Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58419.t1 | AES70414.1 | 53.2 | 346 | 93 | 4 | 1 | 343 | 1 | 280 | 6.70E-90 | 341.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58419.t1 | O04244 | 25.7 | 136 | 97 | 2 | 83 | 216 | 6 | 139 | 2.9e-09 | 64.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58419.t1 | G7J017 | 53.2 | 346 | 93 | 4 | 1 | 343 | 1 | 280 | 4.8e-90 | 341.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58419.t1 | MTR_3g053920 | 53.179 | 346 | 93 | 4 | 1 | 343 | 1 | 280 | 1.13e-113 | 335 |
MS.gene58419.t1 | MTR_2g061500 | 77.519 | 129 | 29 | 0 | 1 | 129 | 1 | 129 | 1.99e-70 | 219 |
MS.gene58419.t1 | MTR_7g011710 | 88.235 | 85 | 10 | 0 | 55 | 139 | 1 | 85 | 8.38e-49 | 164 |
MS.gene58419.t1 | MTR_4g103530 | 71.287 | 101 | 28 | 1 | 55 | 155 | 1 | 100 | 1.16e-45 | 157 |
MS.gene58419.t1 | MTR_6g033215 | 35.260 | 173 | 110 | 1 | 29 | 199 | 122 | 294 | 1.39e-35 | 133 |
MS.gene58419.t1 | MTR_0010s0370 | 34.302 | 172 | 107 | 3 | 11 | 177 | 7 | 177 | 1.63e-28 | 111 |
MS.gene58419.t1 | MTR_0010s0350 | 34.302 | 172 | 107 | 3 | 11 | 177 | 7 | 177 | 1.63e-28 | 111 |
MS.gene58419.t1 | MTR_8g463110 | 66.990 | 103 | 31 | 1 | 289 | 388 | 1 | 103 | 2.93e-27 | 115 |
MS.gene58419.t1 | MTR_1g036720 | 31.731 | 104 | 69 | 1 | 11 | 112 | 7 | 110 | 2.90e-13 | 66.2 |
MS.gene58419.t1 | MTR_7g106180 | 25.333 | 150 | 104 | 3 | 32 | 175 | 19 | 166 | 7.27e-13 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58419.t1 | AT2G17920 | 26.761 | 213 | 150 | 3 | 8 | 216 | 9 | 219 | 8.87e-19 | 87.0 |
MS.gene58419.t1 | AT5G36228 | 27.536 | 207 | 142 | 3 | 36 | 240 | 39 | 239 | 1.25e-18 | 87.4 |
MS.gene58419.t1 | AT2G41590 | 26.829 | 164 | 116 | 2 | 55 | 216 | 58 | 219 | 1.16e-16 | 81.6 |
MS.gene58419.t1 | AT3G57587 | 28.188 | 149 | 101 | 3 | 71 | 216 | 74 | 219 | 6.62e-16 | 79.3 |
MS.gene58419.t1 | AT5G25200 | 26.512 | 215 | 148 | 4 | 8 | 216 | 9 | 219 | 1.14e-15 | 78.6 |
MS.gene58419.t1 | AT5G18636 | 26.512 | 215 | 148 | 4 | 8 | 216 | 9 | 219 | 1.29e-15 | 78.6 |
MS.gene58419.t1 | AT2G02103 | 26.829 | 164 | 116 | 2 | 55 | 216 | 58 | 219 | 1.68e-15 | 78.2 |
MS.gene58419.t1 | AT2G13450 | 25.824 | 182 | 131 | 2 | 36 | 215 | 39 | 218 | 1.14e-14 | 75.9 |
MS.gene58419.t1 | AT3G31430 | 25.824 | 182 | 129 | 3 | 36 | 215 | 134 | 311 | 1.29e-14 | 75.1 |
MS.gene58419.t1 | AT3G47920 | 25.676 | 148 | 106 | 2 | 71 | 216 | 3 | 148 | 4.84e-13 | 70.1 |
Find 135 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACTCCTCAGAGTTGGTAAT+TGG | 0.242886 | 8.3:+15770229 | None:intergenic |
GTTCCGCTGCTAATAATAAA+TGG | 0.253881 | 8.3:-15770558 | MS.gene58419:CDS |
GTTTCAATTTCACCACAAAA+TGG | 0.274429 | 8.3:-15771055 | MS.gene58419:CDS |
CAGACTCGGTGGCTAGGTTA+AGG | 0.302707 | 8.3:+15771226 | None:intergenic |
GTGTATCTAAACATCGCTTT+AGG | 0.328089 | 8.3:-15769275 | MS.gene58419:intron |
CTTAGCTGACCGTGAGATTC+AGG | 0.332229 | 8.3:-15771163 | MS.gene58419:CDS |
TTGTTACCTTCTTCTTCTAT+AGG | 0.332854 | 8.3:-15770316 | MS.gene58419:CDS |
CAAGGCATAGGCAGCTTTCT+AGG | 0.333453 | 8.3:-15770865 | MS.gene58419:CDS |
CTGATGATGGTGTCCGCAAT+TGG | 0.338507 | 8.3:-15770615 | MS.gene58419:CDS |
GCAGGATTAGGCTTCAGGTC+AGG | 0.339579 | 8.3:+15770589 | None:intergenic |
GCTGGCCGCCCTTTGGTGCT+TGG | 0.347355 | 8.3:-15770271 | MS.gene58419:CDS |
GGGGCAACATTAACATAAAT+AGG | 0.349901 | 8.3:+15769312 | None:intergenic |
CTCGGCACAGCAGTAGGAAT+TGG | 0.352359 | 8.3:+15770526 | None:intergenic |
TTCTGTCGACTTGAACCATT+TGG | 0.355812 | 8.3:-15770944 | MS.gene58419:CDS |
AGCCATACGCTCACTGAAAT+AGG | 0.356045 | 8.3:+15771137 | None:intergenic |
TACGGGCAGGATTAGGCTTC+AGG | 0.356208 | 8.3:+15770584 | None:intergenic |
CCTATGCCTTGACCAACATT+TGG | 0.367628 | 8.3:+15770877 | None:intergenic |
CTTACTTGCTGGCCGCCCTT+TGG | 0.370582 | 8.3:-15770278 | MS.gene58419:CDS |
ACTTGAACCATTTGGACATA+TGG | 0.371083 | 8.3:-15770936 | MS.gene58419:CDS |
ATCCTTGATCACTGTTTGAT+TGG | 0.378099 | 8.3:-15771192 | MS.gene58419:CDS |
ACGATCGAAACACGCTTGCC+TGG | 0.389839 | 8.3:+15771102 | None:intergenic |
CAGGTTCACGGTCTTCCCTT+TGG | 0.395747 | 8.3:-15770910 | MS.gene58419:CDS |
GAACCAATACGGGCAGGATT+AGG | 0.402221 | 8.3:+15770577 | None:intergenic |
TCAGCTTCAAACTTACTTGC+TGG | 0.405901 | 8.3:-15770289 | MS.gene58419:CDS |
AGACTCGGTGGCTAGGTTAA+GGG | 0.413831 | 8.3:+15771227 | None:intergenic |
