Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028716.t1 | AES70414.1 | 52.6 | 346 | 97 | 4 | 1 | 345 | 1 | 280 | 1.20E-87 | 334 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028716.t1 | O04244 | 26.3 | 137 | 95 | 3 | 83 | 216 | 6 | 139 | 1.6e-08 | 62.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028716.t1 | G7J017 | 52.6 | 346 | 97 | 4 | 1 | 345 | 1 | 280 | 8.7e-88 | 334.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028716.t1 | MTR_3g053920 | 52.601 | 346 | 97 | 4 | 1 | 345 | 1 | 280 | 7.25e-110 | 327 |
MS.gene028716.t1 | MTR_2g061500 | 74.419 | 129 | 33 | 0 | 1 | 129 | 1 | 129 | 8.28e-66 | 209 |
MS.gene028716.t1 | MTR_4g103530 | 76.289 | 97 | 23 | 0 | 55 | 151 | 1 | 97 | 2.40e-48 | 165 |
MS.gene028716.t1 | MTR_7g011710 | 77.647 | 85 | 19 | 0 | 55 | 139 | 1 | 85 | 1.19e-41 | 146 |
MS.gene028716.t1 | MTR_6g033215 | 36.041 | 197 | 119 | 3 | 5 | 199 | 103 | 294 | 1.87e-36 | 137 |
MS.gene028716.t1 | MTR_8g463110 | 70.370 | 81 | 24 | 0 | 407 | 487 | 244 | 324 | 2.40e-32 | 131 |
MS.gene028716.t1 | MTR_8g463110 | 56.198 | 121 | 44 | 3 | 289 | 407 | 1 | 114 | 1.84e-22 | 101 |
MS.gene028716.t1 | MTR_0010s0370 | 36.571 | 175 | 105 | 5 | 8 | 177 | 4 | 177 | 4.66e-30 | 116 |
MS.gene028716.t1 | MTR_0010s0350 | 36.571 | 175 | 105 | 5 | 8 | 177 | 4 | 177 | 4.66e-30 | 116 |
MS.gene028716.t1 | MTR_4g020630 | 57.895 | 76 | 32 | 0 | 412 | 487 | 185 | 260 | 6.19e-22 | 99.0 |
MS.gene028716.t1 | MTR_7g063500 | 43.158 | 95 | 53 | 1 | 394 | 487 | 8 | 102 | 1.65e-19 | 84.7 |
MS.gene028716.t1 | MTR_6g034215 | 58.333 | 72 | 30 | 0 | 412 | 483 | 253 | 324 | 3.33e-19 | 89.0 |
MS.gene028716.t1 | MTR_7g056813 | 58.462 | 65 | 25 | 1 | 423 | 487 | 8 | 70 | 3.53e-16 | 80.5 |
MS.gene028716.t1 | MTR_3g044860 | 53.571 | 56 | 26 | 0 | 423 | 478 | 126 | 181 | 2.27e-13 | 71.2 |
MS.gene028716.t1 | MTR_1g036720 | 32.692 | 104 | 68 | 1 | 11 | 112 | 7 | 110 | 2.63e-13 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028716.t1 | AT2G17920 | 27.027 | 185 | 127 | 4 | 36 | 216 | 39 | 219 | 4.40e-17 | 82.4 |
MS.gene028716.t1 | AT2G41590 | 26.344 | 186 | 129 | 3 | 35 | 216 | 38 | 219 | 8.19e-16 | 79.3 |
MS.gene028716.t1 | AT5G36228 | 25.888 | 197 | 139 | 3 | 36 | 227 | 39 | 233 | 1.34e-15 | 78.6 |
MS.gene028716.t1 | AT3G57587 | 25.137 | 183 | 133 | 2 | 36 | 216 | 39 | 219 | 1.49e-14 | 75.5 |
MS.gene028716.t1 | AT3G31430 | 27.568 | 185 | 122 | 5 | 36 | 215 | 134 | 311 | 2.48e-14 | 74.7 |
MS.gene028716.t1 | AT2G02103 | 25.946 | 185 | 129 | 3 | 36 | 216 | 39 | 219 | 4.14e-14 | 74.3 |
MS.gene028716.t1 | AT5G18636 | 25.405 | 185 | 130 | 3 | 36 | 216 | 39 | 219 | 4.26e-14 | 74.3 |
MS.gene028716.t1 | AT5G25200 | 25.405 | 185 | 130 | 3 | 36 | 216 | 39 | 219 | 4.30e-14 | 74.3 |
MS.gene028716.t1 | AT2G13450 | 26.486 | 185 | 126 | 5 | 36 | 215 | 39 | 218 | 1.52e-13 | 72.8 |
MS.gene028716.t1 | AT3G47920 | 25.676 | 148 | 106 | 2 | 71 | 216 | 3 | 148 | 1.58e-12 | 68.6 |
Find 141 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTTGATGCTGCTCGCATTT+TGG | 0.160961 | 2.1:+8887251 | MS.gene028716:CDS |
CAACATTGATGGTCTCATTT+TGG | 0.181790 | 2.1:+8887023 | MS.gene028716:CDS |
CCGATGACGGTGTGCGCAAC+TGG | 0.182509 | 2.1:+8887673 | MS.gene028716:CDS |
CTCTGAATCATCTGGACATT+TGG | 0.208576 | 2.1:+8887352 | MS.gene028716:CDS |
CAAGGAATTGGAAGCTTTCT+TGG | 0.235486 | 2.1:+8887423 | MS.gene028716:CDS |
GTATGTTTGAATTGCGAAAA+AGG | 0.248851 | 2.1:+8889280 | MS.gene028716:CDS |
TGTTACAGGTGTGGCATTCT+TGG | 0.257369 | 2.1:+8887609 | MS.gene028716:CDS |
AAACAAGGTGTGACGGGTTC+TGG | 0.272681 | 2.1:+8887942 | MS.gene028716:CDS |
TTCCTGCCTTCCCCATCTTC+TGG | 0.278072 | 2.1:+8887978 | MS.gene028716:CDS |
GTGCAGATTGGAACACATTT+TGG | 0.280181 | 2.1:-8887785 | None:intergenic |
CTGTTTGATTGGCCGCGTTT+TGG | 0.292559 | 2.1:+8887107 | MS.gene028716:CDS |
TATGTCAAGATGATGCTTAT+TGG | 0.298442 | 2.1:+8889316 | MS.gene028716:CDS |
TTTGTTTAAATATGAGAAAT+TGG | 0.299208 | 2.1:+8887578 | MS.gene028716:CDS |
CTTTGCTGCTGATGGGACTT+TGG | 0.300322 | 2.1:+8888178 | MS.gene028716:CDS |
TTTGCTGCTGATGGGACTTT+GGG | 0.306368 | 2.1:+8888179 | MS.gene028716:CDS |
TGTCACTGCGCCTTTGAAAA+AGG | 0.312303 | 2.1:+8887515 | MS.gene028716:CDS |
AACACTGCTGCTGTTCCTGC+TGG | 0.313186 | 2.1:+8887822 | MS.gene028716:CDS |
CCAATTCCTTGACCAACCTT+TGG | 0.317754 | 2.1:-8887411 | None:intergenic |
ACTTCTGCCTTTGCTGCTGA+TGG | 0.322065 | 2.1:+8888170 | MS.gene028716:CDS |
CAGGTCCATGGTTTGCCTTT+CGG | 0.331162 | 2.1:+8887378 | MS.gene028716:CDS |
CCAAAGGTTGGTCAAGGAAT+TGG | 0.333096 | 2.1:+8887411 | MS.gene028716:CDS |
TCTGAATCATCTGGACATTT+GGG | 0.336625 | 2.1:+8887353 | MS.gene028716:CDS |
CGGTATCAGCAGCTAGGTTA+AGG | 0.343397 | 2.1:-8887062 | None:intergenic |
CATCAAGTTTGTGATGGAAT+TGG | 0.349530 | 2.1:-8887236 | None:intergenic |
