AlfalfaGEDB | MS.gene042614

M. sativa cultivar XinJiangDaYe / MS.gene042614

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene042614.t1	AES70414.1	49.1	224	73	4	1	209	83	280	8.60E-43	184.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene042614.t1	G7J017	49.1	224	73	4	1	209	83	280	6.2e-43	184.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene036423	MS.gene042614	PPI
MS.gene042614	MS.gene012889	PPI
MS.gene042614	MS.gene34463	PPI
MS.gene042614	MS.gene038757	PPI
MS.gene042614	MS.gene000506	PPI
MS.gene72520	MS.gene042614	PPI
MS.gene042614	MS.gene51804	PPI
MS.gene042614	MS.gene013644	PPI
MS.gene66651	MS.gene042614	PPI
MS.gene96109	MS.gene042614	PPI
MS.gene042614	MS.gene54051	PPI
MS.gene35202	MS.gene042614	PPI
MS.gene051449	MS.gene042614	PPI
MS.gene63743	MS.gene042614	PPI
MS.gene042614	MS.gene010890	PPI
MS.gene042614	MS.gene061579	PPI
MS.gene30136	MS.gene042614	PPI
MS.gene008861	MS.gene042614	PPI
MS.gene042614	MS.gene04970	PPI
MS.gene61452	MS.gene042614	PPI
MS.gene83979	MS.gene042614	PPI
MS.gene016102	MS.gene042614	PPI
MS.gene46941	MS.gene042614	PPI
MS.gene042614	MS.gene060788	PPI
MS.gene042614	MS.gene43924	PPI
MS.gene042614	MS.gene41643	PPI
MS.gene85295	MS.gene042614	PPI
MS.gene042614	MS.gene027994	PPI
MS.gene47792	MS.gene042614	PPI
MS.gene46948	MS.gene042614	PPI
MS.gene042614	MS.gene022929	PPI
MS.gene042614	MS.gene26433	PPI
MS.gene042614	MS.gene007022	PPI
MS.gene012019	MS.gene042614	PPI
MS.gene042614	MS.gene69584	PPI
MS.gene042614	MS.gene52349	PPI
MS.gene93396	MS.gene042614	PPI
MS.gene042614	MS.gene021647	PPI
MS.gene05231	MS.gene042614	PPI
MS.gene042614	MS.gene069624	PPI
MS.gene010656	MS.gene042614	PPI
MS.gene042614	MS.gene61651	PPI
MS.gene000629	MS.gene042614	PPI
MS.gene41979	MS.gene042614	PPI
MS.gene64130	MS.gene042614	PPI
MS.gene05319	MS.gene042614	PPI
MS.gene042614	MS.gene016719	PPI
MS.gene042614	MS.gene028714	PPI
MS.gene042614	MS.gene88393	PPI
MS.gene042614	MS.gene042027	PPI
MS.gene56991	MS.gene042614	PPI
MS.gene050679	MS.gene042614	PPI
MS.gene042614	MS.gene054508	PPI
MS.gene042614	MS.gene69586	PPI
MS.gene042614	MS.gene053373	PPI
MS.gene20246	MS.gene042614	PPI
MS.gene055223	MS.gene042614	PPI
MS.gene053747	MS.gene042614	PPI
MS.gene042614	MS.gene63150	PPI
MS.gene042614	MS.gene03936	PPI
MS.gene65471	MS.gene042614	PPI
MS.gene042614	MS.gene072852	PPI
MS.gene061850	MS.gene042614	PPI
MS.gene042614	MS.gene65474	PPI
MS.gene042614	MS.gene08708	PPI
MS.gene042614	MS.gene06164	PPI
MS.gene042614	MS.gene50392	PPI
MS.gene042614	MS.gene86275	PPI
MS.gene042614	MS.gene22730	PPI
MS.gene042614	MS.gene032299	PPI
MS.gene042614	MS.gene017586	PPI
MS.gene042614	MS.gene037634	PPI
MS.gene042614	MS.gene057828	PPI
MS.gene042614	MS.gene071320	PPI
MS.gene042614	MS.gene08606	PPI
MS.gene98616	MS.gene042614	PPI
MS.gene042614	MS.gene000640	PPI
MS.gene042027	MS.gene042614	PPI
MS.gene042614	MS.gene98756	PPI
MS.gene69490	MS.gene042614	PPI
MS.gene015248	MS.gene042614	PPI
MS.gene042614	MS.gene39956	PPI
MS.gene042614	MS.gene028716	PPI