CAAAGGGAAGACCGTGAACC+TGG | 0.415175 | 8.3:+15770911 | None:intergenic |
ATGGCTCGTGCTTGGAAGCC+AGG | 0.426942 | 8.3:-15771120 | MS.gene58419:CDS |
TGATGATGGTGTCCGCAATT+GGG | 0.436404 | 8.3:-15770614 | MS.gene58419:CDS |
GGATACGGTCCATTACGATA+TGG | 0.437208 | 8.3:+15770986 | None:intergenic |
GACATATGGGTCCAGGTTCA+CGG | 0.437811 | 8.3:-15770922 | MS.gene58419:CDS |
TGTTTCAGGTGTGGTTTGCT+TGG | 0.440387 | 8.3:-15770679 | MS.gene58419:CDS |
CACCACTAGGAGGAGAGTTT+CGG | 0.446642 | 8.3:+15770470 | None:intergenic |
AATAGTGTTACGGACATCAT+AGG | 0.456763 | 8.3:+15770831 | None:intergenic |
AAGCCTAATCCTGCCCGTAT+TGG | 0.462034 | 8.3:-15770580 | MS.gene58419:CDS |
ATGAAATTTCACCATTCTGA+AGG | 0.462585 | 8.3:+15770158 | None:intergenic |
CAGGATTAGGCTTCAGGTCA+GGG | 0.464318 | 8.3:+15770590 | None:intergenic |
ATTTCATCATTTGCTGCTGA+TGG | 0.466311 | 8.3:-15770142 | MS.gene58419:CDS |
TATTAGCAGCGGAACCAATA+CGG | 0.472774 | 8.3:+15770566 | None:intergenic |
TCGGCACAGCAGTAGGAATT+GGG | 0.473536 | 8.3:+15770527 | None:intergenic |
AACAAGAAGGTCATGTTTGA+GGG | 0.473613 | 8.3:+15770390 | None:intergenic |
TTGTCCGGAGTTGTTCGAGC+TGG | 0.474275 | 8.3:-15770641 | MS.gene58419:CDS |
ACGGACTTTCAGACGCATAT+AGG | 0.475542 | 8.3:+15770801 | None:intergenic |
TGGCCTCACCCTTGCTGAAG+AGG | 0.475784 | 8.3:-15771256 | MS.gene58419:CDS |
TTTCATCATTTGCTGCTGAT+GGG | 0.478737 | 8.3:-15770141 | MS.gene58419:CDS |
GGCCTCACCCTTGCTGAAGA+GGG | 0.479040 | 8.3:-15771255 | MS.gene58419:CDS |
GCGCAGACGACATGTCAGTT+TGG | 0.481046 | 8.3:-15769152 | MS.gene58419:intron |
CAACAAGAAGGTCATGTTTG+AGG | 0.483349 | 8.3:+15770389 | None:intergenic |
CAAACAGTGATCAAGGATAG+TGG | 0.483405 | 8.3:+15771197 | None:intergenic |
CCTGCTGGTGTCTTTCATGC+TGG | 0.485754 | 8.3:-15770493 | MS.gene58419:CDS |
GAGGAGTCTCAAGATGCTAC+TGG | 0.487924 | 8.3:-15770214 | MS.gene58419:CDS |
GTAATTGGAAACGGTTCAGC+AGG | 0.488936 | 8.3:+15770244 | None:intergenic |
CCTGGACCCATATGTCCAAA+TGG | 0.490389 | 8.3:+15770929 | None:intergenic |
ACACACTGACAAAGTTTGTC+CGG | 0.500003 | 8.3:-15770656 | MS.gene58419:CDS |
GATACACAAGGCCGTGGTGT+GGG | 0.503369 | 8.3:+15769291 | None:intergenic |
CCATTTGGACATATGGGTCC+AGG | 0.504581 | 8.3:-15770929 | MS.gene58419:CDS |
CTTGAACCATTTGGACATAT+GGG | 0.505866 | 8.3:-15770935 | MS.gene58419:CDS |
CCGAGCCACTATGTTCCTGC+TGG | 0.508741 | 8.3:-15770508 | MS.gene58419:CDS |
CATAAGCACCATTACTAACT+CGG | 0.510210 | 8.3:+15770740 | None:intergenic |
CGATAATTTCCATATCGTAA+TGG | 0.512245 | 8.3:-15770995 | MS.gene58419:CDS |
GTGAGCGTATGGCTCGTGCT+TGG | 0.515599 | 8.3:-15771128 | MS.gene58419:CDS |
ATTAGCAGCGGAACCAATAC+GGG | 0.517620 | 8.3:+15770567 | None:intergenic |
GGGTGAGGCCAGCGATATTG+AGG | 0.519134 | 8.3:+15771268 | None:intergenic |
TCAGAGTTGGTAATTGGAAA+CGG | 0.522460 | 8.3:+15770235 | None:intergenic |
TGCCTATTTCAGTGAGCGTA+TGG | 0.524721 | 8.3:-15771139 | MS.gene58419:CDS |
ATTGAGGTGGGAAGGGTCCA+TGG | 0.525018 | 8.3:+15771284 | None:intergenic |
TTCATCATTTGCTGCTGATG+GGG | 0.534420 | 8.3:-15770140 | MS.gene58419:CDS |
CTGAACTGAAGAAGAGAAAG+AGG | 0.535515 | 8.3:-15770189 | MS.gene58419:CDS |
ATACACAAGGCCGTGGTGTG+GGG | 0.538349 | 8.3:+15769292 | None:intergenic |
GGTGAAATTGAAACAGAAAA+CGG | 0.538716 | 8.3:+15771064 | None:intergenic |
AACCCTCTTCAGCAAGGGTG+AGG | 0.538870 | 8.3:+15771253 | None:intergenic |
AGGTACTATGAATAGTGTTA+CGG | 0.539531 | 8.3:+15770821 | None:intergenic |
ACAGAAGTGGGGACAACACC+AGG | 0.541151 | 8.3:+15770961 | None:intergenic |
TTCGAGCTGGAGTCTGATGA+TGG | 0.541255 | 8.3:-15770628 | MS.gene58419:CDS |
TAGTGGCTCGGCACAGCAGT+AGG | 0.541285 | 8.3:+15770520 | None:intergenic |
GGCCAATCAAACAGTGATCA+AGG | 0.541425 | 8.3:+15771190 | None:intergenic |
TGGTTCAAGTCGACAGAAGT+GGG | 0.543153 | 8.3:+15770949 | None:intergenic |
GGACAACACCAGGCTGGATA+CGG | 0.543289 | 8.3:+15770971 | None:intergenic |
CCAAATGTTGGTCAAGGCAT+AGG | 0.543940 | 8.3:-15770877 | MS.gene58419:CDS |
GGTTGCATTCAACCAAATGT+TGG | 0.545080 | 8.3:-15770889 | MS.gene58419:CDS |
GTCAAAGCGAAACATGGCTC+CGG | 0.549165 | 8.3:-15770355 | MS.gene58419:CDS |
GACTCCAGCTCGAACAACTC+CGG | 0.551808 | 8.3:+15770637 | None:intergenic |
TTTGGTTGAATGCAACCAAA+GGG | 0.554402 | 8.3:+15770895 | None:intergenic |
TCAGGTCAGGGCCCCAATTG+CGG | 0.557468 | 8.3:+15770602 | None:intergenic |