GCAGCAGTGTTGCGGCCAGC+AGG | 0.356952 | 2.1:-8887810 | None:intergenic |
TGCTCTTCTTGCTATTAAAC+AGG | 0.365904 | 2.1:+8887887 | MS.gene028716:CDS |
CTCGGCCTCTAACATGCTGC+AGG | 0.375278 | 2.1:+8888004 | MS.gene028716:CDS |
CAGGGGCGTTCACTGGTGCT+TGG | 0.385485 | 2.1:+8888023 | MS.gene028716:CDS |
ATCCTTGAACACTGTTTGAT+TGG | 0.388429 | 2.1:+8887096 | MS.gene028716:CDS |
AAGCCTGTTTCAATGCGTAT+AGG | 0.388670 | 2.1:+8887708 | MS.gene028716:CDS |
CTCGGCAAAGCATCAGGTAT+AGG | 0.390834 | 2.1:-8887762 | None:intergenic |
ACGCCCCTGCAGCATGTTAG+AGG | 0.394577 | 2.1:-8888009 | None:intergenic |
ACTTTGGGAAATGATGTAAT+AGG | 0.395176 | 2.1:+8888194 | MS.gene028716:CDS |
CGATGACGGTGTGCGCAACT+GGG | 0.395807 | 2.1:+8887674 | MS.gene028716:CDS |
GCAATTCAAACATACGAATC+TGG | 0.401253 | 2.1:-8889272 | None:intergenic |
TTTGCCTGGTTTCCATGCTC+TGG | 0.404372 | 2.1:-8887172 | None:intergenic |
TGATTCAGAGGGACAGTGAC+TGG | 0.415215 | 2.1:-8887339 | None:intergenic |
CACTGTCCCTCTGAATCATC+TGG | 0.418295 | 2.1:+8887344 | MS.gene028716:CDS |
TGCTGCTCAAACAGCGGTGC+AGG | 0.418746 | 2.1:+8887917 | MS.gene028716:CDS |
GACATTTGGGTGCAGGTCCA+TGG | 0.425964 | 2.1:+8887366 | MS.gene028716:CDS |
TGATAACTTTCATATAGTTA+TGG | 0.426309 | 2.1:+8887293 | MS.gene028716:CDS |
CGCCCGCTTGCCTTTCAGAA+TGG | 0.427668 | 2.1:+8888146 | MS.gene028716:CDS |
TCGGCAAAGCATCAGGTATA+GGG | 0.430724 | 2.1:-8887761 | None:intergenic |
ATTGAAACAGGCTTGAGATC+AGG | 0.431785 | 2.1:-8887699 | None:intergenic |
GTGTCCGGATTTGTTCGAAT+TGG | 0.434178 | 2.1:+8887647 | MS.gene028716:CDS |
CCCACGAACCTCAACATTGA+TGG | 0.439264 | 2.1:+8887012 | MS.gene028716:CDS |
TTCCAATCTGCACAGCCTGC+TGG | 0.440262 | 2.1:+8887795 | MS.gene028716:CDS |
GTGTGGCATTCTTGGTCATT+CGG | 0.441108 | 2.1:+8887617 | MS.gene028716:CDS |
CACCAGAAGATGGGGAAGGC+AGG | 0.447556 | 2.1:-8887980 | None:intergenic |
GACCCTATACGCATTGAAAC+AGG | 0.452419 | 2.1:-8887711 | None:intergenic |
CTTCTGCCTTTGCTGCTGAT+GGG | 0.458119 | 2.1:+8888171 | MS.gene028716:CDS |
TTCTCTCAAGGTGACGGTAA+TGG | 0.458348 | 2.1:+8888083 | MS.gene028716:CDS |
CTGCAGCATGTTAGAGGCCG+AGG | 0.461817 | 2.1:-8888003 | None:intergenic |
CATGCTGCAGGGGCGTTCAC+TGG | 0.463024 | 2.1:+8888016 | MS.gene028716:CDS |
TTCCCCATCTTCTGGTGCCT+CGG | 0.463976 | 2.1:+8887986 | MS.gene028716:CDS |
TTGTTTAAATATGAGAAATT+GGG | 0.471358 | 2.1:+8887579 | MS.gene028716:CDS |
TCATTCGGACAAGGTGTGTC+CGG | 0.473062 | 2.1:+8887632 | MS.gene028716:CDS |
ACCATCAATGTTGAGGTTCG+TGG | 0.482688 | 2.1:-8887013 | None:intergenic |
ACAATACCAGTAGCATTGTA+AGG | 0.485262 | 2.1:-8888059 | None:intergenic |
AGCAGCTTTGATTTCTCGAT+CGG | 0.488916 | 2.1:-8887130 | None:intergenic |
GGTCGGCTGCTAACAACAAA+TGG | 0.492153 | 2.1:+8887730 | MS.gene028716:CDS |
GGCCAGCAGGCTGTGCAGAT+TGG | 0.493207 | 2.1:-8887797 | None:intergenic |
GTAGCATTGTAAGGCACAGC+AGG | 0.495456 | 2.1:-8888050 | None:intergenic |
TCAACTTAAAATTGACATTG+AGG | 0.495958 | 2.1:+8889200 | MS.gene028716:CDS |
GGCCAATCAAACAGTGTTCA+AGG | 0.499372 | 2.1:-8887098 | None:intergenic |
CCAGTTGCGCACACCGTCAT+CGG | 0.502662 | 2.1:-8887673 | None:intergenic |
TACTAATGATGATGCTGGTT+CGG | 0.503266 | 2.1:+8888106 | MS.gene028716:CDS |
ATGATGGTCACACGTTTGCC+TGG | 0.503620 | 2.1:-8887186 | None:intergenic |
GGTATCAGCAGCTAGGTTAA+GGG | 0.503804 | 2.1:-8887061 | None:intergenic |
AGCCTGTTTCAATGCGTATA+GGG | 0.504605 | 2.1:+8887709 | MS.gene028716:CDS |
CATAAGAACCATTGTTTGCA+CGG | 0.505572 | 2.1:-8887548 | None:intergenic |
TTCGAATTGGACTCCGATGA+CGG | 0.506766 | 2.1:+8887660 | MS.gene028716:CDS |
GAGGCCGAGGCACCAGAAGA+TGG | 0.507599 | 2.1:-8887990 | None:intergenic |
GAGTCCAATTCGAACAAATC+CGG | 0.508451 | 2.1:-8887651 | None:intergenic |
TCATCTGGACATTTGGGTGC+AGG | 0.508811 | 2.1:+8887359 | MS.gene028716:CDS |
TCAAACAGTGTTCAAGGATG+GGG | 0.514915 | 2.1:-8887092 | None:intergenic |
AGGCCGAGGCACCAGAAGAT+GGG | 0.517665 | 2.1:-8887989 | None:intergenic |
ATCAAACAGTGTTCAAGGAT+GGG | 0.518010 | 2.1:-8887093 | None:intergenic |
GGATTTATTCAACCAAAGGT+TGG | 0.518531 | 2.1:+8887399 | MS.gene028716:CDS |
CAGTTACATAATACACGGCT+AGG | 0.523020 | 2.1:+8889234 | MS.gene028716:CDS |
CAGGCAAAACAAGGTGTGAC+GGG | 0.523916 | 2.1:+8887936 | MS.gene028716:CDS |
TGCCATTCTGAAAGGCAAGC+GGG | 0.524979 | 2.1:-8888148 | None:intergenic |
GTTATGGCCCGTATTGCTCC+TGG | 0.524981 | 2.1:+8887309 | MS.gene028716:CDS |
GCTGTGCCTTACAATGCTAC+TGG | 0.526124 | 2.1:+8888053 | MS.gene028716:CDS |
GGACAACACCAGGAGCAATA+CGG | 0.527892 | 2.1:-8887317 | None:intergenic |
ATTCAACCAAAGGTTGGTCA+AGG | 0.529775 | 2.1:+8887405 | MS.gene028716:CDS |
GACAACACCAGGAGCAATAC+GGG | 0.529788 | 2.1:-8887316 | None:intergenic |
CATTCTTGGTCATTCGGACA+AGG | 0.529981 | 2.1:+8887623 | MS.gene028716:CDS |