MS.gene042614	MS.gene74639	PPI
MS.gene042614	MS.gene071133	PPI
MS.gene042614	MS.gene64130	PPI
MS.gene042614	MS.gene60266	PPI
MS.gene042614	MS.gene98467	PPI
MS.gene44083	MS.gene042614	PPI
MS.gene042614	MS.gene62249	PPI
MS.gene013193	MS.gene042614	PPI
MS.gene042614	MS.gene024522	PPI
MS.gene08106	MS.gene042614	PPI
MS.gene042614	MS.gene22111	PPI
MS.gene042614	MS.gene049610	PPI
MS.gene042614	MS.gene010290	PPI
MS.gene042614	MS.gene37955	PPI
MS.gene042614	MS.gene92517	PPI
MS.gene042614	MS.gene36069	PPI
MS.gene042614	MS.gene045875	PPI
MS.gene042614	MS.gene84790	PPI
MS.gene042614	MS.gene044729	PPI
MS.gene23521	MS.gene042614	PPI
MS.gene042614	MS.gene60390	PPI
MS.gene042614	MS.gene039692	PPI
MS.gene042614	MS.gene55682	PPI
MS.gene042614	MS.gene002590	PPI
MS.gene042614	MS.gene41979	PPI
MS.gene87529	MS.gene042614	PPI
MS.gene024405	MS.gene042614	PPI
MS.gene012748	MS.gene042614	PPI
MS.gene04134	MS.gene042614	PPI
MS.gene062067	MS.gene042614	PPI
MS.gene042614	MS.gene77990	PPI
MS.gene042614	MS.gene65546	PPI
MS.gene042614	MS.gene062511	PPI
MS.gene57044	MS.gene042614	PPI
MS.gene042614	MS.gene059269	PPI
MS.gene042614	MS.gene057934	PPI
MS.gene038676	MS.gene042614	PPI
MS.gene042614	MS.gene024841	PPI
MS.gene042651	MS.gene042614	PPI
MS.gene042614	MS.gene76420	PPI
MS.gene042614	MS.gene46353	PPI
MS.gene042614	MS.gene40828	PPI
MS.gene042614	MS.gene51799	PPI
MS.gene042614	MS.gene98471	PPI
MS.gene042614	MS.gene29406	PPI
MS.gene042614	MS.gene09023	PPI
MS.gene042614	MS.gene025987	PPI
MS.gene042614	MS.gene95960	PPI
MS.gene042614	MS.gene043140	PPI
MS.gene042614	MS.gene041264	PPI
MS.gene042614	MS.gene03149	PPI
MS.gene071784	MS.gene042614	PPI
MS.gene042614	MS.gene29321	PPI
MS.gene071320	MS.gene042614	PPI
MS.gene42903	MS.gene042614	PPI
MS.gene81712	MS.gene042614	PPI
MS.gene042614	MS.gene025401	PPI
MS.gene042614	MS.gene015093	PPI
MS.gene048747	MS.gene042614	PPI
MS.gene042614	MS.gene24278	PPI
MS.gene042614	MS.gene000379	PPI
MS.gene042614	MS.gene34618	PPI
MS.gene042614	MS.gene59460	PPI
MS.gene042559	MS.gene042614	PPI
MS.gene22200	MS.gene042614	PPI
MS.gene042614	MS.gene66650	PPI
MS.gene042614	MS.gene009121	PPI
MS.gene26038	MS.gene042614	PPI
MS.gene042614	MS.gene08713	PPI
MS.gene042614	MS.gene70932	PPI
MS.gene85308	MS.gene042614	PPI
MS.gene042614	MS.gene09517	PPI
MS.gene042614	MS.gene87845	PPI
MS.gene042614	MS.gene024405	PPI
MS.gene031967	MS.gene042614	PPI
MS.gene042614	MS.gene85308	PPI
MS.gene34812	MS.gene042614	PPI
MS.gene02896	MS.gene042614	PPI
MS.gene063214	MS.gene042614	PPI
MS.gene042614	MS.gene58419	PPI
MS.gene042614	MS.gene26844	PPI
MS.gene97410	MS.gene042614	PPI
MS.gene042614	MS.gene64178	PPI
MS.gene32415	MS.gene042614	PPI
MS.gene035626	MS.gene042614	PPI
MS.gene042614	MS.gene074257	PPI
MS.gene067340	MS.gene042614	PPI
MS.gene042614	MS.gene021555	PPI
MS.gene042614	MS.gene44144	PPI
MS.gene65623	MS.gene042614	PPI
MS.gene042614	MS.gene05576	PPI
MS.gene042614	MS.gene060718	PPI
MS.gene71675	MS.gene042614	PPI
MS.gene69495	MS.gene042614	PPI