ATGTTTCAGACTCGGTGGCT+AGG | 0.557537 | 8.3:+15771220 | None:intergenic |
AAGTGGGGACAACACCAGGC+TGG | 0.558202 | 8.3:+15770965 | None:intergenic |
GATGATGGTGTCCGCAATTG+GGG | 0.560110 | 8.3:-15770613 | MS.gene58419:CDS |
CCAGCATGAAAGACACCAGC+AGG | 0.562119 | 8.3:+15770493 | None:intergenic |
GGGTTAAACCCTCTTCAGCA+AGG | 0.563127 | 8.3:+15771247 | None:intergenic |
ATCTTGAGACTCCTCAGAGT+TGG | 0.563156 | 8.3:+15770222 | None:intergenic |
CAGGTAGTCCAAGCACCAAA+GGG | 0.564684 | 8.3:+15770263 | None:intergenic |
GAAGAAGAGAAAGAGGATGC+TGG | 0.568456 | 8.3:-15770182 | MS.gene58419:CDS |
AAGGAGCGGTGACATTAATA+CGG | 0.569148 | 8.3:+15770782 | None:intergenic |
CCTTCCCACCTCAATATCGC+TGG | 0.569995 | 8.3:-15771276 | MS.gene58419:CDS |
ATAGGATAGTGATCAGAAGC+AGG | 0.576456 | 8.3:+15769330 | None:intergenic |
AGATACACAAGGCCGTGGTG+TGG | 0.576761 | 8.3:+15769290 | None:intergenic |
AACAGTGTCAAAGCGAAACA+TGG | 0.576976 | 8.3:-15770361 | MS.gene58419:CDS |
GATTGTCAACAGCAAGCATA+CGG | 0.578956 | 8.3:+15770422 | None:intergenic |
CCAGCGATATTGAGGTGGGA+AGG | 0.579726 | 8.3:+15771276 | None:intergenic |
GCAGCGGAACCAATACGGGC+AGG | 0.580756 | 8.3:+15770571 | None:intergenic |
CAGCGATATTGAGGTGGGAA+GGG | 0.581963 | 8.3:+15771277 | None:intergenic |
CGGACCGTCATCAAGAATGC+GGG | 0.583338 | 8.3:+15771026 | None:intergenic |
CAAGTGTATCTGACAAGCAC+CGG | 0.585274 | 8.3:+15770336 | None:intergenic |
ATGGTTCAAGTCGACAGAAG+TGG | 0.586579 | 8.3:+15770948 | None:intergenic |
GAGTTACCTATAGAAGAAGA+AGG | 0.589211 | 8.3:+15770310 | None:intergenic |
AGGATGCTGGCCCTTCAGAA+TGG | 0.591615 | 8.3:-15770169 | MS.gene58419:CDS |
TACACAAGGCCGTGGTGTGG+GGG | 0.593524 | 8.3:+15769293 | None:intergenic |
ATTCAACCAAATGTTGGTCA+AGG | 0.595811 | 8.3:-15770883 | MS.gene58419:CDS |
TGAAATTTCACCATTCTGAA+GGG | 0.596074 | 8.3:+15770159 | None:intergenic |
CAACCATTTATTATTAGCAG+CGG | 0.602480 | 8.3:+15770555 | None:intergenic |
GCTGCCCGCATTCTTGATGA+CGG | 0.605798 | 8.3:-15771030 | MS.gene58419:CDS |
TGTTTAGATACACAAGGCCG+TGG | 0.609248 | 8.3:+15769285 | None:intergenic |
ATTTGGTTGAATGCAACCAA+AGG | 0.609384 | 8.3:+15770894 | None:intergenic |
TGGAAAGTCCGAGTTAGTAA+TGG | 0.609448 | 8.3:-15770748 | MS.gene58419:CDS |
TGAGGCCAGCGATATTGAGG+TGG | 0.610022 | 8.3:+15771271 | None:intergenic |
GATAGTGGATGTTTCAGACT+CGG | 0.611459 | 8.3:+15771212 | None:intergenic |
GCATTCTTGATGACGGTCCG+TGG | 0.613963 | 8.3:-15771023 | MS.gene58419:CDS |
GGTTAAACCCTCTTCAGCAA+GGG | 0.617085 | 8.3:+15771248 | None:intergenic |
GTAATGGACCGTATCCAGCC+TGG | 0.617163 | 8.3:-15770979 | MS.gene58419:CDS |
AATAGGCAGCCTGAATCTCA+CGG | 0.617647 | 8.3:+15771154 | None:intergenic |
GCAGGTAGTCCAAGCACCAA+AGG | 0.618179 | 8.3:+15770262 | None:intergenic |
TCATCATTTGCTGCTGATGG+GGG | 0.624594 | 8.3:-15770139 | MS.gene58419:intron |
CCAGCAGGAACATAGTGGCT+CGG | 0.625474 | 8.3:+15770508 | None:intergenic |
GGCCGAAACTCTCCTCCTAG+TGG | 0.633512 | 8.3:-15770472 | MS.gene58419:CDS |
ACAGCATTGACAGCACCACT+AGG | 0.637601 | 8.3:+15770457 | None:intergenic |
AGACACCAGCAGGAACATAG+TGG | 0.640185 | 8.3:+15770503 | None:intergenic |
GAGGCCAGCGATATTGAGGT+GGG | 0.647056 | 8.3:+15771272 | None:intergenic |
ACGGACCGTCATCAAGAATG+CGG | 0.654680 | 8.3:+15771025 | None:intergenic |
GCATTGACAGCACCACTAGG+AGG | 0.655539 | 8.3:+15770460 | None:intergenic |
GTAGTCCAAGCACCAAAGGG+CGG | 0.668886 | 8.3:+15770266 | None:intergenic |
TGGAAATTATCGTACAGCCA+CGG | 0.685964 | 8.3:+15771006 | None:intergenic |
GGTTCAAGTCGACAGAAGTG+GGG | 0.688223 | 8.3:+15770950 | None:intergenic |
AGTGGATGTTTCAGACTCGG+TGG | 0.691705 | 8.3:+15771215 | None:intergenic |
GTTTCCAATTACCAACTCTG+AGG | 0.709389 | 8.3:-15770233 | MS.gene58419:CDS |
TCTCACGGTCAGCTAAGACA+CGG | 0.715862 | 8.3:+15771169 | None:intergenic |
AAGCGATGTTTAGATACACA+AGG | 0.719194 | 8.3:+15769279 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CAATAATTTCAACAGTAATA+TGG | + | chr8.3:15770675-15770694 | None:intergenic | 20.0% |
!!! | ACTTTTAAATATGAGAAACT+TGG | - | chr8.3:15769693-15769712 | MS.gene58419:intron | 20.0% |
!!! | GAAGTTCTTCAATTTTATTT+CGG | + | chr8.3:15770537-15770556 | None:intergenic | 20.0% |
! | AAAGTTTCAACAATAGCATT+CGG | + | chr8.3:15771045-15771064 | None:intergenic | 25.0% |
! | CAATTATCTAACCAATTTAC+AGG | - | chr8.3:15770781-15770800 | MS.gene58419:CDS | 25.0% |