AATACACGGCTAGGGCACTC+AGG | 0.531156 | 2.1:+8889243 | MS.gene028716:CDS |
ATGGCCAGAGCATGGAAACC+AGG | 0.532911 | 2.1:+8887168 | MS.gene028716:CDS |
TGCTTACTTCATTGAACGCA+TGG | 0.534408 | 2.1:+8887149 | MS.gene028716:CDS |
TCGGCCTCTAACATGCTGCA+GGG | 0.534466 | 2.1:+8888005 | MS.gene028716:CDS |
TTTCGGATTTATTCAACCAA+AGG | 0.535194 | 2.1:+8887395 | MS.gene028716:CDS |
AATCAAACAGTGTTCAAGGA+TGG | 0.538776 | 2.1:-8887094 | None:intergenic |
CAAAGTCCCATCAGCAGCAA+AGG | 0.539502 | 2.1:-8888177 | None:intergenic |
TGCTAACAACAAATGGCTGC+AGG | 0.539765 | 2.1:+8887737 | MS.gene028716:CDS |
GTGCAGAAGATATGTCTGAT+TGG | 0.546714 | 2.1:+8889160 | MS.gene028716:CDS |
TCTGCACACGCAGACAACTT+CGG | 0.550296 | 2.1:-8889144 | None:intergenic |
GATGACGGTGTGCGCAACTG+GGG | 0.553313 | 2.1:+8887675 | MS.gene028716:CDS |
ATCAGCATCTGATTTGATGA+TGG | 0.554629 | 2.1:-8887202 | None:intergenic |
ACACTGCTGCTGTTCCTGCT+GGG | 0.555998 | 2.1:+8887823 | MS.gene028716:CDS |
CCATCAATGTTGAGGTTCGT+GGG | 0.562309 | 2.1:-8887012 | None:intergenic |
AAATTGTGTAAATTCCCAGC+AGG | 0.568311 | 2.1:-8887837 | None:intergenic |
GGCAGAAGTGCCATTCTGAA+AGG | 0.569849 | 2.1:-8888156 | None:intergenic |
ACAGTGACTGGGACAACACC+AGG | 0.571035 | 2.1:-8887327 | None:intergenic |
CATTATCCACAGCAAGCATA+CGG | 0.571876 | 2.1:-8887866 | None:intergenic |
ATACACGGCTAGGGCACTCA+GGG | 0.577305 | 2.1:+8889244 | MS.gene028716:CDS |
GGCCGAGGCACCAGAAGATG+GGG | 0.581389 | 2.1:-8887988 | None:intergenic |
ACGGCTAGGGCACTCAGGGG+AGG | 0.585773 | 2.1:+8889248 | MS.gene028716:CDS |
ACGAGCTGTGAATGGTGTTA+CGG | 0.587958 | 2.1:-8887467 | None:intergenic |
CGGCCTCTAACATGCTGCAG+GGG | 0.589921 | 2.1:+8888006 | MS.gene028716:CDS |
ATGACGGTGTGCGCAACTGG+GGG | 0.590304 | 2.1:+8887676 | MS.gene028716:CDS |
TGTTTCAATGCGTATAGGGT+CGG | 0.591883 | 2.1:+8887713 | MS.gene028716:CDS |
GATTCAGAGGGACAGTGACT+GGG | 0.592096 | 2.1:-8887338 | None:intergenic |
GCAGGCAAAACAAGGTGTGA+CGG | 0.592101 | 2.1:+8887935 | MS.gene028716:CDS |
TGGAAAGTCCGTGCAAACAA+TGG | 0.594514 | 2.1:+8887540 | MS.gene028716:CDS |
GAGGCACCAGAAGATGGGGA+AGG | 0.597671 | 2.1:-8887984 | None:intergenic |
TCATCAAATCAGATGCTGAT+CGG | 0.600942 | 2.1:+8887205 | MS.gene028716:CDS |
TTGAACGCATGGCCAGAGCA+TGG | 0.602170 | 2.1:+8887160 | MS.gene028716:CDS |
ACGCATGTACGAGCTGTGAA+TGG | 0.603693 | 2.1:-8887475 | None:intergenic |
TTTGGTTGAATAAATCCGAA+AGG | 0.604713 | 2.1:-8887393 | None:intergenic |
CAGGAACAGCAGCAGTGTTG+CGG | 0.605989 | 2.1:-8887818 | None:intergenic |
AAATGAGACCATCAATGTTG+AGG | 0.606614 | 2.1:-8887020 | None:intergenic |
GTTAAGGGTCAAACCCTCAT+CGG | 0.607722 | 2.1:-8887046 | None:intergenic |
AATGGTACTAATGATGATGC+TGG | 0.609753 | 2.1:+8888101 | MS.gene028716:CDS |
ATGATTCGGTATCAGCAGCT+AGG | 0.610867 | 2.1:-8887068 | None:intergenic |
TAATGACCGTATGCTTGCTG+TGG | 0.612476 | 2.1:+8887860 | MS.gene028716:CDS |
TGTTCTTGCTGCTCAAACAG+CGG | 0.615374 | 2.1:+8887911 | MS.gene028716:CDS |
ACAGCGGTGCAGGCAAAACA+AGG | 0.616066 | 2.1:+8887927 | MS.gene028716:CDS |
TAAATCCGAAAGGCAAACCA+TGG | 0.623740 | 2.1:-8887383 | None:intergenic |
CAAATGTCCAGATGATTCAG+AGG | 0.632735 | 2.1:-8887351 | None:intergenic |
GACAACGAGCAAAGACACAT+TGG | 0.642621 | 2.1:+8889340 | MS.gene028716:CDS |
GAGCAGCATCAAGTTTGTGA+TGG | 0.649177 | 2.1:-8887242 | None:intergenic |
GTGCCATTCTGAAAGGCAAG+CGG | 0.650378 | 2.1:-8888149 | None:intergenic |
AGTTACATAATACACGGCTA+GGG | 0.651975 | 2.1:+8889235 | MS.gene028716:CDS |
TTTCTCGATCGGCCAAAACG+CGG | 0.652078 | 2.1:-8887119 | None:intergenic |
TGAAAGTTATCATAGAGCCA+TGG | 0.655929 | 2.1:-8887282 | None:intergenic |
CAAACAGTGTTCAAGGATGG+GGG | 0.667420 | 2.1:-8887091 | None:intergenic |
AAATGTCCAGATGATTCAGA+GGG | 0.671219 | 2.1:-8887350 | None:intergenic |
GTCGACAGTTACATAATACA+CGG | 0.705872 | 2.1:+8889229 | MS.gene028716:CDS |
TACACGGCTAGGGCACTCAG+GGG | 0.747639 | 2.1:+8889245 | MS.gene028716:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTGTTTAAATATGAGAAATT+GGG | + | chr2.1:8887579-8887598 | MS.gene028716:CDS | 15.0% |
!! | TTTGTTTAAATATGAGAAAT+TGG | + | chr2.1:8887578-8887597 | MS.gene028716:CDS | 15.0% |
!! | TAATAATATAGGATAGTGAT+CGG | - | chr2.1:8888992-8889011 | None:intergenic | 20.0% |
!! | TGATAACTTTCATATAGTTA+TGG | + | chr2.1:8887293-8887312 | MS.gene028716:CDS | 20.0% |
!!! | GAAGTTCTTCAATTTTATTA+CGG | - | chr2.1:8888447-8888466 | None:intergenic | 20.0% |
! | ACATTTGATTCATCATACAT+AGG | - | chr2.1:8888269-8888288 | None:intergenic | 25.0% |
! | GGAGAACACTTTAATAATAT+AGG | - | chr2.1:8889003-8889022 | None:intergenic | 25.0% |
! | GTATGATGAATCAAATGTAA+TGG | + | chr2.1:8888271-8888290 | MS.gene028716:intron | 25.0% |
! | TCAACTTAAAATTGACATTG+AGG | + | chr2.1:8889200-8889219 | MS.gene028716:CDS | 25.0% |