MS.gene049512	MS.gene042614	PPI
MS.gene042614	MS.gene48477	PPI
MS.gene038623	MS.gene042614	PPI
MS.gene05357	MS.gene042614	PPI
MS.gene042614	MS.gene027169	PPI
MS.gene042614	MS.gene004417	PPI
MS.gene032311	MS.gene042614	PPI
MS.gene042614	MS.gene81712	PPI
MS.gene042614	MS.gene019177	PPI
MS.gene86849	MS.gene042614	PPI
MS.gene042614	MS.gene005120	PPI
MS.gene042614	MS.gene055560	PPI
MS.gene042614	MS.gene024297	PPI
MS.gene042614	MS.gene054652	PPI
MS.gene39956	MS.gene042614	PPI
MS.gene042614	MS.gene000634	PPI
MS.gene042614	MS.gene37537	PPI
MS.gene021968	MS.gene042614	PPI
MS.gene042614	MS.gene069786	PPI
MS.gene09589	MS.gene042614	PPI
MS.gene042614	MS.gene42010	PPI
MS.gene042614	MS.gene025158	PPI
MS.gene042614	MS.gene27329	PPI
MS.gene43393	MS.gene042614	PPI
MS.gene042614	MS.gene41393	PPI
MS.gene34197	MS.gene042614	PPI
MS.gene042614	MS.gene016632	PPI
MS.gene042614	MS.gene018474	PPI
MS.gene005120	MS.gene042614	PPI
MS.gene042614	MS.gene40469	PPI
MS.gene042614	MS.gene96163	PPI
MS.gene048072	MS.gene042614	PPI
MS.gene060386	MS.gene042614	PPI
MS.gene71588	MS.gene042614	PPI
MS.gene04749	MS.gene042614	PPI
MS.gene05436	MS.gene042614	PPI
MS.gene059736	MS.gene042614	PPI
MS.gene70932	MS.gene042614	PPI
MS.gene35175	MS.gene042614	PPI
MS.gene021965	MS.gene042614	PPI
MS.gene055683	MS.gene042614	PPI
MS.gene042614	MS.gene037049	PPI
MS.gene042614	MS.gene026680	PPI
MS.gene042614	MS.gene61499	PPI
MS.gene021555	MS.gene042614	PPI
MS.gene042614	MS.gene019165	PPI
MS.gene042614	MS.gene81194	PPI
MS.gene042614	MS.gene060773	PPI
MS.gene042614	MS.gene038394	PPI
MS.gene009121	MS.gene042614	PPI
MS.gene042614	MS.gene019001	PPI
MS.gene94654	MS.gene042614	PPI
MS.gene042614	MS.gene53904	PPI
MS.gene042614	MS.gene24070	PPI
MS.gene042614	MS.gene73261	PPI
MS.gene042614	MS.gene85538	PPI
MS.gene042614	MS.gene025675	PPI
MS.gene83772	MS.gene042614	PPI
MS.gene042614	MS.gene055546	PPI
MS.gene042614	MS.gene71637	PPI
MS.gene042614	MS.gene55209	PPI
MS.gene008927	MS.gene042614	PPI
MS.gene042614	MS.gene96174	PPI
MS.gene045614	MS.gene042614	PPI
MS.gene96541	MS.gene042614	PPI
MS.gene042614	MS.gene073573	PPI
MS.gene000634	MS.gene042614	PPI
MS.gene042614	MS.gene28718	PPI
MS.gene63762	MS.gene042614	PPI
MS.gene30208	MS.gene042614	PPI
MS.gene025873	MS.gene042614	PPI
MS.gene042614	MS.gene63743	PPI
MS.gene013676	MS.gene042614	PPI
MS.gene042614	MS.gene068629	PPI
MS.gene05358	MS.gene042614	PPI
MS.gene042614	MS.gene009781	PPI
MS.gene030090	MS.gene042614	PPI
MS.gene95561	MS.gene042614	PPI
MS.gene96174	MS.gene042614	PPI
MS.gene018196	MS.gene042614	PPI
MS.gene042614	MS.gene048342	PPI
MS.gene065627	MS.gene042614	PPI
MS.gene57019	MS.gene042614	PPI
MS.gene018745	MS.gene042614	PPI
MS.gene042614	MS.gene21066	PPI
MS.gene65546	MS.gene042614	PPI
MS.gene042614	MS.gene009213	PPI
MS.gene042614	MS.gene013890	PPI
MS.gene042614	MS.gene98127	PPI
MS.gene042614	MS.gene073582	PPI
MS.gene042614	MS.gene003264	PPI
MS.gene038098	MS.gene042614	PPI
MS.gene042614	MS.gene048706	PPI
MS.gene60059	MS.gene042614	PPI