!!! | ACTTTCCATTCTTTTTTCAA+AGG | + | chr8.3:15769642-15769661 | None:intergenic | 25.0% |
!!! | GAAATTATTGATAGTGTTCT+TGG | - | chr8.3:15770685-15770704 | MS.gene58419:CDS | 25.0% |
AAACCATTAATAAGCCATGT+TGG | + | chr8.3:15770877-15770896 | None:intergenic | 30.0% | |
ACATATTATTTGCAAGAGCA+CGG | + | chr8.3:15771008-15771027 | None:intergenic | 30.0% | |
AGGTACTATGAATAGTGTTA+CGG | + | chr8.3:15769584-15769603 | None:intergenic | 30.0% | |
ATAGCCTCATAATAAGATCA+TGG | + | chr8.3:15771224-15771243 | None:intergenic | 30.0% | |
ATGAAATTTCACCATTCTGA+AGG | + | chr8.3:15770247-15770266 | None:intergenic | 30.0% | |
ATTAGGATAGCCATAATAAC+CGG | + | chr8.3:15770725-15770744 | None:intergenic | 30.0% | |
ATTGGTTAGATAATTGTCGA+AGG | + | chr8.3:15770777-15770796 | None:intergenic | 30.0% | |
CAACCATTTATTATTAGCAG+CGG | + | chr8.3:15769850-15769869 | None:intergenic | 30.0% | |
CGATAATTTCCATATCGTAA+TGG | - | chr8.3:15769407-15769426 | MS.gene58419:intron | 30.0% | |
CTCATAATAAGATCATGGTT+GGG | + | chr8.3:15771219-15771238 | None:intergenic | 30.0% | |
GGTGAAATTGAAACAGAAAA+CGG | + | chr8.3:15769341-15769360 | None:intergenic | 30.0% | |
GTTTCAATTTCACCACAAAA+TGG | - | chr8.3:15769347-15769366 | MS.gene58419:intron | 30.0% | |
TCACTTAGGAATAAGATATC+CGG | + | chr8.3:15770502-15770521 | None:intergenic | 30.0% | |
TGAAATTTCACCATTCTGAA+GGG | + | chr8.3:15770246-15770265 | None:intergenic | 30.0% | |
TGCTATTGTTGAAACTTTAG+TGG | - | chr8.3:15771047-15771066 | MS.gene58419:CDS | 30.0% | |
TTGTTACCTTCTTCTTCTAT+AGG | - | chr8.3:15770086-15770105 | MS.gene58419:intron | 30.0% | |
TTTACTTGGTTCAAAAGTCT+TGG | - | chr8.3:15770952-15770971 | MS.gene58419:CDS | 30.0% | |
! | AGACTTTTGAACCAAGTAAA+CGG | + | chr8.3:15770952-15770971 | None:intergenic | 30.0% |
! | ATAGGAACAAATGTTAGTCT+TGG | - | chr8.3:15770302-15770321 | MS.gene58419:CDS | 30.0% |
! | GTTTGATGACACTAATGTAA+TGG | - | chr8.3:15770361-15770380 | MS.gene58419:CDS | 30.0% |
!! | TAGGAACAAATGTTAGTCTT+GGG | - | chr8.3:15770303-15770322 | MS.gene58419:CDS | 30.0% |
!!! | AACTTGGAGTTTTTTGTTTC+AGG | - | chr8.3:15769709-15769728 | MS.gene58419:intron | 30.0% |
AAATCTCCGAAAATACACCA+GGG | + | chr8.3:15770808-15770827 | None:intergenic | 35.0% | |
AACAAGAAGGTCATGTTTGA+GGG | + | chr8.3:15770015-15770034 | None:intergenic | 35.0% | |
AAGCGATGTTTAGATACACA+AGG | + | chr8.3:15771126-15771145 | None:intergenic | 35.0% | |
AATAGTGTTACGGACATCAT+AGG | + | chr8.3:15769574-15769593 | None:intergenic | 35.0% | |
ACATTAGTGTCATCAAACAG+AGG | + | chr8.3:15770359-15770378 | None:intergenic | 35.0% | |
ACTTGAACCATTTGGACATA+TGG | - | chr8.3:15769466-15769485 | MS.gene58419:intron | 35.0% | |
AGACCAACATGGCTTATTAA+TGG | - | chr8.3:15770871-15770890 | MS.gene58419:CDS | 35.0% | |
ATCCTTGATCACTGTTTGAT+TGG | - | chr8.3:15769210-15769229 | MS.gene58419:intron | 35.0% | |
ATTCAACCAAATGTTGGTCA+AGG | - | chr8.3:15769519-15769538 | MS.gene58419:intron | 35.0% | |
ATTTGGTTGAATGCAACCAA+AGG | + | chr8.3:15769511-15769530 | None:intergenic | 35.0% | |
CATAAGCACCATTACTAACT+CGG | + | chr8.3:15769665-15769684 | None:intergenic | 35.0% | |
CCAACCATGATCTTATTATG+AGG | - | chr8.3:15771217-15771236 | MS.gene58419:CDS | 35.0% | |
CCTCATAATAAGATCATGGT+TGG | + | chr8.3:15771220-15771239 | None:intergenic | 35.0% | |
CTGAATCAATAACAGCTTGA+CGG | + | chr8.3:15770900-15770919 | None:intergenic | 35.0% | |
CTTGAACCATTTGGACATAT+GGG | - | chr8.3:15769467-15769486 | MS.gene58419:intron | 35.0% | |
GAGTTACCTATAGAAGAAGA+AGG | + | chr8.3:15770095-15770114 | None:intergenic | 35.0% | |
GGGGCAACATTAACATAAAT+AGG | + | chr8.3:15771093-15771112 | None:intergenic | 35.0% | |
GGTTATTATGGCTATCCTAA+TGG | - | chr8.3:15770724-15770743 | MS.gene58419:CDS | 35.0% | |
GTAACAAGTTCCTTAAAACC+TGG | + | chr8.3:15771177-15771196 | None:intergenic | 35.0% | |
GTGCTCTTGCAAATAATATG+TGG | - | chr8.3:15771007-15771026 | MS.gene58419:CDS | 35.0% | |
GTGTATCTAAACATCGCTTT+AGG | - | chr8.3:15771127-15771146 | MS.gene58419:CDS | 35.0% | |
GTTCCGCTGCTAATAATAAA+TGG | - | chr8.3:15769844-15769863 | MS.gene58419:intron | 35.0% | |
TAAACGGATAACCAACAGTT+GGG | + | chr8.3:15770936-15770955 | None:intergenic | 35.0% | |
TATTATGGCTATCCTAATGG+AGG | - | chr8.3:15770727-15770746 | MS.gene58419:CDS | 35.0% | |