ACAAATTATTTGCAAGAGCA+CGG | - | chr2.1:8888918-8888937 | None:intergenic | 30.0% | |
AGACTCTTAAACCAAGTAAA+AGG | - | chr2.1:8888862-8888881 | None:intergenic | 30.0% | |
CAAACTGATTAGATAGTTGA+CGG | - | chr2.1:8888690-8888709 | None:intergenic | 30.0% | |
GTATGTTTGAATTGCGAAAA+AGG | + | chr2.1:8889280-8889299 | MS.gene028716:CDS | 30.0% | |
TATGTCAAGATGATGCTTAT+TGG | + | chr2.1:8889316-8889335 | MS.gene028716:CDS | 30.0% | |
TCACTTAAGAAGAGAATATC+CGG | - | chr2.1:8888412-8888431 | None:intergenic | 30.0% | |
TCATATCACTATTGAGATTG+TGG | + | chr2.1:8888582-8888601 | MS.gene028716:intron | 30.0% | |
TGATGAATCAAATGTAATGG+CGG | + | chr2.1:8888274-8888293 | MS.gene028716:intron | 30.0% | |
TTTACTTGGTTTAAGAGTCT+TGG | + | chr2.1:8888862-8888881 | MS.gene028716:intron | 30.0% | |
TTTCGGATTTATTCAACCAA+AGG | + | chr2.1:8887395-8887414 | MS.gene028716:CDS | 30.0% | |
TTTGGTTGAATAAATCCGAA+AGG | - | chr2.1:8887396-8887415 | None:intergenic | 30.0% | |
! | ACTTTGGGAAATGATGTAAT+AGG | + | chr2.1:8888194-8888213 | MS.gene028716:CDS | 30.0% |
! | AGGATTTTGTTACTAACTCT+TGG | + | chr2.1:8889094-8889113 | MS.gene028716:intron | 30.0% |
! | ATTTTCGTTACGAAAATGCA+TGG | + | chr2.1:8889052-8889071 | MS.gene028716:intron | 30.0% |
! | GCTACTAAATTCATTTTCCT+TGG | - | chr2.1:8888319-8888338 | None:intergenic | 30.0% |
!!! | AATTGGGTGTTTTTTGTTAC+AGG | + | chr2.1:8887595-8887614 | MS.gene028716:CDS | 30.0% |
!!! | CACAAAGTTTTTTCATGCAT+CGG | + | chr2.1:8889383-8889402 | MS.gene028716:intron | 30.0% |
AAATGAGACCATCAATGTTG+AGG | - | chr2.1:8887023-8887042 | None:intergenic | 35.0% | |
AAATGTCCAGATGATTCAGA+GGG | - | chr2.1:8887353-8887372 | None:intergenic | 35.0% | |
AAATTGTGTAAATTCCCAGC+AGG | - | chr2.1:8887840-8887859 | None:intergenic | 35.0% | |
AAGACACATTGGTATAAGGA+CGG | + | chr2.1:8889351-8889370 | MS.gene028716:intron | 35.0% | |
AAGAGTTTCAATAGTAGCGT+TGG | - | chr2.1:8888956-8888975 | None:intergenic | 35.0% | |
AATCAAACAGTGTTCAAGGA+TGG | - | chr2.1:8887097-8887116 | None:intergenic | 35.0% | |
AATTGGAACATCTGACAAAC+CGG | - | chr2.1:8888830-8888849 | None:intergenic | 35.0% | |
ACAATACCAGTAGCATTGTA+AGG | - | chr2.1:8888062-8888081 | None:intergenic | 35.0% | |
AGAGTTTCAATAGTAGCGTT+GGG | - | chr2.1:8888955-8888974 | None:intergenic | 35.0% | |
AGCAAAGACACATTGGTATA+AGG | + | chr2.1:8889347-8889366 | MS.gene028716:intron | 35.0% | |
AGTTACATAATACACGGCTA+GGG | + | chr2.1:8889235-8889254 | MS.gene028716:CDS | 35.0% | |
ATCAAACAGTGTTCAAGGAT+GGG | - | chr2.1:8887096-8887115 | None:intergenic | 35.0% | |
ATCCTTGAACACTGTTTGAT+TGG | + | chr2.1:8887096-8887115 | MS.gene028716:CDS | 35.0% | |
ATTAGGATAGCCATAATAGC+CGG | - | chr2.1:8888635-8888654 | None:intergenic | 35.0% | |
ATTTAGTAGCGTGGAATTGT+CGG | + | chr2.1:8888329-8888348 | MS.gene028716:intron | 35.0% | |
CAACTATCTAATCAGTTTGC+AGG | + | chr2.1:8888691-8888710 | MS.gene028716:intron | 35.0% | |
CATAAGAACCATTGTTTGCA+CGG | - | chr2.1:8887551-8887570 | None:intergenic | 35.0% | |
GATGAATCAAATGTAATGGC+GGG | + | chr2.1:8888275-8888294 | MS.gene028716:intron | 35.0% | |
GCAATTCAAACATACGAATC+TGG | - | chr2.1:8889275-8889294 | None:intergenic | 35.0% | |
GGAAAATGAATTTAGTAGCG+TGG | + | chr2.1:8888320-8888339 | MS.gene028716:intron | 35.0% | |
GGATTTATTCAACCAAAGGT+TGG | + | chr2.1:8887399-8887418 | MS.gene028716:CDS | 35.0% | |
GTAAAAGGATAACCCTCAAT+TGG | - | chr2.1:8888847-8888866 | None:intergenic | 35.0% | |
GTAACAAAATCCTTAAACCC+CGG | - | chr2.1:8889087-8889106 | None:intergenic | 35.0% | |
GTCGACAGTTACATAATACA+CGG | + | chr2.1:8889229-8889248 | MS.gene028716:CDS | 35.0% | |
GTGCTCTTGCAAATAATTTG+TGG | + | chr2.1:8888917-8888936 | MS.gene028716:intron | 35.0% | |
TATTATGGCTATCCTAATGG+AGG | + | chr2.1:8888637-8888656 | MS.gene028716:intron | 35.0% | |
TCATCAAATCAGATGCTGAT+CGG | + | chr2.1:8887205-8887224 | MS.gene028716:CDS | 35.0% | |
TCTGAATCATCTGGACATTT+GGG | + | chr2.1:8887353-8887372 | MS.gene028716:CDS | 35.0% | |
TGAAAGTTATCATAGAGCCA+TGG | - | chr2.1:8887285-8887304 | None:intergenic | 35.0% | |
TTGTCAGATGTTCCAATTGA+GGG | + | chr2.1:8888832-8888851 | MS.gene028716:intron | 35.0% | |
TTTGTCAGATGTTCCAATTG+AGG | + | chr2.1:8888831-8888850 | MS.gene028716:intron | 35.0% | |
! | AAATGCATGGCATTTAGAAC+CGG | + | chr2.1:8889065-8889084 | MS.gene028716:intron | 35.0% |
! | AATGGTACTAATGATGATGC+TGG | + | chr2.1:8888101-8888120 | MS.gene028716:CDS | 35.0% |
! | ACTGGTATTGTTTTCTCTCA+AGG | + | chr2.1:8888071-8888090 | MS.gene028716:CDS | 35.0% |
! | ATCAGCATCTGATTTGATGA+TGG | - | chr2.1:8887205-8887224 | None:intergenic | 35.0% |
! | ATTGTTTTCTCTCAAGGTGA+CGG | + | chr2.1:8888077-8888096 | MS.gene028716:CDS | 35.0% |
! | CATCAAGTTTGTGATGGAAT+TGG | - | chr2.1:8887239-8887258 | None:intergenic | 35.0% |