MS.gene042614	MS.gene45083	PPI
MS.gene042614	MS.gene049561	PPI
MS.gene042614	MS.gene008658	PPI
MS.gene28545	MS.gene042614	PPI
MS.gene042614	MS.gene80362	PPI
MS.gene042614	MS.gene49057	PPI
MS.gene042614	MS.gene89815	PPI
MS.gene008275	MS.gene042614	PPI
MS.gene042614	MS.gene048088	PPI
MS.gene042614	MS.gene86868	PPI
MS.gene064966	MS.gene042614	PPI
MS.gene042614	MS.gene058889	PPI
MS.gene042614	MS.gene034643	PPI
MS.gene046089	MS.gene042614	PPI
MS.gene047954	MS.gene042614	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene042614.t1	MTR_3g053920	48.661	224	74	3	1	209	83	280	4.18e-52	171
MS.gene042614.t1	MTR_8g463110	66.667	120	40	0	152	271	1	120	1.25e-38	143

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 69 sgRNAs with CRISPR-Local

Find 97 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCGGCTTCTAATTTGATTAC+TGG	0.270991	5.2:-46962959	MS.gene042614:CDS
CATTGGCAGCGCCACTTGTA+TGG	0.320012	5.2:+46963140	None:intergenic
GACTCCTCAGAGTTAGCATT+TGG	0.346452	5.2:+46962899	None:intergenic
GGTGAAGGAAATCTTGTAAT+AGG	0.354095	5.2:-46962788	MS.gene042614:CDS
CGCGGCACAGCAGAGGGTAT+TGG	0.359383	5.2:+46963205	None:intergenic
GCGGCACAGCAGAGGGTATT+GGG	0.376991	5.2:+46963206	None:intergenic
TCAACGATGGTGTACGCAAT+TGG	0.382810	5.2:-46963294	MS.gene042614:CDS
TTTGATTACTGGTTGTCCTT+TGG	0.383115	5.2:-46962948	MS.gene042614:CDS
AATTCCAACTCGAACAAATC+CGG	0.401725	5.2:+46963316	None:intergenic
ACTGGTTGTCCTTTGGTGCT+CGG	0.402188	5.2:-46962941	MS.gene042614:CDS
GAAGAAGCAGGCTTCAAGTC+AGG	0.403741	5.2:+46963268	None:intergenic
AATTGAGTTACGGACATCAT+AGG	0.412616	5.2:+46963506	None:intergenic
GCCAAAGCAAAACATGGTTC+TGG	0.415532	5.2:-46963034	MS.gene042614:CDS
TATTAGCAGCAGAACGAATA+CGG	0.441239	5.2:+46963245	None:intergenic
CAACGATGGTGTACGCAATT+GGG	0.442605	5.2:-46963293	MS.gene042614:CDS
CAGGGTATAAATAGCAATCT+AGG	0.447039	5.2:-46963540	MS.gene042614:CDS
GCCACTGCTCCTTTGAAGAA+TGG	0.449021	5.2:-46963447	MS.gene042614:CDS
TTGGTGCTCGGATTACCTGC+TGG	0.450819	5.2:-46962929	MS.gene042614:CDS
GTTCTGCTGCTAATAACAAA+TGG	0.473309	5.2:-46963237	MS.gene042614:CDS
TGTTACAGGTGTGGTTTGCT+TGG	0.473815	5.2:-46963358	MS.gene042614:intron
AGGATGATGGCTCTTCATAA+TGG	0.484877	5.2:-46962839	MS.gene042614:CDS
ACGGACTTTCAACCGCATAT+AGG	0.485165	5.2:+46963476	None:intergenic
GAGGAGTCTCAAGATGCTAC+TGG	0.487924	5.2:-46962884	MS.gene042614:CDS
CTACATCATTTGCTGCTGAT+GGG	0.487952	5.2:-46962811	MS.gene042614:CDS
ACTACATCATTTGCTGCTGA+TGG	0.504564	5.2:-46962812	MS.gene042614:CDS
GCATTTGGAAACGGTCCAGC+AGG	0.514131	5.2:+46962914	None:intergenic
TTCTTCTTCCACAGGTACCT+CGG	0.517778	5.2:-46962978	MS.gene042614:CDS
ATTGGCAGCGCCACTTGTAT+GGG	0.521231	5.2:+46963141	None:intergenic
ACAGACTTTCCATTCTTCAA+AGG	0.539193	5.2:+46963438	None:intergenic
AGGTACTGTGAATTGAGTTA+CGG	0.541155	5.2:+46963496	None:intergenic
TTGCCCGGATTTGTTCGAGT+TGG	0.543523	5.2:-46963320	MS.gene042614:CDS
ACACACAGACAAAGTTTGCC+CGG	0.544658	5.2:-46963335	MS.gene042614:CDS
TACATCATTTGCTGCTGATG+GGG	0.545658	5.2:-46962810	MS.gene042614:CDS