TCTTGATGCTAGCGAAAAAA+GGG | - | chr8.3:15770837-15770856 | MS.gene58419:CDS | 35.0% | |
TTAAGATCAGGAATTGTGCT+CGG | + | chr8.3:15770457-15770476 | None:intergenic | 35.0% | |
TTCTTGATGCTAGCGAAAAA+AGG | - | chr8.3:15770836-15770855 | MS.gene58419:CDS | 35.0% | |
TTTGGTTGAATGCAACCAAA+GGG | + | chr8.3:15769510-15769529 | None:intergenic | 35.0% | |
! | ACGGTCTAATTTTTCTTCGA+CGG | + | chr8.3:15770989-15771008 | None:intergenic | 35.0% |
! | ATTTCATCATTTGCTGCTGA+TGG | - | chr8.3:15770260-15770279 | MS.gene58419:CDS | 35.0% |
! | GCTTTAGGTATGAAAATGCA+TGG | - | chr8.3:15771142-15771161 | MS.gene58419:CDS | 35.0% |
! | GTATCTTGAACCAGGTTTTA+AGG | - | chr8.3:15771164-15771183 | MS.gene58419:CDS | 35.0% |
! | TTTCATCATTTGCTGCTGAT+GGG | - | chr8.3:15770261-15770280 | MS.gene58419:CDS | 35.0% |
!! | AGGAACAAATGTTAGTCTTG+GGG | - | chr8.3:15770304-15770323 | MS.gene58419:CDS | 35.0% |
!! | TCAGAGTTGGTAATTGGAAA+CGG | + | chr8.3:15770170-15770189 | None:intergenic | 35.0% |
!! | TTGATAGTGTTCTTGGTGTA+TGG | - | chr8.3:15770692-15770711 | MS.gene58419:CDS | 35.0% |
!!! | CCATTCTTTTTTCAAAGGAG+CGG | + | chr8.3:15769637-15769656 | None:intergenic | 35.0% |
!!! | GAAGAACTTCGTTTTTTGCT+TGG | - | chr8.3:15770547-15770566 | MS.gene58419:CDS | 35.0% |
AACAGTGTCAAAGCGAAACA+TGG | - | chr8.3:15770041-15770060 | MS.gene58419:intron | 40.0% | |
AAGGAGCGGTGACATTAATA+CGG | + | chr8.3:15769623-15769642 | None:intergenic | 40.0% | |
AATGCATGGTATCTTGAACC+AGG | - | chr8.3:15771156-15771175 | MS.gene58419:CDS | 40.0% | |
ACACACTGACAAAGTTTGTC+CGG | - | chr8.3:15769746-15769765 | MS.gene58419:intron | 40.0% | |
ATAGGATAGTGATCAGAAGC+AGG | + | chr8.3:15771075-15771094 | None:intergenic | 40.0% | |
CAAACAGTGATCAAGGATAG+TGG | + | chr8.3:15769208-15769227 | None:intergenic | 40.0% | |
CAACAAGAAGGTCATGTTTG+AGG | + | chr8.3:15770016-15770035 | None:intergenic | 40.0% | |
CTGAACTGAAGAAGAGAAAG+AGG | - | chr8.3:15770213-15770232 | MS.gene58419:CDS | 40.0% | |
CTGATCTTAAGTACCTAGTC+CGG | - | chr8.3:15770467-15770486 | MS.gene58419:CDS | 40.0% | |
CTTGATGCTAGCGAAAAAAG+GGG | - | chr8.3:15770838-15770857 | MS.gene58419:CDS | 40.0% | |
GAAATCTCCGAAAATACACC+AGG | + | chr8.3:15770809-15770828 | None:intergenic | 40.0% | |
GATGACACTAATGTAATGGC+AGG | - | chr8.3:15770365-15770384 | MS.gene58419:CDS | 40.0% | |
GATTGTCAACAGCAAGCATA+CGG | + | chr8.3:15769983-15770002 | None:intergenic | 40.0% | |
GGTGAGGGAAACTTTGTAAT+AGG | - | chr8.3:15770284-15770303 | MS.gene58419:CDS | 40.0% | |
GGTTGCATTCAACCAAATGT+TGG | - | chr8.3:15769513-15769532 | MS.gene58419:intron | 40.0% | |
GTAAACGGATAACCAACAGT+TGG | + | chr8.3:15770937-15770956 | None:intergenic | 40.0% | |
GTTTCCAATTACCAACTCTG+AGG | - | chr8.3:15770169-15770188 | MS.gene58419:CDS | 40.0% | |
TAAGATCAGGAATTGTGCTC+GGG | + | chr8.3:15770456-15770475 | None:intergenic | 40.0% | |
TATTAGCAGCGGAACCAATA+CGG | + | chr8.3:15769839-15769858 | None:intergenic | 40.0% | |
TCAGCTTCAAACTTACTTGC+TGG | - | chr8.3:15770113-15770132 | MS.gene58419:intron | 40.0% | |
TGGAAAGTCCGAGTTAGTAA+TGG | - | chr8.3:15769654-15769673 | MS.gene58419:intron | 40.0% | |
TGGAAATTATCGTACAGCCA+CGG | + | chr8.3:15769399-15769418 | None:intergenic | 40.0% | |
TTGATGCTAGCGAAAAAAGG+GGG | - | chr8.3:15770839-15770858 | MS.gene58419:CDS | 40.0% | |
TTGTCGAAGGAAATTCCAAG+CGG | + | chr8.3:15770764-15770783 | None:intergenic | 40.0% | |
! | AATAAGCCATGTTGGTCTAG+TGG | + | chr8.3:15770869-15770888 | None:intergenic | 40.0% |
! | AATTTTTCTTCGACGGCACT+TGG | + | chr8.3:15770982-15771001 | None:intergenic | 40.0% |
! | CCGCTCCTTTGAAAAAAGAA+TGG | - | chr8.3:15769634-15769653 | MS.gene58419:intron | 40.0% |
! | CTGTTGGTTATCCGTTTACT+TGG | - | chr8.3:15770938-15770957 | MS.gene58419:CDS | 40.0% |
! | TGGAGACTTACCGGTTATTA+TGG | - | chr8.3:15770712-15770731 | MS.gene58419:CDS | 40.0% |
! | TTCATCATTTGCTGCTGATG+GGG | - | chr8.3:15770262-15770281 | MS.gene58419:CDS | 40.0% |
!! | AACAAATGTTAGTCTTGGGG+GGG | - | chr8.3:15770307-15770326 | MS.gene58419:CDS | 40.0% |
!! | AGGAACTTGTTACTAACTCG+TGG | - | chr8.3:15771184-15771203 | MS.gene58419:CDS | 40.0% |
!! | CGTCAAGCTGTTATTGATTC+AGG | - | chr8.3:15770898-15770917 | MS.gene58419:CDS | 40.0% |
!! | GAACAAATGTTAGTCTTGGG+GGG | - | chr8.3:15770306-15770325 | MS.gene58419:CDS | 40.0% |
