:-60270576	MS.gene008658:intron
GATCAGACAATGATCCAAGA+TGG	0.620594	3.4:+60270888	None:intergenic
CGGATGCATGCTATCCGACA+AGG	0.624370	3.4:-60270866	MS.gene008658:CDS
TTACAGCTGTCATACGTCCA+AGG	0.637466	3.4:+60270700	None:intergenic
CATACTCGACCAGTTCTCCA+AGG	0.638239	3.4:+60270547	None:intergenic
GATTGGCTTATCTCAAGGAA+CGG	0.659712	3.4:-60270837	MS.gene008658:CDS
GACGCTGAAAACATGATGAA+GGG	0.686342	3.4:-60270727	MS.gene008658:CDS
GCTGAAAACATGATGAAGGG+TGG	0.699446	3.4:-60270724	MS.gene008658:CDS
ACCATGAAGATCGATATCCA+TGG	0.704727	3.4:+60270969	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATTAAGATAAACATTCTT+AGG	+	chr3.4:60270599-60270618	None:intergenic	15.0%
!!!	CTTTGAGAAAGATATTTTAA+CGG	-	chr3.4:60270932-60270951	MS.gene008658:CDS	20.0%
!!!	TTTTGAGTTTATACAACAAA+AGG	-	chr3.4:60270647-60270666	MS.gene008658:CDS	20.0%
!!!	TTTTGTTGTATAAACTCAAA+AGG	+	chr3.4:60270648-60270667	None:intergenic	20.0%
!	AAAATATCTTTCTCAAAGAC+TGG	+	chr3.4:60270930-60270949	None:intergenic	25.0%
!	TTGTGAAATCCTATTTGATA+AGG	-	chr3.4:60270899-60270918	MS.gene008658:CDS	25.0%
!!	CGATTTTGTTCAAATACAAA+AGG	-	chr3.4:60270826-60270845	MS.gene008658:CDS	25.0%
	CAAATAGGATTTCACAAGTA+CGG	+	chr3.4:60270896-60270915	None:intergenic	30.0%
	GTTGTATAAACTCAAAAGGA+AGG	+	chr3.4:60270644-60270663	None:intergenic	30.0%
!!!	TGAGAAAGATATTTTAACGG+CGG	-	chr3.4:60270935-60270954	MS.gene008658:CDS	30.0%
	ACAGTAAGAACACTATTCAC+AGG	-	chr3.4:60270715-60270734	MS.gene008658:CDS	35.0%
	ACCACTTAAACAAGATTTGC+AGG	-	chr3.4:60270776-60270795	MS.gene008658:CDS	35.0%
	AGGTATATGTTTCCAGTTGT+AGG	+	chr3.4:60270470-60270489	None:intergenic	35.0%
	ATCACAGTTATACCTACAAC+TGG	-	chr3.4:60270455-60270474	MS.gene008658:CDS	35.0%
	ATCTTGGATCATTGTCTGAT+CGG	-	chr3.4:60270353-60270372	MS.gene008658:CDS	35.0%
	CTGGATTCTCCTTATCAAAT+AGG	+	chr3.4:60270911-60270930	None:intergenic	35.0%
	GTCATTGAAATTATTGCTCC+AGG	-	chr3.4:60270566-60270585	MS.gene008658:CDS	35.0%
	TCTTGTGAGTGAATTGAAAC+AGG	+	chr3.4:60270490-60270509	None:intergenic	35.0%
	TGAAATTATTGCTCCAGGAA+TGG	-	chr3.4:60270571-60270590	MS.gene008658:CDS	35.0%
!	ACCTGCAAATCTTGTTTAAG+TGG	+	chr3.4:60270780-60270799	None:intergenic	35.0%
!!	GAAACTTTTTGCTATGTGTG+TGG	-	chr3.4:60270852-60270871	MS.gene008658:CDS	35.0%
!!!	GAGAAAGATATTTTAACGGC+GGG	-	chr3.4:60270936-60270955	MS.gene008658:CDS	35.0%
	ACATTCTTAGGAACCATTCC+TGG	+	chr3.4:60270587-60270606	None:intergenic	40.0%
	CAAAAGGTAAGTGAAGCCAT+TGG	-	chr3.4:60270663-60270682	MS.gene008658:CDS	40.0%
	GACGCTGAAAACATGATGAA+GGG	-	chr3.4:60270512-60270531	MS.gene008658:CDS	40.0%
	GATCAGACAATGATCCAAGA+TGG	+	chr3.4:60270354-60270373	None:intergenic	40.0%
	TGACGCTGAAAACATGATGA+AGG	-	chr3.4:60270511-60270530	MS.gene008658:CDS	40.0%
!	TTCTCCAAGGTACTTACCAA+TGG	+	chr3.4:60270682-60270701	None:intergenic	40.0%
!!	GATTGGCTTATCTCAAGGAA+CGG	-	chr3.4:60270402-60270421	MS.gene008658:CDS	40.0%
	AAGTTTGGACAGATGCGTCA+AGG	+	chr3.4:60270328-60270347	None:intergenic	45.0%
	CGATCTTCATGGTTTGACCT+TGG	-	chr3.4:60270280-60270299	MS.gene008658:CDS	45.0%