ATTCCAACTCGAACAAATCC+GGG	0.547472	5.2:+46963317	None:intergenic
TCAGAGTTAGCATTTGGAAA+CGG	0.549711	5.2:+46962905	None:intergenic
AAGGAGCAGTGGCATTGATA+CGG	0.550294	5.2:+46963457	None:intergenic
ATTAGCAGCAGAACGAATAC+GGG	0.553476	5.2:+46963246	None:intergenic
TAGGAACAAATGTTAGTCGT+GGG	0.555722	5.2:-46962769	MS.gene042614:CDS
TCCATTCTTCAAAGGAGCAG+TGG	0.556637	5.2:+46963446	None:intergenic
CCTGCTGGTGTGTCTCATGT+TGG	0.558690	5.2:-46963172	MS.gene042614:CDS
GAACGAATACGGGAAGAAGC+AGG	0.560605	5.2:+46963256	None:intergenic
GAGGTACCTGTGGAAGAAGA+AGG	0.563247	5.2:+46962980	None:intergenic
CCGCGCCACCATGTACCTGC+TGG	0.566092	5.2:-46963187	MS.gene042614:CDS
AAGAAGCAGGCTTCAAGTCA+GGG	0.569130	5.2:+46963269	None:intergenic
GTCACTGAAAGTTACAGCAT+TGG	0.571105	5.2:+46963123	None:intergenic
TGGTGGCGCGGCACAGCAGA+GGG	0.580282	5.2:+46963199	None:intergenic
ATGGTGGCGCGGCACAGCAG+AGG	0.586786	5.2:+46963198	None:intergenic
GTCATGGATCGTATCCAACC+TGG	0.588594	5.2:-46963654	MS.gene042614:CDS
TTTCAGTGACTGTATGCTTG+CGG	0.599794	5.2:-46963110	MS.gene042614:CDS
CCAACATGAGACACACCAGC+AGG	0.601219	5.2:+46963172	None:intergenic
ATAGGAACAAATGTTAGTCG+TGG	0.601283	5.2:-46962770	MS.gene042614:CDS
GAGACACACCAGCAGGTACA+TGG	0.604839	5.2:+46963179	None:intergenic
TGAAAATTATCGTACAGCCA+TGG	0.609399	5.2:+46963681	None:intergenic
AACATTGCCAAAGCAAAACA+TGG	0.613835	5.2:-46963040	MS.gene042614:CDS
CCAGCAGGTACATGGTGGCG+CGG	0.614905	5.2:+46963187	None:intergenic
GGAACAAATGTTAGTCGTGG+GGG	0.620199	5.2:-46962767	MS.gene042614:CDS
ATTAGAAGCCGAGGTACCTG+TGG	0.621664	5.2:+46962970	None:intergenic
ATCTAGGGACGACACCAGGT+TGG	0.621826	5.2:+46963640	None:intergenic
AGTAATCAAATTAGAAGCCG+AGG	0.623628	5.2:+46962961	None:intergenic
TTCGAGTTGGAATTCAACGA+TGG	0.626874	5.2:-46963307	MS.gene042614:CDS
ACATCATTTGCTGCTGATGG+GGG	0.646184	5.2:-46962809	MS.gene042614:CDS
AGGAACAAATGTTAGTCGTG+GGG	0.646490	5.2:-46962768	MS.gene042614:CDS
GCAGGTAATCCGAGCACCAA+AGG	0.647768	5.2:+46962932	None:intergenic
ATAGATCTAGGGACGACACC+AGG	0.648846	5.2:+46963636	None:intergenic
GGTCGAAACTCCCATACAAG+TGG	0.654131	5.2:-46963151	MS.gene042614:CDS
GAACAAATGTTAGTCGTGGG+GGG	0.666053	5.2:-46962766	MS.gene042614:CDS
CAATTCACAGTACCTATATG+CGG	0.706438	5.2:-46963488	MS.gene042614:CDS
GTTTCCAAATGCTAACTCTG+AGG	0.709040	5.2:-46962903	MS.gene042614:CDS
ACACACCAGCAGGTACATGG+TGG	0.724022	5.2:+46963182	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATGGATCGTCATTAAAAATA+CGG	+	chr5.2:46962768-46962787	None:intergenic	25.0%
!	CTGAATTAAAAAAGAGAAAG+AGG	-	chr5.2:46963606-46963625	MS.gene042614:intron	25.0%
	AAAAAAGAGAAAGAGGATGA+TGG	-	chr5.2:46963613-46963632	MS.gene042614:intron	30.0%
	TGGATCGTCATTAAAAATAC+GGG	+	chr5.2:46962767-46962786	None:intergenic	30.0%
!	CGATAATTTTCATATCGTCA+TGG	-	chr5.2:46962795-46962814	MS.gene042614:CDS	30.0%
!	TTTTGCTTTGGCAATGTTTT+GGG	+	chr5.2:46963423-46963442	None:intergenic	30.0%
!!	GTATTTTTAATGACGATCCA+TGG	-	chr5.2:46962767-46962786	MS.gene042614:CDS	30.0%