!! | GATAGTGGATGTTTCAGACT+CGG | + | chr8.3:15769193-15769212 | None:intergenic | 40.0% |
!! | GGAACAAATGTTAGTCTTGG+GGG | - | chr8.3:15770305-15770324 | MS.gene58419:CDS | 40.0% |
!! | TTCTGTCGACTTGAACCATT+TGG | - | chr8.3:15769458-15769477 | MS.gene58419:intron | 40.0% |
!!! | GGAGTTTTTTGTTTCAGGTG+TGG | - | chr8.3:15769714-15769733 | MS.gene58419:intron | 40.0% |
AATAGGCAGCCTGAATCTCA+CGG | + | chr8.3:15769251-15769270 | None:intergenic | 45.0% | |
ACGGACTTTCAGACGCATAT+AGG | + | chr8.3:15769604-15769623 | None:intergenic | 45.0% | |
AGATATCCGGATTGAAGTGC+CGG | + | chr8.3:15770489-15770508 | None:intergenic | 45.0% | |
AGCCATACGCTCACTGAAAT+AGG | + | chr8.3:15769268-15769287 | None:intergenic | 45.0% | |
ATCTTGAGACTCCTCAGAGT+TGG | + | chr8.3:15770183-15770202 | None:intergenic | 45.0% | |
ATGGTTCAAGTCGACAGAAG+TGG | + | chr8.3:15769457-15769476 | None:intergenic | 45.0% | |
ATTAGCAGCGGAACCAATAC+GGG | + | chr8.3:15769838-15769857 | None:intergenic | 45.0% | |
CAAGTGTATCTGACAAGCAC+CGG | + | chr8.3:15770069-15770088 | None:intergenic | 45.0% | |
CCAAATGTTGGTCAAGGCAT+AGG | - | chr8.3:15769525-15769544 | MS.gene58419:intron | 45.0% | |
CCTATGCCTTGACCAACATT+TGG | + | chr8.3:15769528-15769547 | None:intergenic | 45.0% | |
CTAACCAATTTACAGGTCCC+TGG | - | chr8.3:15770788-15770807 | MS.gene58419:CDS | 45.0% | |
CTAGACTCATTTACCTAGGC+AGG | + | chr8.3:15770405-15770424 | None:intergenic | 45.0% | |
GAAGAAGAGAAAGAGGATGC+TGG | - | chr8.3:15770220-15770239 | MS.gene58419:CDS | 45.0% | |
GCCACTAGACTCATTTACCT+AGG | + | chr8.3:15770409-15770428 | None:intergenic | 45.0% | |
GCCTAGGTAAATGAGTCTAG+TGG | - | chr8.3:15770405-15770424 | MS.gene58419:CDS | 45.0% | |
GGATACGGTCCATTACGATA+TGG | + | chr8.3:15769419-15769438 | None:intergenic | 45.0% | |
GGCCAATCAAACAGTGATCA+AGG | + | chr8.3:15769215-15769234 | None:intergenic | 45.0% | |
GGTAAATGAGTCTAGTGGCA+TGG | - | chr8.3:15770410-15770429 | MS.gene58419:CDS | 45.0% | |
GGTTAAACCCTCTTCAGCAA+GGG | + | chr8.3:15769157-15769176 | None:intergenic | 45.0% | |
GTAATTGGAAACGGTTCAGC+AGG | + | chr8.3:15770161-15770180 | None:intergenic | 45.0% | |
GTCTAGTGGCATGGAATTGT+CGG | - | chr8.3:15770419-15770438 | MS.gene58419:CDS | 45.0% | |
TACACCAGGGACCTGTAAAT+TGG | + | chr8.3:15770795-15770814 | None:intergenic | 45.0% | |
TCTAGTGGCATGGAATTGTC+GGG | - | chr8.3:15770420-15770439 | MS.gene58419:CDS | 45.0% | |
TGCCTATTTCAGTGAGCGTA+TGG | - | chr8.3:15769263-15769282 | MS.gene58419:intron | 45.0% | |
TGGTTCAAGTCGACAGAAGT+GGG | + | chr8.3:15769456-15769475 | None:intergenic | 45.0% | |
TGTTTAGATACACAAGGCCG+TGG | + | chr8.3:15771120-15771139 | None:intergenic | 45.0% | |
TTGTCTGATGTCCCAACTGT+TGG | - | chr8.3:15770922-15770941 | MS.gene58419:CDS | 45.0% | |
! | ACAGGTCCCTGGTGTATTTT+CGG | - | chr8.3:15770799-15770818 | MS.gene58419:CDS | 45.0% |
! | ACTTGTTACTAACTCGTGGC+AGG | - | chr8.3:15771188-15771207 | MS.gene58419:CDS | 45.0% |
! | CACTGTTTTGCGCAACAAGA+AGG | + | chr8.3:15770028-15770047 | None:intergenic | 45.0% |
! | CGGACTAGGTACTTAAGATC+AGG | + | chr8.3:15770469-15770488 | None:intergenic | 45.0% |
! | CTTGGTGTATGGAGACTTAC+CGG | - | chr8.3:15770703-15770722 | MS.gene58419:CDS | 45.0% |
! | TCATCATTTGCTGCTGATGG+GGG | - | chr8.3:15770263-15770282 | MS.gene58419:CDS | 45.0% |
!! | GACTCCTCAGAGTTGGTAAT+TGG | + | chr8.3:15770176-15770195 | None:intergenic | 45.0% |
!! | TGATGATGGTGTCCGCAATT+GGG | - | chr8.3:15769788-15769807 | MS.gene58419:intron | 45.0% |
!! | TGTTTCAGGTGTGGTTTGCT+TGG | - | chr8.3:15769723-15769742 | MS.gene58419:intron | 45.0% |
AAGCCTAATCCTGCCCGTAT+TGG | - | chr8.3:15769822-15769841 | MS.gene58419:intron | 50.0% | |
AATGGCAGGTCCTGATGATC+AGG | - | chr8.3:15770379-15770398 | MS.gene58419:CDS | 50.0% | |
ACGGACCGTCATCAAGAATG+CGG | + | chr8.3:15769380-15769399 | None:intergenic | 50.0% | |
AGACACCAGCAGGAACATAG+TGG | + | chr8.3:15769902-15769921 | None:intergenic | 50.0% | |
AGTGGATGTTTCAGACTCGG+TGG | + | chr8.3:15769190-15769209 | None:intergenic | 50.0% | |
CAAGGCATAGGCAGCTTTCT+AGG | - | chr8.3:15769537-15769556 | MS.gene58419:intron | 50.0% | |
CACCACTAGGAGGAGAGTTT+CGG | + | chr8.3:15769935-15769954 | None:intergenic | 50.0% | |
CAGCGATATTGAGGTGGGAA+GGG | + | chr8.3:15769128-15769147 | None:intergenic | 50.0% | |
CAGGATTAGGCTTCAGGTCA+GGG | + | chr8.3:15769815-15769834 | None:intergenic | 50.0% | |