! | CTAAATTCATTTTCCTTGGC+AGG | - | chr2.1:8888315-8888334 | None:intergenic | 35.0% |
! | TACTAATGATGATGCTGGTT+CGG | + | chr2.1:8888106-8888125 | MS.gene028716:CDS | 35.0% |
! | TTGAGGGTTATCCTTTTACT+TGG | + | chr2.1:8888848-8888867 | MS.gene028716:intron | 35.0% |
! | TTTTGTTACTAACTCTTGGC+AGG | + | chr2.1:8889098-8889117 | MS.gene028716:intron | 35.0% |
!! | CAACATTGATGGTCTCATTT+TGG | + | chr2.1:8887023-8887042 | MS.gene028716:CDS | 35.0% |
!! | TGCTCTTCTTGCTATTAAAC+AGG | + | chr2.1:8887887-8887906 | MS.gene028716:CDS | 35.0% |
!! | TTTCTCTTGATGATGACGTA+GGG | + | chr2.1:8889436-8889455 | MS.gene028716:intron | 35.0% |
!!! | ACTTTCCACTCCTTTTTCAA+AGG | - | chr2.1:8887528-8887547 | None:intergenic | 35.0% |
!!! | GAAGAACTTCGTTTTTTGCT+TGG | + | chr2.1:8888457-8888476 | MS.gene028716:intron | 35.0% |
!!! | GATGCGATTTACCTTTTTTC+GGG | - | chr2.1:8889415-8889434 | None:intergenic | 35.0% |
!!! | GGATGCGATTTACCTTTTTT+CGG | - | chr2.1:8889416-8889435 | None:intergenic | 35.0% |
AAACCATTGATGAGCCAAGA+TGG | - | chr2.1:8888787-8888806 | None:intergenic | 40.0% | |
AAGCCTGTTTCAATGCGTAT+AGG | + | chr2.1:8887708-8887727 | MS.gene028716:CDS | 40.0% | |
AAGTCACCAAAAATGCACCA+AGG | - | chr2.1:8888718-8888737 | None:intergenic | 40.0% | |
AATTGCGAAAAAGGATGCAG+CGG | + | chr2.1:8889289-8889308 | MS.gene028716:CDS | 40.0% | |
AGACACATTGGTATAAGGAC+GGG | + | chr2.1:8889352-8889371 | MS.gene028716:intron | 40.0% | |
AGCCTGTTTCAATGCGTATA+GGG | + | chr2.1:8887709-8887728 | MS.gene028716:CDS | 40.0% | |
ATAGGATCTGATGTTAGTGC+TGG | + | chr2.1:8888212-8888231 | MS.gene028716:intron | 40.0% | |
ATTGAAACAGGCTTGAGATC+AGG | - | chr2.1:8887702-8887721 | None:intergenic | 40.0% | |
CAAATGTCCAGATGATTCAG+AGG | - | chr2.1:8887354-8887373 | None:intergenic | 40.0% | |
CAAGGAATTGGAAGCTTTCT+TGG | + | chr2.1:8887423-8887442 | MS.gene028716:CDS | 40.0% | |
CAGTTACATAATACACGGCT+AGG | + | chr2.1:8889234-8889253 | MS.gene028716:CDS | 40.0% | |
CATTATCCACAGCAAGCATA+CGG | - | chr2.1:8887869-8887888 | None:intergenic | 40.0% | |
CTACGTCATCATCAAGAGAA+AGG | - | chr2.1:8889437-8889456 | None:intergenic | 40.0% | |
CTCTGAATCATCTGGACATT+TGG | + | chr2.1:8887352-8887371 | MS.gene028716:CDS | 40.0% | |
GAGATTGTGGATTCTGTTCA+TGG | + | chr2.1:8888595-8888614 | MS.gene028716:intron | 40.0% | |
GAGTCCAATTCGAACAAATC+CGG | - | chr2.1:8887654-8887673 | None:intergenic | 40.0% | |
GGCTATTATGGCTATCCTAA+TGG | + | chr2.1:8888634-8888653 | MS.gene028716:intron | 40.0% | |
GTGCAGAAGATATGTCTGAT+TGG | + | chr2.1:8889160-8889179 | MS.gene028716:CDS | 40.0% | |
TAAATCCGAAAGGCAAACCA+TGG | - | chr2.1:8887386-8887405 | None:intergenic | 40.0% | |
TAGGATCTGATGTTAGTGCT+GGG | + | chr2.1:8888213-8888232 | MS.gene028716:intron | 40.0% | |
TCAAACAGTGTTCAAGGATG+GGG | - | chr2.1:8887095-8887114 | None:intergenic | 40.0% | |
TGCTTACTTCATTGAACGCA+TGG | + | chr2.1:8887149-8887168 | MS.gene028716:CDS | 40.0% | |
TGGATTCTGTTCATGGTACT+TGG | + | chr2.1:8888602-8888621 | MS.gene028716:intron | 40.0% | |
TGTTTCAATGCGTATAGGGT+CGG | + | chr2.1:8887713-8887732 | MS.gene028716:CDS | 40.0% | |
TTAAGGTCGGGAATTGTACT+CGG | - | chr2.1:8888367-8888386 | None:intergenic | 40.0% | |
TTTAGTAGCGTGGAATTGTC+GGG | + | chr2.1:8888330-8888349 | MS.gene028716:intron | 40.0% | |
! | AATGCATGGCATTTAGAACC+GGG | + | chr2.1:8889066-8889085 | MS.gene028716:intron | 40.0% |
! | AGCAGCTTTGATTTCTCGAT+CGG | - | chr2.1:8887133-8887152 | None:intergenic | 40.0% |
! | ATTCAACCAAAGGTTGGTCA+AGG | + | chr2.1:8887405-8887424 | MS.gene028716:CDS | 40.0% |
! | GTGCAGATTGGAACACATTT+TGG | - | chr2.1:8887788-8887807 | None:intergenic | 40.0% |
! | TAAAGTGTTCTCCTTCACCT+CGG | + | chr2.1:8889010-8889029 | MS.gene028716:intron | 40.0% |
!! | CTTTCTCTTGATGATGACGT+AGG | + | chr2.1:8889435-8889454 | MS.gene028716:intron | 40.0% |
!!! | GATTGGAACACATTTTGGCT+CGG | - | chr2.1:8887783-8887802 | None:intergenic | 40.0% |
!!! | GGTGTTTTTTGTTACAGGTG+TGG | + | chr2.1:8887600-8887619 | MS.gene028716:CDS | 40.0% |
!!! | GTTTTTTCATGCATCGGCTA+CGG | + | chr2.1:8889389-8889408 | MS.gene028716:intron | 40.0% |
ACCATCAATGTTGAGGTTCG+TGG | - | chr2.1:8887016-8887035 | None:intergenic | 45.0% | |
AGACCATCTTGGCTCATCAA+TGG | + | chr2.1:8888781-8888800 | MS.gene028716:intron | 45.0% | |
AGGATCTGATGTTAGTGCTG+GGG | + | chr2.1:8888214-8888233 | MS.gene028716:intron | 45.0% | |
ATAGGATAGTGATCGGAAGC+AGG | - | chr2.1:8888985-8889004 | None:intergenic | 45.0% | |
CAAACAGTGTTCAAGGATGG+GGG | - | chr2.1:8887094-8887113 | None:intergenic | 45.0% | |
CATGGTACTTGGAGAATGAC+CGG | + | chr2.1:8888613-8888632 | MS.gene028716:intron | 45.0% | |
CATTCTTGGTCATTCGGACA+AGG | + | chr2.1:8887623-8887642 | MS.gene028716:CDS | 45.0% | |
CCAATTCCTTGACCAACCTT+TGG | - | chr2.1:8887414-8887433 | None:intergenic | 45.0% | |