!!!	AACTCGTAGTTTTTTGTTAC+AGG	-	chr5.2:46963093-46963112	MS.gene042614:CDS	30.0%
	AACATTGCCAAAGCAAAACA+TGG	-	chr5.2:46963425-46963444	MS.gene042614:intron	35.0%
	AATTCCAACTCGAACAAATC+CGG	+	chr5.2:46963152-46963171	None:intergenic	35.0%
	AATTGAGTTACGGACATCAT+AGG	+	chr5.2:46962962-46962981	None:intergenic	35.0%
	ACAGACTTTCCATTCTTCAA+AGG	+	chr5.2:46963030-46963049	None:intergenic	35.0%
	AGTAATCAAATTAGAAGCCG+AGG	+	chr5.2:46963507-46963526	None:intergenic	35.0%
	ATAGGAACAAATGTTAGTCG+TGG	-	chr5.2:46963695-46963714	MS.gene042614:CDS	35.0%
	ATTCGGTTGAATATAGCCAA+AGG	+	chr5.2:46962899-46962918	None:intergenic	35.0%
	CAATTCACAGTACCTATATG+CGG	-	chr5.2:46962977-46962996	MS.gene042614:CDS	35.0%
	CAGGGTATAAATAGCAATCT+AGG	-	chr5.2:46962925-46962944	MS.gene042614:CDS	35.0%
	GGTGAAGGAAATCTTGTAAT+AGG	-	chr5.2:46963677-46963696	MS.gene042614:CDS	35.0%
	GTTCTGCTGCTAATAACAAA+TGG	-	chr5.2:46963228-46963247	MS.gene042614:CDS	35.0%
	TAGGAACAAATGTTAGTCGT+GGG	-	chr5.2:46963696-46963715	MS.gene042614:CDS	35.0%
	TATTAGCAGCAGAACGAATA+CGG	+	chr5.2:46963223-46963242	None:intergenic	35.0%
	TCAGAGTTAGCATTTGGAAA+CGG	+	chr5.2:46963563-46963582	None:intergenic	35.0%
	TCGGCTTCTAATTTGATTAC+TGG	-	chr5.2:46963506-46963525	MS.gene042614:CDS	35.0%
	TGAAAATTATCGTACAGCCA+TGG	+	chr5.2:46962787-46962806	None:intergenic	35.0%
	TGTAACTTAAGCACCATTAC+TGG	+	chr5.2:46963054-46963073	None:intergenic	35.0%
	TTTATACCCTGACCAACATT+CGG	+	chr5.2:46962916-46962935	None:intergenic	35.0%
!	AGGTACTGTGAATTGAGTTA+CGG	+	chr5.2:46962972-46962991	None:intergenic	35.0%
!	GTTTTGCTTTGGCAATGTTT+TGG	+	chr5.2:46963424-46963443	None:intergenic	35.0%
!	TTTGATTACTGGTTGTCCTT+TGG	-	chr5.2:46963517-46963536	MS.gene042614:CDS	35.0%
!	TTTTTACCTTCTTCTTCCAC+AGG	-	chr5.2:46963479-46963498	MS.gene042614:CDS	35.0%
!!!	GTAGTTTTTTGTTACAGGTG+TGG	-	chr5.2:46963098-46963117	MS.gene042614:CDS	35.0%
	AGGAACAAATGTTAGTCGTG+GGG	-	chr5.2:46963697-46963716	MS.gene042614:CDS	40.0%
	ATCTATCGACCTGAACCATT+TGG	-	chr5.2:46962846-46962865	MS.gene042614:CDS	40.0%
	ATTAGCAGCAGAACGAATAC+GGG	+	chr5.2:46963222-46963241	None:intergenic	40.0%
	ATTCAACCGAATGTTGGTCA+GGG	-	chr5.2:46962907-46962926	MS.gene042614:CDS	40.0%
	ATTCCAACTCGAACAAATCC+GGG	+	chr5.2:46963151-46963170	None:intergenic	40.0%
	CCATTTGGACATCTAGGTTT+AGG	-	chr5.2:46962861-46962880	MS.gene042614:CDS	40.0%
	CCTAAACCTAGATGTCCAAA+TGG	+	chr5.2:46962864-46962883	None:intergenic	40.0%
	GGCTATATTCAACCGAATGT+TGG	-	chr5.2:46962901-46962920	MS.gene042614:CDS	40.0%
	GTCACTGAAAGTTACAGCAT+TGG	+	chr5.2:46963345-46963364	None:intergenic	40.0%
	GTTTCCAAATGCTAACTCTG+AGG	-	chr5.2:46963562-46963581	MS.gene042614:intron	40.0%
	TATTCAACCGAATGTTGGTC+AGG	-	chr5.2:46962906-46962925	MS.gene042614:CDS	40.0%
	TTTCAGTGACTGTATGCTTG+CGG	-	chr5.2:46963355-46963374	MS.gene042614:intron	40.0%
!	ACCAGAACCATGTTTTGCTT+TGG	+	chr5.2:46963435-46963454	None:intergenic	40.0%
!	ACTACATCATTTGCTGCTGA+TGG	-	chr5.2:46963653-46963672	MS.gene042614:CDS	40.0%
!	AGGATGATGGCTCTTCATAA+TGG	-	chr5.2:46963626-46963645	MS.gene042614:intron	40.0%