	GAAGCCATTGGTAAGTACCT+TGG	-	chr3.4:60270675-60270694	MS.gene008658:CDS	45.0%
	GATCCAAGATGGTCGAAGTT+TGG	+	chr3.4:60270343-60270362	None:intergenic	45.0%
	GCTGAAAACATGATGAAGGG+TGG	-	chr3.4:60270515-60270534	MS.gene008658:CDS	45.0%
	TCTTCATGGTTTGACCTTGG+AGG	-	chr3.4:60270283-60270302	MS.gene008658:CDS	45.0%
	TGGTAAGTACCTTGGAGAAC+TGG	-	chr3.4:60270683-60270702	MS.gene008658:CDS	45.0%
	TGTCCAAACTTCGACCATCT+TGG	-	chr3.4:60270337-60270356	MS.gene008658:CDS	45.0%
	TGTGGAGTTCTTGACCATAC+TGG	-	chr3.4:60270870-60270889	MS.gene008658:CDS	45.0%
	TTACAGCTGTCATACGTCCA+AGG	+	chr3.4:60270542-60270561	None:intergenic	45.0%
	TTTCACAAGTACGGCCAGTA+TGG	+	chr3.4:60270887-60270906	None:intergenic	45.0%
!	GATTTGCAGGTTTGTTCTCG+TGG	-	chr3.4:60270789-60270808	MS.gene008658:CDS	45.0%
!!	TGTGCGATTGGCTTATCTCA+AGG	-	chr3.4:60270397-60270416	MS.gene008658:CDS	45.0%
	ACATGATGAAGGGTGGACCT+TGG	-	chr3.4:60270522-60270541	MS.gene008658:CDS	50.0%
	ACTTCTTGGAGGCTGGTGAA+GGG	-	chr3.4:60270431-60270450	MS.gene008658:CDS	50.0%
	AGCCAATCGCACATCCTTGT+CGG	+	chr3.4:60270390-60270409	None:intergenic	50.0%
	ATCCGACAAGGATGTGCGAT+TGG	-	chr3.4:60270385-60270404	MS.gene008658:CDS	50.0%
	CAGGTTGTTCACGAAGCGAA+AGG	-	chr3.4:60270734-60270753	MS.gene008658:CDS	50.0%
	CATACTCGACCAGTTCTCCA+AGG	+	chr3.4:60270695-60270714	None:intergenic	50.0%
	GACAGATGCGTCAAGGTTCA+AGG	+	chr3.4:60270321-60270340	None:intergenic	50.0%
	GCTTATCTCAAGGAACGGCT+GGG	-	chr3.4:60270407-60270426	MS.gene008658:CDS	50.0%
	TGTATGTGGGCCTGAAGTAC+AGG	+	chr3.4:60270963-60270982	None:intergenic	50.0%
!	TTGCAGGTTTGTTCTCGTGG+TGG	-	chr3.4:60270792-60270811	MS.gene008658:CDS	50.0%
!	TTGTTCTCGTGGTGGAGAGT+GGG	-	chr3.4:60270800-60270819	MS.gene008658:CDS	50.0%
!	TTTGTTCTCGTGGTGGAGAG+TGG	-	chr3.4:60270799-60270818	MS.gene008658:CDS	50.0%
	CACTTCTTGGAGGCTGGTGA+AGG	-	chr3.4:60270430-60270449	MS.gene008658:CDS	55.0%
	CGGATGCATGCTATCCGACA+AGG	-	chr3.4:60270373-60270392	MS.gene008658:CDS	55.0%
	GGCTTATCTCAAGGAACGGC+TGG	-	chr3.4:60270406-60270425	MS.gene008658:CDS	55.0%
	GGTCATAACCTCGTCCTCCA+AGG	+	chr3.4:60270300-60270319	None:intergenic	55.0%
	TGGTTTGACCTTGGAGGACG+AGG	-	chr3.4:60270289-60270308	MS.gene008658:CDS	55.0%
	AACGGCGGGACCTGTACTTC+AGG	-	chr3.4:60270950-60270969	MS.gene008658:CDS	60.0%
	AACGGCTGGGCACTTCTTGG+AGG	-	chr3.4:60270420-60270439	MS.gene008658:CDS	60.0%
	AGGAACGGCTGGGCACTTCT+TGG	-	chr3.4:60270417-60270436	MS.gene008658:CDS	60.0%
	GCTGGGCACTTCTTGGAGGC+TGG	-	chr3.4:60270424-60270443	MS.gene008658:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.4	gene	60270272	60270989	60270272	ID=MS.gene008658
chr3.4	mRNA	60270272	60270989	60270272	ID=MS.gene008658.t1;Parent=MS.gene008658
chr3.4	exon	60270624	60270989	60270624	ID=MS.gene008658.t1.exon1;Parent=MS.gene008658.t1
chr3.4	CDS	60270624	60270989	60270624	ID=cds.MS.gene008658.t1;Parent=MS.gene008658.t1
chr3.4	exon	60270272	60270592	60270272	ID=MS.gene008658.t1.exon2;Parent=MS.gene008658.t1
chr3.4	CDS	60270272	60270592	60270272	ID=cds.MS.gene008658.t1;Parent=MS.gene008658.t1