CCATCAATGTTGAGGTTCGT+GGG | - | chr2.1:8887015-8887034 | None:intergenic | 45.0% | |
CTAATCAGTTTGCAGGTCCT+TGG | + | chr2.1:8888698-8888717 | MS.gene028716:intron | 45.0% | |
GAATATCCGGATTGAAGTGC+CGG | - | chr2.1:8888399-8888418 | None:intergenic | 45.0% | |
GACAACGAGCAAAGACACAT+TGG | + | chr2.1:8889340-8889359 | MS.gene028716:CDS | 45.0% | |
GACACATTGGTATAAGGACG+GGG | + | chr2.1:8889353-8889372 | MS.gene028716:intron | 45.0% | |
GACCCTATACGCATTGAAAC+AGG | - | chr2.1:8887714-8887733 | None:intergenic | 45.0% | |
GAGCAGCATCAAGTTTGTGA+TGG | - | chr2.1:8887245-8887264 | None:intergenic | 45.0% | |
GGCCAATCAAACAGTGTTCA+AGG | - | chr2.1:8887101-8887120 | None:intergenic | 45.0% | |
GGTATCAGCAGCTAGGTTAA+GGG | - | chr2.1:8887064-8887083 | None:intergenic | 45.0% | |
GTGTGGCATTCTTGGTCATT+CGG | + | chr2.1:8887617-8887636 | MS.gene028716:CDS | 45.0% | |
GTTAAGGGTCAAACCCTCAT+CGG | - | chr2.1:8887049-8887068 | None:intergenic | 45.0% | |
TAAGGTCGGGAATTGTACTC+GGG | - | chr2.1:8888366-8888385 | None:intergenic | 45.0% | |
TGATGAGCCAAGATGGTCTA+GGG | - | chr2.1:8888780-8888799 | None:intergenic | 45.0% | |
TGCTAACAACAAATGGCTGC+AGG | + | chr2.1:8887737-8887756 | MS.gene028716:CDS | 45.0% | |
TGGAAAGTCCGTGCAAACAA+TGG | + | chr2.1:8887540-8887559 | MS.gene028716:CDS | 45.0% | |
TGGAGAATGACCGGCTATTA+TGG | + | chr2.1:8888622-8888641 | MS.gene028716:intron | 45.0% | |
TGTTACAGGTGTGGCATTCT+TGG | + | chr2.1:8887609-8887628 | MS.gene028716:CDS | 45.0% | |
TGTTCTTGCTGCTCAAACAG+CGG | + | chr2.1:8887911-8887930 | MS.gene028716:CDS | 45.0% | |
TTAGTAGCGTGGAATTGTCG+GGG | + | chr2.1:8888331-8888350 | MS.gene028716:intron | 45.0% | |
TTCAAGGATGGGGGATGATT+CGG | - | chr2.1:8887085-8887104 | None:intergenic | 45.0% | |
TTCGAATTGGACTCCGATGA+CGG | + | chr2.1:8887660-8887679 | MS.gene028716:CDS | 45.0% | |
TTGACGGAGAAAATTCCACG+CGG | - | chr2.1:8888674-8888693 | None:intergenic | 45.0% | |
TTGATGAGCCAAGATGGTCT+AGG | - | chr2.1:8888781-8888800 | None:intergenic | 45.0% | |
TTTGCTGCTGATGGGACTTT+GGG | + | chr2.1:8888179-8888198 | MS.gene028716:CDS | 45.0% | |
! | ACGAGCTGTGAATGGTGTTA+CGG | - | chr2.1:8887470-8887489 | None:intergenic | 45.0% |
! | ACTTGATGCTGCTCGCATTT+TGG | + | chr2.1:8887251-8887270 | MS.gene028716:CDS | 45.0% |
! | ATGCATGGCATTTAGAACCG+GGG | + | chr2.1:8889067-8889086 | MS.gene028716:intron | 45.0% |
! | CCAAAGGTTGGTCAAGGAAT+TGG | + | chr2.1:8887411-8887430 | MS.gene028716:CDS | 45.0% |
! | GCATTTAGAACCGGGGTTTA+AGG | + | chr2.1:8889074-8889093 | MS.gene028716:intron | 45.0% |
! | GTGTCCGGATTTGTTCGAAT+TGG | + | chr2.1:8887647-8887666 | MS.gene028716:CDS | 45.0% |
! | TAATGACCGTATGCTTGCTG+TGG | + | chr2.1:8887860-8887879 | MS.gene028716:CDS | 45.0% |
! | TCGGCAAAGCATCAGGTATA+GGG | - | chr2.1:8887764-8887783 | None:intergenic | 45.0% |
! | TGTCACTGCGCCTTTGAAAA+AGG | + | chr2.1:8887515-8887534 | MS.gene028716:CDS | 45.0% |
! | TTCTCTCAAGGTGACGGTAA+TGG | + | chr2.1:8888083-8888102 | MS.gene028716:CDS | 45.0% |
!! | ATGATTCGGTATCAGCAGCT+AGG | - | chr2.1:8887071-8887090 | None:intergenic | 45.0% |
ACGCATGTACGAGCTGTGAA+TGG | - | chr2.1:8887478-8887497 | None:intergenic | 50.0% | |
ACTTCTGCCTTTGCTGCTGA+TGG | + | chr2.1:8888170-8888189 | MS.gene028716:CDS | 50.0% | |
ATGATGGTCACACGTTTGCC+TGG | - | chr2.1:8887189-8887208 | None:intergenic | 50.0% | |
CAAAGTCCCATCAGCAGCAA+AGG | - | chr2.1:8888180-8888199 | None:intergenic | 50.0% | |
CACTGTCCCTCTGAATCATC+TGG | + | chr2.1:8887344-8887363 | MS.gene028716:CDS | 50.0% | |
CAGGCAAAACAAGGTGTGAC+GGG | + | chr2.1:8887936-8887955 | MS.gene028716:CDS | 50.0% | |
CCCACGAACCTCAACATTGA+TGG | + | chr2.1:8887012-8887031 | MS.gene028716:CDS | 50.0% | |
CCGACCTTAAGTACCTAGTC+CGG | + | chr2.1:8888377-8888396 | MS.gene028716:intron | 50.0% | |
CGGTATCAGCAGCTAGGTTA+AGG | - | chr2.1:8887065-8887084 | None:intergenic | 50.0% | |
CTTCTGCCTTTGCTGCTGAT+GGG | + | chr2.1:8888171-8888190 | MS.gene028716:CDS | 50.0% | |
CTTTGCTGCTGATGGGACTT+TGG | + | chr2.1:8888178-8888197 | MS.gene028716:CDS | 50.0% | |
GACAACACCAGGAGCAATAC+GGG | - | chr2.1:8887319-8887338 | None:intergenic | 50.0% | |
GATTCAGAGGGACAGTGACT+GGG | - | chr2.1:8887341-8887360 | None:intergenic | 50.0% | |
GCAGGCAAAACAAGGTGTGA+CGG | + | chr2.1:8887935-8887954 | MS.gene028716:CDS | 50.0% | |
GCAGTTCTACGACCTCCATT+AGG | - | chr2.1:8888652-8888671 | None:intergenic | 50.0% | |
GCTGTGCCTTACAATGCTAC+TGG | + | chr2.1:8888053-8888072 | MS.gene028716:CDS | 50.0% | |
GGACAACACCAGGAGCAATA+CGG | - | chr2.1:8887320-8887339 | None:intergenic | 50.0% | |
GGTCGGCTGCTAACAACAAA+TGG | + | chr2.1:8887730-8887749 | MS.gene028716:CDS | 50.0% | |
GTAGCATTGTAAGGCACAGC+AGG | - | chr2.1:8888053-8888072 | None:intergenic | 50.0% | |