CAGGTAGTCCAAGCACCAAA+GGG | + | chr8.3:15770142-15770161 | None:intergenic | 50.0% | |
CCATTTGGACATATGGGTCC+AGG | - | chr8.3:15769473-15769492 | MS.gene58419:intron | 50.0% | |
CCTGGACCCATATGTCCAAA+TGG | + | chr8.3:15769476-15769495 | None:intergenic | 50.0% | |
CTAGTGGCATGGAATTGTCG+GGG | - | chr8.3:15770421-15770440 | MS.gene58419:CDS | 50.0% | |
CTTAGCTGACCGTGAGATTC+AGG | - | chr8.3:15769239-15769258 | MS.gene58419:intron | 50.0% | |
GAACCAATACGGGCAGGATT+AGG | + | chr8.3:15769828-15769847 | None:intergenic | 50.0% | |
GACATATGGGTCCAGGTTCA+CGG | - | chr8.3:15769480-15769499 | MS.gene58419:intron | 50.0% | |
GAGGAGTCTCAAGATGCTAC+TGG | - | chr8.3:15770188-15770207 | MS.gene58419:CDS | 50.0% | |
GCATGGAATTGTCGGGGTAT+AGG | - | chr8.3:15770427-15770446 | MS.gene58419:CDS | 50.0% | |
GCTGTTCTACGACCTCCATT+AGG | + | chr8.3:15770742-15770761 | None:intergenic | 50.0% | |
GGGTTAAACCCTCTTCAGCA+AGG | + | chr8.3:15769158-15769177 | None:intergenic | 50.0% | |
GGTGAGCTAGAGTCTCACTT+AGG | + | chr8.3:15770516-15770535 | None:intergenic | 50.0% | |
GGTTCAAGTCGACAGAAGTG+GGG | + | chr8.3:15769455-15769474 | None:intergenic | 50.0% | |
GTCAAAGCGAAACATGGCTC+CGG | - | chr8.3:15770047-15770066 | MS.gene58419:intron | 50.0% | |
TCGGCACAGCAGTAGGAATT+GGG | + | chr8.3:15769878-15769897 | None:intergenic | 50.0% | |
TCTCACGGTCAGCTAAGACA+CGG | + | chr8.3:15769236-15769255 | None:intergenic | 50.0% | |
TTAATGTTGCCCCCACACCA+CGG | - | chr8.3:15771100-15771119 | MS.gene58419:CDS | 50.0% | |
TTCGAGCTGGAGTCTGATGA+TGG | - | chr8.3:15769774-15769793 | MS.gene58419:intron | 50.0% | |
! | GATGATGGTGTCCGCAATTG+GGG | - | chr8.3:15769789-15769808 | MS.gene58419:intron | 50.0% |
! | TGTTTTCCTGTAGACCGCAC+CGG | - | chr8.3:15770580-15770599 | MS.gene58419:CDS | 50.0% |
!! | ACAGCATTGACAGCACCACT+AGG | + | chr8.3:15769948-15769967 | None:intergenic | 50.0% |
!! | AGACTCGGTGGCTAGGTTAA+GGG | + | chr8.3:15769178-15769197 | None:intergenic | 50.0% |
!! | ATGTTTCAGACTCGGTGGCT+AGG | + | chr8.3:15769185-15769204 | None:intergenic | 50.0% |
!! | CTGATGATGGTGTCCGCAAT+TGG | - | chr8.3:15769787-15769806 | MS.gene58419:intron | 50.0% |
!!! | GCGGGGGTCTAGCTTTATTT+TGG | - | chr8.3:15770608-15770627 | MS.gene58419:CDS | 50.0% |
AACCCTCTTCAGCAAGGGTG+AGG | + | chr8.3:15769152-15769171 | None:intergenic | 55.0% | |
ACAGAAGTGGGGACAACACC+AGG | + | chr8.3:15769444-15769463 | None:intergenic | 55.0% | |
ACGATCGAAACACGCTTGCC+TGG | + | chr8.3:15769303-15769322 | None:intergenic | 55.0% | |
AGATACACAAGGCCGTGGTG+TGG | + | chr8.3:15771115-15771134 | None:intergenic | 55.0% | |
AGGATGCTGGCCCTTCAGAA+TGG | - | chr8.3:15770233-15770252 | MS.gene58419:CDS | 55.0% | |
ATACACAAGGCCGTGGTGTG+GGG | + | chr8.3:15771113-15771132 | None:intergenic | 55.0% | |
CAAAGGGAAGACCGTGAACC+TGG | + | chr8.3:15769494-15769513 | None:intergenic | 55.0% | |
CAGGTTCACGGTCTTCCCTT+TGG | - | chr8.3:15769492-15769511 | MS.gene58419:intron | 55.0% | |
CCAGCAGGAACATAGTGGCT+CGG | + | chr8.3:15769897-15769916 | None:intergenic | 55.0% | |
CCAGCATGAAAGACACCAGC+AGG | + | chr8.3:15769912-15769931 | None:intergenic | 55.0% | |
CCAGCGATATTGAGGTGGGA+AGG | + | chr8.3:15769129-15769148 | None:intergenic | 55.0% | |
CCTAGTCCGGCACTTCAATC+CGG | - | chr8.3:15770480-15770499 | MS.gene58419:CDS | 55.0% | |
CCTGCTGGTGTCTTTCATGC+TGG | - | chr8.3:15769909-15769928 | MS.gene58419:intron | 55.0% | |
CCTTCCCACCTCAATATCGC+TGG | - | chr8.3:15769126-15769145 | MS.gene58419:CDS | 55.0% | |
CGGACCGTCATCAAGAATGC+GGG | + | chr8.3:15769379-15769398 | None:intergenic | 55.0% | |
CTCGGCACAGCAGTAGGAAT+TGG | + | chr8.3:15769879-15769898 | None:intergenic | 55.0% | |
GACTCCAGCTCGAACAACTC+CGG | + | chr8.3:15769768-15769787 | None:intergenic | 55.0% | |
GAGGCCAGCGATATTGAGGT+GGG | + | chr8.3:15769133-15769152 | None:intergenic | 55.0% | |
GATACACAAGGCCGTGGTGT+GGG | + | chr8.3:15771114-15771133 | None:intergenic | 55.0% | |
GCAGGATTAGGCTTCAGGTC+AGG | + | chr8.3:15769816-15769835 | None:intergenic | 55.0% | |
GCAGGTAGTCCAAGCACCAA+AGG | + | chr8.3:15770143-15770162 | None:intergenic | 55.0% | |
GCGCAGACGACATGTCAGTT+TGG | - | chr8.3:15771250-15771269 | MS.gene58419:CDS | 55.0% | |
GCTGCCCGCATTCTTGATGA+CGG | - | chr8.3:15769372-15769391 | MS.gene58419:intron | 55.0% | |