Gene Sequence

>MS.gene008658

ATGGATATCGATCTTCATGGTTTGACCTTGGAGGACGAGGTTATGACCTTGAACCTTGACGCATCTGTCCAAACTTCGACCATCTTGGATCATTGTCTGATCGGATGCATGCTATCCGACAAGGATGTGCGATTGGCTTATCTCAAGGAACGGCTGGGCACTTCTTGGAGGCTGGTGAAGGGTATCACAGTTATACCTACAACTGGAAACATATACCTGTTTCAATTCACTCACAAGAATGACGCTGAAAACATGATGAAGGGTGGACCTTGGACGTATGACAGCTGTAATCTAGTCATTGAAATTATTGCTCCAGGAATGGTTCCTAAGAATGTTTATCTTAATTTTCTGAACATTTCTGTGCAAGTGCCTTCCTTTTGAGTTTATACAACAAAAGGTAAGTGAAGCCATTGGTAAGTACCTTGGAGAACTGGTCGAGTATGACAGTAAGAACACTATTCACAGGTTGTTCACGAAGCGAAAGGTTCGAATCAATGTAATACAACCACTTAAACAAGATTTGCAGGTTTGTTCTCGTGGTGGAGAGTGGGTTTCGATTTTGTTCAAATACAAAAGGCTTGAAACTTTTTGCTATGTGTGTGGAGTTCTTGACCATACTGGCCGTACTTGTGAAATCCTATTTGATAAGGAGAATCCAGTCTTTGAGAAAGATATTTTAACGGCGGGACCTGTACTTCAGGCCCACATACAAAAATGA

Protein sequence

>MS.gene008658.t1

MDIDLHGLTLEDEVMTLNLDASVQTSTILDHCLIGCMLSDKDVRLAYLKERLGTSWRLVKGITVIPTTGNIYLFQFTHKNDAENMMKGGPWTYDSCNLVIEIIAPGMVPKNVYLNFLNISVQVSEAIGKYLGELVEYDSKNTIHRLFTKRKVRINVIQPLKQDLQVCSRGGEWVSILFKYKRLETFCYVCGVLDHTGRTCEILFDKENPVFEKDILTAGPVLQAHIQK