!	CTACATCATTTGCTGCTGAT+GGG	-	chr5.2:46963654-46963673	MS.gene042614:CDS	40.0%
!	TACATCATTTGCTGCTGATG+GGG	-	chr5.2:46963655-46963674	MS.gene042614:CDS	40.0%
!!	TTCGAGTTGGAATTCAACGA+TGG	-	chr5.2:46963158-46963177	MS.gene042614:CDS	40.0%
	AAGAAGCAGGCTTCAAGTCA+GGG	+	chr5.2:46963199-46963218	None:intergenic	45.0%
	ACACACAGACAAAGTTTGCC+CGG	-	chr5.2:46963130-46963149	MS.gene042614:CDS	45.0%
	ACGGACTTTCAACCGCATAT+AGG	+	chr5.2:46962992-46963011	None:intergenic	45.0%
	CAACGATGGTGTACGCAATT+GGG	-	chr5.2:46963172-46963191	MS.gene042614:CDS	45.0%
	CCTAGATGTCCAAATGGTTC+AGG	+	chr5.2:46962858-46962877	None:intergenic	45.0%
	CCTGAACCATTTGGACATCT+AGG	-	chr5.2:46962855-46962874	MS.gene042614:CDS	45.0%
	GAACAAATGTTAGTCGTGGG+GGG	-	chr5.2:46963699-46963718	MS.gene042614:CDS	45.0%
	GACTCCTCAGAGTTAGCATT+TGG	+	chr5.2:46963569-46963588	None:intergenic	45.0%
	GCCAAAGCAAAACATGGTTC+TGG	-	chr5.2:46963431-46963450	MS.gene042614:intron	45.0%
	GGAACAAATGTTAGTCGTGG+GGG	-	chr5.2:46963698-46963717	MS.gene042614:CDS	45.0%
	GGTTCAGGTCGATAGATCTA+GGG	+	chr5.2:46962843-46962862	None:intergenic	45.0%
	TAGGTTCACGATCTCTCCTT+TGG	-	chr5.2:46962880-46962899	MS.gene042614:CDS	45.0%
	TCAACGATGGTGTACGCAAT+TGG	-	chr5.2:46963171-46963190	MS.gene042614:CDS	45.0%
	TCCATTCTTCAAAGGAGCAG+TGG	+	chr5.2:46963022-46963041	None:intergenic	45.0%
	TGGAAAGTCTGTGCCAGTAA+TGG	-	chr5.2:46963038-46963057	MS.gene042614:CDS	45.0%
	TGGTTCAGGTCGATAGATCT+AGG	+	chr5.2:46962844-46962863	None:intergenic	45.0%
	TTCTTCTTCCACAGGTACCT+CGG	-	chr5.2:46963487-46963506	MS.gene042614:CDS	45.0%
!	ACATCATTTGCTGCTGATGG+GGG	-	chr5.2:46963656-46963675	MS.gene042614:CDS	45.0%
!!	AAGGAGCAGTGGCATTGATA+CGG	+	chr5.2:46963011-46963030	None:intergenic	45.0%
!!	TGTTACAGGTGTGGTTTGCT+TGG	-	chr5.2:46963107-46963126	MS.gene042614:CDS	45.0%
	ATAGATCTAGGGACGACACC+AGG	+	chr5.2:46962832-46962851	None:intergenic	50.0%
	ATTGGCAGCGCCACTTGTAT+GGG	+	chr5.2:46963327-46963346	None:intergenic	50.0%
	GAACGAATACGGGAAGAAGC+AGG	+	chr5.2:46963212-46963231	None:intergenic	50.0%
	GAAGAAGCAGGCTTCAAGTC+AGG	+	chr5.2:46963200-46963219	None:intergenic	50.0%
	GAGGAGTCTCAAGATGCTAC+TGG	-	chr5.2:46963581-46963600	MS.gene042614:intron	50.0%
	GGTCGAAACTCCCATACAAG+TGG	-	chr5.2:46963314-46963333	MS.gene042614:CDS	50.0%
	GTCATGGATCGTATCCAACC+TGG	-	chr5.2:46962811-46962830	MS.gene042614:CDS	50.0%
!	ATTAGAAGCCGAGGTACCTG+TGG	+	chr5.2:46963498-46963517	None:intergenic	50.0%
!	GAGGTACCTGTGGAAGAAGA+AGG	+	chr5.2:46963488-46963507	None:intergenic	50.0%
!	GCCACTGCTCCTTTGAAGAA+TGG	-	chr5.2:46963018-46963037	MS.gene042614:CDS	50.0%
!	TTGCCCGGATTTGTTCGAGT+TGG	-	chr5.2:46963145-46963164	MS.gene042614:CDS	50.0%
!!	ACTGGTTGTCCTTTGGTGCT+CGG	-	chr5.2:46963524-46963543	MS.gene042614:CDS	50.0%
	ACACACCAGCAGGTACATGG+TGG	+	chr5.2:46963286-46963305	None:intergenic	55.0%
	ATCTAGGGACGACACCAGGT+TGG	+	chr5.2:46962828-46962847	None:intergenic	55.0%
	CATTGGCAGCGCCACTTGTA+TGG	+	chr5.2:46963328-46963347	None:intergenic	55.0%
	CCAACATGAGACACACCAGC+AGG	+	chr5.2:46963296-46963315	None:intergenic	55.0%