TCATCTGGACATTTGGGTGC+AGG | + | chr2.1:8887359-8887378 | MS.gene028716:CDS | 50.0% | |
TCATTCGGACAAGGTGTGTC+CGG | + | chr2.1:8887632-8887651 | MS.gene028716:CDS | 50.0% | |
TCTCGACGCTAGTGAGAAGA+GGG | + | chr2.1:8888747-8888766 | MS.gene028716:intron | 50.0% | |
TCTGCACACGCAGACAACTT+CGG | - | chr2.1:8889147-8889166 | None:intergenic | 50.0% | |
TGATTCAGAGGGACAGTGAC+TGG | - | chr2.1:8887342-8887361 | None:intergenic | 50.0% | |
TGTCTTCCTATAGACCGCAC+CGG | + | chr2.1:8888490-8888509 | MS.gene028716:intron | 50.0% | |
TTCTCGACGCTAGTGAGAAG+AGG | + | chr2.1:8888746-8888765 | MS.gene028716:intron | 50.0% | |
TTTCTCGATCGGCCAAAACG+CGG | - | chr2.1:8887122-8887141 | None:intergenic | 50.0% | |
TTTGCCTGGTTTCCATGCTC+TGG | - | chr2.1:8887175-8887194 | None:intergenic | 50.0% | |
! | AGTGCCGGACTAGGTACTTA+AGG | - | chr2.1:8888384-8888403 | None:intergenic | 50.0% |
! | ATCTGATGTTAGTGCTGGGG+GGG | + | chr2.1:8888217-8888236 | MS.gene028716:intron | 50.0% |
! | CAGGTCCATGGTTTGCCTTT+CGG | + | chr2.1:8887378-8887397 | MS.gene028716:CDS | 50.0% |
! | CCGGACTAGGTACTTAAGGT+CGG | - | chr2.1:8888380-8888399 | None:intergenic | 50.0% |
! | CGGACTAGGTACTTAAGGTC+GGG | - | chr2.1:8888379-8888398 | None:intergenic | 50.0% |
! | CTCGGCAAAGCATCAGGTAT+AGG | - | chr2.1:8887765-8887784 | None:intergenic | 50.0% |
! | CTGCGCCTTTGAAAAAGGAG+TGG | + | chr2.1:8887520-8887539 | MS.gene028716:CDS | 50.0% |
! | GATCTGATGTTAGTGCTGGG+GGG | + | chr2.1:8888216-8888235 | MS.gene028716:intron | 50.0% |
! | GGATCTGATGTTAGTGCTGG+GGG | + | chr2.1:8888215-8888234 | MS.gene028716:intron | 50.0% |
! | GTGCCATTCTGAAAGGCAAG+CGG | - | chr2.1:8888152-8888171 | None:intergenic | 50.0% |
! | TGCCATTCTGAAAGGCAAGC+GGG | - | chr2.1:8888151-8888170 | None:intergenic | 50.0% |
! | TTCATTTTCCTTGGCAGGCC+TGG | - | chr2.1:8888310-8888329 | None:intergenic | 50.0% |
!! | AAACAAGGTGTGACGGGTTC+TGG | + | chr2.1:8887942-8887961 | MS.gene028716:CDS | 50.0% |
!! | CGTCAAGCAGTTATCGACTC+CGG | + | chr2.1:8888808-8888827 | MS.gene028716:intron | 50.0% |
!! | CTGTTTGATTGGCCGCGTTT+TGG | + | chr2.1:8887107-8887126 | MS.gene028716:CDS | 50.0% |
!! | GCAGGTCCTTGGTGCATTTT+TGG | + | chr2.1:8888709-8888728 | MS.gene028716:intron | 50.0% |
!! | GGCAGAAGTGCCATTCTGAA+AGG | - | chr2.1:8888159-8888178 | None:intergenic | 50.0% |
!! | GGTCTCATTTTGGCCGATGA+GGG | + | chr2.1:8887033-8887052 | MS.gene028716:CDS | 50.0% |
!! | TGGTCTCATTTTGGCCGATG+AGG | + | chr2.1:8887032-8887051 | MS.gene028716:CDS | 50.0% |
!!! | GCGGGGGTCTAGCTTTATTT+TGG | + | chr2.1:8888518-8888537 | MS.gene028716:intron | 50.0% |
!!! | TTTTGGCTCGGCAAAGCATC+AGG | - | chr2.1:8887771-8887790 | None:intergenic | 50.0% |
AACACTGCTGCTGTTCCTGC+TGG | + | chr2.1:8887822-8887841 | MS.gene028716:CDS | 55.0% | |
ACACTGCTGCTGTTCCTGCT+GGG | + | chr2.1:8887823-8887842 | MS.gene028716:CDS | 55.0% | |
ACAGCGGTGCAGGCAAAACA+AGG | + | chr2.1:8887927-8887946 | MS.gene028716:CDS | 55.0% | |
ACAGTGACTGGGACAACACC+AGG | - | chr2.1:8887330-8887349 | None:intergenic | 55.0% | |
ATCGGCTACGGCCCGAAAAA+AGG | + | chr2.1:8889401-8889420 | MS.gene028716:intron | 55.0% | |
ATGGCCAGAGCATGGAAACC+AGG | + | chr2.1:8887168-8887187 | MS.gene028716:CDS | 55.0% | |
CACCTCGGCTTCAGCATCAT+AGG | + | chr2.1:8889025-8889044 | MS.gene028716:intron | 55.0% | |
CAGGAACAGCAGCAGTGTTG+CGG | - | chr2.1:8887821-8887840 | None:intergenic | 55.0% | |
CCTAGTCCGGCACTTCAATC+CGG | + | chr2.1:8888390-8888409 | MS.gene028716:intron | 55.0% | |
CTCGACGCTAGTGAGAAGAG+GGG | + | chr2.1:8888748-8888767 | MS.gene028716:intron | 55.0% | |
GACATTTGGGTGCAGGTCCA+TGG | + | chr2.1:8887366-8887385 | MS.gene028716:CDS | 55.0% | |
GTTATGGCCCGTATTGCTCC+TGG | + | chr2.1:8887309-8887328 | MS.gene028716:CDS | 55.0% | |
TCGACGCTAGTGAGAAGAGG+GGG | + | chr2.1:8888749-8888768 | MS.gene028716:intron | 55.0% | |
TCGGCCTCTAACATGCTGCA+GGG | + | chr2.1:8888005-8888024 | MS.gene028716:CDS | 55.0% | |
TGATGCTGAAGCCGAGGTGA+AGG | - | chr2.1:8889024-8889043 | None:intergenic | 55.0% | |
TTCCAATCTGCACAGCCTGC+TGG | + | chr2.1:8887795-8887814 | MS.gene028716:CDS | 55.0% | |
TTCCCCATCTTCTGGTGCCT+CGG | + | chr2.1:8887986-8888005 | MS.gene028716:CDS | 55.0% | |
TTCCTGCCTTCCCCATCTTC+TGG | + | chr2.1:8887978-8887997 | MS.gene028716:CDS | 55.0% | |
TTGAACGCATGGCCAGAGCA+TGG | + | chr2.1:8887160-8887179 | MS.gene028716:CDS | 55.0% | |
! | AATACACGGCTAGGGCACTC+AGG | + | chr2.1:8889243-8889262 | MS.gene028716:CDS | 55.0% |
! | ATACACGGCTAGGGCACTCA+GGG | + | chr2.1:8889244-8889263 | MS.gene028716:CDS | 55.0% |
! | CTGCTCGCATTTTGGACGAG+GGG | + | chr2.1:8887259-8887278 | MS.gene028716:CDS | 55.0% |
! | GCTGCTCGCATTTTGGACGA+GGG | + | chr2.1:8887258-8887277 | MS.gene028716:CDS | 55.0% |