GGACAACACCAGGCTGGATA+CGG | + | chr8.3:15769434-15769453 | None:intergenic | 55.0% | |
GGCGTACCACTAGACCAACA+TGG | - | chr8.3:15770860-15770879 | MS.gene58419:CDS | 55.0% | |
GTAGTCCAAGCACCAAAGGG+CGG | + | chr8.3:15770139-15770158 | None:intergenic | 55.0% | |
TACGGGCAGGATTAGGCTTC+AGG | + | chr8.3:15769821-15769840 | None:intergenic | 55.0% | |
TGAGGCCAGCGATATTGAGG+TGG | + | chr8.3:15769134-15769153 | None:intergenic | 55.0% | |
TTGTCCGGAGTTGTTCGAGC+TGG | - | chr8.3:15769761-15769780 | MS.gene58419:intron | 55.0% | |
TTTGCTGCTGATGGGGGTGA+GGG | - | chr8.3:15770269-15770288 | MS.gene58419:CDS | 55.0% | |
! | ATTTGCTGCTGATGGGGGTG+AGG | - | chr8.3:15770268-15770287 | MS.gene58419:CDS | 55.0% |
! | GCATTGACAGCACCACTAGG+AGG | + | chr8.3:15769945-15769964 | None:intergenic | 55.0% |
! | TGCGGGCAGCATCCATTTTG+TGG | + | chr8.3:15769362-15769381 | None:intergenic | 55.0% |
!! | CAGACTCGGTGGCTAGGTTA+AGG | + | chr8.3:15769179-15769198 | None:intergenic | 55.0% |
!! | GCATTCTTGATGACGGTCCG+TGG | - | chr8.3:15769379-15769398 | MS.gene58419:intron | 55.0% |
!! | GTAATGGACCGTATCCAGCC+TGG | - | chr8.3:15769423-15769442 | MS.gene58419:intron | 55.0% |
AAGTGGGGACAACACCAGGC+TGG | + | chr8.3:15769440-15769459 | None:intergenic | 60.0% | |
ATGGCTCGTGCTTGGAAGCC+AGG | - | chr8.3:15769282-15769301 | MS.gene58419:CDS | 60.0% | |
CCGAGCCACTATGTTCCTGC+TGG | - | chr8.3:15769894-15769913 | MS.gene58419:intron | 60.0% | |
CCTAGGCAGGCCTGATCATC+AGG | + | chr8.3:15770392-15770411 | None:intergenic | 60.0% | |
CCTGATGATCAGGCCTGCCT+AGG | - | chr8.3:15770389-15770408 | MS.gene58419:CDS | 60.0% | |
GAGGTCGTAGAACAGCCGCT+TGG | - | chr8.3:15770746-15770765 | MS.gene58419:CDS | 60.0% | |
GGCCGAAACTCTCCTCCTAG+TGG | - | chr8.3:15769930-15769949 | MS.gene58419:intron | 60.0% | |
GGCCTCACCCTTGCTGAAGA+GGG | - | chr8.3:15769147-15769166 | MS.gene58419:CDS | 60.0% | |
GGGTGAGGCCAGCGATATTG+AGG | + | chr8.3:15769137-15769156 | None:intergenic | 60.0% | |
GTGAGCGTATGGCTCGTGCT+TGG | - | chr8.3:15769274-15769293 | MS.gene58419:intron | 60.0% | |
TACACAAGGCCGTGGTGTGG+GGG | + | chr8.3:15771112-15771131 | None:intergenic | 60.0% | |
TCAGGTCAGGGCCCCAATTG+CGG | + | chr8.3:15769803-15769822 | None:intergenic | 60.0% | |
TGGCCTCACCCTTGCTGAAG+AGG | - | chr8.3:15769146-15769165 | MS.gene58419:CDS | 60.0% | |
! | CTTACTTGCTGGCCGCCCTT+TGG | - | chr8.3:15770124-15770143 | MS.gene58419:intron | 60.0% |
! | TAGTGGCTCGGCACAGCAGT+AGG | + | chr8.3:15769885-15769904 | None:intergenic | 60.0% |
!! | CCGGATTGAAGTGCCGGACT+AGG | + | chr8.3:15770483-15770502 | None:intergenic | 60.0% |
AGCTAGACCCCCGCCTCTAC+CGG | + | chr8.3:15770602-15770621 | None:intergenic | 65.0% | |
CCTCTACCGGTGCGGTCTAC+AGG | + | chr8.3:15770589-15770608 | None:intergenic | 65.0% | |
GCAGCGGAACCAATACGGGC+AGG | + | chr8.3:15769834-15769853 | None:intergenic | 65.0% | |
! | CCTGTAGACCGCACCGGTAG+AGG | - | chr8.3:15770586-15770605 | MS.gene58419:CDS | 65.0% |
! | GTAGACCGCACCGGTAGAGG+CGG | - | chr8.3:15770589-15770608 | MS.gene58419:CDS | 65.0% |
! | TAGACCGCACCGGTAGAGGC+GGG | - | chr8.3:15770590-15770609 | MS.gene58419:CDS | 65.0% |
! | AGACCGCACCGGTAGAGGCG+GGG | - | chr8.3:15770591-15770610 | MS.gene58419:CDS | 70.0% |
!! | GCTGGCCGCCCTTTGGTGCT+TGG | - | chr8.3:15770131-15770150 | MS.gene58419:intron | 70.0% |
GACCCCCGCCTCTACCGGTG+CGG | + | chr8.3:15770597-15770616 | None:intergenic | 75.0% | |
! | GACCGCACCGGTAGAGGCGG+GGG | - | chr8.3:15770592-15770611 | MS.gene58419:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 15769120 | 15771304 | 15769120 | ID=MS.gene58419 |
chr8.3 | mRNA | 15769120 | 15771304 | 15769120 | ID=MS.gene58419.t1;Parent=MS.gene58419 |
chr8.3 | exon | 15770140 | 15771304 | 15770140 | ID=MS.gene58419.t1.exon1;Parent=MS.gene58419.t1 |
chr8.3 | CDS | 15770140 | 15771304 | 15770140 | ID=cds.MS.gene58419.t1;Parent=MS.gene58419.t1 |
chr8.3 | exon | 15769276 | 15769357 | 15769276 | ID=MS.gene58419.t1.exon2;Parent=MS.gene58419.t1 |
chr8.3 | CDS | 15769276 | 15769357 | 15769276 | ID=cds.MS.gene58419.t1;Parent=MS.gene58419.t1 |
chr8.3 | exon | 15769120 | 15769168 | 15769120 | ID=MS.gene58419.t1.exon3;Parent=MS.gene58419.t1 |
chr8.3 | CDS | 15769120 | 15769168 | 15769120 | ID=cds.MS.gene58419.t1;Parent=MS.gene58419.t1 |
Gene Sequence |
Protein sequence |