	CCTGCTGGTGTGTCTCATGT+TGG	-	chr5.2:46963293-46963312	MS.gene042614:CDS	55.0%
	GAGACACACCAGCAGGTACA+TGG	+	chr5.2:46963289-46963308	None:intergenic	55.0%
	GCAGGTAATCCGAGCACCAA+AGG	+	chr5.2:46963536-46963555	None:intergenic	55.0%
	GCATTTGGAAACGGTCCAGC+AGG	+	chr5.2:46963554-46963573	None:intergenic	55.0%
	TTTGCTGCTGATGGGGGTGA+AGG	-	chr5.2:46963662-46963681	MS.gene042614:CDS	55.0%
!	TTGGTGCTCGGATTACCTGC+TGG	-	chr5.2:46963536-46963555	MS.gene042614:CDS	55.0%
!!	GCGGCACAGCAGAGGGTATT+GGG	+	chr5.2:46963262-46963281	None:intergenic	60.0%
!	CCAGCAGGTACATGGTGGCG+CGG	+	chr5.2:46963281-46963300	None:intergenic	65.0%
!	CGCGGCACAGCAGAGGGTAT+TGG	+	chr5.2:46963263-46963282	None:intergenic	65.0%
	CCGCGCCACCATGTACCTGC+TGG	-	chr5.2:46963278-46963297	MS.gene042614:CDS	70.0%
!	ATGGTGGCGCGGCACAGCAG+AGG	+	chr5.2:46963270-46963289	None:intergenic	70.0%
!	TGGTGGCGCGGCACAGCAGA+GGG	+	chr5.2:46963269-46963288	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.2	gene	46962754	46963733	46962754	ID=MS.gene042614
chr5.2	mRNA	46962754	46963733	46962754	ID=MS.gene042614.t1;Parent=MS.gene042614
chr5.2	exon	46963650	46963733	46963650	ID=MS.gene042614.t1.exon1;Parent=MS.gene042614.t1
chr5.2	CDS	46963650	46963733	46963650	ID=cds.MS.gene042614.t1;Parent=MS.gene042614.t1
chr5.2	exon	46963444	46963559	46963444	ID=MS.gene042614.t1.exon2;Parent=MS.gene042614.t1
chr5.2	CDS	46963444	46963559	46963444	ID=cds.MS.gene042614.t1;Parent=MS.gene042614.t1
chr5.2	exon	46962754	46963372	46962754	ID=MS.gene042614.t1.exon3;Parent=MS.gene042614.t1
chr5.2	CDS	46962754	46963372	46962754	ID=cds.MS.gene042614.t1;Parent=MS.gene042614.t1

Gene Sequence

>MS.gene042614

ATGGATGCTGCCCGTATTTTTAATGACGATCCATGGCTGTACGATAATTTTCATATCGTCATGGATCGTATCCAACCTGGTGTCGTCCCTAGATCTATCGACCTGAACCATTTGGACATCTAGGTTTAGGTTCACGATCTCTCCTTTGGCTATATTCAACCGAATGTTGGTCAGGGTATAAATAGCAATCTAGGTGAACTCAAATCCTATGATGTCCGTAACTCAATTCACAGTACCTATATGCGGTTGAAAGTCCGTATCAATGCCACTGCTCCTTTGAAGAATGGAAAGTCTGTGCCAGTAATGGTGCTTAAGTTACAGTTAAATTCAAATATGAGAAACTCGTAGTTTTTTGTTACAGGTGTGGTTTGCTTGGACACACAGACAAAGTTTGCCCGGATTTGTTCGAGTTGGAATTCAACGATGGTGTACGCAATTGGGTCCCTGACTTGAAGCCTGCTTCTTCCCGTATTCGTTCTGCTGCTAATAACAAATGGTTGTCAGACCCAATACCCTCTGCTGTGCCGCGCCACCATGTACCTGCTGGTGTGTCTCATGTTGGTCGAAACTCCCATACAAGTGGCGCTGCCAATGCTGTAACTTTCAGTGACTGTATGCTTGCGGTTGACAATCAAATTTCTGCTCTCAAACATGATGTACTTGCTGCCCAAAACATTGCCAAAGCAAAACATGGTTCTGGTGCTAACTTTTCTTGTCAGATGCAATTTTTACCTTCTTCTTCCACAGGTACCTCGGCTTCTAATTTGATTACTGGTTGTCCTTTGGTGCTCGGATTACCTGCTGGACCGTTTCCAAATGCTAACTCTGAGGAGTCTCAAGATGCTACTGGTTCTGAATTAAAAAAGAGAAAGAGGATGATGGCTCTTCATAATGGTGAAACTACATCATTTGCTGCTGATGGGGGTGAAGGAAATCTTGTAATAGGAACAAATGTTAGTCGTGGGGGGATGTTGATATGA

Protein sequence

>MS.gene042614.t1

MDAARIFNDDPWLYDNFHIVMDRIQPGVGINSNLGELKSYDVRNSIHSTYMRLKVRINATAPLKNGKCGLLGHTDKVCPDLFELEFNDGVRNWVPDLKPASSRIRSAANNKWLSDPIPSAVPRHHVPAGVSHVGRNSHTSGAANAVTFSDCMLAVDNQISALKHDVLAAQNIAKAKHGSGANFSCQMQFLPSSSTGTSASNLITGCPLVLGLPAGPFPNANSEESQDATGSELKKRKRMMALHNGETTSFAADGGEGNLVIGTNVSRGGMLI