! | TGCTGCTCGCATTTTGGACG+AGG | + | chr2.1:8887257-8887276 | MS.gene028716:CDS | 55.0% |
AACCTTTCCTCCACCGCTCG+TGG | - | chr2.1:8888892-8888911 | None:intergenic | 60.0% | |
ACGCCCCTGCAGCATGTTAG+AGG | - | chr2.1:8888012-8888031 | None:intergenic | 60.0% | |
ATGACGGTGTGCGCAACTGG+GGG | + | chr2.1:8887676-8887695 | MS.gene028716:CDS | 60.0% | |
CACCAGAAGATGGGGAAGGC+AGG | - | chr2.1:8887983-8888002 | None:intergenic | 60.0% | |
CCAGTTGCGCACACCGTCAT+CGG | - | chr2.1:8887676-8887695 | None:intergenic | 60.0% | |
CCTCTACCGGTGCGGTCTAT+AGG | - | chr2.1:8888499-8888518 | None:intergenic | 60.0% | |
CGCCCGCTTGCCTTTCAGAA+TGG | + | chr2.1:8888146-8888165 | MS.gene028716:CDS | 60.0% | |
CGCCTATGATGCTGAAGCCG+AGG | - | chr2.1:8889030-8889049 | None:intergenic | 60.0% | |
CGGCCTCTAACATGCTGCAG+GGG | + | chr2.1:8888006-8888025 | MS.gene028716:CDS | 60.0% | |
CTCGGCCTCTAACATGCTGC+AGG | + | chr2.1:8888004-8888023 | MS.gene028716:CDS | 60.0% | |
CTGCAGCATGTTAGAGGCCG+AGG | - | chr2.1:8888006-8888025 | None:intergenic | 60.0% | |
GAGTCTTGGTACGCCACGAG+CGG | + | chr2.1:8888876-8888895 | MS.gene028716:intron | 60.0% | |
GCGTGGAATTGTCGGGGTGT+AGG | + | chr2.1:8888337-8888356 | MS.gene028716:intron | 60.0% | |
GGCGCAACCCTAGACCATCT+TGG | + | chr2.1:8888770-8888789 | MS.gene028716:intron | 60.0% | |
TGCTGCTCAAACAGCGGTGC+AGG | + | chr2.1:8887917-8887936 | MS.gene028716:CDS | 60.0% | |
! | AGGCCGAGGCACCAGAAGAT+GGG | - | chr2.1:8887992-8888011 | None:intergenic | 60.0% |
! | ATAGACCGCACCGGTAGAGG+CGG | + | chr2.1:8888499-8888518 | MS.gene028716:intron | 60.0% |
! | CCTATAGACCGCACCGGTAG+AGG | + | chr2.1:8888496-8888515 | MS.gene028716:intron | 60.0% |
! | CGATGACGGTGTGCGCAACT+GGG | + | chr2.1:8887674-8887693 | MS.gene028716:CDS | 60.0% |
! | GAGGCACCAGAAGATGGGGA+AGG | - | chr2.1:8887987-8888006 | None:intergenic | 60.0% |
! | GATGACGGTGTGCGCAACTG+GGG | + | chr2.1:8887675-8887694 | MS.gene028716:CDS | 60.0% |
! | GCATTTTGGACGAGGGGCCA+TGG | + | chr2.1:8887265-8887284 | MS.gene028716:CDS | 60.0% |
! | TACACGGCTAGGGCACTCAG+GGG | + | chr2.1:8889245-8889264 | MS.gene028716:CDS | 60.0% |
!! | AATGGCGGGTCCTGATGACC+AGG | + | chr2.1:8888289-8888308 | MS.gene028716:intron | 60.0% |
!! | CCGGATTGAAGTGCCGGACT+AGG | - | chr2.1:8888393-8888412 | None:intergenic | 60.0% |
AGCTAGACCCCCGCCTCTAC+CGG | - | chr2.1:8888512-8888531 | None:intergenic | 65.0% | |
CCTGATGACCAGGCCTGCCA+AGG | + | chr2.1:8888299-8888318 | MS.gene028716:intron | 65.0% | |
CCTTGGCAGGCCTGGTCATC+AGG | - | chr2.1:8888302-8888321 | None:intergenic | 65.0% | |
GAGGTCGTAGAACTGCCGCG+TGG | + | chr2.1:8888656-8888675 | MS.gene028716:intron | 65.0% | |
GGCCAGCAGGCTGTGCAGAT+TGG | - | chr2.1:8887800-8887819 | None:intergenic | 65.0% | |
TCTTGGTACGCCACGAGCGG+TGG | + | chr2.1:8888879-8888898 | MS.gene028716:intron | 65.0% | |
! | CCGATGACGGTGTGCGCAAC+TGG | + | chr2.1:8887673-8887692 | MS.gene028716:CDS | 65.0% |
! | GAGGCCGAGGCACCAGAAGA+TGG | - | chr2.1:8887993-8888012 | None:intergenic | 65.0% |
! | GGCCGAGGCACCAGAAGATG+GGG | - | chr2.1:8887991-8888010 | None:intergenic | 65.0% |
! | TAGACCGCACCGGTAGAGGC+GGG | + | chr2.1:8888500-8888519 | MS.gene028716:intron | 65.0% |
!! | CAGGGGCGTTCACTGGTGCT+TGG | + | chr2.1:8888023-8888042 | MS.gene028716:CDS | 65.0% |
!! | CATGCTGCAGGGGCGTTCAC+TGG | + | chr2.1:8888016-8888035 | MS.gene028716:CDS | 65.0% |
CGCCACGAGCGGTGGAGGAA+AGG | + | chr2.1:8888887-8888906 | MS.gene028716:intron | 70.0% | |
GCAGCAGTGTTGCGGCCAGC+AGG | - | chr2.1:8887813-8887832 | None:intergenic | 70.0% | |
TGGTACGCCACGAGCGGTGG+AGG | + | chr2.1:8888882-8888901 | MS.gene028716:intron | 70.0% | |
! | ACGGCTAGGGCACTCAGGGG+AGG | + | chr2.1:8889248-8889267 | MS.gene028716:CDS | 70.0% |
! | AGACCGCACCGGTAGAGGCG+GGG | + | chr2.1:8888501-8888520 | MS.gene028716:intron | 70.0% |
GACCCCCGCCTCTACCGGTG+CGG | - | chr2.1:8888507-8888526 | None:intergenic | 75.0% | |
! | GACCGCACCGGTAGAGGCGG+GGG | + | chr2.1:8888502-8888521 | MS.gene028716:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 8887006 | 8889463 | 8887006 | ID=MS.gene028716 |
chr2.1 | mRNA | 8887006 | 8889463 | 8887006 | ID=MS.gene028716.t1;Parent=MS.gene028716 |
chr2.1 | exon | 8887006 | 8888223 | 8887006 | ID=MS.gene028716.t1.exon1;Parent=MS.gene028716.t1 |
chr2.1 | CDS | 8887006 | 8888223 | 8887006 | ID=cds.MS.gene028716.t1;Parent=MS.gene028716.t1 |
chr2.1 | exon | 8889120 | 8889361 | 8889120 | ID=MS.gene028716.t1.exon2;Parent=MS.gene028716.t1 |
chr2.1 | CDS | 8889120 | 8889361 | 8889120 | ID=cds.MS.gene028716.t1;Parent=MS.gene028716.t1 |
chr2.1 | exon | 8889457 | 8889463 | 8889457 | ID=MS.gene028716.t1.exon3;Parent=MS.gene028716.t1 |
chr2.1 | CDS | 8889457 | 8889463 | 8889457 | ID=cds.MS.gene028716.t1;Parent=MS.gene028716.t1 |
Gene Sequence |
Protein sequence |